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Transfer RNA Biogenesis - Crassostrea virginica (eastern oyster)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 111120769 ribonucleases P/MRP protein subunit POP1-like K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 111118082 ribonucleases P/MRP protein subunit POP1-like K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 111135868 ribonuclease P protein subunit p29-like isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 111131492 ribonuclease P/MRP protein subunit POP5-like K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 111110009 ribonuclease P protein subunit p30-like K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 111118330 ribonuclease P protein subunit rpr2-like K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D 111109555 ribonuclease P protein subunit p14-like K14529 RPP14; ribonuclease P protein subunit RPP14 [EC:3.1.26.5]
D 111109797 ribonuclease P protein subunit p14-like K14529 RPP14; ribonuclease P protein subunit RPP14 [EC:3.1.26.5]
D 111131247 ribonuclease P protein subunit p20-like K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
D 111130292 ribonuclease P protein subunit p20-like K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
D 111114829 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 111132778 ribonuclease P protein subunit p38-like K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
D 111134591 ribonuclease P protein subunit p38-like isoform X1 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
D 111137085 ribonuclease P protein subunit p40-like K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 111099174 zinc phosphodiesterase ELAC protein 1-like K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111130657 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111131106 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111131694 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111131830 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111132029 ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111110520 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111111533 ribonuclease Oy-like isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100037 ribonuclease T2-like isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100202 ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100203 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100204 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100205 intracellular ribonuclease LX-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111127412 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101748 ribonuclease-like storage protein isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101761 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101892 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101993 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111102302 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111118260 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein 1, mitochondrial-like K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
D 111131868 CCA tRNA nucleotidyltransferase 1, mitochondrial-like K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 111120126 LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 111124329 tRNA-splicing endonuclease subunit Sen34-like K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
D 111123590 uncharacterized protein LOC111123590 K15324 TSEN15; tRNA-splicing endonuclease subunit Sen15
C tRNA splicing ligase complex
D 111106677 tRNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D 111108816 tRNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D 111128235 UPF0568 protein C14orf166-like K15433 CGI99; RLL motif containing protein 1
D 111135819 ATP-dependent RNA helicase DDX1-like K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D 111117041 protein archease-like K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
D 111123132 tRNA 2'-phosphotransferase 1-like isoform X1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D 111123826 tRNA 2'-phosphotransferase 1-like isoform X1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
B tRNA transport factors
C tRNA export factors
D 111114937 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 111110088 exportin-T-like isoform X1 K14288 XPOT; exportin-T
D 111110572 exportin-T-like isoform X1 K14288 XPOT; exportin-T
D 111129825 exportin-1-like K14290 XPO1; exportin-1
D 111127225 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 111100129 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
D 111128709 LOW QUALITY PROTEIN: N-terminal kinase-like protein K08876 SCYL1; SCY1-like protein 1
D 111119685 GTP-binding protein 1-like K24887 GTPBP1; GTP-binding protein 1
C tRNA import factors
D 111104027 transportin-3-like isoform X1 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 111130105 bifunctional glutamate/proline--tRNA ligase-like K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D 111130240 bifunctional glutamate/proline--tRNA ligase-like K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D 111099857 probable glutamate--tRNA ligase, mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 111118635 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 111119354 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 111108055 isoleucine--tRNA ligase, cytoplasmic-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111108148 isoleucine--tRNA ligase, cytoplasmic-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111130116 isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111130233 isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111133426 probable leucine--tRNA ligase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111126003 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111099623 methionine--tRNA ligase, mitochondrial-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111136976 LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111110195 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 111110532 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 111125113 arginine--tRNA ligase, cytoplasmic-like K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111125541 arginine--tRNA ligase, cytoplasmic-like K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111136723 probable arginine--tRNA ligase, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111136015 LOW QUALITY PROTEIN: lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 111118963 aspartate--tRNA ligase, cytoplasmic-like K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 111135543 aspartate--tRNA ligase, mitochondrial-like K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 111125781 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D 111125822 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D 111120848 aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2
D 111121604 eukaryotic translation elongation factor 1 epsilon-1-like K15439 EEF1E1; eukaryotic translation elongation factor 1 epsilon-1
C Other AARSs
D 111135733 alanine--tRNA ligase, cytoplasmic-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111129859 LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111124379 LOW QUALITY PROTEIN: probable asparagine--tRNA ligase, mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111128976 asparagine--tRNA ligase, cytoplasmic-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111115725 glycine--tRNA ligase-like K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 111128617 LOW QUALITY PROTEIN: threonine--tRNA ligase, cytoplasmic-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111130118 threonine--tRNA ligase, cytoplasmic-like isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111130709 serine--tRNA ligase, mitochondrial-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111110313 serine--tRNA ligase, cytoplasmic-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111118652 cysteine--tRNA ligase, cytoplasmic-like isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111119553 cysteine--tRNA ligase, cytoplasmic-like isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111123900 LOW QUALITY PROTEIN: valine--tRNA ligase-like K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111125665 valine--tRNA ligase-like isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111125723 LOW QUALITY PROTEIN: histidine--tRNA ligase, cytoplasmic-like K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 111118665 phenylalanine--tRNA ligase alpha subunit-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111119430 phenylalanine--tRNA ligase alpha subunit-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111130025 phenylalanine--tRNA ligase, mitochondrial-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111133148 phenylalanine--tRNA ligase beta subunit-like K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 111120899 tyrosine--tRNA ligase, mitochondrial-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111101832 tyrosine--tRNA ligase, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111125186 tryptophan--tRNA ligase, cytoplasmic-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111125817 tryptophan--tRNA ligase, cytoplasmic-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111101460 tryptophan--tRNA ligase, mitochondrial-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111104253 tryptophan--tRNA ligase, mitochondrial-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111130020 tryptophan--tRNA ligase, cytoplasmic-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 111130904 D-tyrosyl-tRNA(Tyr) deacylase 1-like K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 111129835 probable D-tyrosyl-tRNA(Tyr) deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 111135999 alanyl-tRNA editing protein Aarsd1-like K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
C AARS associated factors
D 111120696 tRNA selenocysteine 1-associated protein 1-like isoform X1 K25102 TRNAU1AP; tRNA selenocysteine 1-associated protein 1
D 111101472 uncharacterized protein LOC111101472 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 111104329 uncharacterized protein LOC111104329 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 111115069 histidine triad nucleotide-binding protein 1-like K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 111115480 histidine triad nucleotide-binding protein 1-like K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 111119139 LOW QUALITY PROTEIN: histidine triad nucleotide-binding protein 3-like K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
D 111134872 tRNA-specific adenosine deaminase 1-like isoform X1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 111135888 tRNA-specific adenosine deaminase 2-like isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 111124404 LOW QUALITY PROTEIN: probable inactive tRNA-specific adenosine deaminase-like protein 3 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 111122265 LOW QUALITY PROTEIN: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 111136468 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 111114902 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
D 111107450 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
D 111109651 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
C Methylthiotransferase
D 111122052 threonylcarbamoyladenosine tRNA methylthiotransferase-like K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 111127752 tRNA (guanine(26)-N(2))-dimethyltransferase-like K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 111128379 tRNA (guanine(26)-N(2))-dimethyltransferase-like K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 111099056 tRNA (uracil-5-)-methyltransferase homolog A-like K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 111099097 tRNA (uracil-5-)-methyltransferase homolog A-like K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 111130925 probable methyltransferase TARBP1 isoform X1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 111135283 LOW QUALITY PROTEIN: tRNA (cytosine(34)-C(5))-methyltransferase-like K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
D 111114461 putative methyltransferase NSUN6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 111114679 putative methyltransferase NSUN6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 111129736 LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase-like K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 111128289 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 111130826 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 111130880 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 111100044 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 111110900 tRNA (guanine-N(7)-)-methyltransferase-like K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 111102639 methyltransferase-like protein 6 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 111104199 methyltransferase-like protein 6 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 111123031 LOW QUALITY PROTEIN: alkylated DNA repair protein alkB homolog 8-like K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 111123352 tRNA methyltransferase 10 homolog B-like K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 111125614 tRNA methyltransferase 10 homolog B-like K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 111119708 tRNA (guanine(9)-N1)-methyltransferase-like isoform X1 K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 111100372 tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1 K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 111132863 probable tRNA (uracil-O(2)-)-methyltransferase K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
D 111136725 probable tRNA (uracil-O(2)-)-methyltransferase K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
D 111107934 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4-like K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 111104489 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like isoform X1 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 111126133 LOW QUALITY PROTEIN: multifunctional methyltransferase subunit TRM112-like protein K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 111125611 tRNA (cytosine(38)-C(5))-methyltransferase-like K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 111127566 tRNA (cytosine(38)-C(5))-methyltransferase-like K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 111127924 tRNA (adenine(37)-N6)-methyltransferase-like K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 111130188 tRNA (adenine(37)-N6)-methyltransferase-like K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 111128345 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 111131527 tRNA wybutosine-synthesizing protein 2 homolog K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D 111120553 tRNA wybutosine-synthesizing protein 3 homolog K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 111099724 tRNA wybutosine-synthesizing protein 4-like K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D 111101178 tRNA wybutosine-synthesizing protein 4-like K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D 111109720 tRNA wybutosine-synthesizing protein 5-like K18066 TYW5; tRNA wybutosine-synthesizing protein 5 [EC:1.14.11.42]
C Psudouridine synthases
D 111133504 tRNA pseudouridine synthase A, mitochondrial-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111105897 pseudouridylate synthase 7 homolog K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 111129080 putative tRNA pseudouridine synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
C Thiolation factors
D 111108698 mitochondrial tRNA-specific 2-thiouridylase 1-like K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 111099625 cytoplasmic tRNA 2-thiolation protein 1-like K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 111099660 cytoplasmic tRNA 2-thiolation protein 1-like K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 111134884 cytoplasmic tRNA 2-thiolation protein 2-like isoform X1 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 111136090 cysteine desulfurase, mitochondrial-like K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 111126179 ubiquitin-related modifier 1-like K12161 URM1; ubiquitin related modifier 1
D 111130526 LOW QUALITY PROTEIN: adenylyltransferase and sulfurtransferase MOCS3-like K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 111136727 TP53-regulating kinase-like isoform X1 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 111134863 probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 111114632 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 111106296 EKC/KEOPS complex subunit Tprkb-like K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 111108009 EKC/KEOPS complex subunit Tprkb-like K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 111113271 EKC/KEOPS complex subunit LAGE3-like K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
C Elongator complex
D 111129366 putative elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 111130366 putative elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 111111424 elongator complex protein 2-like K11374 ELP2; elongator complex protein 2
D 111113426 elongator complex protein 2-like isoform X1 K11374 ELP2; elongator complex protein 2
D 111118089 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 111102393 elongator complex protein 4-like isoform X1 K11375 ELP4; elongator complex protein 4
D 111138490 elongator complex protein 5-like isoform X1 K11376 ELP5; elongator complex protein 5
D 111121289 LOW QUALITY PROTEIN: elongator complex protein 6-like K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 111105954 protein KTI12 homolog K15456 KTI12; protein KTI12
D 111109807 protein KTI12 homolog K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 111102573 yrdC domain-containing protein, mitochondrial-like K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 111104209 yrdC domain-containing protein, mitochondrial-like K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 111121427 tRNA dimethylallyltransferase, mitochondrial-like isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 111119998 LOW QUALITY PROTEIN: tRNA modification GTPase GTPBP3, mitochondrial-like K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 111136444 protein MTO1 homolog, mitochondrial-like K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 111125631 queuine tRNA-ribosyltransferase catalytic subunit 1-like K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 111125966 queuine tRNA-ribosyltransferase accessory subunit 2-like isoform X1 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 111107520 selenide, water dikinase-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 111110368 selenide, water dikinase-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 111118362 THUMP domain-containing protein 1-like isoform X1 K06963 TAN1; tRNA acetyltransferase TAN1
D 111102241 probable tRNA(His) guanylyltransferase K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 111105590 LOW QUALITY PROTEIN: arginyl-tRNA--protein transferase 1-like K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 111107847 DALR anticodon-binding domain-containing protein 3-like isoform X1 K24973 DALRD3; DALR anticodon-binding domain-containing protein 3
D 111108263 DALR anticodon-binding domain-containing protein 3-like K24973 DALRD3; DALR anticodon-binding domain-containing protein 3
B tRNA degradation factors
C TRAMP complex
D 111135552 non-canonical poly(A) RNA polymerase PAPD5-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 111118184 zinc finger CCHC domain-containing protein 7-like K12597 AIR1_2; protein AIR1/2
D 111118356 zinc finger CCHC domain-containing protein 7-like K12597 AIR1_2; protein AIR1/2
D 111121481 superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 111119263 superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 111135353 LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 111130565 5'-3' exoribonuclease 2-like isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 111130755 5'-3' exoribonuclease 2-like isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 111128712 3'(2'),5'-bisphosphate nucleotidase 1-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 111099174 zinc phosphodiesterase ELAC protein 1-like K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111130657 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111131106 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111131694 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111131830 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111132029 ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111110520 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111111533 ribonuclease Oy-like isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100037 ribonuclease T2-like isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100202 ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100203 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100204 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111100205 intracellular ribonuclease LX-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111127412 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101748 ribonuclease-like storage protein isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101761 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101892 ribonuclease Oy-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111101993 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111102302 ribonuclease-like storage protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D 111131868 CCA tRNA nucleotidyltransferase 1, mitochondrial-like K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D 111106677 tRNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D 111108816 tRNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 111133426 probable leucine--tRNA ligase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111126003 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111118635 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 111119354 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 111120899 tyrosine--tRNA ligase, mitochondrial-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111101832 tyrosine--tRNA ligase, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111125186 tryptophan--tRNA ligase, cytoplasmic-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111125817 tryptophan--tRNA ligase, cytoplasmic-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111101460 tryptophan--tRNA ligase, mitochondrial-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111104253 tryptophan--tRNA ligase, mitochondrial-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111130020 tryptophan--tRNA ligase, cytoplasmic-like K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111128617 LOW QUALITY PROTEIN: threonine--tRNA ligase, cytoplasmic-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111130118 threonine--tRNA ligase, cytoplasmic-like isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111108055 isoleucine--tRNA ligase, cytoplasmic-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111108148 isoleucine--tRNA ligase, cytoplasmic-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111130116 isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111130233 isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111136015 LOW QUALITY PROTEIN: lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 111135733 alanine--tRNA ligase, cytoplasmic-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111129859 LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111123900 LOW QUALITY PROTEIN: valine--tRNA ligase-like K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111125665 valine--tRNA ligase-like isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111099623 methionine--tRNA ligase, mitochondrial-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111136976 LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111130709 serine--tRNA ligase, mitochondrial-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111110313 serine--tRNA ligase, cytoplasmic-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111135543 aspartate--tRNA ligase, mitochondrial-like K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 111118652 cysteine--tRNA ligase, cytoplasmic-like isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111119553 cysteine--tRNA ligase, cytoplasmic-like isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111099857 probable glutamate--tRNA ligase, mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 111110195 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 111110532 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 111125113 arginine--tRNA ligase, cytoplasmic-like K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111125541 arginine--tRNA ligase, cytoplasmic-like K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111136723 probable arginine--tRNA ligase, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111118665 phenylalanine--tRNA ligase alpha subunit-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111119430 phenylalanine--tRNA ligase alpha subunit-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111130025 phenylalanine--tRNA ligase, mitochondrial-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111133148 phenylalanine--tRNA ligase beta subunit-like K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 111125723 LOW QUALITY PROTEIN: histidine--tRNA ligase, cytoplasmic-like K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 111124379 LOW QUALITY PROTEIN: probable asparagine--tRNA ligase, mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111128976 asparagine--tRNA ligase, cytoplasmic-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 111130904 D-tyrosyl-tRNA(Tyr) deacylase 1-like K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 111129835 probable D-tyrosyl-tRNA(Tyr) deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 111135999 alanyl-tRNA editing protein Aarsd1-like K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferases
C Methyltransferases
D 111110900 tRNA (guanine-N(7)-)-methyltransferase-like K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 111119998 LOW QUALITY PROTEIN: tRNA modification GTPase GTPBP3, mitochondrial-like K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 111127924 tRNA (adenine(37)-N6)-methyltransferase-like K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 111130188 tRNA (adenine(37)-N6)-methyltransferase-like K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 111133504 tRNA pseudouridine synthase A, mitochondrial-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111105897 pseudouridylate synthase 7 homolog K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 111136090 cysteine desulfurase, mitochondrial-like K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 111136727 TP53-regulating kinase-like isoform X1 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 111134863 probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 111114632 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 111136444 protein MTO1 homolog, mitochondrial-like K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 111121427 tRNA dimethylallyltransferase, mitochondrial-like isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 111129926 6-pyruvoyl tetrahydrobiopterin synthase-like K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D 111130403 6-pyruvoyl tetrahydrobiopterin synthase-like K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D 111107520 selenide, water dikinase-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 111110368 selenide, water dikinase-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 111102573 yrdC domain-containing protein, mitochondrial-like K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 111104209 yrdC domain-containing protein, mitochondrial-like K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
B tRNA degradation factors
C 111131750 polyribonucleotide nucleotidyltransferase 1, mitochondrial-like K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024