+F Repair protein KO #

  DNA Repair and Recombination Proteins - Corynebacterium ureicelerivorans

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D CUREI_09250 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CUREI_04150 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CUREI_05515 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CUREI_03910 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E CUREI_09725 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E CUREI_00745 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E CUREI_03340 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D CUREI_04855 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CUREI_09990 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CUREI_03100 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CUREI_06950 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CUREI_11630 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D CUREI_09250 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CUREI_04150 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CUREI_00340 DNA methylase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] C BER (base exicision repair) D DNA glycosylases E CUREI_05515 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CUREI_05255 DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] E CUREI_03910 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E CUREI_09725 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E CUREI_03795 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E CUREI_07620 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E CUREI_03620 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] E CUREI_00745 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E CUREI_02135 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] E CUREI_09940 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ D DNA ligase E CUREI_05210 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E CUREI_05630 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E CUREI_05685 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E CUREI_07685 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E CUREI_05655 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E CUREI_06465 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E CUREI_02565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUREI_03650 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUREI_05630 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E CUREI_05210 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F CUREI_01495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F CUREI_01500 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F CUREI_01765 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F CUREI_06545 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F CUREI_04105 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases E CUREI_04270 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E CUREI_04265 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E CUREI_07800 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E CUREI_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E CUREI_08770 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E CUREI_00835 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E CUREI_05205 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUREI_00605 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUREI_03860 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUREI_07755 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUREI_00575 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E CUREI_05210 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E CUREI_02565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUREI_03650 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUREI_02975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E CUREI_04330 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E CUREI_11055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E CUREI_11510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E CUREI_07165 recombinase RecA K03553 recA; recombination protein RecA E CUREI_06750 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E CUREI_06745 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E CUREI_03010 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] E CUREI_11540 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] E CUREI_06515 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RecFOR pathway proteins E CUREI_07165 recombinase RecA K03553 recA; recombination protein RecA E CUREI_09710 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E CUREI_00015 recombinase RecF K03629 recF; DNA replication and repair protein RecF E CUREI_05525 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E CUREI_00880 DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E CUREI_08580 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E CUREI_00585 recombinase RecR K06187 recR; recombination protein RecR E CUREI_05835 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E CUREI_06750 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E CUREI_06745 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AddAB pathway proteins D Other HR factor E CUREI_11240 CRISPR-associated protein Cse1 K15342 cas1; CRISP-associated protein Cas1 D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex E CUREI_04560 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F CUREI_00055 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F CUREI_00025 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F CUREI_00825 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F CUREI_08580 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F CUREI_00585 recombinase RecR K06187 recR; recombination protein RecR F CUREI_05210 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F CUREI_10975 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F CUREI_05685 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F CUREI_07685 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F CUREI_05655 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D CUREI_07850 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D CUREI_07165 recombinase RecA K03553 recA; recombination protein RecA D CUREI_07065 ArsR family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D CUREI_05835 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CUREI_02005 DNA polymerase K14161 imuB; protein ImuB D CUREI_02045 DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CUREI_02975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CUREI_04330 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CUREI_11055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CUREI_11510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CUREI_07160 recombinase RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D CUREI_09195 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CUREI_03605 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D CUREI_04855 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CUREI_09990 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CUREI_05490 NTP pyrophosphohydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CUREI_05850 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CUREI_03100 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CUREI_06950 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CUREI_11630 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CUREI_09220 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CUREI_03090 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CUREI_11620 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CUREI_09210 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others D CUREI_07340 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024