+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Dendrobium catenatum

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 110115816 mRNA cap guanine-N7 methyltransferase 2 isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 110096007 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 110097129 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 110110603 mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E 110108334 cyclin-dependent kinase D-1 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D Cap binding complex E 110100435 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 110106610 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2 E 110104676 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 110096074 pre-mRNA cleavage factor Im 25 kDa subunit 2 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 110098885 pre-mRNA cleavage factor Im 25 kDa subunit 2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 110107956 cleavage and polyadenylation specificity factor subunit 6 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 E 110106240 uncharacterized protein LOC110106240 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 110091859 protein CLP1 homolog isoform X1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 110097277 protein CLP1 homolog isoform X1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 110093928 polyadenylation and cleavage factor homolog 4 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 E 110112608 polyadenylation and cleavage factor homolog 4 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E 110092320 cleavage and polyadenylation specificity factor subunit 1 isoform X2 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 110099984 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 110110593 cleavage and polyadenylation specificity factor subunit 3-I isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 110104170 uncharacterized protein LOC110104170 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 110102526 zinc finger CCCH domain-containing protein 45 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 110099716 30-kDa cleavage and polyadenylation specificity factor 30 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 110094305 flowering time control protein FY isoform X1 K15542 PFS2; polyadenylation factor subunit 2 E 110114250 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2 E 110096434 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2 E 110103560 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110093133 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110115062 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110111100 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110104409 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110106844 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110116736 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 110107465 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 110115868 cleavage stimulation factor subunit 50 isoform X1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 110107497 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2 E 110098635 cleavage stimulating factor 64 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 110092057 cleavage stimulation factor subunit 77 K14408 CSTF3; cleavage stimulation factor subunit 3 E 110105937 uncharacterized protein LOC110105937 K06100 SYMPK; symplekin E 110092056 uncharacterized protein LOC110092056 isoform X1 K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 110095769 small nuclear ribonucleoprotein-associated protein B' K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 110098550 small nuclear ribonucleoprotein SmD3b K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 110112762 small nuclear ribonucleoprotein SmD3b K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 110100407 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 110095220 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E 110111480 probable small nuclear ribonucleoprotein F isoform X1 K11098 SNRPF; small nuclear ribonucleoprotein F E 110106768 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E 110099984 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 110110593 cleavage and polyadenylation specificity factor subunit 3-I isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 110107497 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2 E 110098635 cleavage stimulating factor 64 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 110105937 uncharacterized protein LOC110105937 K06100 SYMPK; symplekin E 110092056 uncharacterized protein LOC110092056 isoform X1 K06100 SYMPK; symplekin D DRB sensitivity inducing factor (DSIF) complex E 110092250 transcription elongation factor SPT4 homolog 2-like K15171 SUPT4H1; transcription elongation factor SPT4 E 110093713 transcription elongation factor SPT4 homolog 2 K15171 SUPT4H1; transcription elongation factor SPT4 E 110092213 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5 E 114580806 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 110094702 probable N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 110101081 N6-adenosine-methyltransferase non-catalytic subunit MTB isoform X1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 110095485 RNA N6-adenosine-methyltransferase mettl16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 110104041 FKBP12-interacting protein of 37 kDa K22824 WTAP; pre-mRNA-splicing regulator WTAP E 110108479 zinc finger CCCH domain-containing protein 13 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 110116330 zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 110108164 E3 ubiquitin-protein ligase HAKAI homolog K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 110095984 nuclear poly(A) polymerase 4-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 110106137 nuclear poly(A) polymerase 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 110094680 nuclear poly(A) polymerase 1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 110098500 nuclear poly(A) polymerase 4 isoform X2 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing E 110091968 BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 E 110106692 BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 E 110110039 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 E 110114930 zinc finger CCCH domain-containing protein 27 isoform X1 K13192 RBM26; RNA-binding protein 26 E 110093438 RNA demethylase ALKBH9B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110093441 RNA demethylase ALKBH9B-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110093443 RNA demethylase ALKBH9B-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110093456 RNA demethylase ALKBH9B-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 114578329 RNA demethylase ALKBH9B-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110097451 RNA demethylase ALKBH9B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110093439 uncharacterized protein LOC110093439 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110103648 RNA demethylase ALKBH10B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] E 110093461 RNA demethylase ALKBH9B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] C Other processing factors D 110108463 KIN17-like protein K13102 KIN; DNA/RNA-binding protein KIN17 D 110103139 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 110099783 serrate RNA effector molecule K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 110092765 RNA-binding protein Y14A K12876 RBM8A; RNA-binding protein 8A E 110107773 protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi E 110097997 THO complex subunit 4C-like K12881 THOC4; THO complex subunit 4 E 110111740 THO complex subunit 4D isoform X1 K12881 THOC4; THO complex subunit 4 E 110098339 THO complex subunit 4A K12881 THOC4; THO complex subunit 4 E 110104444 THO complex subunit 4A K12881 THOC4; THO complex subunit 4 E 110100335 THO complex subunit 4D-like K12881 THOC4; THO complex subunit 4 E 110095491 DEAD-box ATP-dependent RNA helicase 56 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 110100224 DEAD-box ATP-dependent RNA helicase 56 isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 110096025 ATP-dependent RNA helicase DBP5-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 110104482 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 110101715 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 110096474 pinin isoform X1 K13114 PNN; pinin E 110110510 actin cytoskeleton-regulatory complex protein PAN1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus E 110097528 serine/arginine-rich splicing factor SR45 K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 110103489 serine/arginine repetitive matrix protein 1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 110110464 THO complex subunit 2 K12879 THOC2; THO complex subunit 2 E 110112335 THO complex subunit 3 isoform X1 K12880 THOC3; THO complex subunit 3 E 110097997 THO complex subunit 4C-like K12881 THOC4; THO complex subunit 4 E 110111740 THO complex subunit 4D isoform X1 K12881 THOC4; THO complex subunit 4 E 110098339 THO complex subunit 4A K12881 THOC4; THO complex subunit 4 E 110104444 THO complex subunit 4A K12881 THOC4; THO complex subunit 4 E 110100335 THO complex subunit 4D-like K12881 THOC4; THO complex subunit 4 E 110115329 THO complex subunit 5A isoform X1 K13174 THOC5; THO complex subunit 5 E 110100342 THO complex subunit 6 isoform X1 K13175 THOC6; THO complex subunit 6 E 110096154 THO complex subunit 7B K13176 THOC7; THO complex subunit 7 D TREX-2 complex E 110103770 enhanced ethylene response protein 5 K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 110106977 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1 E 110093925 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1 E 110106516 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor E 110102265 SAC3 family protein C isoform X1 K23719 SAC3; nuclear mRNA export protein SAC3 E 110103640 SAC3 family protein B isoform X1 K23719 SAC3; nuclear mRNA export protein SAC3 D Nuclear pore complex E 110100106 nuclear-pore anchor K09291 TPR; nucleoprotein TPR E 110110339 protein RAE1 K14298 RAE1; mRNA export factor E 110104877 protein transport protein SEC13 homolog B K14004 SEC13; protein transport protein SEC13 E 110094316 nuclear pore complex protein NUP85 K14304 NUP85; nuclear pore complex protein Nup85 E 110112308 nuclear pore complex protein NUP43 K14305 NUP43; nuclear pore complex protein Nup43 E 110107677 uncharacterized protein LOC110107677 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50 E 110092512 nuclear pore complex protein NUP54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54 E 110104405 nuclear pore complex protein NUP62 K14306 NUP62; nuclear pore complex protein Nup62 E 110108781 nuclear pore complex protein NUP88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88 E 110109483 nuclear pore complex protein NUP93A K14309 NUP93; nuclear pore complex protein Nup93 E 110109694 nuclear pore complex protein NUP96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 110113459 nuclear pore complex protein NUP98A isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 110113222 nuclear pore complex protein NUP107 K14301 NUP107; nuclear pore complex protein Nup107 E 110112578 nuclear pore complex protein NUP133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133 E 110098887 uncharacterized protein LOC110098887 K14311 NUP188; nuclear pore complex protein Nup188 E 110111562 nuclear pore complex protein NUP155 K14312 NUP155; nuclear pore complex protein Nup155 E 110100214 nuclear pore complex protein NUP160 isoform X1 K14303 NUP160; nuclear pore complex protein Nup160 E 110098687 nuclear pore complex protein NUP35-like K14313 NUP35; nuclear pore complex protein Nup53 E 110097085 nuclear pore complex protein NUP35 K14313 NUP35; nuclear pore complex protein Nup53 E 110108549 nuclear pore complex protein NUP205 isoform X3 K14310 NUP205; nuclear pore complex protein Nup205 E 110104645 nuclear pore complex protein GP210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210 E 110111427 nuclear pore complex protein NUP214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214 E 110100063 nuclear pore complex protein NUP58 isoform X1 K14307 NUPL1; nucleoporin p58/p45 E 110106272 zinc finger CCCH domain-containing protein 46 K14321 NUPL2; nucleoporin-like protein 2 E 110095371 uncharacterized protein LOC110095371 isoform X1 K14315 NDC1; nucleoporin NDC1 E 110113382 protein SEH1 K14299 SEH1; nucleoporin SEH1 E 110110412 aladin K14320 AAAS; aladin E 110099443 protein GLE1 K18723 GLE1; nucleoporin GLE1 D Ran-mediated transport factors E 110110915 GTP-binding nuclear protein Ran-A1-like K07936 RAN; GTP-binding nuclear protein Ran E 110114859 GTP-binding nuclear protein Ran-A1 K07936 RAN; GTP-binding nuclear protein Ran E 110110197 GTP-binding nuclear protein Ran1-like K07936 RAN; GTP-binding nuclear protein Ran E 110094714 plant UBX domain-containing protein 10 K18726 FAF2; FAS-associated factor 2 E 110100457 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2 E 110111119 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase E 110094823 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase E 110095672 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase E 110107634 protein N-lysine methyltransferase METTL21A isoform X2 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E 110094583 protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E 110092069 protein EXPORTIN 1A K14290 XPO1; exportin-1 E 110093130 exportin-7-A isoform X1 K18460 XPO7; exportin-7 E 110100319 RAN GTPase-activating protein 2 K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 110098506 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E E 110107995 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E E 110106685 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E E 110111757 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E E 110091788 eukaryotic initiation factor 4A-3-like K03257 EIF4A; translation initiation factor 4A E 110105308 eukaryotic initiation factor 4A-15 K03257 EIF4A; translation initiation factor 4A E 110106271 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A E 110114899 eukaryotic initiation factor 4A-6-like K03257 EIF4A; translation initiation factor 4A E 110105944 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G E 110096562 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G E 110106894 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G E 110092698 protein PIR K05749 CYFIP; cytoplasmic FMR1 interacting protein E 110102032 DEAD-box ATP-dependent RNA helicase 52C isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 110095452 DEAD-box ATP-dependent RNA helicase 52B K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 110111799 uncharacterized protein LOC110111799 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 110098814 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein E 110099468 30S ribosomal protein 2, chloroplastic K13126 PABPC; polyadenylate-binding protein E 110112258 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein E 110114815 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein E 110095337 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein E 110104180 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein E 110112745 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein E 110102775 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence E 110107621 translation machinery-associated protein 22 K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 110106217 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago E 110106203 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E 110111589 glycine-rich RNA-binding protein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110111316 UBP1-associated protein 2A isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110112463 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110111350 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110101090 heterogeneous nuclear ribonucleoprotein A3 homolog 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110107127 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110102782 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110111419 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110113258 glycine-rich RNA-binding protein 3, mitochondrial K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110114301 UBP1-associated protein 2B K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110106206 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110096771 glycine-rich RNA-binding protein 10 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110101240 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 114578330 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110105297 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi E 110096886 DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi E 110096571 heterogeneous nuclear ribonucleoprotein D-like-B K14411 MSI; RNA-binding protein Musashi E 110099651 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi E 110104680 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi E 110106689 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi E 110095235 RNA-binding protein 1 K14411 MSI; RNA-binding protein Musashi E 110096274 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi E 110107114 RNA-binding protein 1-like K14411 MSI; RNA-binding protein Musashi E 110098305 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi E 110101230 DAZ-associated protein 1 K14411 MSI; RNA-binding protein Musashi E 110109956 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein E 110115439 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein E 110107746 protein PELOTA 1 isoform X1 K06965 PELO; protein pelota E 110093927 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2 E 110096238 polyadenylate-binding protein 2-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2 E 110109172 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2 E 110102006 DEAD-box ATP-dependent RNA helicase 38 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 110113825 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 E 110109605 protein MODIFIER OF SNC1 11 isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein E 110115965 transcription factor Pur-alpha 1 K21772 PURA; transcriptional activator protein Pur-alpha E 110108397 transcription factor Pur-alpha 1 K21772 PURA; transcriptional activator protein Pur-alpha E 110113068 zinc finger CCCH domain-containing protein 34 isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 E 110109617 SAC3 family protein A isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 110098254 eukaryotic peptide chain release factor subunit 1-2 K03265 ETF1; peptide chain release factor subunit 1 E 110096044 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1 E 110112202 eukaryotic peptide chain release factor subunit 1-2-like K03265 ETF1; peptide chain release factor subunit 1 E 110094194 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3 E 110092350 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3 E 110104736 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 110114751 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 110100855 regulator of nonsense transcripts UPF2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2 E 110097530 regulator of nonsense transcripts UPF3 K14328 UPF3; regulator of nonsense transcripts 3 E 110099116 regulator of nonsense transcripts UPF3 isoform X3 K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 110091860 serine/threonine-protein phosphatase PP2A-1 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 110108950 serine/threonine-protein phosphatase PP2A-3 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 110102169 serine/threonine-protein phosphatase PP2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 110112247 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 110094524 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 110116397 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 110101648 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 110100699 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 110095625 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 110114264 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 110107990 serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 110096285 serine/threonine protein phosphatase 2A regulatory subunit B''beta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 110100169 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 110096177 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 110116491 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 110092614 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 110110871 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 110098177 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 110116604 uncharacterized protein LOC110116604 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 110106835 protein SMG7 K14409 SMG7; protein SMG7 E 110097908 uncharacterized protein LOC110097908 K18734 SMG8; protein SMG8 E 110097512 protein SMG9 K18735 SMG9; protein SMG9 E 110111799 uncharacterized protein LOC110111799 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein C Factors involved in mRNA localization D Cargo complex E 110114036 pumilio homolog 24 isoform X1 K14844 PUF6; pumilio homology domain family member 6 E 110094338 myosin-12 K10357 MYO5; myosin V E 110106995 myosin-2-like K10357 MYO5; myosin V E 110099775 myosin-3 K10357 MYO5; myosin V E 110109295 myosin-9 K10357 MYO5; myosin V E 110111306 myosin-17 isoform X1 K10357 MYO5; myosin V E 110115081 myosin-6 K10357 MYO5; myosin V E 110095675 protein OPAQUE1 K10357 MYO5; myosin V E 110106269 uncharacterized protein LOC110106269 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals D Trans-acting binding proteins E 110112050 far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein E 110092962 far upstream element-binding protein 2 isoform X1 K13210 FUBP; far upstream element-binding protein E 110108190 far upstream element-binding protein 1-like isoform X1 K13210 FUBP; far upstream element-binding protein E 110109249 far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein E 110098189 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha E 110113826 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 110112601 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 110105841 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha E 110098184 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 110111039 elongation factor 1-gamma 2-like K03233 EEF1G; elongation factor 1-gamma E 110096355 elongation factor 1-gamma 2 K03233 EEF1G; elongation factor 1-gamma E 110111424 probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 D Other mRNA localization factors E 110092698 protein PIR K05749 CYFIP; cytoplasmic FMR1 interacting protein E 110105547 flowering locus K homology domain isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110106742 KH domain-containing protein HEN4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110098028 RNA-binding KH domain-containing protein RCF3 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110114873 KH domain-containing protein At4g18375-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110106086 KH domain-containing protein At4g18375 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110112146 KH domain-containing protein HEN4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110116635 KH domain-containing protein At4g18375 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110107812 RNA-binding KH domain-containing protein PEPPER K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110101452 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110110471 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110105244 RNA-binding KH domain-containing protein PEPPER K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 110094408 RNA-binding KH domain-containing protein RCF3 K21444 PCBP3_4; poly(rC)-binding protein 3/4 C mRNA cycle factors D Common to processing body (P body) and stress granule E 110094445 protein argonaute MEL1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 110103520 protein argonaute 7 K11593 ELF2C; eukaryotic translation initiation factor 2C E 110110892 protein argonaute 7-like K11593 ELF2C; eukaryotic translation initiation factor 2C E 110116421 protein argonaute 1A-like K11593 ELF2C; eukaryotic translation initiation factor 2C E 110116419 protein argonaute 1B K11593 ELF2C; eukaryotic translation initiation factor 2C E 110097550 protein argonaute 1A-like K11593 ELF2C; eukaryotic translation initiation factor 2C E 110098812 protein argonaute MEL1-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 110108658 protein argonaute 4B K11593 ELF2C; eukaryotic translation initiation factor 2C E 110092613 protein argonaute 16 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 110097598 protein argonaute 1C-like K11593 ELF2C; eukaryotic translation initiation factor 2C E 110095304 protein argonaute 4B-like K11593 ELF2C; eukaryotic translation initiation factor 2C E 110096476 protein argonaute 10 K11593 ELF2C; eukaryotic translation initiation factor 2C E 110106297 protein argonaute PNH1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 110098506 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E E 110107995 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E E 110106685 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E E 110111757 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E E 110104736 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 110114751 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 110102032 DEAD-box ATP-dependent RNA helicase 52C isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 110095452 DEAD-box ATP-dependent RNA helicase 52B K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 110104304 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 110098903 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 110102950 DEAD-box ATP-dependent RNA helicase 8 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 110106377 protein decapping 5 isoform X1 K18749 LSM14; protein LSM14 E 110101077 protein decapping 5 isoform X1 K18749 LSM14; protein LSM14 E 110101781 protein decapping 5 K18749 LSM14; protein LSM14 E 114578740 uncharacterized protein LOC114578740 K18749 LSM14; protein LSM14 E 110108027 probable RNA helicase SDE3 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 110102524 putative helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 110096174 transportin-1 K18752 TNPO1; transportin-1 E 110116604 uncharacterized protein LOC110116604 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 110106835 protein SMG7 K14409 SMG7; protein SMG7 E 110106931 zinc finger CCCH domain-containing protein 9 isoform X1 K18753 ZFP36L; butyrate response factor E 110107701 zinc finger CCCH domain-containing protein 9-like isoform X2 K18753 ZFP36L; butyrate response factor E 110096150 zinc finger CCCH domain-containing protein 14 K18753 ZFP36L; butyrate response factor E 110109251 zinc finger CCCH domain-containing protein 9-like K18753 ZFP36L; butyrate response factor E 110100638 putative protein TPRXL K18753 ZFP36L; butyrate response factor E 110111589 glycine-rich RNA-binding protein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110111316 UBP1-associated protein 2A isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110112463 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110111350 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110101090 heterogeneous nuclear ribonucleoprotein A3 homolog 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110107127 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110102782 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110111419 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110113258 glycine-rich RNA-binding protein 3, mitochondrial K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110114301 UBP1-associated protein 2B K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110106206 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110096771 glycine-rich RNA-binding protein 10 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110101240 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 114578330 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 110105697 la-related protein 1C isoform X2 K18757 LARP1; la-related protein 1 E 110102103 la-related protein 1B K18757 LARP1; la-related protein 1 E 110107123 la-related protein 1A isoform X1 K18757 LARP1; la-related protein 1 E 110106824 la-related protein 1C K18757 LARP1; la-related protein 1 E 110110856 la-related protein 1B K18757 LARP1; la-related protein 1 D P-body specific factors E 110101724 mRNA-decapping enzyme subunit 2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 110109056 mRNA-decapping enzyme-like protein isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 110113629 sm-like protein LSM1B isoform X2 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 110110410 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 110107052 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 110102905 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 110094288 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 110103825 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 110103273 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 110103467 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 110109630 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 110095255 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 110094338 myosin-12 K10357 MYO5; myosin V E 110106995 myosin-2-like K10357 MYO5; myosin V E 110099775 myosin-3 K10357 MYO5; myosin V E 110109295 myosin-9 K10357 MYO5; myosin V E 110111306 myosin-17 isoform X1 K10357 MYO5; myosin V E 110115081 myosin-6 K10357 MYO5; myosin V E 110095675 protein OPAQUE1 K10357 MYO5; myosin V E 110107996 tubulin alpha-3 chain K07374 TUBA; tubulin alpha E 110103162 tubulin alpha-3 chain K07374 TUBA; tubulin alpha E 110096256 tubulin alpha chain K07374 TUBA; tubulin alpha E 110105216 tubulin alpha-3 chain K07374 TUBA; tubulin alpha E 110098014 tubulin alpha-4 chain isoform X1 K07374 TUBA; tubulin alpha E 110113164 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 110108989 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 110108659 probable NOT transcription complex subunit VIP2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 110093016 CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 110105533 uncharacterized protein LOC110105533 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 110116538 uncharacterized protein LOC110116538 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 110107830 uncharacterized protein LOC110107830 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 110095463 carbon catabolite repressor protein 4 homolog 1 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110105603 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110105217 carbon catabolite repressor protein 4 homolog 1 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110094547 carbon catabolite repressor protein 4 homolog 2-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110109508 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110094881 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110102672 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110096968 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110096969 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110096971 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110110048 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110110064 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100329 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100330 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100332 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100687 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100695 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110101423 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110092653 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110111420 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110113923 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110095140 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110113153 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 110092804 protein PAT1 homolog 2 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110103391 protein PAT1 homolog 2 isoform X2 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110101070 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110096843 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110099031 enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 110112327 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 110100855 regulator of nonsense transcripts UPF2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2 E 110097530 regulator of nonsense transcripts UPF3 K14328 UPF3; regulator of nonsense transcripts 3 E 110099116 regulator of nonsense transcripts UPF3 isoform X3 K14328 UPF3; regulator of nonsense transcripts 3 E 110110378 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 110109063 YTH domain-containing protein ECT4 isoform X1 K20102 YTHDF; YTH domain-containing family protein E 110098712 YTH domain-containing protein ECT4 K20102 YTHDF; YTH domain-containing family protein E 110115303 YTH domain-containing protein ECT4 K20102 YTHDF; YTH domain-containing family protein E 110106381 YTH domain-containing protein ECT4 isoform X1 K20102 YTHDF; YTH domain-containing family protein E 110112663 YTH domain-containing protein ECT4 K20102 YTHDF; YTH domain-containing family protein E 110099847 YTH domain-containing protein ECT4 K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 110106292 oligouridylate-binding protein 1B K13201 TIA1; nucleolysin TIA-1/TIAR E 110113618 oligouridylate-binding protein 1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 110110418 oligouridylate-binding protein 1-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 110098814 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein E 110099468 30S ribosomal protein 2, chloroplastic K13126 PABPC; polyadenylate-binding protein E 110112258 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein E 110114815 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein E 110095337 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein E 110104180 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein E 110112745 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein E 110102725 ras GTPase-activating protein-binding protein 2 isoform X3 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 110103447 ras GTPase-activating protein-binding protein 1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 110105652 putative G3BP-like protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 110093581 eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A E 110097542 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 110091788 eukaryotic initiation factor 4A-3-like K03257 EIF4A; translation initiation factor 4A E 110105308 eukaryotic initiation factor 4A-15 K03257 EIF4A; translation initiation factor 4A E 110106271 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A E 110114899 eukaryotic initiation factor 4A-6-like K03257 EIF4A; translation initiation factor 4A E 110096025 ATP-dependent RNA helicase DBP5-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 110104482 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 110105944 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G E 110096562 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G E 110106894 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G E 110108945 guanine nucleotide-binding protein subunit beta-like protein A K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 110114412 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 110092863 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 110114881 guanine nucleotide-binding protein subunit beta-like protein A K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 110110036 tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3 B mRNA degradation factors C 5'-3' decay D Decapping complex E 110109056 mRNA-decapping enzyme-like protein isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 110101724 mRNA-decapping enzyme subunit 2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 110104304 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 110098903 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 110102950 DEAD-box ATP-dependent RNA helicase 8 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 110099031 enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 110112327 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 110092804 protein PAT1 homolog 2 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110103391 protein PAT1 homolog 2 isoform X2 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110101070 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 110096843 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E 110113629 sm-like protein LSM1B isoform X2 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 110110410 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 110107052 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 110102905 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 110094288 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 110103825 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 110103273 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 110103467 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 110109630 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 110095255 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 110098478 5'-3' exoribonuclease 3 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] E 110094380 5'-3' exoribonuclease 4 K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-] D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors E 110116560 exosome complex component CSL4 isoform X2 K07573 CSL4; exosome complex component CSL4 E 110094053 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4 E 110096579 putative exosome complex component rrp40 isoform X2 K03681 RRP40; exosome complex component RRP40 E 110100460 putative exosome complex component rrp40 isoform X1 K03681 RRP40; exosome complex component RRP40 E 110109687 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41 E 110092002 exosome complex exonuclease RRP46 homolog isoform X1 K12590 RRP46; exosome complex component RRP46 E 110108611 exosome complex component RRP41-like isoform X1 K12587 MTR3; exosome complex component MTR3 E 110112120 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42 E 110102484 exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43 E 110101363 exosome complex component RRP45A isoform X1 K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E 110101369 exosome complex exonuclease RRP44 homolog A K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E 110100431 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 110093078 nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1 E 110108908 uncharacterized protein LOC110108908 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 110115711 terminal nucleotidyltransferase 4A isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 110099286 DExH-box ATP-dependent RNA helicase DExH10-like K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] E 110107726 DExH-box ATP-dependent RNA helicase DExH9 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] E 110096722 DExH-box ATP-dependent RNA helicase DExH10 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 110111294 tetratricopeptide repeat protein SKI3 K12600 SKI3; superkiller protein 3 E 110102776 WD repeat-containing protein VIP3 K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 110095463 carbon catabolite repressor protein 4 homolog 1 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110105603 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110105217 carbon catabolite repressor protein 4 homolog 1 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110094547 carbon catabolite repressor protein 4 homolog 2-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 110113164 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 110108989 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 110108659 probable NOT transcription complex subunit VIP2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 110093016 CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 110105533 uncharacterized protein LOC110105533 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 110116538 uncharacterized protein LOC110116538 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 110107830 uncharacterized protein LOC110107830 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 110109508 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110094881 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110102672 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110096968 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110096969 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110096971 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110110048 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110110064 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100329 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100330 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100332 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100687 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110100695 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110101423 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110092653 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110111420 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110113923 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110095140 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 110109974 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 110097664 cell differentiation protein rcd1 isoform X2 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 110093269 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 114580032 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 110106836 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 E 110099273 ABC transporter I family member 20 K12608 CAF16; CCR4-NOT complex subunit CAF16 E 110112849 ABC transporter I family member 19 isoform X1 K12608 CAF16; CCR4-NOT complex subunit CAF16 D Pan complex D Other 3'-5' decay factors E 110091890 LOW QUALITY PROTEIN: poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 110099001 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 110096803 uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 110103357 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 110115419 DExH-box ATP-dependent RNA helicase DExH6 isoform X2 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 110114772 DExH-box ATP-dependent RNA helicase DExH3 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 110109393 DExH-box ATP-dependent RNA helicase DExH1 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 110109857 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 110113520 uncharacterized protein LOC110113520 isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] E 110109544 protein NRDE2 homolog isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2 E 110097170 protein RST1 isoform X1 K27498 FOCAD; focadhesin C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 110092214 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E 110105795 uncharacterized protein LOC110105795 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E 110113386 enolase 1, chloroplastic isoform X3 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 110097543 cytosolic enolase 3 isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 110100584 enolase 2-like isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 110106793 enolase 2 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 110096178 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 110100706 polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 110111292 ATP-dependent 6-phosphofructokinase 7 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E 110103119 ATP-dependent 6-phosphofructokinase 6 isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E 110093006 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E 110105822 ATP-dependent 6-phosphofructokinase 3 isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E 110094022 ATP-dependent 6-phosphofructokinase 5, chloroplastic K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E 110112967 ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 110110271 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK E 110110012 heat shock 70 kDa protein, mitochondrial isoform X1 K04043 dnaK; molecular chaperone DnaK E 110096241 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK E 110109519 chaperonin CPN60-like 2, mitochondrial isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E 110115158 ruBisCO large subunit-binding protein subunit beta, chloroplastic K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E 110099667 chaperonin CPN60-2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E 110113849 chaperonin CPN60-like 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E 110102196 LOW QUALITY PROTEIN: chaperonin CPN60-2, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 110094053 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4 E 110116560 exosome complex component CSL4 isoform X2 K07573 CSL4; exosome complex component CSL4 D Cofactors E 110109687 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41 E 110112120 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024