+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Dyadobacter chenwenxiniae</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        MUK70_20295 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        MUK70_25215 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        MUK70_25220 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        MUK70_07255 sigma-70 family RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor 
E        MUK70_03760 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_10475 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_28930 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_04700 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_17410 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_07600 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_19770 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_24965 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_28285 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        MUK70_21960 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_19920 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_28805 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_08430 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_06005 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_13875 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_14435 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_10815 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_27390 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_03810 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_10520 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_18260 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_16020 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_13390 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_14610 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_01410 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_04635 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        MUK70_29230 rpoN; RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        MUK70_00665 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA 
E        MUK70_17130 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB 
E        MUK70_25190 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG 
E        MUK70_09335 SpoIIE family protein phosphatase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        MUK70_13475 PAS domain-containing sensor histidine kinase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        MUK70_13480 alpha/beta hydrolase	K19707 rsbQ; sigma-B regulation protein RsbQ 
E        MUK70_09385 STAS domain-containing protein	K04749 rsbV; anti-sigma B factor antagonist 
D      Transcription elongation factors
E        MUK70_24900 TraR/DksA C4-type zinc finger protein	K06204 dksA; RNA polymerase-binding transcription factor 
E        MUK70_17710 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
D      Transcription termination factor
E        MUK70_15670 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: April 9, 2024