+D GENES KO
#
KEGG Orthology (KO) - Candidatus Desulforudis audaxviator
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dau00010]
D Daud_0297 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_1116 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Daud_2175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Daud_1839 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Daud_0304 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Daud_0302 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_0881 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_1270 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_0303 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Daud_0305 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Daud_1058 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Daud_0306 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Daud_1056 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Daud_1926 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Daud_1946 Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_1608 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_2075 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_1607 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Daud_1522 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Daud_0895 ATP-grasp domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Daud_1563 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:dau00020]
D Daud_1038 Isocitrate dehydrogenase (NAD(+)) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D Daud_1608 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_2075 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_1607 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Daud_1606 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Daud_2073 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Daud_1609 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Daud_2072 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Daud_1930 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1931 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1929 fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D Daud_1254 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Daud_1927 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Daud_1253 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Daud_1928 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Daud_1563 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:dau00030]
D Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Daud_1586 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Daud_2077 Transketolase, central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Daud_2078 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Daud_2174 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Daud_2148 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Daud_1239 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Daud_1281 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Daud_0069 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Daud_0135 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Daud_0279 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Daud_2175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Daud_1839 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_1116 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:dau00040]
D Daud_2091 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Daud_1586 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Daud_0650 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:dau00051]
D Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Daud_0863 Mannose-1-phosphate guanylyltransferase (GDP), Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Daud_1040 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Daud_0650 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_1116 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Daud_2175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Daud_1839 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Daud_0304 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Daud_2148 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:dau00052]
D Daud_1323 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Daud_1657 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Daud_2091 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Daud_0297 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_1116 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Daud_0015 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:dau00500]
D Daud_0015 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Daud_2091 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Daud_1322 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Daud_1045 glycoside hydrolase, family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Daud_0851 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Daud_0866 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Daud_1656 HAD-superfamily hydrolase, subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Daud_1655 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Daud_0297 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Daud_0268 protein of unknown function UPF0131
D Daud_1039 glycosyl transferase, group 1
C 00620 Pyruvate metabolism [PATH:dau00620]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_1608 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_2075 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_1607 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Daud_1056 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Daud_1054 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Daud_1016 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Daud_1053 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Daud_1158 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Daud_0895 ATP-grasp domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Daud_1522 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Daud_0903 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Daud_1015 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Daud_1254 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Daud_1927 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Daud_1253 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Daud_1928 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Daud_1930 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1931 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1929 fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D Daud_0773 protein of unknown function DUF557 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Daud_1563 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Daud_1926 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Daud_1946 Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Daud_0355 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Daud_0358 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Daud_0409 pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
D Daud_1035 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dau00630]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Daud_2023 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2027 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2030 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2147 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Daud_1580 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Daud_1581 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Daud_0134 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Daud_0369 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Daud_1579 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Daud_1941 (Ni/Fe) hydrogenase, b-type cytochrome subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Daud_1043 4Fe-4S ferredoxin, iron-sulfur binding domain protein
C 00640 Propanoate metabolism [PATH:dau00640]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Daud_0895 ATP-grasp domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_1054 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Daud_1016 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Daud_1053 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Daud_1522 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:dau00650]
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Daud_1930 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1931 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1929 fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_1608 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_2075 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_1607 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Daud_0352 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Daud_0353 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:dau00660]
D Daud_0352 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Daud_0353 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Daud_0356 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Daud_1036 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Daud_0357 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Daud_1037 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Daud_1279 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D Daud_0304 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dau00190]
D Daud_1339 NADH dehydrogenase (ubiquinone), 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Daud_1924 NADH dehydrogenase (ubiquinone), 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Daud_0157 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Daud_1337 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Daud_1930 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1931 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1929 fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D Daud_2102 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Daud_2139 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Daud_2137 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Daud_2138 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Daud_2140 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Daud_2136 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Daud_2143 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Daud_2141 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Daud_2142 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Daud_1840 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Daud_0348 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D Daud_0525 HAD-superfamily hydrolase, subfamily IA, variant 3 K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:dau00710]
D Daud_0303 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Daud_0302 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_0881 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_1270 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_2175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Daud_2077 Transketolase, central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Daud_2078 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Daud_2148 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Daud_0304 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Daud_1586 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Daud_2174 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Daud_0773 protein of unknown function DUF557 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Daud_1563 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Daud_1926 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:dau00720]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_1946 Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Daud_1926 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Daud_0773 protein of unknown function DUF557 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Daud_1254 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Daud_1927 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Daud_1253 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Daud_1928 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Daud_1930 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1931 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D Daud_1929 fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D Daud_1608 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_2075 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Daud_1607 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Daud_1606 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Daud_2073 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Daud_1609 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Daud_2072 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Daud_1054 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Daud_1016 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Daud_1053 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Daud_0104 formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D Daud_0089 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Daud_0118 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Daud_0103 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Daud_1022 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Daud_1023 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Daud_0117 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Daud_0880 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Daud_0113 dihydropteroate synthase, DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D Daud_0876 dihydropteroate synthase, DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D Daud_0870 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Daud_0871 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D Daud_0112 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D Daud_0872 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D Daud_0114 corrinoid/iron-sulfur protein, small subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D Daud_0875 CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:dau00680]
D Daud_1580 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Daud_1581 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Daud_0134 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Daud_0369 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Daud_1579 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Daud_1941 (Ni/Fe) hydrogenase, b-type cytochrome subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Daud_0567 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D Daud_0104 formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D Daud_0105 CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit K00192 cdhA; anaerobic carbon-monoxide dehydrogenase, CODH/ACS complex subunit alpha [EC:1.2.7.4]
D Daud_0106 CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit K00195 cdhB; anaerobic carbon-monoxide dehydrogenase, CODH/ACS complex subunit epsilon
D Daud_0111 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit K00193 cdhC; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit beta [EC:2.3.1.169]
D Daud_0112 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D Daud_0872 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D Daud_0114 corrinoid/iron-sulfur protein, small subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D Daud_0875 CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D Daud_0870 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Daud_2147 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Daud_0306 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Daud_0773 protein of unknown function DUF557 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Daud_2175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Daud_1839 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_1116 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Daud_1104 formylmethanofuran dehydrogenase, subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D Daud_0092 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_0565 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_0877 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_0564 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_1251 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_1881 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_0563 putative heterodisulfide reductase, C subunit K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_1252 Heterodisulfide reductase subunit C-like protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_1882 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Daud_0115 methyl-viologen-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Daud_0566 methyl-viologen-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Daud_0878 methyl-viologen-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Daud_1653 methyl-viologen-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Daud_1651 nickel-dependent hydrogenase, large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5]
D Daud_1652 NADH ubiquinone oxidoreductase, 20 kDa subunit K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_1946 Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Daud_0305 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Daud_1058 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Daud_0012 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Daud_0825 phosphoserine phosphatase-like hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Daud_1067 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Daud_1309 Phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D Daud_1043 4Fe-4S ferredoxin, iron-sulfur binding domain protein
C 00910 Nitrogen metabolism [PATH:dau00910]
D Daud_0146 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Daud_0147 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Daud_0143 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Daud_2023 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2027 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2030 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_0551 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:dau00920]
D Daud_1076 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_1078 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_0928 phosphoesterase, RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Daud_0788 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Daud_1885 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Daud_1889 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Daud_0789 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Daud_1886 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Daud_0799 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Daud_1702 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Daud_2201 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Daud_2200 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Daud_2192 conserved hypothetical protein K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D Daud_2191 protein of unknown function DUF224, cysteine-rich region domain protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D Daud_0187 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Daud_1888 4Fe-4S ferredoxin, iron-sulfur binding domain protein
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dau00061]
D Daud_1054 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Daud_1016 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Daud_1053 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Daud_0643 acyl carrier protein K02078 acpP; acyl carrier protein
D Daud_0641 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Daud_0639 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Daud_0644 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Daud_0674 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Daud_0642 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Daud_2093 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Daud_0640 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:dau00074]
D Daud_0470 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Daud_0643 acyl carrier protein K02078 acpP; acyl carrier protein
D Daud_0641 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dau00561]
D Daud_0638 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Daud_1171 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Daud_1179 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Daud_1727 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Daud_1106 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:dau00564]
D Daud_1168 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Daud_1171 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Daud_1179 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Daud_1727 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Daud_0611 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dau00230]
D Daud_1325 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Daud_1281 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Daud_0069 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Daud_1632 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Daud_1628 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Daud_1630 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Daud_1169 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Daud_1170 phosphoribosylformylglycinamidine synthase II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D Daud_1631 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Daud_1972 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Daud_1973 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Daud_1633 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Daud_1634 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Daud_1629 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Daud_1231 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Daud_1420 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Daud_1636 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Daud_1070 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Daud_0088 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Daud_1504 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Daud_1635 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Daud_1597 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Daud_1269 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Daud_1995 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Daud_0490 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Daud_0901 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Daud_0084 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Daud_2209 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Daud_1062 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Daud_1111 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Daud_1871 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Daud_1076 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_1078 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:dau00240]
D Daud_1302 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Daud_1774 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Daud_1303 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Daud_1305 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Daud_1304 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Daud_1300 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Daud_1301 Oxidoreductase FAD-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Daud_0006 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Daud_1299 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Daud_0608 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Daud_0088 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Daud_1468 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Daud_2180 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Daud_1180 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Daud_1231 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Daud_1306 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Daud_1062 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Daud_1280 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Daud_2046 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Daud_1995 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Daud_1269 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Daud_1943 CMP/dCMP deaminase, zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Daud_0036 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Daud_0937 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Daud_0189 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dau00250]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_0122 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Daud_0140 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Daud_0560 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Daud_0162 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D Daud_0344 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Daud_0345 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Daud_2209 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Daud_1634 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Daud_1305 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Daud_0551 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Daud_2023 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2027 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2030 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_1302 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Daud_1774 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Daud_1303 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Daud_1169 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Daud_0360 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Daud_1632 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dau00260]
D Daud_1075 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Daud_0945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Daud_1073 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Daud_1074 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Daud_0281 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Daud_2147 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Daud_0305 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Daud_1058 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Daud_0012 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Daud_0825 phosphoserine phosphatase-like hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Daud_1067 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Daud_0066 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Daud_1185 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Daud_1186 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Daud_1205 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:dau00270]
D Daud_0187 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Daud_1996 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Daud_2084 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Daud_1085 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Daud_1979 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Daud_1420 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Daud_0651 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Daud_0647 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Daud_0648 putative translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Daud_0649 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Daud_1075 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Daud_0945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Daud_1073 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Daud_1074 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Daud_0911 protein of unknown function DUF39 K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D Daud_0910 4Fe-4S ferredoxin, iron-sulfur binding domain protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D Daud_0351 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_2032 Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1522 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Daud_1121 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Daud_1311 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Daud_0012 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:dau00280]
D Daud_0351 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_2032 Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dau00290]
D Daud_0066 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Daud_0356 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Daud_1036 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Daud_0357 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Daud_1037 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Daud_1279 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Daud_0352 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Daud_0353 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Daud_0354 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Daud_0540 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Daud_0351 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_2032 Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_0355 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Daud_0358 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:dau00300]
D Daud_1073 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Daud_1075 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Daud_0945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Daud_0946 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Daud_0942 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Daud_0342 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Daud_1604 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Daud_1603 aminotransferase, class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Daud_1204 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Daud_1441 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Daud_1440 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:dau00310]
D Daud_0653 aminotransferase class-III K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Daud_0171 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:dau00220]
D Daud_0343 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Daud_0344 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Daud_0345 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Daud_1169 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Daud_2023 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2027 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2030 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_1302 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Daud_1774 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Daud_1303 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1142 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Daud_0340 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Daud_0341 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Daud_0339 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Daud_0342 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:dau00330]
D Daud_0035 Orn/Lys/Arg decarboxylase, major region K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Daud_1980 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Daud_1978 putative agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Daud_1979 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Daud_1085 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Daud_0653 aminotransferase class-III K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Daud_1412 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Daud_1872 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Daud_1870 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:dau00340]
D Daud_0083 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Daud_1621 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Daud_1623 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Daud_1624 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Daud_1622 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Daud_1625 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Daud_1184 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1626 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1449 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Daud_1627 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:dau00350]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1184 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1626 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:dau00360]
D Daud_1573 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Daud_1574 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1184 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1626 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dau00400]
D Daud_1183 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Daud_1905 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Daud_0990 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Daud_1003 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Daud_0987 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Daud_0989 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Daud_1181 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Daud_0988 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Daud_1191 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Daud_1190 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Daud_1189 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Daud_1187 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Daud_1188 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Daud_1185 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Daud_1186 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Daud_1205 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Daud_1194 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D Daud_1182 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Daud_1904 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1184 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1626 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:dau00410]
D Daud_0102 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Daud_0120 hypothetical protein K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Daud_0101 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:dau00450]
D Daud_1996 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Daud_0559 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Daud_1139 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Daud_1076 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_1078 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_1535 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Daud_1987 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Daud_1093 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Daud_0041 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Daud_2147 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dau00470]
D Daud_0472 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Daud_1240 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Daud_1169 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Daud_1508 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Daud_1438 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Daud_1604 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Daud_1204 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:dau00480]
D Daud_1979 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dau00520]
D Daud_0068 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Daud_2146 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Daud_1433 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Daud_2202 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Daud_1434 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Daud_0359 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Daud_0360 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Daud_1776 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D Daud_0297 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Daud_2091 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Daud_1323 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Daud_1657 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Daud_0863 Mannose-1-phosphate guanylyltransferase (GDP), Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Daud_1040 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Daud_1687 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:dau00541]
D Daud_0068 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Daud_1778 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]
D Daud_2146 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Daud_2091 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Daud_1687 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Daud_1685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Daud_1688 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Daud_1686 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Daud_1040 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:dau00542]
D Daud_2092 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:dau00550]
D Daud_1433 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Daud_2202 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Daud_1434 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Daud_1435 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Daud_1438 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Daud_1441 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Daud_1240 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Daud_1440 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Daud_0610 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Daud_0835 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Daud_1439 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Daud_1436 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Daud_1369 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Daud_1437 stage V sporulation protein E K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_1459 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_1463 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Daud_1442 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Daud_1227 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1398 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1877 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_0588 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Daud_0589 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:dau00552]
D Daud_0835 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Daud_2092 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Daud_2098 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Daud_2095 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Daud_1106 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D Daud_2092 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:dau00543]
D Daud_2092 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Daud_0187 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dau00730]
D Daud_2018 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Daud_0907 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Daud_0163 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Daud_1027 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Daud_0859 thiazole biosynthesis enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D Daud_0479 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Daud_2019 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Daud_2017 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Daud_1587 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Daud_1111 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:dau00740]
D Daud_0625 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Daud_0623 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Daud_0626 Riboflavin synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Daud_0624 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Daud_0930 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Daud_0479 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Daud_1325 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Daud_0482 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:dau00750]
D Daud_0281 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Daud_0009 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Daud_0010 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dau00760]
D Daud_0122 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Daud_0121 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Daud_0123 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Daud_1231 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Daud_1868 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Daud_1366 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Daud_0150 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Daud_0098 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Daud_1029 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:dau00770]
D Daud_0352 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Daud_0353 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Daud_0354 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Daud_0540 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Daud_0100 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Daud_0101 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Daud_0126 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Daud_1595 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Daud_0633 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Daud_1406 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Daud_0470 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Daud_0351 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_2032 Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_0102 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Daud_0120 hypothetical protein K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:dau00780]
D Daud_1330 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Daud_0644 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Daud_0674 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Daud_0642 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Daud_2093 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Daud_1326 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Daud_1328 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Daud_1327 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Daud_0166 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Daud_1331 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Daud_0125 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:dau00790]
D Daud_1233 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Daud_0096 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Daud_0097 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Daud_0095 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Daud_1472 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Daud_0625 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Daud_2033 para-aminobenzoate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Daud_1237 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Daud_1234 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Daud_1236 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Daud_1155 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Daud_0621 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Daud_1893 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Daud_1891 molybdenum cofactor synthesis domain K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Daud_1894 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Daud_1895 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Daud_0985 molybdopterin-guanine dinucleotide biosynthesis protein B K13818 mobAB; molybdopterin-guanine dinucleotide biosynthesis protein [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:dau00670]
D Daud_0089 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Daud_0118 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Daud_0103 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Daud_1022 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Daud_1023 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Daud_2147 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Daud_1630 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Daud_1629 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Daud_0189 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Daud_0117 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Daud_0880 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Daud_2011 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D Daud_2084 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Daud_0649 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dau00860]
D Daud_1348 Shikimate/quinate 5-dehydrogenase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Daud_1340 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Daud_1344 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Daud_1347 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Daud_1346 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Daud_1349 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Daud_1857 cobalamin (vitamin B12) biosynthesis CbiX protein K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]
D Daud_1341 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Daud_1342 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Daud_1345 Radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase
D Daud_1343 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D Daud_2102 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Daud_1854 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Daud_1851 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Daud_1853 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Daud_1852 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Daud_1856 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Daud_1850 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Daud_2189 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Daud_1210 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Daud_1219 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Daud_0043 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Daud_1848 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Daud_1847 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Daud_1312 cobalbumin biosynthesis enzyme K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Daud_1313 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Daud_1314 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Daud_1849 Histidinol-phosphate transaminase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Daud_1209 Magnesium chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Daud_1208 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dau00130]
D Daud_1088 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Daud_0482 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Daud_1087 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Daud_1090 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D Daud_1089 Radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D Daud_0261 conserved hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D Daud_1091 Radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D Daud_0260 protein of unknown function DUF191 K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dau00900]
D Daud_1027 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Daud_0615 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Daud_0186 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D Daud_0058 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Daud_0617 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Daud_1178 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D Daud_0482 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Daud_1025 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Daud_1350 Trans-hexaprenyltranstransferase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D Daud_0610 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Daud_1086 hypothetical protein
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Daud_2077 Transketolase, central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Daud_2078 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:dau00523]
D Daud_1687 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Daud_1685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Daud_1688 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Daud_1686 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Daud_1685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:dau00332]
D Daud_1872 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Daud_1870 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:dau00261]
D Daud_1076 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_1078 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Daud_1075 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Daud_0945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Daud_0946 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Daud_0942 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:dau00521]
D Daud_0297 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Daud_1687 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Daud_1685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Daud_1688 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Daud_1686 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Daud_0297 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:dau00525]
D Daud_1687 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Daud_1685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:dau00401]
D Daud_1182 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1184 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1626 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Daud_1191 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Daud_1190 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Daud_0641 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Daud_0642 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Daud_0643 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:dau00999]
D Daud_2084 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Daud_0987 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation [PATH:dau00627]
D Daud_1158 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Daud_0168 UbiD family decarboxylase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61]
D Daud_0482 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:dau00625]
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Daud_0147 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Daud_0143 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Daud_0146 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:dau00633]
D Daud_1940 Hydrogen:quinone oxidoreductase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Daud_1041 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Daud_1939 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Daud_0870 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1966 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Daud_1961 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1965 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Daud_1964 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Daud_1963 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Daud_2201 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Daud_2200 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:dau00626]
D Daud_2043 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dau03020]
D Daud_0216 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Daud_0217 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Daud_0253 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Daud_1596 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dau03010]
D Daud_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Daud_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Daud_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Daud_R0031 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Daud_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Daud_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Daud_1178 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D Daud_0606 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Daud_0231 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Daud_0252 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4
D Daud_0242 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Daud_2216 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Daud_0221 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Daud_0239 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Daud_0331 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Daud_0224 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Daud_0251 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Daud_0220 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Daud_0250 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Daud_0238 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Daud_0933 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Daud_0656 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Daud_0234 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Daud_2214 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Daud_0229 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Daud_2067 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Daud_2051 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Daud_0212 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Daud_0228 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Daud_0225 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Daud_0226 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Daud_0237 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Daud_0240 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Daud_0219 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D Daud_2212 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Daud_0213 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Daud_0211 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Daud_0214 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Daud_0330 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Daud_0235 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Daud_0244 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Daud_0232 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Daud_0254 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Daud_0241 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Daud_0661 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Daud_1381 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Daud_1452 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Daud_0230 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Daud_0227 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Daud_0236 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Daud_0070 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Daud_1451 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Daud_0627 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Daud_0233 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Daud_0243 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Daud_2156 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Daud_0637 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Daud_0208 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Daud_2238 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Daud_1382 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Daud_0249 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dau00970]
D Daud_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Daud_R0048 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Daud_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Daud_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Daud_R0051 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Daud_R0050 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Daud_R0037 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Daud_R0044 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Daud_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Daud_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Daud_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Daud_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Daud_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Daud_R0038 tRNA-His K14226 tRNA-His; tRNA His
D Daud_R0033 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Daud_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Daud_R0036 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Daud_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D Daud_R0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D Daud_R0052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Daud_R0022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Daud_R0026 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Daud_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Daud_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0011 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Daud_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Daud_R0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Daud_R0028 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Daud_R0021 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Daud_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val
D Daud_R0035 tRNA-Val K14237 tRNA-Val; tRNA Val
D Daud_R0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D Daud_R0023 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Daud_1531 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Daud_1033 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Daud_0379 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Daud_1034 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Daud_1032 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Daud_0912 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Daud_0906 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Daud_0484 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Daud_0485 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Daud_1384 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Daud_0013 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Daud_1093 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Daud_0188 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Daud_0041 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Daud_1592 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Daud_1473 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Daud_1865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Daud_1408 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Daud_0131 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Daud_2181 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Daud_0618 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Daud_0905 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Daud_1378 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Daud_1377 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Daud_1368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Daud_1201 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D Daud_0645 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dau03060]
D Daud_0245 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Daud_0209 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Daud_0307 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Daud_1356 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Daud_1355 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Daud_1358 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Daud_2235 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Daud_2080 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Daud_0655 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Daud_0646 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Daud_0312 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Daud_1117 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1118 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1119 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1120 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Daud_0662 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Daud_0948 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:dau04141]
D Daud_1492 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Daud_0454 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Daud_1122 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Daud_1333 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Daud_1494 conserved hypothetical protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dau04122]
D Daud_0907 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Daud_0063 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Daud_2035 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Daud_0621 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Daud_0278 thiamineS protein K03636 moaD; sulfur-carrier protein
D Daud_0277 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Daud_1893 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Daud_1891 molybdenum cofactor synthesis domain K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:dau03018]
D Daud_0306 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Daud_0934 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Daud_0329 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Daud_1397 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Daud_2173 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Daud_1061 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Daud_0808 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Daud_0947 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_2057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Daud_2007 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Daud_0557 RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dau03030]
D Daud_0562 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1567 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_2003 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1050 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Daud_0031 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Daud_0037 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Daud_2068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Daud_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Daud_2211 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Daud_0491 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Daud_2215 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Daud_1837 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Daud_0664 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Daud_1403 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Daud_1617 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dau03410]
D Daud_1404 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Daud_0290 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Daud_1530 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Daud_1981 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Daud_1403 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Daud_0900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Daud_1617 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dau03420]
D Daud_0072 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Daud_0294 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Daud_0293 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Daud_0295 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Daud_1619 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Daud_1403 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Daud_1617 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:dau03430]
D Daud_0553 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Daud_1373 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Daud_0554 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Daud_1619 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Daud_1021 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Daud_1024 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Daud_0900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Daud_2215 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Daud_1050 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Daud_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Daud_0031 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Daud_2068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Daud_0037 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Daud_0562 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1567 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_2003 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1617 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:dau03440]
D Daud_0900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Daud_2215 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Daud_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Daud_0483 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Daud_0033 recombination protein RecR K06187 recR; recombination protein RecR
D Daud_0843 recA protein K03553 recA; recombination protein RecA
D Daud_1403 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Daud_1363 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Daud_1362 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Daud_1364 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Daud_0818 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Daud_1393 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Daud_1050 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Daud_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Daud_0031 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Daud_2068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Daud_0037 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Daud_0562 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1567 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_2003 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1594 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:dau03450]
D Daud_0594 Ku domain protein K10979 ku; DNA end-binding protein Ku
D Daud_0596 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Daud_0598 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dau02010]
D Daud_1542 extracellular solute-binding protein, family 1 K05772 tupA; tungstate transport system substrate-binding protein
D Daud_1541 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein
D Daud_1540 ABC transporter related K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Daud_0310 ABC-transporter-like protein, periplasmic substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Daud_0410 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Daud_0411 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Daud_0412 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Daud_1909 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Daud_1956 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Daud_1959 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Daud_1958 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Daud_1416 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Daud_1135 extracellular solute-binding protein, family 3 K10036 glnH; glutamine transport system substrate-binding protein
D Daud_1136 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein
D Daud_1137 ABC transporter related K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Daud_0668 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_1131 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_1392 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_0669 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_1130 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_1391 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_0670 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_1129 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_1390 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_0671 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_1128 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_1389 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_0672 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_1127 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_1388 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_0833 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Daud_1547 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Daud_1546 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Daud_1860 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D Daud_0273 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Daud_1861 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Daud_0274 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Daud_1859 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Daud_0275 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Daud_1858 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Daud_1640 hypothetical protein K16915 cbiL; nickel transport protein
D Daud_2086 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Daud_0285 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Daud_0284 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:dau03070]
D Daud_0993 hypothetical protein K02456 gspG; general secretion pathway protein G
D Daud_1356 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Daud_1355 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Daud_0209 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Daud_0307 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Daud_0245 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Daud_1358 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Daud_2235 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Daud_2080 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Daud_0646 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Daud_0655 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Daud_1117 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1118 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1119 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1120 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Daud_0815 TRAG family protein
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dau02020]
D Daud_1418 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Daud_1419 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Daud_1956 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Daud_1880 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Daud_1781 flagellin domain protein K02406 fliC; flagellin
D Daud_1744 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D Daud_1794 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Daud_1898 multi-sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D Daud_1897 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D Daud_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Daud_1902 peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Daud_0530 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Daud_2177 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Daud_1615 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Daud_1257 response regulator receiver K11692 K11692; two-component system, CitB family, response regulator DctR
D Daud_0468 signal transduction histidine kinase, LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D Daud_0119 response regulator receiver protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D Daud_0469 response regulator receiver protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D Daud_0446 hypothetical protein K07813 agrB; accessory gene regulator B
D Daud_0141 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Daud_2023 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2027 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2030 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_0957 Tfp pilus assembly protein PilE K02650 pilA; type IV pilus assembly protein PilA
D Daud_1041 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Daud_1939 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Daud_1940 Hydrogen:quinone oxidoreductase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Daud_1740 Protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Daud_0680 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Daud_1561 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Daud_1560 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Daud_1793 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Daud_1792 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Daud_1738 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Daud_1791 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Daud_0783 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_1482 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_2039 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_2146 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Daud_1790 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
D Daud_1059 Superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dau02024]
D Daud_0557 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Daud_1191 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Daud_1190 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Daud_0668 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_1131 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_1392 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_0669 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_1130 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_1391 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_0670 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_1129 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_1390 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_0671 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_1128 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_1389 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_0672 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_1127 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_1388 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_0783 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_1482 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_2039 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_0623 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Daud_0056 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Daud_0446 hypothetical protein K07813 agrB; accessory gene regulator B
D Daud_0391 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Daud_1982 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Daud_0386 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Daud_0387 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Daud_0388 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Daud_0389 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Daud_2235 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Daud_0209 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Daud_0307 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Daud_0245 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Daud_1358 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Daud_2080 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Daud_0646 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Daud_0655 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Daud_2177 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Daud_1615 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Daud_2108 peptidase S8 and S53, subtilisin, kexin, sedolisin
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:dau02030]
D Daud_0680 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Daud_1561 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Daud_1792 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Daud_1560 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Daud_1793 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Daud_1738 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Daud_1739 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Daud_1791 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Daud_1741 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Daud_1740 Protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Daud_1764 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Daud_1737 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Daud_1736 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Daud_1755 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Daud_1794 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Daud_1795 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:dau02040]
D Daud_1766 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Daud_1765 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Daud_1764 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Daud_1763 Flagellar biosynthesis/type III secretory pathway protein-like protein K02411 fliH; flagellar assembly protein FliH
D Daud_1762 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Daud_1761 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Daud_1756 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Daud_1737 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Daud_1736 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Daud_1755 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Daud_1754 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Daud_1753 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Daud_1751 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Daud_1750 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Daud_1748 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Daud_1749 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Daud_1768 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Daud_1767 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Daud_1759 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Daud_1757 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Daud_1742 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Daud_1788 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Daud_1787 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Daud_1781 flagellin domain protein K02406 fliC; flagellin
D Daud_1783 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Daud_1784 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Daud_1794 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Daud_1795 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Daud_1790 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Daud_0492 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D Daud_1744 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Daud_0306 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:dau04981]
D Daud_2011 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D Daud_2147 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:dau01501]
D Daud_2100 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Daud_2099 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Daud_1369 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Daud_1463 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:dau01502]
D Daud_1902 peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Daud_1240 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Daud_0472 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Daud_1440 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Daud_1439 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Daud_1436 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dau01503]
D Daud_0332 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1509 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1869 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1880 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Daud_2100 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Daud_2099 acriflavin resistance protein K18138 acrB; multidrug efflux pump
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dau01000]
C 01001 Protein kinases [BR:dau01001]
D Daud_1588 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Daud_1662 capsular polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Daud_1418 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Daud_1898 multi-sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D Daud_0530 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Daud_0468 signal transduction histidine kinase, LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D Daud_1792 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:dau01009]
D Daud_0649 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_1589 protein phosphatase 2C domain protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Daud_0825 phosphoserine phosphatase-like hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:dau01002]
D Daud_0948 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Daud_0967 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Daud_0631 spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D Daud_0156 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Daud_1650 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Daud_1427 peptidase U4, sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D Daud_1635 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Daud_2021 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Daud_0480 NLP/P60 protein K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D Daud_1632 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Daud_0360 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Daud_0140 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Daud_0446 hypothetical protein K07813 agrB; accessory gene regulator B
D Daud_0196 Abortive infection protein K07052 K07052; CAAX protease family protein
D Daud_1902 peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Daud_1605 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Daud_0246 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Daud_1004 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Daud_0087 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Daud_0841 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Daud_0528 HtpX domain protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Daud_1456 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D Daud_0616 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Daud_1880 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Daud_1227 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1398 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1877 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1479 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Daud_0803 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Daud_1476 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Daud_1477 peptidase S16, lon domain protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D Daud_0710 putative prophage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Daud_0757 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Daud_1912 putative prophage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Daud_0662 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Daud_0287 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Daud_2179 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Daud_1165 Rhomboid family protein K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D Daud_1616 peptidase S55, SpoIVB K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D Daud_0854 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Daud_0603 20S proteasome, A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Daud_1374 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Daud_1002 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein
D Daud_1001 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:dau01003]
D Daud_1106 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Daud_1322 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Daud_1369 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Daud_1437 stage V sporulation protein E K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_1459 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_2098 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Daud_2092 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Daud_1655 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dau01005]
D Daud_2092 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dau01011]
D Daud_1433 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Daud_2202 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Daud_1434 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Daud_1435 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Daud_1438 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Daud_1441 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Daud_1240 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Daud_0472 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Daud_1508 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Daud_0854 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Daud_1439 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Daud_1436 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Daud_0835 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Daud_1654 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Daud_1684 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Daud_2088 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Daud_1369 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Daud_1463 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Daud_1442 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Daud_1227 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1398 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1877 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Daud_1437 stage V sporulation protein E K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_1459 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_1902 peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Daud_0480 NLP/P60 protein K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D Daud_1715 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Daud_0918 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Daud_1096 cell wall hydrolase, SleB K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Daud_1268 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Daud_2135 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Daud_0332 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1509 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1869 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:dau01004]
D Daud_0641 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Daud_0639 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Daud_0644 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Daud_0674 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Daud_0642 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Daud_2093 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Daud_0640 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Daud_1572 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Daud_0895 ATP-grasp domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Daud_0638 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Daud_1171 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Daud_1179 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Daud_1727 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:dau01008]
C 01006 Prenyltransferases [BR:dau01006]
D Daud_1025 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Daud_1350 Trans-hexaprenyltranstransferase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D Daud_0610 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Daud_0556 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Daud_1088 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Daud_2102 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:dau01007]
D Daud_1531 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Daud_1368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Daud_1201 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Daud_0188 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Daud_2181 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Daud_0041 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Daud_1408 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Daud_1473 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Daud_1865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Daud_0131 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Daud_0906 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Daud_0905 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Daud_0484 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Daud_0485 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Daud_0013 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Daud_0618 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Daud_1384 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Daud_0912 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Daud_1378 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Daud_1377 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Daud_1602 aminotransferase, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Daud_1603 aminotransferase, class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Daud_2182 aminotransferase, class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D Daud_1184 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1626 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Daud_1326 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Daud_0342 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Daud_0653 aminotransferase class-III K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Daud_1328 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Daud_1340 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Daud_0351 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Daud_2032 Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:dau00194]
D Daud_2136 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Daud_2137 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Daud_2138 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Daud_2139 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Daud_2140 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Daud_2141 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Daud_2142 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Daud_2143 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dau03000]
D Daud_1988 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Daud_0065 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Daud_2134 regulatory protein, DeoR K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D Daud_0486 putative signal-transduction protein with CBS domains K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D Daud_1248 hypothetical protein K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D Daud_0455 putative transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Daud_0783 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_1482 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_2039 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Daud_0613 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Daud_1549 iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Daud_0125 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Daud_1585 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D Daud_0605 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Daud_0777 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D Daud_1832 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Daud_0040 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D Daud_0073 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D Daud_2229 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Daud_0184 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Daud_1030 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Daud_2060 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Daud_0178 Firmicute transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response
D Daud_1051 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D Daud_1306 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Daud_1445 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:dau03021]
D Daud_0253 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Daud_0216 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Daud_0217 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Daud_1596 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Daud_0492 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D Daud_0346 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Daud_2125 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Daud_0982 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Daud_1224 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Daud_1425 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Daud_1426 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Daud_0192 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D Daud_2038 sigma-70 region 2 domain protein K03093 sigI; RNA polymerase sigma-I factor
D Daud_1744 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D Daud_0923 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Daud_1020 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Daud_0210 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Daud_1705 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Daud_0693 anti-sigma-factor antagonist K17762 rsbS; rsbT antagonist protein RsbS
D Daud_0692 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D Daud_0124 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Daud_0130 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Daud_2173 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dau03019]
D Daud_1492 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Daud_1453 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Daud_0645 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Daud_0808 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Daud_0947 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Daud_1061 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Daud_0329 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Daud_1397 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Daud_0306 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Daud_0934 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Daud_2173 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Daud_1055 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Daud_2057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Daud_2007 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Daud_0557 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Daud_0300 Uncharacterised P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:dau03011]
D Daud_1178 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D Daud_0606 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Daud_0231 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Daud_0252 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4
D Daud_0242 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Daud_2216 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Daud_0221 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Daud_0239 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Daud_0331 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Daud_0224 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Daud_0251 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Daud_0220 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Daud_0250 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Daud_0238 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Daud_0933 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Daud_0656 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Daud_0234 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Daud_2214 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Daud_0229 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Daud_2067 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Daud_2051 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Daud_0212 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Daud_0228 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Daud_0225 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Daud_0226 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Daud_0237 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Daud_0240 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Daud_2212 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Daud_0213 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Daud_0211 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Daud_0214 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Daud_0330 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Daud_0235 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Daud_0244 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Daud_0232 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Daud_0254 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Daud_0241 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Daud_0661 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Daud_1381 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Daud_1452 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Daud_0230 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Daud_0227 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Daud_0236 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Daud_1451 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Daud_0627 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Daud_0233 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Daud_0243 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Daud_2156 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Daud_0637 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Daud_0208 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Daud_2238 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Daud_1382 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Daud_0249 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Daud_0070 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Daud_0219 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D Daud_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Daud_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Daud_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Daud_R0031 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Daud_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Daud_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dau03009]
D Daud_0645 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Daud_1492 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Daud_2045 GTP-binding protein Era K03595 era; GTPase
D Daud_1873 small GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D Daud_0923 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Daud_1020 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Daud_0210 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Daud_1705 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Daud_0045 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Daud_1591 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Daud_2054 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Daud_2231 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Daud_1444 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Daud_0039 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Daud_0555 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Daud_1028 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Daud_0190 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Daud_1590 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Daud_0535 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Daud_1196 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Daud_0949 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Daud_2014 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Daud_0659 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Daud_0839 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Daud_0465 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Daud_2055 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Daud_1453 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Daud_0915 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Daud_1397 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Daud_1587 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Daud_1172 small GTP-binding protein K03977 engA; GTPase
D Daud_0663 GTP-binding protein, HSR1-related K14540 rbgA; ribosome biogenesis GTPase A
D Daud_1110 GTP-binding protein, HSR1-related K03665 hflX; GTPase
D Daud_2151 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Daud_0901 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Daud_0927 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Daud_0922 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Daud_1866 iojap-like protein K09710 ybeB; ribosome-associated protein
D Daud_2081 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Daud_2218 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Daud_0636 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:dau03016]
D Daud_0478 metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Daud_1203 CBS domain containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Daud_0477 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Daud_0618 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Daud_1408 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Daud_1865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Daud_0041 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Daud_2181 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Daud_0131 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Daud_0906 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Daud_0912 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Daud_1384 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Daud_0013 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Daud_0188 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Daud_1473 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Daud_0905 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Daud_1378 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Daud_1377 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Daud_1368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Daud_1201 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Daud_0902 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Daud_2052 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Daud_0549 RNA modification enzyme, MiaB family K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Daud_2053 MiaB-like tRNA modifying enzyme K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
D Daud_1481 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Daud_0255 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Daud_0929 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Daud_0907 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Daud_2151 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Daud_0556 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Daud_2233 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Daud_2232 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Daud_1535 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Daud_1987 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Daud_2237 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Daud_R0018 Bacterial RNase P class A as predicted by Rfam (RF00010), score 337.58 K01978 rnpB; RNase P catalytic RNA component
D Daud_1505 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Daud_0488 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Daud_0484 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Daud_0485 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Daud_1531 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Daud_0014 CMP/dCMP deaminase, zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Daud_0127 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Daud_0601 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Daud_0660 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Daud_0496 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Daud_1049 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Daud_1379 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Daud_2035 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Daud_1159 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Daud_0882 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Daud_0063 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Daud_0681 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Daud_1236 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Daud_1237 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Daud_1234 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Daud_0137 4Fe-4S ferredoxin, iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Daud_1916 4Fe-4S ferredoxin, iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Daud_1361 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Daud_1359 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Daud_0086 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Daud_2015 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Daud_2012 putative metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Daud_2016 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Daud_0329 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Daud_0934 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:dau03012]
D Daud_0926 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Daud_1383 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Daud_0607 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Daud_0207 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Daud_0223 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Daud_0222 translation elongation factor G K02355 fusA; elongation factor G
D Daud_1229 translation elongation factor G K02355 fusA; elongation factor G
D Daud_1094 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D Daud_2154 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Daud_0609 ribosome recycling factor K02838 frr; ribosome recycling factor
D Daud_2152 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Daud_0071 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Daud_0248 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Daud_1005 translation elongation factor P K02356 efp; elongation factor P
D Daud_2079 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:dau03110]
D Daud_0452 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Daud_0181 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Daud_1478 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Daud_0604 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Daud_2057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Daud_2007 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Daud_2059 chaperonin Cpn60/TCP-1 K22447 cct; archaeal chaperonin
D Daud_2056 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Daud_0453 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Daud_2058 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Daud_0454 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Daud_1122 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Daud_1333 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Daud_1494 conserved hypothetical protein K13993 HSP20; HSP20 family protein
D Daud_2008 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Daud_1880 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Daud_0087 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Daud_0841 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Daud_2143 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Daud_1896 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D Daud_1649 hydrogenase expression/synthesis, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Daud_1648 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Daud_1396 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Daud_0921 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:dau04131]
D Daud_0088 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Daud_1492 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Daud_0312 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Daud_0302 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_0881 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_1270 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_1056 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:dau03032]
D Daud_1837 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Daud_0075 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Daud_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Daud_2211 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Daud_0893 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Daud_0491 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Daud_2215 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Daud_1050 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Daud_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Daud_2068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Daud_0037 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Daud_0562 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1567 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_2003 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_0031 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Daud_0664 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Daud_1403 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Daud_1617 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Daud_0008 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Daud_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Daud_0600 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dau03036]
D Daud_0645 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Daud_0075 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Daud_0453 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Daud_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Daud_0557 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Daud_0082 Septum formation initiator K05589 ftsB; cell division protein FtsB
D Daud_0284 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Daud_0837 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Daud_1443 Septum formation initiator K03586 ftsL; cell division protein FtsL
D Daud_1432 Polypeptide-transport-associated domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Daud_1437 stage V sporulation protein E K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_0285 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Daud_1428 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Daud_1376 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Daud_0332 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1509 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_1869 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Daud_2100 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Daud_1324 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Daud_1462 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Daud_1461 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Daud_1460 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Daud_1410 DivIVA family protein K04074 divIVA; cell division initiation protein
D Daud_1413 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF
D Daud_1466 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Daud_2133 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Daud_1465 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Daud_1464 conserved hypothetical protein K03571 mreD; rod shape-determining protein MreD
D Daud_1459 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_2230 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Daud_2229 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Daud_2232 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Daud_2231 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Daud_0601 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Daud_0602 phage integrase family protein K03733 xerC; integrase/recombinase XerC
D Daud_0795 phage integrase family protein K03733 xerC; integrase/recombinase XerC
D Daud_0498 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D Daud_0519 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D Daud_1282 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Daud_0074 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D Daud_0301 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:dau03400]
D Daud_1532 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Daud_0937 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Daud_0290 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Daud_1530 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Daud_1404 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Daud_1981 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Daud_2187 Deoxyribonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7]
D Daud_0900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Daud_1617 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Daud_1403 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Daud_0294 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Daud_0293 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Daud_0295 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Daud_1619 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Daud_0216 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Daud_0217 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Daud_0253 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Daud_1596 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Daud_0072 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Daud_0553 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Daud_1373 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Daud_0554 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Daud_1021 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Daud_1024 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Daud_1050 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Daud_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Daud_2068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Daud_0037 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Daud_0562 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_1567 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_2003 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Daud_0031 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Daud_2215 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Daud_0818 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Daud_1393 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Daud_0843 recA protein K03553 recA; recombination protein RecA
D Daud_1363 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Daud_1362 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Daud_1364 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Daud_1594 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Daud_0182 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Daud_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Daud_0483 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Daud_0033 recombination protein RecR K06187 recR; recombination protein RecR
D Daud_1031 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Daud_1276 UvrD-like DNA helicase, C terminal K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Daud_1277 UvrD-like DNA helicase, C terminal K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Daud_1289 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Daud_1811 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Daud_0594 Ku domain protein K10979 ku; DNA end-binding protein Ku
D Daud_0596 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Daud_0598 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Daud_0008 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Daud_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Daud_0600 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Daud_0075 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Daud_0758 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Daud_0710 putative prophage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Daud_0757 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Daud_1912 putative prophage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Daud_1154 PHP C-terminal domain protein K02347 polX; DNA polymerase (family X)
D Daud_1269 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Daud_0928 phosphoesterase, RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:dau03029]
D Daud_0926 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Daud_1383 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Daud_0607 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Daud_0207 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Daud_0223 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Daud_0222 translation elongation factor G K02355 fusA; elongation factor G
D Daud_1229 translation elongation factor G K02355 fusA; elongation factor G
D Daud_2045 GTP-binding protein Era K03595 era; GTPase
D Daud_1368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Daud_1865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Daud_0906 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Daud_2181 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Daud_1033 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Daud_0379 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Daud_1034 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Daud_1032 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Daud_2215 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Daud_2057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Daud_2058 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Daud_2007 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Daud_2008 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Daud_2056 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Daud_0907 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Daud_2102 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Daud_2235 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dau02000]
D Daud_0410 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Daud_0411 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Daud_0412 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Daud_0310 ABC-transporter-like protein, periplasmic substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Daud_1542 extracellular solute-binding protein, family 1 K05772 tupA; tungstate transport system substrate-binding protein
D Daud_1541 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein
D Daud_1540 ABC transporter related K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Daud_1474 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Daud_1909 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Daud_0534 conserved hypothetical protein 245 K02069 STAR2; UDP-glucose/iron transport system permease protein
D Daud_0533 ABC transporter related K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Daud_1956 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Daud_1959 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Daud_1958 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Daud_1416 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Daud_1135 extracellular solute-binding protein, family 3 K10036 glnH; glutamine transport system substrate-binding protein
D Daud_1136 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein
D Daud_1137 ABC transporter related K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Daud_0668 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_1131 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_1392 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Daud_0669 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_1130 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_1391 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Daud_0670 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_1129 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_1390 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Daud_0671 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_1128 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_1389 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Daud_0672 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_1127 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_1388 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Daud_0391 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Daud_1982 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Daud_0386 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Daud_0387 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Daud_0388 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Daud_0389 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Daud_1216 copper amine oxidase domain protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Daud_1218 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Daud_1217 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Daud_1214 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Daud_1317 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Daud_1316 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Daud_1315 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Daud_0833 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Daud_1547 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Daud_1546 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Daud_1149 ABC-3 protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D Daud_1150 ABC transporter related K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D Daud_1860 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D Daud_0274 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Daud_1859 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Daud_0273 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Daud_1861 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Daud_0275 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Daud_1858 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Daud_1640 hypothetical protein K16915 cbiL; nickel transport protein
D Daud_2086 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Daud_1151 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Daud_0285 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Daud_0284 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Daud_1125 daunorubicin resistance ABC transporter, inner membrane subunit B K01992 ABC-2.P; ABC-2 type transport system permease protein
D Daud_1206 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Daud_1211 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Daud_1126 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Daud_1207 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Daud_1213 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Daud_1146 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Daud_1145 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Daud_1371 ABC transporter related K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Daud_1308 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D Daud_0142 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Daud_0435 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Daud_0481 magnesium transporter K06213 mgtE; magnesium transporter
D Daud_1794 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Daud_1795 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Daud_2004 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Daud_0057 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Daud_2099 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Daud_0056 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Daud_0373 L-lactate permease K03303 lutP; lactate permease
D Daud_0128 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Daud_1471 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter
D Daud_0272 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Daud_1570 Na+/solute symporter K14393 actP; cation/acetate symporter
D Daud_0860 TrkA-C domain protein K07228 khtT; K+:H+ antiporter subunit KhtT
D Daud_0861 sodium/hydrogen exchanger K26732 khtU; K+:H+ antiporter subunit KhtU
D Daud_0265 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Daud_0545 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Daud_0266 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Daud_1380 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Daud_0612 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Daud_1264 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D Daud_1876 Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D Daud_0312 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Daud_2163 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Daud_2162 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Daud_2158 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Daud_2160 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Daud_2161 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Daud_2168 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Daud_2167 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Daud_2166 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Daud_1230 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D Daud_1654 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Daud_1684 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Daud_2088 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Daud_0350 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Daud_0349 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Daud_1437 stage V sporulation protein E K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Daud_2150 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Daud_0308 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Daud_1015 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Daud_2100 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Daud_1662 capsular polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Daud_1267 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Daud_1952 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Daud_1953 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Daud_1266 GTP-binding protein, HSR1-related K04759 feoB; ferrous iron transport protein B
D Daud_1550 small GTP-binding protein K04759 feoB; ferrous iron transport protein B
D Daud_1951 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:dau02044]
D Daud_0993 hypothetical protein K02456 gspG; general secretion pathway protein G
D Daud_0967 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Daud_0957 Tfp pilus assembly protein PilE K02650 pilA; type IV pilus assembly protein PilA
D Daud_0956 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Daud_0968 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Daud_0991 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Daud_0952 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Daud_0970 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Daud_0992 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Daud_0953 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Daud_0975 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Daud_0998 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Daud_0954 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Daud_0976 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Daud_0999 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Daud_0955 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Daud_0977 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Daud_1000 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Daud_0965 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D Daud_0951 twitching motility protein K02669 pilT; twitching motility protein PilT
D Daud_0969 twitching motility protein K02669 pilT; twitching motility protein PilT
D Daud_1411 protein of unknown function YGGT K02221 yggT; YggT family protein
D Daud_2071 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Daud_1943 CMP/dCMP deaminase, zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Daud_2070 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Daud_1113 putative ComF operon protein K02241 comFB; competence protein ComFB
D Daud_1748 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Daud_1749 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Daud_1836 flagellar protein FhlB-like cytoplasmic domain protein K04061 flhB2; flagellar biosynthesis protein
D Daud_1765 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Daud_1763 Flagellar biosynthesis/type III secretory pathway protein-like protein K02411 fliH; flagellar assembly protein FliH
D Daud_1762 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Daud_1736 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Daud_1755 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Daud_1754 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Daud_1753 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Daud_1751 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Daud_1750 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Daud_2080 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Daud_1356 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Daud_0209 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Daud_1355 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Daud_0307 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Daud_0245 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Daud_0655 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Daud_0646 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Daud_1358 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Daud_2235 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Daud_1117 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1118 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1119 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Daud_1120 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dau02042]
D Daud_2004 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:dau02022]
D Daud_1418 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Daud_1419 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Daud_1898 multi-sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D Daud_1897 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D Daud_0530 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Daud_2177 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Daud_1615 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Daud_1257 response regulator receiver K11692 K11692; two-component system, CitB family, response regulator DctR
D Daud_0468 signal transduction histidine kinase, LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D Daud_0119 response regulator receiver protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D Daud_0469 response regulator receiver protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D Daud_0746 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
D Daud_1792 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Daud_1738 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Daud_1791 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Daud_2028 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
D Daud_2031 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:dau02035]
D Daud_1792 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Daud_1560 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Daud_1793 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Daud_1739 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Daud_1741 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Daud_1740 Protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Daud_1791 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Daud_1738 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Daud_0680 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Daud_1561 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Daud_1763 Flagellar biosynthesis/type III secretory pathway protein-like protein K02411 fliH; flagellar assembly protein FliH
D Daud_1762 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Daud_1761 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Daud_1754 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Daud_1753 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Daud_1751 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Daud_1750 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Daud_1748 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Daud_1749 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Daud_1764 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Daud_1737 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Daud_1736 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Daud_1755 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Daud_1765 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Daud_1756 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Daud_1766 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Daud_1768 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Daud_1767 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Daud_1759 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Daud_1742 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Daud_1757 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Daud_1788 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Daud_1787 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Daud_1781 flagellin domain protein K02406 fliC; flagellin
D Daud_1783 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Daud_1784 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Daud_1744 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D Daud_1794 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Daud_1795 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Daud_1790 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Daud_1782 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D Daud_1747 GTP-binding signal recognition particle SRP54, G-domain K02404 flhF; flagellar biosynthesis protein FlhF
D Daud_1746 Cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Daud_0951 twitching motility protein K02669 pilT; twitching motility protein PilT
D Daud_0969 twitching motility protein K02669 pilT; twitching motility protein PilT
D Daud_0957 Tfp pilus assembly protein PilE K02650 pilA; type IV pilus assembly protein PilA
D Daud_0956 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Daud_0968 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Daud_0991 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Daud_0952 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Daud_0970 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Daud_0992 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Daud_0967 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Daud_0965 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D Daud_0955 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Daud_0977 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Daud_1000 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Daud_0954 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Daud_0976 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Daud_0999 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Daud_0953 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Daud_0975 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Daud_0998 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:dau04812]
D Daud_0337 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K06990 MEMO1; MEMO1 family protein
D Daud_1466 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Daud_2133 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Daud_1428 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Daud_1324 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Daud_1462 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Daud_1461 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Daud_1460 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Daud_2230 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Daud_2229 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dau04147]
D Daud_0306 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Daud_0302 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_0881 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_1270 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Daud_0303 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Daud_1056 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Daud_2007 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Daud_2057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Daud_1070 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Daud_0207 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Daud_0223 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Daud_1492 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Daud_2052 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Daud_1522 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Daud_0649 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Daud_1111 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Daud_0345 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Daud_0344 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Daud_2023 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2027 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_2030 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Daud_1344 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Daud_0012 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Daud_1629 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Daud_0304 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:dau02048]
D Daud_1289 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Daud_1811 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Daud_1288 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Daud_1810 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Daud_1290 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Daud_1813 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Daud_1286 CRISPR-associated protein, Csa1 family K19085 csa1; CRISPR-associated protein Csa1
D Daud_1293 hypothetical protein K19088 cst1; CRISPR-associated protein Cst1
D Daud_1292 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2
D Daud_1815 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2
D Daud_1287 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Daud_1812 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Daud_1291 CRISPR-associated protein Cas5 family K19090 cas5t; CRISPR-associated protein Cas5t
D Daud_1814 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t
D Daud_1817 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Daud_1803 CRISPR-associated RAMP protein, Csx10 family K19134 csx10; CRISPR-associated protein Csx10
D Daud_1821 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Daud_1823 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Daud_1822 conserved hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D Daud_1820 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Daud_1819 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Daud_1818 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D Daud_0199 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Daud_0200 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Daud_0401 McrBC 5-methylcytosine restriction system component-like protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D Daud_0402 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Daud_0572 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Daud_1831 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Daud_2124 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Daud_1832 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Daud_0206 conserved hypothetical protein K28275 vapC35S; ribonuclease VapC35/45/46/47 [EC:3.1.-.-]
D Daud_1709 PilT protein domain protein K28275 vapC35S; ribonuclease VapC35/45/46/47 [EC:3.1.-.-]
D Daud_0062 prevent-host-death family protein K28276 vapB35S; antitoxin VapB35/45/46/47
D Daud_0205 prevent-host-death family protein K28276 vapB35S; antitoxin VapB35/45/46/47
D Daud_1428 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Daud_1466 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Daud_2133 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Daud_0363 protein of unknown function DUF86 K28186 hepT; HepT family RNase toxin
D Daud_1679 protein of unknown function DUF86 K28186 hepT; HepT family RNase toxin
D Daud_1769 protein of unknown function DUF86 K28186 hepT; HepT family RNase toxin
D Daud_0364 DNA polymerase, beta domain protein region K28187 mntA; MntA family adenylyltransferase antitoxin
D Daud_1678 DNA polymerase, beta domain protein region K28187 mntA; MntA family adenylyltransferase antitoxin
D Daud_0907 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:dau04090]
C 01504 Antimicrobial resistance genes [BR:dau01504]
D Daud_1902 peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Daud_2100 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Daud_2099 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Daud_1248 hypothetical protein K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dau03100]
D Daud_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Daud_R0048 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Daud_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Daud_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Daud_R0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Daud_R0051 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Daud_R0050 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Daud_R0037 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Daud_R0044 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Daud_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Daud_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Daud_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Daud_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Daud_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Daud_R0038 tRNA-His K14226 tRNA-His; tRNA His
D Daud_R0033 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Daud_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Daud_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Daud_R0036 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Daud_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D Daud_R0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D Daud_R0052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Daud_R0022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Daud_R0026 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Daud_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Daud_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Daud_R0011 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Daud_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Daud_R0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Daud_R0028 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Daud_R0021 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Daud_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val
D Daud_R0035 tRNA-Val K14237 tRNA-Val; tRNA Val
D Daud_R0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D Daud_R0023 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Daud_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Daud_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Daud_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Daud_R0031 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Daud_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Daud_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Daud_R0018 Bacterial RNase P class A as predicted by Rfam (RF00010), score 337.58 K01978 rnpB; RNase P catalytic RNA component
D Daud_R0015 tmRNA as predicted by Rfam (RF00023), score 122.74 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Daud_0129 Shikimate/quinate 5-dehydrogenase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D Daud_0109 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Daud_1338 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Daud_1923 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Daud_0152 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Daud_1548 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Daud_1042 nickel-dependent hydrogenase, large subunit K00437 hydB; [NiFe] hydrogenase large subunit [EC:1.12.2.1]
D Daud_0550 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Daud_1986 Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D Daud_0338 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Daud_1722 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Daud_1994 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Daud_1072 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Daud_0108 Protein of unknown function DUF166 K22882 K22882; thymidylate synthase [EC:2.1.1.-]
D Daud_0170 GCN5-related N-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D Daud_0541 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Daud_1890 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Daud_1108 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Daud_0487 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Daud_0183 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D Daud_1932 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Daud_1225 putative anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D Daud_0180 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D Daud_0314 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Daud_1160 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Daud_0085 Phosphoprotein phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D Daud_1719 PHP C-terminal domain protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Daud_1064 PHP C-terminal domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Daud_0986 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Daud_1372 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Daud_2047 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Daud_0042 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Daud_0794 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Daud_0844 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Daud_0433 conserved hypothetical protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-]
D Daud_1593 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Daud_2062 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Daud_2149 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D Daud_0667 Radical SAM domain protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D Daud_0471 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Daud_1265 conserved hypothetical protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D Daud_2226 ExsB family protein K06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]
D Daud_2227 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Daud_1068 lysine 2,3-aminomutase YodO family protein K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D Daud_0885 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Daud_1143 RNA-3'-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D Daud_1544 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Daud_1863 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D Daud_1843 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D Daud_2208 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D Daud_2010 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Daud_1080 4Fe-4S ferredoxin, iron-sulfur binding domain protein K05337 fer; ferredoxin
D Daud_1495 gas vesicle protein GvpN K04748 norQ; nitric oxide reductase NorQ protein
D Daud_0149 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB
D Daud_1884 4Fe-4S ferredoxin, iron-sulfur binding domain protein K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D Daud_0790 methyl-viologen-reducing hydrogenase, delta subunit K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D Daud_1883 methyl-viologen-reducing hydrogenase, delta subunit K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D Daud_1098 NADH dehydrogenase (quinone) K14086 echA; ech hydrogenase subunit A
D Daud_1099 respiratory-chain NADH dehydrogenase, subunit 1 K14087 echB; ech hydrogenase subunit B
D Daud_1100 NADH ubiquinone oxidoreductase, 20 kDa subunit K14088 echC; ech hydrogenase subunit C
D Daud_1101 hydrogenase subunit, putative K14089 echD; ech hydrogenase subunit D
D Daud_1102 NADH-ubiquinone oxidoreductase, chain 49kDa K14090 echE; ech hydrogenase subunit E
D Daud_1103 4Fe-4S ferredoxin, iron-sulfur binding domain protein K14091 echF; ech hydrogenase subunit F
D Daud_2190 DsrC family protein K23077 dsrC; dissimilatory sulfite reductase related protein
D Daud_1223 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D Daud_1107 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Daud_1414 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Daud_0561 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D Daud_0894 cell wall hydrolase, SleB K01449 cwlJ; cell wall hydrolase
D Daud_2186 cell wall hydrolase, SleB K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D Daud_0856 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
D Daud_1733 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Daud_0144 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D Daud_0145 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
D Daud_1598 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A
D Daud_0004 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D Daud_1421 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Daud_0179 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator
D Daud_1480 trigger factor K03545 tig; trigger factor
D Daud_1577 putative formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D Daud_0256 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Daud_1644 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Daud_1643 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Daud_1642 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Daud_1645 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Daud_0820 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Daud_0619 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Daud_0506 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase
D Daud_1710 Resolvase, N-terminal domain K07450 K07450; putative resolvase
D Daud_1911 DNA binding domain, excisionase family K07450 K07450; putative resolvase
D Daud_1467 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Daud_1920 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Daud_1244 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D Daud_0505 ATP-dependent endonuclease, OLD family protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D Daud_0666 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Daud_0599 DNA protecting protein DprA K04096 smf; DNA processing protein
D Daud_0892 primosome, DnaD subunit K02086 dnaD; DNA replication protein
D Daud_2041 AAA ATPase, central domain protein K07478 ycaJ; putative ATPase
D Daud_0420 hypothetical protein K07481 K07481; transposase, IS5 family
D Daud_0695 putative methyl-accepting chemotaxis sensory transducer K07481 K07481; transposase, IS5 family
D Daud_1807 putative methyl-accepting chemotaxis sensory transducer K07481 K07481; transposase, IS5 family
D Daud_1808 putative methyl-accepting chemotaxis sensory transducer K07481 K07481; transposase, IS5 family
D Daud_1809 putative methyl-accepting chemotaxis sensory transducer K07481 K07481; transposase, IS5 family
D Daud_0744 transposase IS3/IS911 K07483 K07483; transposase
D Daud_0201 transposase IS66 K07484 K07484; transposase
D Daud_0202 IS66 Orf2 family protein K07484 K07484; transposase
D Daud_0703 IS66 Orf2 family protein K07484 K07484; transposase
D Daud_0704 transposase IS66 K07484 K07484; transposase
D Daud_0888 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Daud_1583 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Daud_1731 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Daud_2153 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Daud_0713 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Daud_0714 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Daud_0762 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Daud_0784 transposase, IS605 OrfB K07496 K07496; putative transposase
D Daud_0845 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Daud_0889 transposase, IS605 OrfB K07496 K07496; putative transposase
D Daud_1582 transposase, IS605 OrfB K07496 K07496; putative transposase
D Daud_1730 transposase, IS605 OrfB K07496 K07496; putative transposase
D Daud_0743 integrase, catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Daud_0709 protein of unknown function DUF450 K07504 K07504; predicted type IV restriction endonuclease
D Daud_0032 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Daud_1162 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
C 99978 Cell growth
D Daud_0107 Cobyrinic acid a,c-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D Daud_0874 Cobyrinic acid a,c-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D Daud_0034 SigmaK-factor processing regulatory BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D Daud_2234 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D Daud_1198 nucleoside recognition domain protein K06373 spmA; spore maturation protein A
D Daud_1197 nucleoside recognition domain protein K06374 spmB; spore maturation protein B
D Daud_1226 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D Daud_0828 protein of unknown function DUF95, transmembrane K06384 spoIIM; stage II sporulation protein M
D Daud_1284 required for dissolution of the septal cell wall; RBL05740 K06384 spoIIM; stage II sporulation protein M
D Daud_1176 Stage II sporulation P family protein K06385 spoIIP; stage II sporulation protein P
D Daud_2065 Stage II sporulation P family protein K06385 spoIIP; stage II sporulation protein P
D Daud_1424 conserved hypothetical protein K06387 spoIIR; stage II sporulation protein R
D Daud_1007 AAA ATPase K06390 spoIIIAA; stage III sporulation protein AA
D Daud_1008 transcriptional regulator, Fis family K06391 spoIIIAB; stage III sporulation protein AB
D Daud_1009 Stage III sporulation AC family protein K06392 spoIIIAC; stage III sporulation protein AC
D Daud_1010 putative sporulation protein K06393 spoIIIAD; stage III sporulation protein AD
D Daud_1011 conserved hypothetical protein K06394 spoIIIAE; stage III sporulation protein AE
D Daud_1012 hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF
D Daud_1013 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D Daud_1014 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH
D Daud_0897 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D Daud_0819 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D Daud_1222 SpoVA protein K06405 spoVAC; stage V sporulation protein AC
D Daud_1221 Stage V sporulation AD family protein K06406 spoVAD; stage V sporulation protein AD
D Daud_1220 SpoVA protein K06407 spoVAE; stage V sporulation protein AE
D Daud_0943 alanine dehydrogenase/PNT domain protein K06410 spoVFA; dipicolinate synthase subunit A
D Daud_0944 flavoprotein K06411 spoVFB; dipicolinate synthase subunit B
D Daud_0067 SpoVG family protein K06412 spoVG; stage V sporulation protein G
D Daud_0593 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D Daud_1063 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Daud_1771 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D Daud_0630 small acid-soluble spore protein, alpha/beta type K06418 sspA_B_C_D; small acid-soluble spore protein A/B/C/D
D Daud_0846 small, acid-soluble spore protein, alpha/be K06423 sspF; small acid-soluble spore protein F
D Daud_0048 peptidase U57, YabG K06436 yabG; spore coat assemly protein
D Daud_2049 putative stage IV sporulation YqfD K06438 yqfD; similar to stage IV sporulation protein
D Daud_1935 spore germination B3 GerAC family protein K06297 gerKC; spore germination protein KC
D Daud_2185 putative spore germination protein K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D Daud_1354 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D Daud_2048 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Daud_0591 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D Daud_1568 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D Daud_2002 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D Daud_0689 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D Daud_1147 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Daud_1489 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
D Daud_1498 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
D Daud_1499 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
C 99994 Others
D Daud_1415 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Daud_2188 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Daud_1894 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Daud_0167 DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Daud_0816 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Daud_1726 Patatin K07001 K07001; NTE family protein
D Daud_1773 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D Daud_1370 SufBD protein K09014 sufB; Fe-S cluster assembly protein SufB
D Daud_0323 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D Daud_2224 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Daud_2066 conserved hypothetical protein K08972 K08972; putative membrane protein
D Daud_1718 protein of unknown function DUF368 K08974 K08974; putative membrane protein
C 99997 Function unknown
D Daud_2206 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Daud_0896 DRTGG domain protein K06873 K06873; uncharacterized protein
D Daud_1048 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Daud_0090 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Daud_0460 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Daud_1914 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Daud_0657 conserved hypothetical protein K06960 K06960; uncharacterized protein
D Daud_0191 protein of unknown function DUF901 K06962 K06962; uncharacterized protein
D Daud_0537 TatD-related deoxyribonuclease K07051 K07051; uncharacterized protein
D Daud_1157 protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D Daud_2114 PilT protein domain protein K07063 K07063; uncharacterized protein
D Daud_0415 PilT protein domain protein K07065 K07065; uncharacterized protein
D Daud_2122 PilT protein domain protein K07065 K07065; uncharacterized protein
D Daud_2128 PilT protein domain protein K07065 K07065; uncharacterized protein
D Daud_0459 NAD-dependent epimerase/dehydratase K07071 K07071; uncharacterized protein
D Daud_0914 aldo/keto reductase K07079 K07079; uncharacterized protein
D Daud_1256 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Daud_1969 protein of unknown function DUF897 K07086 K07086; uncharacterized protein
D Daud_1899 permease K07089 K07089; uncharacterized protein
D Daud_0309 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Daud_0440 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Daud_1975 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Daud_0456 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Daud_0524 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Daud_0064 conserved hypothetical protein K07112 K07112; uncharacterized protein
D Daud_2210 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D Daud_1156 conserved hypothetical radical SAM protein K07139 K07139; uncharacterized protein
D Daud_0848 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Daud_2236 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Daud_0836 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Daud_0536 conserved hypothetical protein K09004 K09004; uncharacterized protein
D Daud_1115 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein
D Daud_0418 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D Daud_2132 conserved hypothetical protein K09126 K09126; uncharacterized protein
D Daud_1235 protein of unknown function DUF366 K09139 K09139; uncharacterized protein
D Daud_1353 protein of unknown function DUF711 K09157 K09157; uncharacterized protein
D Daud_1357 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein
D Daud_2085 protein of unknown function DUF1284 K09706 K09706; uncharacterized protein
D Daud_0909 protein of unknown function DUF375 K09740 K09740; uncharacterized protein
D Daud_0429 protein of unknown function DUF342 K09749 K09749; uncharacterized protein
D Daud_0887 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Daud_0283 conserved hypothetical protein K09766 K09766; uncharacterized protein
D Daud_1275 conserved hypothetical protein K09768 K09768; uncharacterized protein
D Daud_0046 protein of unknown function DUF458 K09776 K09776; uncharacterized protein
D Daud_0592 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Daud_0654 putative helix-turn-helix protein, YlxM/p13 family protein K09787 K09787; uncharacterized protein
D Daud_0886 protein of unknown function DUF456 K09793 K09793; uncharacterized protein
D Daud_1997 protein of unknown function DUF541 K09797 K09797; uncharacterized protein
D Daud_1518 hypothetical protein K09803 K09803; uncharacterized protein
D Daud_1046 conserved hypothetical protein K09942 K09942; uncharacterized protein
D Daud_1970 conserved hypothetical protein K09981 K09981; uncharacterized protein
D Daud_0924 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: October 10, 2025