+E
#
Transcription Machinery - Pseudodesulfovibrio aespoeensis
%
!
AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E Daes_2228 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E Daes_2260 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E Daes_2259 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E Daes_1371 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E Daes_1504 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E Daes_2870 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Daes_1586 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Daes_3133 RNA polymerase sigma factor, sigma-70 family K03089 rpoH; RNA polymerase sigma-32 factor
E Daes_1475 RNA polymerase sigma-54 factor, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
E Daes_1362 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E Daes_2143 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E Daes_2820 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E Daes_2265 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
E Daes_0270 Stage II sporulation protein E K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Daes_0646 Stage II sporulation protein E K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Daes_0559 Stage II sporulation protein E K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Daes_2956 Stage II sporulation protein E K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Daes_3225 PAS sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Daes_1900 Stage II sporulation protein E K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Daes_0557 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E Daes_3226 Sulfate transporter/antisigma-factor antagonist STAS K04749 rsbV; anti-sigma B factor antagonist
E Daes_2957 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E Daes_0558 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E Daes_3227 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E Daes_2958 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E Daes_0760 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
E Daes_1917 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
E Daes_3093 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
E Daes_2683 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E Daes_0876 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024