+E	Ribosome biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Ribosome Biogenesis - Dehalococcoides mccartyi BAV1</h2>
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A<b>Eukaryotic type</b>
B  Sno RNPs
C    Box C/D snoRNPs
C    Box H/ACA snoRNPs
B  90S particles
C    U3 small nucleolar RNA-associated proteins
C    Helicases
C    GTPase
C    RNase
D      DehaBAV1_0908 RNAse III	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
C    Kinase
C    Other 90S particles
B  Pre-40S particles
C    Kinases
C    Export and cytoplasmic maturation factors
C    Other pre-40S particles
B  Pre-60S particles
C    Helicases
C    GTPases
C    RNases
D      RNase MRP
C    Kinases
C    Export and cytoplasmic maturation factors
C    5-FMC complex
C    Ribosome quality control proteins
C    Other pre-60S particles
B  Other ribosome biogenesis factors
C    DehaBAV1_0002 small GTP-binding protein	K03979 obgE; GTPase [EC:3.6.5.-] 
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A<b>Prokaryotic type</b>
B  Sno RNPs
C    Box C/D snoRNPs
C    Box H/ACA snoRNPs
B  rRNA transcription factors
C    DehaBAV1_1184 transcriptional regulator, TraR/DksA family	K06204 dksA; RNA polymerase-binding transcription factor 
C    DehaBAV1_0876 NusA antitermination factor	K02600 nusA; transcription termination/antitermination protein NusA 
C    DehaBAV1_1089 NusB antitermination factor	K03625 nusB; transcription antitermination protein NusB 
C    DehaBAV1_0885 transcription antitermination protein nusG	K02601 nusG; transcription termination/antitermination protein NusG 
B  rRNA modification factors
C    16S rRNA modification factors
D      DehaBAV1_0383 dimethyladenosine transferase	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] 
D      DehaBAV1_0164 putative methyltransferase	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] 
D      DehaBAV1_0702 16S rRNA m(7)G-527 methyltransferase	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] 
D      DehaBAV1_0320 S-adenosyl-methyltransferase MraW	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] 
D      DehaBAV1_0366 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] 
C    23S rRNA modification factors
D      DehaBAV1_0947 (Uracil-5)-methyltransferase	K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] 
D      DehaBAV1_0715 ribosomal large subunit pseudouridine synthase B	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] 
D      DehaBAV1_1186 ribosomal large subunit pseudouridine synthase D	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] 
B  ribosomal protein modification factors
C    DehaBAV1_0582 [SSU ribosomal protein S18P]-alanine acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] 
C    DehaBAV1_0540 16S rRNA processing protein RimM	K02860 rimM; 16S rRNA processing protein RimM 
B  rRNA processing factors
C    DehaBAV1_0908 RNAse III	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
C    DehaBAV1_0048 Holliday junction resolvase YqgF	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] 
B  rRNA helicases
B  GTPases
C    DehaBAV1_1204 small GTP-binding protein	K03977 engA; GTPase 
C    DehaBAV1_0002 small GTP-binding protein	K03979 obgE; GTPase [EC:3.6.5.-] 
C    DehaBAV1_0667 GTP-binding protein HflX	K03665 hflX; GTPase 
B  Other maturation factors
C    DehaBAV1_0754 translation factor SUA5	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
C    DehaBAV1_0005 (p)ppGpp synthetase I, SpoT/RelA	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] 
C    DehaBAV1_0873 ribosome-binding factor A	K02834 rbfA; ribosome-binding factor A 
C    DehaBAV1_0372 iojap-like protein	K09710 ybeB; ribosome-associated protein 
C    DehaBAV1_1181 protein of unknown function UPF0054	K07042 ybeY; probable rRNA maturation factor 
C    DehaBAV1_1260 SSU ribosomal protein S30P / sigma 54 modulation protein	K05808 hpf; ribosome hibernation promoting factor 
C    DehaBAV1_0042 Protein of unknown function DUF933	K06942 ychF; ribosome-binding ATPase 
C    DehaBAV1_1085 metal-binding possibly nucleic acid-binding protein-like protein	K07040 yceD; DUF177 domain-containing protein 
#
A<b>Related small nucleolar RNAs</b>
B  Box C/D snoRNAs
C    SnoRNAs involved in processing reactions
C    SnoRNAs act as guides for 2'-O-ribose methylation
B  Box H/ACA snoRNAs
C    SnoRNAs involved in processing reactions
C    SnoRNAs act as guides for pseudouridynation
B  Other snoRNA
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#Last updated: April 22, 2024