+D GENES KO #

  KEGG Orthology (KO) - Candidatus Doolittlea endobia

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:den00010] D MHIR_DE00085 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D MHIR_DE00549 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D MHIR_DE00543 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MHIR_DE00310 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MHIR_DE00407 gapA_1; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MHIR_DE00544 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MHIR_DE00560 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MHIR_DE00154 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MHIR_DE00337 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D MHIR_DE00226 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MHIR_DE00225 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:den00020] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MHIR_DE00226 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MHIR_DE00225 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:den00030] D MHIR_DE00549 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MHIR_DE00012 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MHIR_DE00263 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D MHIR_DE00640 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D MHIR_DE00633 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D MHIR_DE00201 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MHIR_DE00302 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D MHIR_DE00543 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions D MHIR_DE00633 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:den00051] D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D MHIR_DE00543 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MHIR_DE00310 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:den00052] D MHIR_DE00085 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:den00500] D MHIR_DE00085 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D MHIR_DE00549 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:den00520] D MHIR_DE00033 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MHIR_DE00245 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MHIR_DE00085 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D MHIR_DE00549 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00620 Pyruvate metabolism [PATH:den00620] D MHIR_DE00226 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MHIR_DE00225 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MHIR_DE00510 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MHIR_DE00511 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MHIR_DE00337 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D MHIR_DE00704 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MHIR_DE00187 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MHIR_DE00316 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MHIR_DE00477 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:den00630] D MHIR_DE00168 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:den00640] D MHIR_DE00510 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MHIR_DE00511 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MHIR_DE00704 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MHIR_DE00187 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MHIR_DE00316 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MHIR_DE00477 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] C 00650 Butanoate metabolism C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism [PATH:den00562] D MHIR_DE00006 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MHIR_DE00310 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:den00190] D MHIR_DE00488 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D MHIR_DE00489 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D MHIR_DE00490 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D MHIR_DE00491 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D MHIR_DE00492 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D MHIR_DE00493 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D MHIR_DE00494 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D MHIR_DE00495 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D MHIR_DE00496 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D MHIR_DE00497 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D MHIR_DE00498 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D MHIR_DE00499 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D MHIR_DE00500 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D MHIR_DE00406 cydA; Cytochrome bd-I ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MHIR_DE00405 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MHIR_DE00404 cydX; Cytochrome bd-I ubiquinol oxidase subunit X K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D MHIR_DE00531 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D MHIR_DE00537 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MHIR_DE00593 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:den00710] D MHIR_DE00544 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MHIR_DE00407 gapA_1; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MHIR_DE00543 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MHIR_DE00201 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MHIR_DE00310 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MHIR_DE00633 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00720 Other carbon fixation pathways [PATH:den00720] D MHIR_DE00704 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MHIR_DE00187 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MHIR_DE00316 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MHIR_DE00477 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D MHIR_DE00617 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D MHIR_DE00511 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MHIR_DE00510 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:den00680] D MHIR_DE00168 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MHIR_DE00154 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MHIR_DE00543 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D MHIR_DE00510 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MHIR_DE00511 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MHIR_DE00560 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:den00061] D MHIR_DE00704 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MHIR_DE00187 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MHIR_DE00316 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MHIR_DE00477 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D MHIR_DE00220 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein D MHIR_DE00218 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MHIR_DE00217 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MHIR_DE00628 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D MHIR_DE00219 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MHIR_DE00340 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D MHIR_DE00700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D MHIR_DE00008 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:den00074] D MHIR_DE00637 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D MHIR_DE00220 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein D MHIR_DE00218 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:den00561] D MHIR_DE00447 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MHIR_DE00144 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:den00564] D MHIR_DE00447 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MHIR_DE00144 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MHIR_DE00696 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D MHIR_DE00041 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D MHIR_DE00457 psd; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D MHIR_DE00551 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D MHIR_DE00139 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D MHIR_DE00351 pgpB; Phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D MHIR_DE00599 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:den00230] D MHIR_DE00302 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D MHIR_DE00623 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D MHIR_DE00188 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D MHIR_DE00418 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MHIR_DE00419 nrdB; Ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MHIR_DE00190 spoT; Bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D MHIR_DE00596 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:den00240] D MHIR_DE00327 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MHIR_DE00326 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D MHIR_DE00694 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D MHIR_DE00153 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D MHIR_DE00684 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D MHIR_DE00513 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D MHIR_DE00418 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MHIR_DE00419 nrdB; Ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MHIR_DE00455 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D MHIR_DE00627 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MHIR_DE00431 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism D MHIR_DE00327 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MHIR_DE00326 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00260 Glycine, serine and threonine metabolism [PATH:den00260] D MHIR_DE00168 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MHIR_DE00560 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MHIR_DE00041 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D MHIR_DE00320 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D MHIR_DE00321 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism C 00280 Valine, leucine and isoleucine degradation [PATH:den00280] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:den00300] D MHIR_DE00652 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D MHIR_DE00115 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MHIR_DE00116 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D MHIR_DE00327 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MHIR_DE00326 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00330 Arginine and proline metabolism D MHIR_DE00253 speG; Spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] C 00340 Histidine metabolism C 00350 Tyrosine metabolism C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:den00400] D MHIR_DE00186 aroQ_1; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D MHIR_DE00317 aroQ_2; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D MHIR_DE00632 aroK; Shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71] D MHIR_DE00325 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D MHIR_DE00324 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D MHIR_DE00323 trpGD; Bifunctional protein TrpGD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D MHIR_DE00322 trpC; Tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D MHIR_DE00320 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D MHIR_DE00321 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D MHIR_DE00354 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:den00430] D MHIR_DE00511 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MHIR_DE00510 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:den00450] D MHIR_DE00426 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D MHIR_DE00600 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MHIR_DE00052 metG_1; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D MHIR_DE00168 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:den00470] D MHIR_DE00264 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MHIR_DE00118 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:den00480] D MHIR_DE00640 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D MHIR_DE00012 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:den00540] D MHIR_DE00701 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D MHIR_DE00124 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D MHIR_DE00699 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D MHIR_DE00620 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D MHIR_DE00702 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D MHIR_DE00314 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D MHIR_DE00018 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D MHIR_DE00420 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D MHIR_DE00483 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D MHIR_DE00601 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D MHIR_DE00602 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis [PATH:den00550] D MHIR_DE00033 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MHIR_DE00245 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MHIR_DE00121 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MHIR_DE00118 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MHIR_DE00115 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MHIR_DE00264 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MHIR_DE00116 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MHIR_DE00695 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MHIR_DE00117 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MHIR_DE00120 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MHIR_DE00650 mrcB; Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D MHIR_DE00059 spoVD; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:den00730] D MHIR_DE00174 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MHIR_DE00070 thiI; tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D MHIR_DE00596 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:den00740] D MHIR_DE00137 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D MHIR_DE00517 ribC; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D MHIR_DE00135 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism C 00770 Pantothenate and CoA biosynthesis [PATH:den00770] D MHIR_DE00355 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D MHIR_DE00354 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D MHIR_DE00637 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:den00780] D MHIR_DE00628 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D MHIR_DE00219 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MHIR_DE00700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D MHIR_DE00008 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D MHIR_DE00244 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:den00785] D MHIR_DE00515 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D MHIR_DE00516 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MHIR_DE00226 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MHIR_DE00225 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:den00790] D MHIR_DE00328 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] C 00670 One carbon pool by folate [PATH:den00670] D MHIR_DE00328 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MHIR_DE00617 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D MHIR_DE00168 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MHIR_DE00177 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MHIR_DE00431 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:den00860] D MHIR_DE00284 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHIR_DE00542 hemG; Protoporphyrinogen IX dehydrogenase [menaquinone] K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D MHIR_DE00597 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:den00900] D MHIR_DE00247 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D MHIR_DE00068 ispA; Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D MHIR_DE00695 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D MHIR_DE00201 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis D MHIR_DE00652 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:den00521] D MHIR_DE00085 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D MHIR_DE00006 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D MHIR_DE00085 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D MHIR_DE00325 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D MHIR_DE00324 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D MHIR_DE00218 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MHIR_DE00219 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MHIR_DE00008 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D MHIR_DE00220 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:den03020] D MHIR_DE00378 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MHIR_DE00377 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MHIR_DE00562 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MHIR_DE00189 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:den03010] D MHIR_DE00683 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MHIR_DE00691 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MHIR_DE00582 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MHIR_DE00563 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MHIR_DE00571 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MHIR_DE00249 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MHIR_DE00642 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MHIR_DE00574 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MHIR_DE00037 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MHIR_DE00589 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MHIR_DE00564 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MHIR_DE00643 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MHIR_DE00565 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MHIR_DE00575 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MHIR_DE00669 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MHIR_DE00026 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MHIR_DE00579 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MHIR_DE00251 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MHIR_DE00584 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MHIR_DE00136 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MHIR_DE00624 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D MHIR_DE00381 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MHIR_DE00585 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MHIR_DE00588 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MHIR_DE00587 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MHIR_DE00576 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MHIR_DE00573 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MHIR_DE00379 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MHIR_DE00252 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MHIR_DE00380 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MHIR_DE00382 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MHIR_DE00036 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MHIR_DE00578 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MHIR_DE00569 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MHIR_DE00581 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MHIR_DE00561 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MHIR_DE00572 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MHIR_DE00029 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MHIR_DE00048 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MHIR_DE00246 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MHIR_DE00583 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MHIR_DE00586 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MHIR_DE00577 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MHIR_DE00605 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D MHIR_DE00598 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MHIR_DE00089 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MHIR_DE00580 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MHIR_DE00570 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D MHIR_DE00161 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MHIR_DE00215 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MHIR_DE00088 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D MHIR_DE00270 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MHIR_DE00049 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MHIR_DE00567 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MHIR_DE00408 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MHIR_DE00443 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MHIR_DE00442 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:den00970] D MHIR_DE00285 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MHIR_DE00294 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MHIR_DE00356 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00191 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00306 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00616 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MHIR_DE00441 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MHIR_DE00429 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MHIR_DE00399 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MHIR_DE00444 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MHIR_DE00388 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MHIR_DE00456 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MHIR_DE00307 tRNA-His K14226 tRNA-His; tRNA His D MHIR_DE00409 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MHIR_DE00280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00343 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D MHIR_DE00400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00430 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00468 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00282 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MHIR_DE00711 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MHIR_DE00487 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00281 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00398 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00467 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00653 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MHIR_DE00221 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MHIR_DE00255 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MHIR_DE00308 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MHIR_DE00030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00192 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00369 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00609 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00387 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MHIR_DE00390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MHIR_DE00594 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MHIR_DE00410 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MHIR_DE00389 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MHIR_DE00283 tRNA-Val K14237 tRNA-Val; tRNA Val D MHIR_DE00149 tRNA-Val K14237 tRNA-Val; tRNA Val D MHIR_DE00284 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHIR_DE00481 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MHIR_DE00194 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MHIR_DE00501 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MHIR_DE00630 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MHIR_DE00376 glyQ_1; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MHIR_DE00397 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MHIR_DE00051 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MHIR_DE00465 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MHIR_DE00618 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MHIR_DE00052 metG_1; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MHIR_DE00177 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MHIR_DE00393 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MHIR_DE00063 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MHIR_DE00134 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MHIR_DE00195 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MHIR_DE00371 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MHIR_DE00132 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MHIR_DE00299 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MHIR_DE00047 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MHIR_DE00046 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MHIR_DE00146 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MHIR_DE00635 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:den03060] D MHIR_DE00568 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MHIR_DE00384 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MHIR_DE00469 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MHIR_DE00159 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D MHIR_DE00160 secF; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D MHIR_DE00158 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MHIR_DE00268 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MHIR_DE00127 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MHIR_DE00415 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D MHIR_DE00025 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MHIR_DE00254 Bacteria_small_SRP K01983 ffs; SRP RNA D MHIR_DE00506 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MHIR_DE00002 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MHIR_DE00133 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:den04122] D MHIR_DE00174 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MHIR_DE00509 tusA; Sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D MHIR_DE00644 tusB; Protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D MHIR_DE00645 dsrF; Intracellular sulfur oxidation protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D MHIR_DE00370 tusD; Sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D MHIR_DE00319 tusE; Sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D MHIR_DE00095 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MHIR_DE00070 thiI; tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:den03018] D MHIR_DE00452 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D MHIR_DE00210 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D MHIR_DE00154 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MHIR_DE00667 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MHIR_DE00235 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D MHIR_DE00666 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MHIR_DE00274 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D MHIR_DE00373 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MHIR_DE00412 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MHIR_DE00238 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D MHIR_DE00647 pcnB; Poly(A) polymerase I precursor K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:den03030] D MHIR_DE00042 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MHIR_DE00703 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MHIR_DE00227 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MHIR_DE00454 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MHIR_DE00061 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MHIR_DE00611 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MHIR_DE00347 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MHIR_DE00625 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MHIR_DE00348 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MHIR_DE00043 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MHIR_DE00659 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:den03410] D MHIR_DE00677 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MHIR_DE00147 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D MHIR_DE00655 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MHIR_DE00197 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MHIR_DE00659 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:den03420] D MHIR_DE00521 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D MHIR_DE00439 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MHIR_DE00659 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:den03430] D MHIR_DE00072 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MHIR_DE00439 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MHIR_DE00073 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D MHIR_DE00069 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D MHIR_DE00197 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MHIR_DE00348 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MHIR_DE00703 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MHIR_DE00611 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MHIR_DE00227 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MHIR_DE00061 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MHIR_DE00454 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MHIR_DE00042 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MHIR_DE00659 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:den03440] D MHIR_DE00197 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MHIR_DE00348 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MHIR_DE00475 recA; Protein RecA K03553 recA; recombination protein RecA D MHIR_DE00363 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D MHIR_DE00364 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MHIR_DE00362 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MHIR_DE00464 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D MHIR_DE00463 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D MHIR_DE00707 recD2_2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D MHIR_DE00703 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MHIR_DE00611 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MHIR_DE00227 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MHIR_DE00061 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MHIR_DE00454 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MHIR_DE00042 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MHIR_DE00162 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D MHIR_DE00250 priB; Primosomal replication protein n K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:den02010] D MHIR_DE00022 mlaC; putative phospholipid-binding protein MlaC precursor K07323 mlaC; phospholipid transport system substrate-binding protein D MHIR_DE00021 mlaD; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MHIR_DE00020 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MHIR_DE00023 mlaB; putative phospholipid ABC transporter-binding protein MlaB K07122 mlaB; phospholipid transport system transporter-binding protein D MHIR_DE00019 mlaF; putative phospholipid import ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MHIR_DE00518 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein D MHIR_DE00520 lolC; Lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein D MHIR_DE00519 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D MHIR_DE00395 lptF; Lipopolysaccharide export system permease protein LptF K07091 lptF; lipopolysaccharide export system permease protein D MHIR_DE00396 lptG; Lipopolysaccharide export system permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein D MHIR_DE00014 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D MHIR_DE00313 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D MHIR_DE00260 yheH; putative multidrug resistance ABC transporter ATP-binding/permease protein YheH K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D MHIR_DE00261 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) D MHIR_DE00722 ptsN; Nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:den03070] D MHIR_DE00159 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D MHIR_DE00160 secF; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D MHIR_DE00384 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MHIR_DE00469 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MHIR_DE00568 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MHIR_DE00158 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MHIR_DE00268 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MHIR_DE00127 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MHIR_DE00506 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MHIR_DE00415 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D MHIR_DE00025 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:den02020] D MHIR_DE00099 phoQ; Virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D MHIR_DE00098 phoP_1; Virulence transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D MHIR_DE00031 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C D MHIR_DE00336 phoP_2; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07662 cpxR; two-component system, OmpR family, response regulator CpxR D MHIR_DE00612 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MHIR_DE00406 cydA; Cytochrome bd-I ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MHIR_DE00405 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MHIR_DE00404 cydX; Cytochrome bd-I ubiquinol oxidase subunit X K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:den02024] D MHIR_DE00238 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D MHIR_DE00325 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D MHIR_DE00324 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D MHIR_DE00440 zur; Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D MHIR_DE00268 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MHIR_DE00384 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MHIR_DE00469 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MHIR_DE00568 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MHIR_DE00158 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MHIR_DE00127 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MHIR_DE00506 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MHIR_DE00415 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D MHIR_DE00025 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D MHIR_DE00626 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D MHIR_DE00154 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:den01501] D MHIR_DE00031 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C D MHIR_DE00059 spoVD; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:den01502] D MHIR_DE00264 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MHIR_DE00116 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MHIR_DE00117 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MHIR_DE00120 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:den01503] D MHIR_DE00099 phoQ; Virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D MHIR_DE00098 phoP_1; Virulence transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D MHIR_DE00336 phoP_2; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07662 cpxR; two-component system, OmpR family, response regulator CpxR D MHIR_DE00242 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MHIR_DE00701 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:den01000] C 01001 Protein kinases [BR:den01001] D MHIR_DE00099 phoQ; Virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:den01009] D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:den01002] D MHIR_DE00133 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D MHIR_DE00071 yajL; Chaperone protein YajL K03152 thiJ; protein deglycase [EC:3.5.1.124] D MHIR_DE00658 ybiS; putative L,D-transpeptidase YbiS precursor K19235 ybiS; L,D-transpeptidase YbiS D MHIR_DE00064 prlC; Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D MHIR_DE00446 mepM; Murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D MHIR_DE00688 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D MHIR_DE00182 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MHIR_DE00129 htpX; Protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D MHIR_DE00034 degQ; Periplasmic pH-dependent serine endoprotease DegQ precursor K04772 degQ; serine protease DegQ [EC:3.4.21.-] D MHIR_DE00105 clpP; ATP-dependent Clp protease proteolytic subunit precursor K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D MHIR_DE00107 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D MHIR_DE00341 lon1; Lon protease 1 K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D MHIR_DE00448 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D MHIR_DE00002 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MHIR_DE00199 sppA; Protease 4 K04773 sppA; protease IV [EC:3.4.21.-] D MHIR_DE00155 pmbA; peptidase PmbA K03592 pmbA; PmbA protein D MHIR_DE00293 tldD; protease TldD K03568 tldD; TldD protein D MHIR_DE00236 hflC; Modulator of FtsH protease HflC K04087 hflC; modulator of FtsH protease HflC D MHIR_DE00237 hflK; Modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:den01003] D MHIR_DE00650 mrcB; Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:den01005] D MHIR_DE00701 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D MHIR_DE00702 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D MHIR_DE00124 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D MHIR_DE00699 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D MHIR_DE00620 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D MHIR_DE00314 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D MHIR_DE00602 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D MHIR_DE00601 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D MHIR_DE00420 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D MHIR_DE00483 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D MHIR_DE00018 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:den01011] D MHIR_DE00033 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MHIR_DE00245 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MHIR_DE00121 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MHIR_DE00118 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MHIR_DE00115 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MHIR_DE00264 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MHIR_DE00117 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MHIR_DE00120 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MHIR_DE00204 murJ; putative peptidoglycan biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D MHIR_DE00650 mrcB; Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D MHIR_DE00059 spoVD; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MHIR_DE00658 ybiS; putative L,D-transpeptidase YbiS precursor K19235 ybiS; L,D-transpeptidase YbiS D MHIR_DE00446 mepM; Murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D MHIR_DE00242 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MHIR_DE00318 amiD; N-acetylmuramoyl-L-alanine amidase AmiD precursor K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MHIR_DE00428 lpp; Major outer membrane lipoprotein Lpp precursor K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:den01004] D MHIR_DE00218 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MHIR_DE00217 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MHIR_DE00628 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D MHIR_DE00219 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MHIR_DE00340 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D MHIR_DE00700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D MHIR_DE00008 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D MHIR_DE00447 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MHIR_DE00144 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:den01006] D MHIR_DE00068 ispA; Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D MHIR_DE00695 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MHIR_DE00239 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:den01007] D MHIR_DE00284 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHIR_DE00481 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MHIR_DE00146 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MHIR_DE00635 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MHIR_DE00618 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MHIR_DE00371 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MHIR_DE00052 metG_1; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MHIR_DE00134 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MHIR_DE00393 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MHIR_DE00063 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MHIR_DE00195 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MHIR_DE00501 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MHIR_DE00630 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MHIR_DE00299 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MHIR_DE00376 glyQ_1; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MHIR_DE00397 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MHIR_DE00465 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MHIR_DE00132 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MHIR_DE00051 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MHIR_DE00194 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MHIR_DE00047 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MHIR_DE00046 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:den00194] D MHIR_DE00537 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MHIR_DE00531 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:den03000] D MHIR_DE00206 gltC; HTH-type transcriptional regulator GltC K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D MHIR_DE00678 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D MHIR_DE00222 slyA; Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D MHIR_DE00440 zur; Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D MHIR_DE00608 fnr; Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D MHIR_DE00244 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MHIR_DE00547 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D MHIR_DE00648 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:den03021] D MHIR_DE00562 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MHIR_DE00378 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MHIR_DE00377 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MHIR_DE00189 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MHIR_DE00626 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D MHIR_DE00502 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D MHIR_DE00674 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D MHIR_DE00138 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D MHIR_DE00383 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MHIR_DE00648 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D MHIR_DE00179 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D MHIR_DE00274 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:den03019] D MHIR_DE00210 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D MHIR_DE00004 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MHIR_DE00235 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D MHIR_DE00522 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D MHIR_DE00666 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MHIR_DE00154 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MHIR_DE00667 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MHIR_DE00274 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D MHIR_DE00287 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D MHIR_DE00373 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MHIR_DE00412 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MHIR_DE00238 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D MHIR_DE00647 pcnB; Poly(A) polymerase I precursor K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D MHIR_DE00452 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:den03011] D MHIR_DE00683 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MHIR_DE00691 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MHIR_DE00582 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MHIR_DE00563 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MHIR_DE00571 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MHIR_DE00249 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MHIR_DE00642 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MHIR_DE00574 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MHIR_DE00037 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MHIR_DE00589 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MHIR_DE00564 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MHIR_DE00643 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MHIR_DE00565 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MHIR_DE00575 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MHIR_DE00669 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MHIR_DE00026 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MHIR_DE00579 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MHIR_DE00251 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MHIR_DE00584 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MHIR_DE00136 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MHIR_DE00624 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D MHIR_DE00381 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MHIR_DE00585 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MHIR_DE00588 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MHIR_DE00587 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MHIR_DE00576 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MHIR_DE00573 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MHIR_DE00252 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MHIR_DE00380 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MHIR_DE00382 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MHIR_DE00379 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MHIR_DE00036 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MHIR_DE00578 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MHIR_DE00569 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MHIR_DE00581 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MHIR_DE00561 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MHIR_DE00572 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MHIR_DE00029 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MHIR_DE00048 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MHIR_DE00246 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MHIR_DE00583 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MHIR_DE00586 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MHIR_DE00577 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MHIR_DE00598 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MHIR_DE00089 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MHIR_DE00580 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MHIR_DE00570 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D MHIR_DE00161 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MHIR_DE00215 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MHIR_DE00088 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D MHIR_DE00270 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MHIR_DE00049 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MHIR_DE00567 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MHIR_DE00605 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D MHIR_DE00442 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MHIR_DE00408 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MHIR_DE00443 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:den03009] D MHIR_DE00004 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MHIR_DE00522 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D MHIR_DE00005 era; GTPase Era K03595 era; GTPase D MHIR_DE00450 obgE; GTPase ObgE/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D MHIR_DE00648 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D MHIR_DE00674 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D MHIR_DE00138 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D MHIR_DE00383 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MHIR_DE00163 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D MHIR_DE00345 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D MHIR_DE00507 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D MHIR_DE00111 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MHIR_DE00525 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D MHIR_DE00234 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D MHIR_DE00181 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D MHIR_DE00296 rlmN; Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D MHIR_DE00011 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MHIR_DE00212 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D MHIR_DE00471 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MHIR_DE00027 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D MHIR_DE00210 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D MHIR_DE00615 yqgF; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D MHIR_DE00666 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MHIR_DE00541 der; GTPase Der K03977 engA; GTPase D MHIR_DE00190 spoT; Bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D MHIR_DE00672 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D MHIR_DE00437 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D MHIR_DE00304 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:den03016] D MHIR_DE00142 cca; Multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D MHIR_DE00284 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHIR_DE00132 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MHIR_DE00134 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MHIR_DE00063 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MHIR_DE00052 metG_1; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MHIR_DE00481 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MHIR_DE00371 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MHIR_DE00195 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MHIR_DE00501 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MHIR_DE00194 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MHIR_DE00630 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MHIR_DE00051 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MHIR_DE00465 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MHIR_DE00618 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MHIR_DE00393 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MHIR_DE00299 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MHIR_DE00047 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MHIR_DE00046 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MHIR_DE00146 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MHIR_DE00635 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MHIR_DE00256 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MHIR_DE00656 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MHIR_DE00352 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MHIR_DE00671 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D MHIR_DE00174 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MHIR_DE00239 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MHIR_DE00266 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MHIR_DE00548 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MHIR_DE00269 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D MHIR_DE00526 RNaseP_bact_a K01978 rnpB; M1 RNA D MHIR_DE00346 rnt; Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D MHIR_DE00376 glyQ_1; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MHIR_DE00397 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MHIR_DE00484 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D MHIR_DE00028 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MHIR_DE00095 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MHIR_DE00509 tusA; Sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D MHIR_DE00644 tusB; Protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D MHIR_DE00645 dsrF; Intracellular sulfur oxidation protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D MHIR_DE00370 tusD; Sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D MHIR_DE00319 tusE; Sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D MHIR_DE00375 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D MHIR_DE00157 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D MHIR_DE00070 thiI; tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D MHIR_DE00286 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D MHIR_DE00010 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D MHIR_DE00435 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D MHIR_DE00243 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D MHIR_DE00235 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D MHIR_DE00667 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:den03012] D MHIR_DE00673 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MHIR_DE00050 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MHIR_DE00692 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D MHIR_DE00386 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D MHIR_DE00641 fusA; Elongation factor G K02355 fusA; elongation factor G D MHIR_DE00607 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D MHIR_DE00693 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor D MHIR_DE00606 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D MHIR_DE00303 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D MHIR_DE00259 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D MHIR_DE00413 efp; Elongation factor P K02356 efp; elongation factor P D MHIR_DE00196 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:den03110] D MHIR_DE00272 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D MHIR_DE00106 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D MHIR_DE00373 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MHIR_DE00412 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MHIR_DE00372 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D MHIR_DE00664 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D MHIR_DE00552 ibpA; Small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA D MHIR_DE00411 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D MHIR_DE00182 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MHIR_DE00415 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D MHIR_DE00165 surA; Chaperone SurA precursor K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D MHIR_DE00275 trxA; Thioredoxin-1 K03671 TXN; thioredoxin D MHIR_DE00434 grxD; Glutaredoxin-4 K07390 grxD; monothiol glutaredoxin D MHIR_DE00309 dsbB; Disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] C 04131 Membrane trafficking [BR:den04131] D MHIR_DE00407 gapA_1; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MHIR_DE00560 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MHIR_DE00337 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:den03032] D MHIR_DE00043 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MHIR_DE00108 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D MHIR_DE00612 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MHIR_DE00347 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MHIR_DE00625 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MHIR_DE00348 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MHIR_DE00703 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MHIR_DE00611 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MHIR_DE00061 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MHIR_DE00454 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MHIR_DE00042 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MHIR_DE00227 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MHIR_DE00659 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MHIR_DE00417 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MHIR_DE00610 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MHIR_DE00145 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MHIR_DE00539 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MHIR_DE00512 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:den03036] D MHIR_DE00004 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MHIR_DE00436 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D MHIR_DE00108 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D MHIR_DE00612 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MHIR_DE00545 hspQ; Heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D MHIR_DE00547 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D MHIR_DE00238 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D MHIR_DE00122 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D MHIR_DE00123 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MHIR_DE00685 zapD; Cell division protein ZapD K18778 zapD; cell division protein ZapD D MHIR_DE00242 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MHIR_DE00680 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D MHIR_DE00681 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D MHIR_DE00682 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor D MHIR_DE00090 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MHIR_DE00091 mreC; Cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D MHIR_DE00092 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D MHIR_DE00058 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D MHIR_DE00145 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MHIR_DE00539 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MHIR_DE00548 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MHIR_DE00332 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:den03400] D MHIR_DE00147 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D MHIR_DE00655 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MHIR_DE00677 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MHIR_DE00627 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MHIR_DE00197 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MHIR_DE00659 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MHIR_DE00439 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MHIR_DE00378 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MHIR_DE00377 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MHIR_DE00562 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MHIR_DE00189 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MHIR_DE00521 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D MHIR_DE00072 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MHIR_DE00073 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D MHIR_DE00069 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D MHIR_DE00703 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MHIR_DE00611 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MHIR_DE00061 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MHIR_DE00454 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MHIR_DE00042 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MHIR_DE00227 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MHIR_DE00348 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MHIR_DE00464 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D MHIR_DE00463 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D MHIR_DE00707 recD2_2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D MHIR_DE00475 recA; Protein RecA K03553 recA; recombination protein RecA D MHIR_DE00363 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D MHIR_DE00364 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MHIR_DE00362 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MHIR_DE00162 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D MHIR_DE00250 priB; Primosomal replication protein n K02686 priB; primosomal replication protein N D MHIR_DE00417 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MHIR_DE00610 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MHIR_DE00512 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MHIR_DE00108 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D MHIR_DE00547 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D MHIR_DE00436 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D MHIR_DE00448 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D MHIR_DE00418 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MHIR_DE00419 nrdB; Ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:den03029] D MHIR_DE00673 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MHIR_DE00050 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MHIR_DE00692 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D MHIR_DE00386 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D MHIR_DE00641 fusA; Elongation factor G K02355 fusA; elongation factor G D MHIR_DE00005 era; GTPase Era K03595 era; GTPase D MHIR_DE00146 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MHIR_DE00063 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MHIR_DE00501 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MHIR_DE00371 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MHIR_DE00348 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MHIR_DE00697 bamA; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family D MHIR_DE00373 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MHIR_DE00664 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D MHIR_DE00412 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MHIR_DE00411 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D MHIR_DE00372 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D MHIR_DE00174 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MHIR_DE00434 grxD; Glutaredoxin-4 K07390 grxD; monothiol glutaredoxin D MHIR_DE00268 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:den02000] D MHIR_DE00313 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D MHIR_DE00260 yheH; putative multidrug resistance ABC transporter ATP-binding/permease protein YheH K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D MHIR_DE00261 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D MHIR_DE00021 mlaD; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MHIR_DE00020 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MHIR_DE00019 mlaF; putative phospholipid import ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MHIR_DE00022 mlaC; putative phospholipid-binding protein MlaC precursor K07323 mlaC; phospholipid transport system substrate-binding protein D MHIR_DE00023 mlaB; putative phospholipid ABC transporter-binding protein MlaB K07122 mlaB; phospholipid transport system transporter-binding protein D MHIR_DE00554 putative periplasmic iron-binding protein precursor K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D MHIR_DE00555 mntB; Manganese transport system membrane protein MntB K02075 ABC.ZM.P; zinc/manganese transport system permease protein D MHIR_DE00556 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D MHIR_DE00395 lptF; Lipopolysaccharide export system permease protein LptF K07091 lptF; lipopolysaccharide export system permease protein D MHIR_DE00396 lptG; Lipopolysaccharide export system permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein D MHIR_DE00014 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D MHIR_DE00518 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein D MHIR_DE00520 lolC; Lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein D MHIR_DE00519 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D MHIR_DE00424 sufC; putative ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D MHIR_DE00675 mdtK; Multidrug resistance protein MdtK K26939 norM; MATE family, multidrug efflux pump D MHIR_DE00156 galP; Galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D MHIR_DE00722 ptsN; Nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D MHIR_DE00712 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D MHIR_DE00031 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C D MHIR_DE00697 bamA; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family D MHIR_DE00300 bamB; Outer membrane protein assembly factor BamB precursor K17713 bamB; outer membrane protein assembly factor BamB D MHIR_DE00470 bamD; Outer membrane protein assembly factor BamD precursor K05807 bamD; outer membrane protein assembly factor BamD D MHIR_DE00660 bamE; Outer membrane protein assembly factor BamE precursor K06186 bamE; outer membrane protein assembly factor BamE D MHIR_DE00590 tamA; Translocation and assembly module TamA precursor K07278 tamA; translocation and assembly module TamA D MHIR_DE00591 tamB; Translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB D MHIR_DE00015 lptA; Lipopolysaccharide export system protein LptA precursor K09774 lptA; lipopolysaccharide export system protein LptA D MHIR_DE00016 lptC; Lipopolysaccharide export system protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D MHIR_DE00166 lptD; LPS-assembly protein LptD precursor K04744 lptD; LPS-assembly protein D MHIR_DE00062 lptE; LPS-assembly lipoprotein LptE precursor K03643 lptE; LPS-assembly lipoprotein D MHIR_DE00403 pitA; Low-affinity inorganic phosphate transporter 1 K16322 pit; low-affinity inorganic phosphate transporter D MHIR_DE00276 cvrA; K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter D MHIR_DE00445 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein D MHIR_DE00204 murJ; putative peptidoglycan biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase C 02044 Secretion system [BR:den02044] D MHIR_DE00613 YGGT family protein K02221 yggT; YggT family protein D MHIR_DE00127 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MHIR_DE00415 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D MHIR_DE00159 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D MHIR_DE00384 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MHIR_DE00160 secF; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D MHIR_DE00469 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MHIR_DE00568 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MHIR_DE00025 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MHIR_DE00506 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MHIR_DE00158 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MHIR_DE00268 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins C 02022 Two-component system [BR:den02022] D MHIR_DE00099 phoQ; Virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D MHIR_DE00098 phoP_1; Virulence transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D MHIR_DE00336 phoP_2; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07662 cpxR; two-component system, OmpR family, response regulator CpxR C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:den04812] D MHIR_DE00090 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MHIR_DE00123 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MHIR_DE00122 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D MHIR_DE00680 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D MHIR_DE00681 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D MHIR_DE00682 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:den04147] D MHIR_DE00154 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MHIR_DE00407 gapA_1; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MHIR_DE00544 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MHIR_DE00337 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D MHIR_DE00271 tsaA; putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D MHIR_DE00412 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MHIR_DE00373 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MHIR_DE00549 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MHIR_DE00386 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D MHIR_DE00256 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MHIR_DE00596 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MHIR_DE00224 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MHIR_DE00012 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MHIR_DE00310 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MHIR_DE00560 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:den02048] D MHIR_DE00123 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MHIR_DE00090 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MHIR_DE00145 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MHIR_DE00539 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MHIR_DE00284 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MHIR_DE00174 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:den01504] D MHIR_DE00099 phoQ; Virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D MHIR_DE00098 phoP_1; Virulence transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:den03100] D MHIR_DE00285 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MHIR_DE00294 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MHIR_DE00356 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00191 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00306 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00616 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MHIR_DE00055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MHIR_DE00441 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MHIR_DE00429 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MHIR_DE00399 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MHIR_DE00444 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MHIR_DE00388 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MHIR_DE00456 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MHIR_DE00307 tRNA-His K14226 tRNA-His; tRNA His D MHIR_DE00409 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MHIR_DE00280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00343 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D MHIR_DE00400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00430 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00468 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MHIR_DE00282 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MHIR_DE00711 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MHIR_DE00487 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00281 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00398 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00467 tRNA-Met K14230 tRNA-Met; tRNA Met D MHIR_DE00653 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MHIR_DE00221 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MHIR_DE00255 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MHIR_DE00308 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MHIR_DE00030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00192 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00369 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00609 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MHIR_DE00387 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MHIR_DE00390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MHIR_DE00594 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MHIR_DE00410 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MHIR_DE00389 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MHIR_DE00283 tRNA-Val K14237 tRNA-Val; tRNA Val D MHIR_DE00149 tRNA-Val K14237 tRNA-Val; tRNA Val D MHIR_DE00408 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MHIR_DE00443 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MHIR_DE00442 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MHIR_DE00254 Bacteria_small_SRP K01983 ffs; SRP RNA D MHIR_DE00526 RNaseP_bact_a K01978 rnpB; M1 RNA D MHIR_DE00110 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D MHIR_DE00367 fpr; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D MHIR_DE00438 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D MHIR_DE00432 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D MHIR_DE00453 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D MHIR_DE00178 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D MHIR_DE00198 fldA; Flavodoxin-1 K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D MHIR_DE00350 yciS; Inner membrane protein YciS K08992 lapA; lipopolysaccharide assembly protein A D MHIR_DE00349 tetratricopeptide repeat protein K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D MHIR_DE00474 cspC; Cold shock-like protein CspC K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D MHIR_DE00109 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D MHIR_DE00057 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA C 99976 Replication and repair C 99979 Viral proteins C 99998 Others D MHIR_DE00228 ybaB; Nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth D MHIR_DE00559 yciB; Intracellular septation protein K06190 ispZ; intracellular septation protein D MHIR_DE00402 envC; Murein hydrolase activator EnvC precursor K22719 envC; murein hydrolase activator C 99993 Cell motility D MHIR_DE00257 lpoB; Penicillin-binding protein activator LpoB precursor K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D MHIR_DE00131 proQ; ProP effector K03607 proQ; ProP effector D MHIR_DE00094 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein C 99992 Structural proteins D MHIR_DE00466 lolA; Outer-membrane lipoprotein carrier protein precursor K03634 lolA; outer membrane lipoprotein carrier protein D MHIR_DE00301 lolB; Outer-membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB D MHIR_DE00639 mlaA; putative phospholipid-binding lipoprotein MlaA precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA D MHIR_DE00223 slyB; Outer membrane lipoprotein SlyB precursor K06077 slyB; outer membrane lipoprotein SlyB D MHIR_DE00698 skp; Chaperone protein Skp precursor K06142 hlpA; outer membrane protein D MHIR_DE00141 nlpD; Murein hydrolase activator NlpD precursor K06194 nlpD; lipoprotein NlpD D MHIR_DE00298 rodZ; Cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D MHIR_DE00128 erpA; Iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D MHIR_DE00422 iscA; Iron-binding protein IscA K05997 sufA; Fe-S cluster assembly protein SufA D MHIR_DE00423 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D MHIR_DE00425 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D MHIR_DE00044 ydjM; Inner membrane protein YdjM K07038 K07038; inner membrane protein D MHIR_DE00427 sufE; Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D MHIR_DE00096 hflD; High frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein C 99997 Function unknown D MHIR_DE00514 hypothetical protein K09158 K09158; uncharacterized protein D MHIR_DE00482 hypothetical protein K09791 K09791; uncharacterized protein D MHIR_DE00686 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D MHIR_DE00205 hypothetical protein K09897 K09897; uncharacterized protein D MHIR_DE00479 hypothetical protein K09898 K09898; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 18, 2024