+D GENES KO #

  KEGG Orthology (KO) - Desulfuromonas soudanensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:des00010] D DSOUD_2055 putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family K25026 glk; glucokinase [EC:2.7.1.2] D DSOUD_1708 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_2054 pfk-1; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D DSOUD_1467 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DSOUD_2976 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DSOUD_1775 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DSOUD_2977 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_1777 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_1776 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DSOUD_0492 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DSOUD_1744 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DSOUD_1649 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DSOUD_3571 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DSOUD_3011 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D DSOUD_1728 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DSOUD_2781 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2892 bkdA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2893 bkdB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2780 pdhB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2779 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_2894 bkdF; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_0375 por-2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_0297 por-1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_1747 vorA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1470 korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1748 vorB; pyruvate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1469 korB; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1075 alcohol dehydrogenase, class IV K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DSOUD_0487 aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D DSOUD_0091 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_1371 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:des00020] D DSOUD_1023 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D DSOUD_2757 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DSOUD_0751 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DSOUD_1494 acnB; aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DSOUD_1473 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DSOUD_3142 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DSOUD_3141 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_1747 vorA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1470 korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1748 vorB; pyruvate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1469 korB; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1749 vorC; pyruvate:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D DSOUD_1468 korC; 2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D DSOUD_1746 vorD; putative ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D DSOUD_1471 korD; tungsten formylmethanofuran dehydrogenase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D DSOUD_3446 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DSOUD_3447 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DSOUD_1643 frdA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DSOUD_1644 frdB; succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DSOUD_1642 frdC; succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DSOUD_2216 fumB; fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DSOUD_0283 aspA; fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DSOUD_1251 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DSOUD_0091 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_1371 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_2781 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2892 bkdA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2893 bkdB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2780 pdhB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2779 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_2894 bkdF; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_0375 por-2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_0297 por-1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:des00030] D DSOUD_1708 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DSOUD_3434 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DSOUD_0343 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_0656 tklA; transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_0657 tklB; transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_3448 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DSOUD_2029 rpiB; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DSOUD_1118 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D DSOUD_1119 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D DSOUD_2678 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DSOUD_0487 aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D DSOUD_1076 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D DSOUD_2976 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DSOUD_1467 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_2054 pfk-1; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:des00040] D DSOUD_2283 ugd; nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DSOUD_3434 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DSOUD_0054 threonine dehydrogenase/Zn-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D DSOUD_0055 threonine dehydrogenase / Zn-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D DSOUD_2065 delta-1-pyrroline-5-carboxylate dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:des00051] D DSOUD_2249 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DSOUD_2248 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D DSOUD_3100 NDP-sugar pyrophosphorylase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D DSOUD_2254 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DSOUD_2253 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_2054 pfk-1; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D DSOUD_1467 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DSOUD_0054 threonine dehydrogenase/Zn-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D DSOUD_0055 threonine dehydrogenase / Zn-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D DSOUD_2976 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DSOUD_1775 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DSOUD_2029 rpiB; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DSOUD_1306 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DSOUD_1308 phosphotransferase system sorbose-specific IIC component K02795 manY; mannose PTS system EIIC component D DSOUD_1309 phosphotransferase system IID component, Man family K02796 manZ; mannose PTS system EIID component D DSOUD_1307 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] C 00052 Galactose metabolism [PATH:des00052] D DSOUD_3101 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D DSOUD_2247 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DSOUD_2055 putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family K25026 glk; glucokinase [EC:2.7.1.2] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_2054 pfk-1; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:des00053] D DSOUD_2283 ugd; nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DSOUD_2288 uge; UDP-galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:des00500] D DSOUD_0553 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DSOUD_1841 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D DSOUD_3536 glgP; glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D DSOUD_0552 treS; maltokinase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D DSOUD_1010 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D DSOUD_0551 alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D DSOUD_0554 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D DSOUD_0555 treZ; maltooligosyl trehalose hydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D DSOUD_1727 trehalose 6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D DSOUD_0786 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D DSOUD_0787 kojibiose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D DSOUD_2055 putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family K25026 glk; glucokinase [EC:2.7.1.2] D DSOUD_1708 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:des00520] D DSOUD_0047 glmS; glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DSOUD_2796 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D DSOUD_0048 glmU; N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DSOUD_3197 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DSOUD_2922 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DSOUD_1685 capL; nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D DSOUD_0677 uxs; UDP-glucuronate decarboxylase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D DSOUD_2055 putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family K25026 glk; glucokinase [EC:2.7.1.2] D DSOUD_2283 ugd; nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DSOUD_3101 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D DSOUD_2247 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DSOUD_2288 uge; UDP-galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D DSOUD_1306 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DSOUD_1308 phosphotransferase system sorbose-specific IIC component K02795 manY; mannose PTS system EIIC component D DSOUD_1309 phosphotransferase system IID component, Man family K02796 manZ; mannose PTS system EIID component D DSOUD_1708 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DSOUD_2248 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D DSOUD_3100 NDP-sugar pyrophosphorylase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D DSOUD_2249 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DSOUD_2254 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DSOUD_2104 dTDP-4-amino-4,6-dideoxygalactose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102] D DSOUD_2253 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:des00620] D DSOUD_0375 por-2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_0297 por-1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_1747 vorA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1470 korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1748 vorB; pyruvate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1469 korB; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_2781 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2892 bkdA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2893 bkdB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2780 pdhB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2779 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_2894 bkdF; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_1075 alcohol dehydrogenase, class IV K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DSOUD_2449 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_0373 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_1407 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_2451 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_1176 cobyrinic acid a,c-diamide synthase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_3571 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DSOUD_1638 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DSOUD_2139 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DSOUD_2138 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DSOUD_2810 accD; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DSOUD_2936 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D DSOUD_2431 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D DSOUD_3149 glyoxylase/beta-lactamase superfamily II-like metal-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DSOUD_1207 ycbL; glyoxylase/beta-lactamase superfamily II-like metal-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DSOUD_2005 glyoxylase/beta-lactamase superfamily II-like metal-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DSOUD_0135 nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1] D DSOUD_3351 nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1] D DSOUD_2061 maeB; allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DSOUD_0389 Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D DSOUD_1251 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DSOUD_2216 fumB; fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DSOUD_0283 aspA; fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DSOUD_3509 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DSOUD_0091 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_1371 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_3011 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D DSOUD_1728 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_2788 cimA; 2-isopropylmalate synthase/homocitrate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DSOUD_1345 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DSOUD_2514 nifV; homocitrate synthase NifV K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:des00630] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DSOUD_1023 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D DSOUD_2757 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DSOUD_0751 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DSOUD_1494 acnB; aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0026 mceE; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DSOUD_0023 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DSOUD_0407 glcD-2; FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D DSOUD_3352 glcD-1; FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D DSOUD_3353 glcF-1; Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D DSOUD_0406 glcF-2; Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D DSOUD_0196 ghr; 3-hydroxyisobutyrate dehydrogenase/beta-hydroxyacid dehydrogenase K18121 GLYR; glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-] D DSOUD_0819 hprA; lactate dehydrogenase/2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D DSOUD_1390 putative haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DSOUD_0722 putative haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DSOUD_2063 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DSOUD_2028 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DSOUD_2454 gcvP2; glycine dehydrogenase, N-terminal domain K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DSOUD_2453 gcvP1; glycine dehydrogenase, C-terminal domain K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DSOUD_2456 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_2455 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D DSOUD_1089 fdnG; periplasmically oriented, membrane-bound formate dehydrogenase, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_1091 molybdopterin oxidoreductase Fe4S4 domain/TAT (twin-arginine translocation) pathway signal sequence K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_0549 formate dehydrogenase (quinone-dependent) catalytic subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_0550 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_1088 fdnH; periplasmically oriented, membrane-bound formate dehydrogenase, iron-sulfur cluster-binding subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DSOUD_0548 formate dehydrogenase (quinone-dependent) iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DSOUD_0547 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:des00640] D DSOUD_2449 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_0373 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_1407 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_2451 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_1176 cobyrinic acid a,c-diamide synthase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_0311 acyl-CoA dehydrogenase/alkylation response protein AidB K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DSOUD_3270 putative quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_1638 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DSOUD_2139 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DSOUD_2138 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DSOUD_2810 accD; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DSOUD_0026 mceE; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DSOUD_0023 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DSOUD_3447 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DSOUD_3446 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DSOUD_1494 acnB; aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:des00650] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0308 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DSOUD_2008 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_0309 enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D DSOUD_0311 acyl-CoA dehydrogenase/alkylation response protein AidB K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DSOUD_0389 Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D DSOUD_0312 acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D DSOUD_0313 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D DSOUD_1643 frdA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DSOUD_1644 frdB; succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DSOUD_1642 frdC; succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DSOUD_1591 putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D DSOUD_1083 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DSOUD_0196 ghr; 3-hydroxyisobutyrate dehydrogenase/beta-hydroxyacid dehydrogenase K18121 GLYR; glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-] D DSOUD_0375 por-2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_0297 por-1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_1747 vorA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1470 korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1748 vorB; pyruvate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1469 korB; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_0414 3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D DSOUD_0413 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D DSOUD_0105 threonine dehydrogenase/Zn-dependent dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D DSOUD_2497 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1340 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1341 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:des00660] D DSOUD_2497 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1340 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1341 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DSOUD_3447 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DSOUD_3446 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DSOUD_1346 leuC; homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DSOUD_1347 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DSOUD_1350 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:des00562] D DSOUD_1465 hisN; histidinol phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DSOUD_1775 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:des00190] D DSOUD_0254 nuoA-1; NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D DSOUD_3404 nuoA-2; NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D DSOUD_0255 nuoB-1; NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D DSOUD_0256 nuoC; NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D DSOUD_0257 nuoD; NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D DSOUD_3405 nuoB-2; NADH dehydrogenase subunit B K13380 nuoBCD; NADH-quinone oxidoreductase subunit B/C/D [EC:7.1.1.2] D DSOUD_0258 nuoE-1; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D DSOUD_3406 nuoE-2; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D DSOUD_0259 nuoF-1; NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D DSOUD_3407 nuoF-2; NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D DSOUD_0260 nuoG-1; NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D DSOUD_3408 nuoG-2; NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D DSOUD_0262 nuoH-1; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D DSOUD_3409 nuoH-2; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D DSOUD_0263 nuoI-1; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D DSOUD_3410 nuoI-2; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D DSOUD_0264 nuoJ-1; NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D DSOUD_3411 nuoJ-2; NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D DSOUD_0265 nuoK-1; NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D DSOUD_3412 nuoK-2; NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D DSOUD_0266 nuoL-1; NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D DSOUD_3413 nuoL-2; NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D DSOUD_0267 nuoM-1; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D DSOUD_3414 nuoM-2; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D DSOUD_0268 nuoN-1; NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D DSOUD_3415 nuoN-2; NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D DSOUD_1643 frdA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DSOUD_1644 frdB; succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DSOUD_1642 frdC; succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DSOUD_2441 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D DSOUD_0983 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DSOUD_0981 coxD; caa(3)-type cytochrome c oxidase, subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D DSOUD_0980 coxC; heme/copper-type cytochrome/quinol oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D DSOUD_0979 coxA; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D DSOUD_0982 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D DSOUD_2312 cbb3-type cytochrome oxidase, subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D DSOUD_2313 cbb3-type cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D DSOUD_2315 monoheme cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D DSOUD_0336 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DSOUD_0335 cydB; cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DSOUD_3581 atpA; ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DSOUD_3579 atpD; ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DSOUD_3580 atpG; ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DSOUD_3582 atpH; ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DSOUD_3578 atpC; ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DSOUD_0216 atpB; ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DSOUD_3583 atpF; ATP synthase F0 b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DSOUD_3584 atpX; ATP synthase F0 b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DSOUD_0215 atpE; ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DSOUD_0084 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D DSOUD_0083 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D DSOUD_0082 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D DSOUD_0087 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D DSOUD_0089 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D DSOUD_0088 V-type ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D DSOUD_1451 inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:des00710] D DSOUD_1776 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DSOUD_2977 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_1777 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_2976 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DSOUD_1467 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DSOUD_0343 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_0656 tklA; transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_0657 tklB; transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_2029 rpiB; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DSOUD_1775 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DSOUD_3434 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DSOUD_3448 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DSOUD_3509 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DSOUD_0091 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_1371 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DSOUD_3011 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D DSOUD_2061 maeB; allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes [PATH:des00720] D DSOUD_0375 por-2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_0297 por-1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DSOUD_1728 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DSOUD_3011 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D DSOUD_3509 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DSOUD_1251 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DSOUD_2216 fumB; fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DSOUD_0283 aspA; fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DSOUD_1643 frdA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DSOUD_1644 frdB; succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DSOUD_1642 frdC; succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DSOUD_3446 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DSOUD_3447 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_1747 vorA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1470 korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DSOUD_1748 vorB; pyruvate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1469 korB; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DSOUD_1749 vorC; pyruvate:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D DSOUD_1468 korC; 2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D DSOUD_1746 vorD; putative ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D DSOUD_1471 korD; tungsten formylmethanofuran dehydrogenase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D DSOUD_1473 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DSOUD_2757 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DSOUD_0751 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DSOUD_1494 acnB; aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DSOUD_1638 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DSOUD_2139 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DSOUD_2138 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DSOUD_2810 accD; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DSOUD_0026 mceE; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DSOUD_0023 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DSOUD_3426 putative molybdopterin-dependent oxidoreductase K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D DSOUD_3427 NADH-ubiquinone oxidoreductase subunit 3 K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D DSOUD_2459 folD; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DSOUD_2457 metF-1; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D DSOUD_1182 cooS; Ni-dependent carbon monoxide dehydrogenase precursor K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D DSOUD_2451 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_1176 cobyrinic acid a,c-diamide synthase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_2449 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_0373 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_1407 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:des00680] D DSOUD_1089 fdnG; periplasmically oriented, membrane-bound formate dehydrogenase, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_1091 molybdopterin oxidoreductase Fe4S4 domain/TAT (twin-arginine translocation) pathway signal sequence K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_0549 formate dehydrogenase (quinone-dependent) catalytic subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_0550 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DSOUD_1088 fdnH; periplasmically oriented, membrane-bound formate dehydrogenase, iron-sulfur cluster-binding subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DSOUD_0548 formate dehydrogenase (quinone-dependent) iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DSOUD_0547 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D DSOUD_3426 putative molybdopterin-dependent oxidoreductase K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D DSOUD_3427 NADH-ubiquinone oxidoreductase subunit 3 K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D DSOUD_1182 cooS; Ni-dependent carbon monoxide dehydrogenase precursor K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D DSOUD_2028 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DSOUD_0819 hprA; lactate dehydrogenase/2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D DSOUD_1649 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DSOUD_3509 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DSOUD_2976 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DSOUD_1467 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_2054 pfk-1; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D DSOUD_2449 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_0373 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_1407 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_2451 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_1176 cobyrinic acid a,c-diamide synthase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_1728 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DSOUD_0492 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DSOUD_1744 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DSOUD_3398 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_0015 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_2493 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:des00910] D DSOUD_2379 anaerobic selenocysteine-containing dehydrogenase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D DSOUD_0150 cytochrome c respiratory nitrite reductase (ammonia-forming) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D DSOUD_0151 nrfH; putative menaquinol--cytochrome-c respiratory nitrite reductase (NrfH) precursor K15876 nrfH; cytochrome c nitrite reductase small subunit D DSOUD_2561 nifD; Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D DSOUD_2560 nifK; Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D DSOUD_2562 nifH; Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH D DSOUD_1733 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D DSOUD_0489 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D DSOUD_1989 putative periplasmic multiheme cytochrome c K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D DSOUD_3463 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DSOUD_2665 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DSOUD_1587 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_1160 glutamate/leucine/phenylalanine/valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_2898 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DSOUD_0968 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D DSOUD_2063 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DSOUD_3088 ferredoxin-dependent glutamate synthase, GltB2 subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DSOUD_3134 gltS; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DSOUD_1796 cpkA; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D DSOUD_0506 can-1; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:des00920] D DSOUD_3212 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DSOUD_3211 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DSOUD_1763 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D DSOUD_3210 apr; phosphoadenosine phosphosulfate reductase, thioredoxin-dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D DSOUD_1454 nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D DSOUD_0599 anaerobic selenocysteine-containing dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D DSOUD_2211 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DSOUD_3213 cysK-2; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DSOUD_0765 cysK-1; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DSOUD_3222 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D DSOUD_3215 metC-1; cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:des00061] D DSOUD_1638 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DSOUD_2139 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DSOUD_2138 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DSOUD_2810 accD; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DSOUD_2031 acpP-2; acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_1218 acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_1235 acpP-1; acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_1243 acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_2033 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DSOUD_0378 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DSOUD_2450 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_0206 fabH-1; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_2034 fabH-2; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_1244 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_1215 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D DSOUD_2030 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1217 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1228 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1229 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1236 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1237 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_2032 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1214 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1226 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DSOUD_1666 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DSOUD_2240 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DSOUD_0953 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2009 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_0318 long-chain acyl-CoA synthetase [AMP-forming] K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:des00071] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_2215 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2007 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_2008 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DSOUD_0311 acyl-CoA dehydrogenase/alkylation response protein AidB K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DSOUD_0953 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2009 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_0318 long-chain acyl-CoA synthetase [AMP-forming] K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_3299 acyl-CoA synthetase, AMP-forming K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D DSOUD_1075 alcohol dehydrogenase, class IV K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:des00561] D DSOUD_2995 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D DSOUD_2035 plsX; phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DSOUD_0428 plsY; acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DSOUD_1914 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_0945 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_1219 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_1653 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DSOUD_0737 sphingosine/diacylglycerol kinase-related protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DSOUD_1412 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:des00564] D DSOUD_0007 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D DSOUD_3393 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D DSOUD_0428 plsY; acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DSOUD_1914 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_0945 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_1219 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_1653 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DSOUD_0737 sphingosine/diacylglycerol kinase-related protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DSOUD_0424 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D DSOUD_3240 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D DSOUD_2699 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D DSOUD_2203 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D DSOUD_3299 acyl-CoA synthetase, AMP-forming K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D DSOUD_1334 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D DSOUD_1004 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DSOUD_1343 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DSOUD_1342 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D DSOUD_1788 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D DSOUD_0936 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D DSOUD_0107 cls-2; phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D DSOUD_0363 cls-1; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D DSOUD_1714 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism [PATH:des00565] D DSOUD_3240 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D DSOUD_0424 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D DSOUD_3240 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D DSOUD_3240 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:des00592] D DSOUD_3240 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D DSOUD_2215 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2007 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:des01040] D DSOUD_3291 lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D DSOUD_1815 (3S)-malyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:des00230] D DSOUD_2887 NUDIX-type nucleoside diphosphatase, YffH/AdpP family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DSOUD_0738 nudF; ADP-ribose pyrophosphatase NudF, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DSOUD_1119 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D DSOUD_2678 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DSOUD_1782 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DSOUD_2962 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D DSOUD_1698 purN; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DSOUD_1781 purQ; phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DSOUD_1780 purSL; phosphoribosylformylglycinamidine synthase subunit II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D DSOUD_1699 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D DSOUD_2961 purE; phosphoribosylaminoimidazole carboxylase PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D DSOUD_1102 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D DSOUD_2584 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DSOUD_2963 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DSOUD_1950 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DSOUD_1956 surE; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DSOUD_1201 inosine/guanosine/xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D DSOUD_0779 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D DSOUD_3114 YfiH family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DSOUD_2445 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D DSOUD_1631 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DSOUD_1194 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DSOUD_1190 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D DSOUD_1614 carbon monoxide dehydrogenase, FAD-binding subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D DSOUD_1616 carbon monoxide dehydrogenase, small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D DSOUD_1632 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DSOUD_2192 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D DSOUD_1691 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D DSOUD_1564 nrdJ; ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DSOUD_0643 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D DSOUD_1945 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1] D DSOUD_1123 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1] D DSOUD_1693 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DSOUD_2045 phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DSOUD_1897 gppA; Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D DSOUD_3502 (p)ppGpp synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D DSOUD_2508 hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D DSOUD_1477 adenylate cyclase, class 3 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D DSOUD_3400 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DSOUD_2730 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D DSOUD_2828 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DSOUD_2038 mazG; MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DSOUD_1167 calcineurin-like phosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D DSOUD_2059 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D DSOUD_3212 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DSOUD_3211 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DSOUD_1796 cpkA; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:des00240] D DSOUD_1882 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DSOUD_1881 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DSOUD_1879 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DSOUD_1880 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D DSOUD_1702 pyrD; dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D DSOUD_1701 pyrK; dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D DSOUD_1621 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D DSOUD_1783 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D DSOUD_2871 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D DSOUD_1330 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D DSOUD_1194 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DSOUD_2038 mazG; MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DSOUD_0725 maf; MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D DSOUD_0241 putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D DSOUD_1294 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D DSOUD_1383 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D DSOUD_1956 surE; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DSOUD_0779 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D DSOUD_0970 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D DSOUD_1878 pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DSOUD_2730 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D DSOUD_0643 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D DSOUD_1564 nrdJ; ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DSOUD_2027 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D DSOUD_1939 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D DSOUD_1768 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DSOUD_3200 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D DSOUD_3422 NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:des00250] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_1786 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D DSOUD_0341 aspartate/methionine/tyrosine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DSOUD_0741 ald; L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DSOUD_0921 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DSOUD_0918 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DSOUD_3400 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DSOUD_2584 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DSOUD_1879 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DSOUD_1591 putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D DSOUD_1083 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DSOUD_3088 ferredoxin-dependent glutamate synthase, GltB2 subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DSOUD_3134 gltS; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DSOUD_1587 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_1160 glutamate/leucine/phenylalanine/valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_2898 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DSOUD_0968 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D DSOUD_2063 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DSOUD_1882 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DSOUD_1881 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DSOUD_1781 purQ; phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DSOUD_0047 glmS; glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DSOUD_1782 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:des00260] D DSOUD_2789 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DSOUD_1351 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_0788 asd; aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_2019 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DSOUD_2062 thrC; L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DSOUD_2028 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DSOUD_0819 hprA; lactate dehydrogenase/2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D DSOUD_0492 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DSOUD_1744 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DSOUD_3398 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_0015 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_2493 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D DSOUD_3422 NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D DSOUD_2454 gcvP2; glycine dehydrogenase, N-terminal domain K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DSOUD_2453 gcvP1; glycine dehydrogenase, C-terminal domain K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DSOUD_2456 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_2455 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D DSOUD_1004 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DSOUD_1343 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DSOUD_3566 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DSOUD_2214 threonine ammonia-lyase, biosynthetic, long form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DSOUD_2812 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DSOUD_2815 trpB1; tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DSOUD_2817 trpB2; tryptophan synthase, beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:des00270] D DSOUD_2211 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DSOUD_3213 cysK-2; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DSOUD_0765 cysK-1; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DSOUD_3220 metC-2; cystathionine beta-lyase/cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DSOUD_0654 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DSOUD_3430 metF-2; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D DSOUD_1312 metK-1; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DSOUD_2974 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D DSOUD_0711 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D DSOUD_0200 N-acyl-L-homoserine lactone synthetase K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184] D DSOUD_1196 mtaP; methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D DSOUD_3114 YfiH family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DSOUD_0585 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D DSOUD_0056 hypothetical protein K01767 cupin; S-methyl-1-thioxylulose 5-phosphate methylthiotransferase [EC:2.8.4.6] D DSOUD_2640 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_1563 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_0532 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_1324 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DSOUD_2789 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DSOUD_1351 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_0788 asd; aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_2019 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DSOUD_3222 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D DSOUD_3215 metC-1; cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D DSOUD_2014 metY; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D DSOUD_3094 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_1057 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_0342 gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D DSOUD_2443 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_1472 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DSOUD_3398 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_0015 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:des00280] D DSOUD_3094 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_1057 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_0311 acyl-CoA dehydrogenase/alkylation response protein AidB K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_2215 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2007 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_0026 mceE; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DSOUD_0023 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DSOUD_0414 3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:des00290] D DSOUD_3566 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DSOUD_2214 threonine ammonia-lyase, biosynthetic, long form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DSOUD_1346 leuC; homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DSOUD_1347 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DSOUD_1350 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D DSOUD_2497 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1340 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1341 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DSOUD_2220 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DSOUD_1339 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DSOUD_3094 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_1057 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_0341 aspartate/methionine/tyrosine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DSOUD_2788 cimA; 2-isopropylmalate synthase/homocitrate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DSOUD_1345 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:des00300] D DSOUD_2019 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DSOUD_2789 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DSOUD_1351 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_0788 asd; aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_0916 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DSOUD_0915 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DSOUD_0924 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DSOUD_3151 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DSOUD_0914 dapL; L,L-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DSOUD_0772 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DSOUD_2929 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DSOUD_2928 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:des00310] D DSOUD_3141 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_1083 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DSOUD_0905 L-2-hydroxyglutarate oxidase LhgO K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D DSOUD_2698 yjeK; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D DSOUD_2506 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D DSOUD_0973 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:des00220] D DSOUD_0923 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D DSOUD_0921 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DSOUD_0918 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DSOUD_1781 purQ; phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DSOUD_2063 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DSOUD_1882 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DSOUD_1881 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DSOUD_1796 cpkA; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D DSOUD_1587 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_1160 glutamate/leucine/phenylalanine/valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_2898 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DSOUD_0968 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_0341 aspartate/methionine/tyrosine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DSOUD_1114 argA; N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D DSOUD_1117 argJ; glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D DSOUD_0925 argB; N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D DSOUD_1357 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D DSOUD_0924 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DSOUD_3540 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:des00330] D DSOUD_1948 creatinine amidohydrolase/Fe(II)-dependent formamide hydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D DSOUD_0710 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D DSOUD_0712 arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D DSOUD_2183 aguB; putative amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D DSOUD_0711 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D DSOUD_2974 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D DSOUD_0713 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D DSOUD_2012 L-proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D DSOUD_0499 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DSOUD_0498 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:des00340] D DSOUD_3196 hisGS; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D DSOUD_3399 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D DSOUD_3190 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D DSOUD_3192 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylidenea mino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D DSOUD_3193 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D DSOUD_3191 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D DSOUD_3194 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D DSOUD_0280 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DSOUD_3195 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D DSOUD_1221 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D DSOUD_3273 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:des00350] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_0280 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DSOUD_1075 alcohol dehydrogenase, class IV K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DSOUD_1083 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:des00360] D DSOUD_1892 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DSOUD_1894 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DSOUD_1220 phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DSOUD_0525 putative thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D DSOUD_1263 putative thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D DSOUD_0308 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_0280 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DSOUD_1030 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:des00380] D DSOUD_3141 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_1030 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:des00400] D DSOUD_2467 aroF; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DSOUD_0964 aroG-1; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DSOUD_0013 aroG-2; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DSOUD_2144 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D DSOUD_2141 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D DSOUD_2163 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D DSOUD_1011 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DSOUD_2145 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DSOUD_1382 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D DSOUD_2146 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D DSOUD_2821 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DSOUD_2820 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DSOUD_2819 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D DSOUD_1171 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D DSOUD_2816 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D DSOUD_2818 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D DSOUD_2812 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DSOUD_2815 trpB1; tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DSOUD_2817 trpB2; tryptophan synthase, beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DSOUD_1785 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D DSOUD_1380 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D DSOUD_1381 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_0280 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:des00410] D DSOUD_1591 putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D DSOUD_1590 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_0311 acyl-CoA dehydrogenase/alkylation response protein AidB K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:des00430] D DSOUD_1591 putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D DSOUD_0741 ald; L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DSOUD_1587 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_1160 glutamate/leucine/phenylalanine/valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DSOUD_2451 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_1176 cobyrinic acid a,c-diamide synthase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DSOUD_2449 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_0373 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DSOUD_1407 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D DSOUD_3387 phosphoribosyl 1,2-cyclic phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:des00450] D DSOUD_3215 metC-1; cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D DSOUD_3220 metC-2; cystathionine beta-lyase/cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DSOUD_0654 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DSOUD_3430 metF-2; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D DSOUD_1580 cysteine desulfurase family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D DSOUD_0161 trxB-1; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DSOUD_3212 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DSOUD_3211 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DSOUD_2905 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D DSOUD_2903 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D DSOUD_1942 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D DSOUD_2028 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:des00470] D DSOUD_2965 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DSOUD_2695 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2696 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2921 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_1781 purQ; phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DSOUD_0651 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D DSOUD_2926 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DSOUD_3151 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DSOUD_0772 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:des00480] D DSOUD_0342 gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D DSOUD_2443 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D DSOUD_3394 pepA; multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DSOUD_3519 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D DSOUD_0561 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DSOUD_1473 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DSOUD_0711 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:des00540] D DSOUD_1667 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DSOUD_2714 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DSOUD_1665 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D DSOUD_2293 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase LpxH K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D DSOUD_1668 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D DSOUD_1672 lpxK; lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D DSOUD_1296 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DSOUD_1295 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DSOUD_1297 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D DSOUD_1293 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DSOUD_1671 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D DSOUD_2016 lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D DSOUD_1238 lipid A 3-O-deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D DSOUD_3157 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] C 00542 O-Antigen repeat unit biosynthesis [PATH:des00542] D DSOUD_2252 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:des00541] D DSOUD_2247 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DSOUD_2283 ugd; nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DSOUD_2288 uge; UDP-galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D DSOUD_1688 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_3541 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_1686 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DSOUD_1689 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DSOUD_1687 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DSOUD_2249 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DSOUD_2248 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D DSOUD_2254 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DSOUD_2253 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D DSOUD_2104 dTDP-4-amino-4,6-dideoxygalactose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102] D DSOUD_0048 glmU; N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DSOUD_1685 capL; nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:des00550] D DSOUD_3197 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DSOUD_2922 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DSOUD_2923 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DSOUD_2926 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DSOUD_2929 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DSOUD_2695 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2696 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2921 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2928 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DSOUD_1333 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DSOUD_0943 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DSOUD_2927 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DSOUD_2924 murG; UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DSOUD_0096 transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D DSOUD_3573 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DSOUD_0466 membrane carboxypeptidase/penicillin-binding protein PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DSOUD_1107 mrdA; peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DSOUD_2930 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:des00552] D DSOUD_0943 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DSOUD_2252 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DSOUD_1412 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:des00543] D DSOUD_2252 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DSOUD_2211 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:des00730] D DSOUD_2969 thiC-1; hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D DSOUD_2968 thiE_thiD; thiamine biosynthesis bifunctional protein ThiED K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D DSOUD_2998 thiF; thiazole biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D DSOUD_2209 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DSOUD_3001 thiH; tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D DSOUD_2394 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DSOUD_3000 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D DSOUD_2545 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D DSOUD_2544 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D DSOUD_3002 tenI; thiamine-phosphate diphosphorylase/thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D DSOUD_3557 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D DSOUD_0226 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D DSOUD_2828 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:des00740] D DSOUD_2023 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DSOUD_2025 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DSOUD_2022 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D DSOUD_2024 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D DSOUD_2164 ribF; FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D DSOUD_2545 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D DSOUD_2887 NUDIX-type nucleoside diphosphatase, YffH/AdpP family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DSOUD_0738 nudF; ADP-ribose pyrophosphatase NudF, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DSOUD_0277 polyprenyl P-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:des00750] D DSOUD_0368 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D DSOUD_2795 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D DSOUD_2062 thrC; L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:des00760] D DSOUD_1786 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D DSOUD_3174 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D DSOUD_2390 nadC; nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D DSOUD_2889 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D DSOUD_1272 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D DSOUD_1201 inosine/guanosine/xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D DSOUD_1552 hypothetical protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D DSOUD_1956 surE; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DSOUD_0497 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D DSOUD_2038 mazG; MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DSOUD_0739 nudC; NADH pyrophosphatase NudC, NUDIX superfamily K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D DSOUD_2888 nadE; NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D DSOUD_2938 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D DSOUD_2890 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D DSOUD_1281 isochorismatase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D DSOUD_1112 ppnK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D DSOUD_1083 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:des00770] D DSOUD_2497 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1340 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DSOUD_1341 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DSOUD_2220 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DSOUD_1339 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DSOUD_1589 panB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D DSOUD_0187 panE; ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DSOUD_1590 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DSOUD_2388 coaX; pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D DSOUD_1208 coaBC; phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D DSOUD_2038 mazG; MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DSOUD_1947 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D DSOUD_0954 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D DSOUD_2794 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D DSOUD_2642 phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D DSOUD_2687 acpH; acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D DSOUD_3094 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_1057 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:des00780] D DSOUD_1425 bioC; ubiquinone/menaquinone biosynthesis C-methylase UbiE K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D DSOUD_1215 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D DSOUD_2030 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1217 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1228 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1229 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1236 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1237 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_2032 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1214 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1226 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DSOUD_1666 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DSOUD_2240 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DSOUD_1424 bioH; pimeloyl-ACP methyl ester carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D DSOUD_1422 6-carboxyhexanoate-CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14] D DSOUD_1909 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D DSOUD_1908 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D DSOUD_1907 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D DSOUD_2389 birA; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:des00785] D DSOUD_3137 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D DSOUD_2137 lplA; lipoate-protein ligase A K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D DSOUD_3138 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_2781 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2892 bkdA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DSOUD_2893 bkdB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2780 pdhB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DSOUD_2779 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_2894 bkdF; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DSOUD_3142 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DSOUD_3141 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DSOUD_2454 gcvP2; glycine dehydrogenase, N-terminal domain K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DSOUD_2453 gcvP1; glycine dehydrogenase, C-terminal domain K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DSOUD_2456 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DSOUD_2455 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:des00790] D DSOUD_3569 folE; GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D DSOUD_3450 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D DSOUD_2799 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D DSOUD_2809 folC; folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D DSOUD_2023 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DSOUD_1058 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D DSOUD_1839 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DSOUD_1840 queE; radical SAM protein/7-cyano-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D DSOUD_3570 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D DSOUD_0795 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D DSOUD_3276 metal-dependent hydrolase, beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D DSOUD_0715 metal-dependent hydrolase, beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D DSOUD_3356 moaA; cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DSOUD_3349 moaC; cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DSOUD_1069 moeA; molybdopterin--molybdenum ligase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DSOUD_0593 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DSOUD_0230 CTP:molybdopterin cytidylyltransferase MocA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D DSOUD_0596 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] D DSOUD_1063 molybdopterin-guanine dinucleotide biosynthesis protein MobB K13818 mobAB; molybdopterin-guanine dinucleotide biosynthesis protein [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:des00670] D DSOUD_2459 folD; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DSOUD_2028 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DSOUD_1698 purN; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DSOUD_2963 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DSOUD_3438 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DSOUD_2456 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DSOUD_0654 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DSOUD_3430 metF-2; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D DSOUD_3200 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D DSOUD_2457 metF-1; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D DSOUD_2732 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:des00860] D DSOUD_1804 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DSOUD_3160 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D DSOUD_0247 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DSOUD_3163 hemB; delta-aminolevulinic acid dehydratase/porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DSOUD_3161 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D DSOUD_2663 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D DSOUD_2657 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D DSOUD_2662 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D DSOUD_3162 hemD; uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D DSOUD_3158 cysG; precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D DSOUD_0619 sirohydrochlorin cobaltochelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4] D DSOUD_2664 radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D DSOUD_0983 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DSOUD_0627 cbiL; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D DSOUD_0628 cbiF; cobalt-precorrin 4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D DSOUD_2051 Precorrin-4 methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D DSOUD_0629 cbiG; cobalt-precorrin 5A acetaldehyde-lyase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D DSOUD_0625 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D DSOUD_0626 cbiET; precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D DSOUD_0620 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D DSOUD_0617 cbiA; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D DSOUD_0612 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DSOUD_3461 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DSOUD_0630 cbiH_cbiP; adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D DSOUD_0631 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D DSOUD_0613 cobU; adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D DSOUD_0615 cobS; cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D DSOUD_0618 thiC-2; phosphomethylpyrimidine synthase ThiC K22466 bzaF; 5-hydroxybenzimidazole synthase [EC:4.1.99.23] D DSOUD_0614 cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D DSOUD_0616 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D DSOUD_0633 cobD; L-threonine O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:des00130] D DSOUD_0276 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D DSOUD_0197 3-polyprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D DSOUD_0269 ubiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D DSOUD_0277 polyprenyl P-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DSOUD_2740 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D DSOUD_2134 mqnA; putative periplasmic solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D DSOUD_0278 mqnC-2; putative menaquinone biosynthesis radical SAM enzyme K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D DSOUD_1592 cytosine/adenosine deaminase/metal-dependent hydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D DSOUD_0020 mqnB; futalosine hydrolase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D DSOUD_0279 mqnC-1; dehypoxanthine futalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D DSOUD_0019 mqnD; 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] D DSOUD_1170 wrbA; NAD(P)H-quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:des00900] D DSOUD_2394 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DSOUD_1335 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D DSOUD_0189 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D DSOUD_2680 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D DSOUD_0190 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D DSOUD_2874 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D DSOUD_1384 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_3298 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D DSOUD_0277 polyprenyl P-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DSOUD_2395 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DSOUD_2310 ispB; geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DSOUD_1333 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DSOUD_3055 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:des00907] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_2215 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2007 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D DSOUD_0343 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_0656 tklA; transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DSOUD_0657 tklB; transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:des00523] D DSOUD_1688 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_3541 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_1686 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DSOUD_1689 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DSOUD_1687 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D DSOUD_1686 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:des00332] D DSOUD_0499 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DSOUD_0498 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:des00261] D DSOUD_3212 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DSOUD_3211 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DSOUD_2789 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DSOUD_1351 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_0788 asd; aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DSOUD_0916 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DSOUD_0915 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:des00521] D DSOUD_2055 putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family K25026 glk; glucokinase [EC:2.7.1.2] D DSOUD_1465 hisN; histidinol phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DSOUD_1688 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_3541 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_1686 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DSOUD_1689 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DSOUD_1687 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D DSOUD_2055 putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:des00525] D DSOUD_1688 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_3541 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DSOUD_1686 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:des00401] D DSOUD_1381 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_0280 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D DSOUD_2821 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DSOUD_2820 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis [PATH:des00333] D DSOUD_2098 L-prolyl-[peptidyl carrier protein] dehydrogenase K21782 pigA; L-prolyl-PCP dehydrogenase [EC:1.3.8.14] D DSOUD_2033 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DSOUD_0378 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DSOUD_2032 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1214 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_2240 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D DSOUD_2031 acpP-2; acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_1218 acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_1235 acpP-1; acyl carrier protein K02078 acpP; acyl carrier protein D DSOUD_1243 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:des00999] D DSOUD_1312 metK-1; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DSOUD_2163 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:des00362] D DSOUD_2215 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2007 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_3121 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D DSOUD_3303 phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_1525 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_1426 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D DSOUD_2008 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DSOUD_0389 Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D DSOUD_0308 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:des00627] D DSOUD_2936 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D DSOUD_0277 polyprenyl P-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:des00625] D DSOUD_1075 alcohol dehydrogenase, class IV K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DSOUD_2560 nifK; Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D DSOUD_2562 nifH; Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH D DSOUD_2561 nifD; Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation D DSOUD_3121 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00623 Toluene degradation C 00622 Xylene degradation [PATH:des00622] D DSOUD_3121 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D DSOUD_3303 phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_1525 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_1426 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:des00633] D DSOUD_0078 hyaL; periplasmically oriented, membrane-bound [NiFe]-hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D DSOUD_3283 hybS; periplasmically oriented, membrane-bound [NiFe]-hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D DSOUD_0077 hyaS; periplasmically oriented, membrane-bound [NiFe]-hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D DSOUD_1182 cooS; Ni-dependent carbon monoxide dehydrogenase precursor K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] C 00642 Ethylbenzene degradation D DSOUD_2215 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DSOUD_2007 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:des00643] D DSOUD_3121 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D DSOUD_0312 acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D DSOUD_0313 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:des00930] D DSOUD_2782 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D DSOUD_3303 phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_1525 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DSOUD_1426 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:des00626] D DSOUD_1075 alcohol dehydrogenase, class IV K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:des03020] D DSOUD_2855 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DSOUD_2854 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DSOUD_2823 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DSOUD_1692 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:des03010] D DSOUD_0221 30S ribosomal protein L1 K02945 RP-S1; small subunit ribosomal protein S1 D DSOUD_1385 rpsA; 30S ribosomal protein L1 K02945 RP-S1; small subunit ribosomal protein S1 D DSOUD_1328 rpsB; 30S ribosomal protein L2 K02967 RP-S2; small subunit ribosomal protein S2 D DSOUD_2842 rpsC; 30S ribosomal protein L3 K02982 RP-S3; small subunit ribosomal protein S3 D DSOUD_2824 rpsD; 30S ribosomal protein L4 K02986 RP-S4; small subunit ribosomal protein S4 D DSOUD_2832 rpsE; 30S ribosomal protein L5 K02988 RP-S5; small subunit ribosomal protein S5 D DSOUD_2673 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DSOUD_2852 rpsG; 30S ribosomal protein L7 K02992 RP-S7; small subunit ribosomal protein S7 D DSOUD_2835 rpsH; 30S ribosomal protein L8 K02994 RP-S8; small subunit ribosomal protein S8 D DSOUD_1356 rpsI; 30S ribosomal protein L9 K02996 RP-S9; small subunit ribosomal protein S9 D DSOUD_2849 rpsJ; 30S ribosomal protein L10 K02946 RP-S10; small subunit ribosomal protein S10 D DSOUD_2825 rpsK; 30S ribosomal protein L11 K02948 RP-S11; small subunit ribosomal protein S11 D DSOUD_2853 rpsL; 30S ribosomal protein L12 K02950 RP-S12; small subunit ribosomal protein S12 D DSOUD_2826 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DSOUD_1765 rpsO; 30S ribosomal protein L15 K02956 RP-S15; small subunit ribosomal protein S15 D DSOUD_2947 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DSOUD_2839 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DSOUD_2672 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DSOUD_2844 rpsS; 30S ribosomal protein L19 K02965 RP-S19; small subunit ribosomal protein S19 D DSOUD_1917 rpsT; 30S ribosomal protein L20 K02968 RP-S20; small subunit ribosomal protein S20 D DSOUD_2473 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DSOUD_2858 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DSOUD_2845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DSOUD_2848 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DSOUD_2847 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DSOUD_2836 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DSOUD_2834 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DSOUD_2856 rplL; 50S ribosomal protein L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DSOUD_2670 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DSOUD_2857 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DSOUD_2859 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DSOUD_1355 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DSOUD_2838 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DSOUD_2830 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DSOUD_2841 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DSOUD_2822 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DSOUD_2833 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DSOUD_2942 rplS; 30S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DSOUD_1961 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DSOUD_0502 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DSOUD_2843 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DSOUD_2846 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DSOUD_2837 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DSOUD_2677 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D DSOUD_0501 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DSOUD_1695 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DSOUD_2840 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DSOUD_2831 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DSOUD_3201 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DSOUD_2036 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DSOUD_2863 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DSOUD_3592 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DSOUD_1962 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DSOUD_2722 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DSOUD_2728 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DSOUD_2718 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DSOUD_2724 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DSOUD_2717 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DSOUD_2723 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:des00970] D DSOUD_2720 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_3345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_2726 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_1098 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_0290 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_1949 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_2428 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_0124 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_2432 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_3464 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DSOUD_2418 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DSOUD_2420 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DSOUD_1801 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DSOUD_1823 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DSOUD_2679 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DSOUD_1824 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DSOUD_3402 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DSOUD_1837 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_0759 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_1789 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_2866 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_2427 tRNA-His K14226 tRNA-His; tRNA His D DSOUD_2617 tRNA-His K14226 tRNA-His; tRNA His D DSOUD_2721 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DSOUD_2727 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DSOUD_2133 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_2426 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_1050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_1773 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_2011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_3401 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DSOUD_3225 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_3184 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_2802 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_2803 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_0012 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DSOUD_2429 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DSOUD_0473 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DSOUD_1891 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DSOUD_0288 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DSOUD_0292 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DSOUD_0287 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DSOUD_2651 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DSOUD_2865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DSOUD_2868 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DSOUD_2862 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DSOUD_2867 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DSOUD_1965 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_3472 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_2419 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_1983 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_2877 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D DSOUD_1804 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DSOUD_0589 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DSOUD_0588 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DSOUD_0590 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DSOUD_0191 glnS; glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DSOUD_0929 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DSOUD_1475 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DSOUD_3047 asnS; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DSOUD_3013 glyQ; glycyl-tRNA ligase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DSOUD_3012 glyS; glycyl-tRNA ligase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DSOUD_1964 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DSOUD_0286 serS; seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DSOUD_2903 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D DSOUD_0192 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DSOUD_1942 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DSOUD_3438 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DSOUD_1127 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DSOUD_1920 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DSOUD_0484 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DSOUD_1660 lysS; lysyl-tRNA ligase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DSOUD_2805 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DSOUD_2873 proS; prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DSOUD_1476 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DSOUD_1960 pheS; phenylalanyl-tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DSOUD_1959 pheT; phenylalanyl-tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DSOUD_2729 tyrS; tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DSOUD_3039 trpS; tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:des03060] D DSOUD_2829 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DSOUD_2861 secE; protein translocase subunit SecE/Sec61 gamma K03073 secE; preprotein translocase subunit SecE D DSOUD_1774 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DSOUD_1365 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D DSOUD_2631 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D DSOUD_1366 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D DSOUD_1364 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DSOUD_3591 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DSOUD_1116 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DSOUD_2948 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DSOUD_0293 bacterial large signal recognition particle RNA K01983 ffs; SRP RNA D DSOUD_2735 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DSOUD_2906 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_2447 tatB-2; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_0592 tatB-1; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_2630 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DSOUD_3172 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DSOUD_1877 signal peptidase I/serine peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D DSOUD_0483 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:des04122] D DSOUD_2209 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DSOUD_2207 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DSOUD_3356 moaA; cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DSOUD_1078 molybdopterin or thiamine biosynthesis adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D DSOUD_2688 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D DSOUD_3349 moaC; cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DSOUD_2999 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D DSOUD_2998 thiF; thiazole biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome D DSOUD_2994 AAA ATPase K03420 psmR; proteasome regulatory subunit C 03018 RNA degradation [PATH:des03018] D DSOUD_2234 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D DSOUD_2814 rhlB; RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D DSOUD_1649 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DSOUD_1766 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DSOUD_2540 rhlE-3; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DSOUD_1085 rhlE-1; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DSOUD_1406 rhlE-2; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DSOUD_2165 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DSOUD_2198 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D DSOUD_0109 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DSOUD_0270 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DSOUD_3202 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D DSOUD_2731 rny; metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D DSOUD_0944 beta-CASP ribonuclease, RNase J family K12574 rnj; ribonuclease J [EC:3.1.-.-] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_0183 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DSOUD_3377 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DSOUD_1713 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D DSOUD_1836 ccaC; tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DSOUD_3456 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:des03030] D DSOUD_3269 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DSOUD_1637 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DSOUD_0294 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DSOUD_1940 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DSOUD_1918 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DSOUD_1750 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DSOUD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DSOUD_2669 dnaB; primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DSOUD_3186 dnaG; DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D DSOUD_0946 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DSOUD_3403 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DSOUD_1415 5'-3' exonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DSOUD_2940 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DSOUD_0577 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DSOUD_3244 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_2935 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:des03410] D DSOUD_0010 endonuclease III-related DNA glycosidase, HhH-GPD superfamily K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DSOUD_0281 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DSOUD_1403 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DSOUD_0220 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D DSOUD_1210 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DSOUD_2813 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DSOUD_3110 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DSOUD_3153 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D DSOUD_0577 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DSOUD_1369 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DSOUD_3244 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_2935 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:des03420] D DSOUD_3175 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DSOUD_0367 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D DSOUD_0193 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DSOUD_3070 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DSOUD_3096 rep; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DSOUD_0045 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DSOUD_0577 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DSOUD_3244 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_2935 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:des03430] D DSOUD_1740 mutS-1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DSOUD_3187 mutS-2; MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D DSOUD_1711 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D DSOUD_3096 rep; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DSOUD_0045 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DSOUD_2398 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DSOUD_2396 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DSOUD_1369 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DSOUD_0946 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DSOUD_1637 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DSOUD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DSOUD_0294 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DSOUD_1918 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DSOUD_1940 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DSOUD_3269 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DSOUD_1750 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DSOUD_3244 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_2935 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_0880 site-specific DNA-adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:des03440] D DSOUD_1369 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DSOUD_0946 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DSOUD_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D DSOUD_3014 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DSOUD_0296 recR; DNA replication and repair protein RecR K06187 recR; recombination protein RecR D DSOUD_0932 recA; recombinase RecA K03553 recA; recombination protein RecA D DSOUD_0577 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DSOUD_2705 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DSOUD_2706 ruvB; Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DSOUD_2704 ruvC; Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DSOUD_1885 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DSOUD_2068 recB; DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D DSOUD_2069 recC; DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D DSOUD_2067 recD; DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DSOUD_1637 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DSOUD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DSOUD_0294 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DSOUD_1918 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DSOUD_1940 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DSOUD_3269 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DSOUD_1750 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DSOUD_0967 priA; replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:des03250] D DSOUD_0008 ppiA; cytosolic peptidylprolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:des02010] D DSOUD_1072 tupA; ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D DSOUD_1071 tupB; ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D DSOUD_1070 carbohydrate ABC transporter ATP-binding protein, CUT1 family K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D DSOUD_2518 modA; molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DSOUD_2517 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D DSOUD_2516 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D DSOUD_1005 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K05776 modF; molybdate transport system ATP-binding protein D DSOUD_1832 ABC-type transporter Mla maintaining outer membrane lipid asymmetry, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DSOUD_1830 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DSOUD_1831 ABC-type transporter Mla maintaining outer membrane lipid asymmetry, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DSOUD_3305 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_3328 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_0069 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_1996 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_0068 ABC transporter permease K02037 pstC; phosphate transport system permease protein D DSOUD_0067 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D DSOUD_0066 pstB; phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DSOUD_0322 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D DSOUD_0320 livH; amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D DSOUD_0321 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D DSOUD_0319 livG; amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D DSOUD_0323 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D DSOUD_2549 ABC-type Zn2+ transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D DSOUD_2552 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D DSOUD_2551 ABC-type Mn2+/Zn2+ transport system, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DSOUD_0622 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D DSOUD_0621 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D DSOUD_0647 nikMN; ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D DSOUD_0623 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D DSOUD_0641 nikQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D DSOUD_0624 cbiO; cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DSOUD_0640 nikO; cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DSOUD_1352 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D DSOUD_0892 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein D DSOUD_0893 ABC-type multidrug transport system, ATPase component K09695 nodI; lipooligosaccharide transport system ATP-binding protein D DSOUD_1661 lolE; lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D DSOUD_3367 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D DSOUD_1662 lolD; ABC-type lipoprotein export system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DSOUD_1327 lptF; lipopolysaccharide export LptBFGC system, permease protein LptF K07091 lptF; lipopolysaccharide export system permease protein D DSOUD_1326 lptG; lipopolysaccharide export LptBFGC system, permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein D DSOUD_1300 lptB; ABC-type lipopolysaccharide export system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D DSOUD_2403 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D DSOUD_2404 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DSOUD_1669 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D DSOUD_2131 N-terminal double-glycine peptidase domain-containing ABC-type bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB C 02060 Phosphotransferase system (PTS) [PATH:des02060] D DSOUD_1311 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DSOUD_1310 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D DSOUD_1306 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DSOUD_1308 phosphotransferase system sorbose-specific IIC component K02795 manY; mannose PTS system EIIC component D DSOUD_1309 phosphotransferase system IID component, Man family K02796 manZ; mannose PTS system EIID component D DSOUD_1307 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D DSOUD_1140 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D DSOUD_1139 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DSOUD_1303 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:des03070] D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2127 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D DSOUD_2131 N-terminal double-glycine peptidase domain-containing ABC-type bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D DSOUD_0575 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D DSOUD_2407 pulQ; type II secretion system secretin lipoprotein PulQ K02453 gspD; general secretion pathway protein D D DSOUD_0576 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D DSOUD_0573 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D DSOUD_1508 hypothetical protein K02456 gspG; general secretion pathway protein G D DSOUD_0673 hypothetical protein K02456 gspG; general secretion pathway protein G D DSOUD_0690 hypothetical protein K02456 gspG; general secretion pathway protein G D DSOUD_0572 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D DSOUD_2405 oxpG; type II secretion system pseudopilin OxpG K02456 gspG; general secretion pathway protein G D DSOUD_2406 pulG; type II secretion system pseudopilin PulG K02456 gspG; general secretion pathway protein G D DSOUD_0570 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D DSOUD_0569 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D DSOUD_0568 gspK; type II secretion system protein GspK K02460 gspK; general secretion pathway protein K D DSOUD_0567 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D DSOUD_0566 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M D DSOUD_0574 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DSOUD_1365 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D DSOUD_2631 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D DSOUD_1366 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D DSOUD_2861 secE; protein translocase subunit SecE/Sec61 gamma K03073 secE; preprotein translocase subunit SecE D DSOUD_1774 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DSOUD_2829 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DSOUD_1364 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DSOUD_3591 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DSOUD_1116 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DSOUD_2735 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DSOUD_2948 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DSOUD_2906 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_2447 tatB-2; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_0592 tatB-1; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_2630 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DSOUD_3172 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DSOUD_3249 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D DSOUD_0044 putative type VI secretion system needle syringe protein TssI K11904 vgrG; type VI secretion system secreted protein VgrG D DSOUD_3254 tssD; type VI secretion system needle tube protein TssD K11903 hcp; type VI secretion system secreted protein Hcp D DSOUD_3262 tssJ; type VI secretion system outer membrane lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D DSOUD_3259 tssM; type VI secretion system ATPase and inner membrane protein TssM K11891 impL; type VI secretion system protein ImpL D DSOUD_3260 tssL; type VI secretion system inner membrane protein TssL K11892 impK; type VI secretion system protein ImpK D DSOUD_3250 tssH; type VI secretion system ATPase TssH chaperone K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:des02020] D DSOUD_3474 phoR; PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2666 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2738 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_3305 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_3328 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_0069 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_1996 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_0131 putative Fis family transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D DSOUD_0146 degQ; periplasmic trypsin-like serine protease lipoprotein DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_0369 degP; periplasmic trypsin-like serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_2611 signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D DSOUD_2612 transcriptional regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D DSOUD_2973 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D DSOUD_1851 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D DSOUD_1852 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D DSOUD_1976 multi-sensor hybrid histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D DSOUD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DSOUD_2608 dcuB; anaerobic C4-dicarboxylate membrane transporter family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D DSOUD_0371 sensor histidine kinase, HAMP domain-containing K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D DSOUD_2226 hypothetical protein K06080 rcsF; RcsF protein D DSOUD_1742 glnD; UTP--GlnB (protein PII) uridylyltransferase GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D DSOUD_2064 glnB; nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D DSOUD_1460 glnK; nitrogen regulatory protein, PII family K04751 glnB; nitrogen regulatory protein P-II 1 D DSOUD_1021 gnfL; signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DSOUD_2116 nitrogen-specific signal transduction histidine kinase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DSOUD_1020 gnfM; two-component sigma54-specific transcriptional regulator, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D DSOUD_2063 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DSOUD_2715 PAS/PAC sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D DSOUD_2716 two component sigma54-specific transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D DSOUD_2193 signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DSOUD_1261 histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DSOUD_2171 two-component sigma54-specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D DSOUD_0063 sigma54 specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D DSOUD_2350 two-component sigma54-specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_0153 DNA-binding transcriptional response regulator, NtrC family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_1566 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_2307 two-component sigma54-specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_0888 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_0148 DNA-binding transcriptional response regulator, NtrC family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_2159 pilS; sensor histidine kinase PilS, PAS domain-containing K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D DSOUD_2158 pilR; sigma-54-dependent transcriptional response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D DSOUD_1301 rpoN; RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D DSOUD_2157 type IV pilus assembly protein K02650 pilA; type IV pilus assembly protein PilA D DSOUD_3283 hybS; periplasmically oriented, membrane-bound [NiFe]-hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D DSOUD_0077 hyaS; periplasmically oriented, membrane-bound [NiFe]-hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D DSOUD_0078 hyaL; periplasmically oriented, membrane-bound [NiFe]-hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D DSOUD_0079 hyaB; periplasmically oriented, membrane-bound [NiFe]-hydrogenase b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D DSOUD_1488 cheR34H; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_3556 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_1925 cheR40H; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_3029 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DSOUD_3329 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1053 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1183 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0419 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0458 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1429 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1486 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_3452 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_3555 mcp44H; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1125 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1052 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_3554 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1928 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1930 cheW40H; chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1428 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1487 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1124 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1485 cheA34H; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_3552 chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1932 cheA40H; chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1933 cheY40H-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1482 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1484 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_3553 cheY44H; putative REC superfamily histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1922 cheY40H-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1430 cheY34H; Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_2348 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_0104 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1489 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1924 cheB40H; protein-glutamate methylesterase domain-containing chemotaxis response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_2581 tripartite ATP-independent periplasmic transporter solute receptor, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP D DSOUD_2583 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D DSOUD_0357 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D DSOUD_2582 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D DSOUD_0396 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D DSOUD_1793 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D DSOUD_1900 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DSOUD_3072 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DSOUD_2441 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D DSOUD_2312 cbb3-type cytochrome oxidase, subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D DSOUD_2313 cbb3-type cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D DSOUD_2315 monoheme cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D DSOUD_0336 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DSOUD_0335 cydB; cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2291 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D DSOUD_2111 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D DSOUD_2290 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DSOUD_3279 signal transduction histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:des02024] D DSOUD_1713 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D DSOUD_0200 N-acyl-L-homoserine lactone synthetase K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184] D DSOUD_2821 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DSOUD_2820 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DSOUD_2467 aroF; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DSOUD_1591 putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D DSOUD_0322 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D DSOUD_0320 livH; amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D DSOUD_0321 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D DSOUD_0319 livG; amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D DSOUD_0323 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D DSOUD_3363 hypothetical protein K20276 bapA; large repetitive protein D DSOUD_0430 hypothetical protein K20276 bapA; large repetitive protein D DSOUD_0953 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2009 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_0318 long-chain acyl-CoA synthetase [AMP-forming] K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_1900 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DSOUD_3072 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DSOUD_2550 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D DSOUD_2025 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DSOUD_0899 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D DSOUD_1398 ABC-type transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DSOUD_1399 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D DSOUD_1401 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DSOUD_1143 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D DSOUD_1142 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DSOUD_3591 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DSOUD_2861 secE; protein translocase subunit SecE/Sec61 gamma K03073 secE; preprotein translocase subunit SecE D DSOUD_1774 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DSOUD_2829 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DSOUD_1364 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DSOUD_1116 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DSOUD_2735 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DSOUD_2948 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:des02030] D DSOUD_3329 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1053 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1183 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0419 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0458 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1429 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1486 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_3452 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_3555 mcp44H; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1485 cheA34H; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_3552 chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1932 cheA40H; chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1125 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1052 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_3554 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1928 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1930 cheW40H; chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1428 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1487 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1124 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1933 cheY40H-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1482 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1484 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_3553 cheY44H; putative REC superfamily histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1922 cheY40H-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1430 cheY34H; Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_2348 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_3551 cheC44H; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D DSOUD_0104 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1489 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1924 cheB40H; protein-glutamate methylesterase domain-containing chemotaxis response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_3029 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DSOUD_1491 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DSOUD_3550 cheD44H; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DSOUD_1488 cheR34H; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_3556 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_1925 cheR40H; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_0825 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_2392 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:des02040] D DSOUD_0825 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_2392 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_3185 rpoD; RNA polymerase sigma-70 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D DSOUD_1301 rpoN; RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D DSOUD_1649 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:des04980] D DSOUD_0024 methylmalonyl-CoA mutase metallochaperone MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D DSOUD_0023 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DSOUD_0654 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:des01501] D DSOUD_2595 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2499 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_0897 acrA; RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2594 Multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_2500 multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_0898 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D DSOUD_0899 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_3573 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DSOUD_1107 mrdA; peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DSOUD_2930 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:des01502] D DSOUD_2695 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2696 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2921 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2965 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DSOUD_2928 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DSOUD_2927 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DSOUD_2924 murG; UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:des01503] D DSOUD_0131 putative Fis family transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D DSOUD_0853 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_1741 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_1188 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_0146 degQ; periplasmic trypsin-like serine protease lipoprotein DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_0369 degP; periplasmic trypsin-like serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_0008 ppiA; cytosolic peptidylprolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D DSOUD_2595 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2499 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_0897 acrA; RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2594 Multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_2500 multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_0898 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_1667 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:des01000] C 01001 Protein kinases [BR:des01001] D DSOUD_0095 serine/threonine-protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D DSOUD_2776 serine/threonine protein kinase with Chase2 sensor K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D DSOUD_2879 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DSOUD_1495 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DSOUD_1391 rsbW; anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DSOUD_2290 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DSOUD_2109 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D DSOUD_3474 phoR; PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2666 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2738 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2611 signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D DSOUD_1976 multi-sensor hybrid histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D DSOUD_0371 sensor histidine kinase, HAMP domain-containing K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D DSOUD_2610 sensor histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D DSOUD_1021 gnfL; signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DSOUD_2116 nitrogen-specific signal transduction histidine kinase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DSOUD_2715 PAS/PAC sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D DSOUD_2193 signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DSOUD_1261 histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DSOUD_2159 pilS; sensor histidine kinase PilS, PAS domain-containing K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D DSOUD_2311 putative signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1459 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1255 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1066 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_3228 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_3074 cache sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_2172 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_0889 signal transduction histidine kinase regulating C4-dicarboxylate transport system K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_0130 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_0152 putative sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1093 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1485 cheA34H; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_3552 chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1932 cheA40H; chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_3279 signal transduction histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:des01009] D DSOUD_1324 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_2528 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DSOUD_2775 serine/threonine protein phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D DSOUD_2493 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:des01002] D DSOUD_0483 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D DSOUD_2153 pilD; type IV prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DSOUD_3282 hybP; periplasmically oriented, membrane-bound [NiFe]-hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D DSOUD_3309 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D DSOUD_0080 hyaP; periplasmically oriented, membrane-bound [NiFe]-hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D DSOUD_1632 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DSOUD_0236 peptidoglycan-binding lipoprotein, SPOR and NlpC-P60 domain-containing K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D DSOUD_1782 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DSOUD_3088 ferredoxin-dependent glutamate synthase, GltB2 subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DSOUD_3134 gltS; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DSOUD_0047 glmS; glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DSOUD_2599 lipoprotein-anchoring transpeptidase ErfK/SrfK K16291 erfK; L,D-transpeptidase ErfK/SrfK D DSOUD_1145 lipoprotein-anchoring transpeptidase ErfK/SrfK K19235 ybiS; L,D-transpeptidase YbiS D DSOUD_0425 murein L,D-transpeptidase YcbB/YkuD K21470 ycbB; L,D-transpeptidase YcbB D DSOUD_2118 abortive infection protein K07052 K07052; CAAX protease family protein D DSOUD_3519 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D DSOUD_0040 pepF; oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D DSOUD_2755 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-] D DSOUD_2299 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D DSOUD_3394 pepA; multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DSOUD_2682 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D DSOUD_2827 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D DSOUD_2140 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D DSOUD_2800 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DSOUD_1647 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DSOUD_3055 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D DSOUD_3436 htpX-2; heat shock protein/metallopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D DSOUD_1374 htpX-1; heat shock protein/metallopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D DSOUD_0125 peptidase M48 K07387 K07387; metalloprotease [EC:3.4.24.-] D DSOUD_1336 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D DSOUD_0102 hypothetical protein K09933 mtfA; MtfA peptidase D DSOUD_0146 degQ; periplasmic trypsin-like serine protease lipoprotein DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_0369 degP; periplasmic trypsin-like serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_2424 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DSOUD_2422 ATP-dependent Lon protease (La)/serine peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DSOUD_3558 lon-4; ATP-dependent Lon protease (La)/serine peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DSOUD_2301 lon-2; ATP-dependent Lon protease/endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DSOUD_0563 lon-1; ATP-dependent PIM1 serine peptidase/ATP-dependent Lon protease (La) K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DSOUD_0037 lexA; SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DSOUD_1877 signal peptidase I/serine peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D DSOUD_3468 ctpA-2; periplasmic carboxy-terminal processing protease lipoprotein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DSOUD_2401 ctpA-1; periplasmic carboxy-terminal processing protease lipoprotein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DSOUD_1386 sppA; signal peptide serine peptidase A K04773 sppA; protease IV [EC:3.4.21.-] D DSOUD_0927 ATP dependent threonine peptidase CodWX, CodW component K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D DSOUD_2050 collagenase-like protease, PrtC family K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DSOUD_3527 Collagenase-like protease, PrtC family K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DSOUD_0733 collagenase-like protease, PrtC family K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DSOUD_0462 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D DSOUD_2481 protease FtsH subunit HflC K04087 hflC; modulator of FtsH protease HflC D DSOUD_2480 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:des01003] D DSOUD_0693 hypothetical protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D DSOUD_0668 Tfp pilus assembly protein PilF K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D DSOUD_1412 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D DSOUD_0096 transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D DSOUD_0466 membrane carboxypeptidase/penicillin-binding protein PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DSOUD_3573 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DSOUD_2252 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DSOUD_0786 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:des01005] D DSOUD_1667 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DSOUD_1668 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D DSOUD_2714 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DSOUD_1665 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D DSOUD_2293 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase LpxH K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D DSOUD_1672 lpxK; lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D DSOUD_2016 lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D DSOUD_1671 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D DSOUD_1238 lipid A 3-O-deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D DSOUD_1295 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DSOUD_1293 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DSOUD_1297 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D DSOUD_1296 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DSOUD_3157 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D DSOUD_2252 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:des01011] D DSOUD_3197 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DSOUD_2922 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DSOUD_2923 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DSOUD_2926 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DSOUD_2929 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DSOUD_2695 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2696 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2921 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DSOUD_2965 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DSOUD_0651 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D DSOUD_2927 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DSOUD_2924 murG; UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DSOUD_0943 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DSOUD_1916 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D DSOUD_3573 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DSOUD_0466 membrane carboxypeptidase/penicillin-binding protein PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DSOUD_1107 mrdA; peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DSOUD_2930 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DSOUD_0096 transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D DSOUD_2599 lipoprotein-anchoring transpeptidase ErfK/SrfK K16291 erfK; L,D-transpeptidase ErfK/SrfK D DSOUD_1145 lipoprotein-anchoring transpeptidase ErfK/SrfK K19235 ybiS; L,D-transpeptidase YbiS D DSOUD_0425 murein L,D-transpeptidase YcbB/YkuD K21470 ycbB; L,D-transpeptidase YcbB D DSOUD_0972 membrane-bound lytic murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D DSOUD_0400 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D DSOUD_2238 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D DSOUD_0427 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D DSOUD_1639 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D DSOUD_0853 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_1741 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_1188 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:des01004] D DSOUD_2033 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DSOUD_0378 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DSOUD_2450 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_0206 fabH-1; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_2034 fabH-2; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_1244 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DSOUD_1215 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D DSOUD_2030 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1217 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1228 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1229 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1236 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_1237 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DSOUD_2032 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1214 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DSOUD_1226 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DSOUD_1666 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DSOUD_2240 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DSOUD_3056 acyl-CoA hydrolase K17361 ACOT9; acyl-coenzyme A thioesterase 9 [EC:3.1.2.-] D DSOUD_3291 lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D DSOUD_1815 (3S)-malyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D DSOUD_0953 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2009 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_0318 long-chain acyl-CoA synthetase [AMP-forming] K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2375 acyl-CoA synthetase, AMP-forming K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D DSOUD_2035 plsX; phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DSOUD_0428 plsY; acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DSOUD_1914 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_0945 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DSOUD_1219 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:des01008] D DSOUD_2650 PfaD family protein K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains C 01006 Prenyltransferases [BR:des01006] D DSOUD_2395 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DSOUD_2310 ispB; geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DSOUD_1333 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DSOUD_1712 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DSOUD_3457 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DSOUD_0276 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D DSOUD_0983 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:des01007] D DSOUD_1804 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DSOUD_0191 glnS; glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DSOUD_3205 yadB; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D DSOUD_2729 tyrS; tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DSOUD_3039 trpS; tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DSOUD_0192 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DSOUD_2805 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DSOUD_1942 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DSOUD_0484 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DSOUD_1127 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DSOUD_1920 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DSOUD_1660 lysS; lysyl-tRNA ligase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DSOUD_1475 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DSOUD_3047 asnS; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DSOUD_1476 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DSOUD_3013 glyQ; glycyl-tRNA ligase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DSOUD_3012 glyS; glycyl-tRNA ligase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DSOUD_0286 serS; seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DSOUD_2873 proS; prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DSOUD_1964 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DSOUD_0929 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DSOUD_1960 pheS; phenylalanyl-tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DSOUD_1959 pheT; phenylalanyl-tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DSOUD_1379 aspartate/methionine/tyrosine aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DSOUD_0341 aspartate/methionine/tyrosine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DSOUD_0914 dapL; L,L-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DSOUD_0280 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DSOUD_0924 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DSOUD_1909 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D DSOUD_0247 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DSOUD_3094 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_1057 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DSOUD_2104 dTDP-4-amino-4,6-dideoxygalactose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:des00194] D DSOUD_2442 cytochrome b6 K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D DSOUD_1848 Rieske Fe-S protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D DSOUD_3578 atpC; ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DSOUD_3579 atpD; ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DSOUD_3580 atpG; ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DSOUD_3581 atpA; ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DSOUD_3582 atpH; ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DSOUD_3583 atpF; ATP synthase F0 b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DSOUD_3584 atpX; ATP synthase F0 b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DSOUD_0215 atpE; ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DSOUD_0216 atpB; ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DSOUD_0218 atpZ; putative F0F1-ATPase subunit K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:des03000] D DSOUD_2640 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_1563 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_0532 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_2219 transcriptional regulator, LysR family K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D DSOUD_1094 hypothetical protein K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor D DSOUD_3577 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DSOUD_2365 hypothetical protein K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor D DSOUD_0895 transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D DSOUD_0896 transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D DSOUD_1174 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DSOUD_3133 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D DSOUD_2658 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D DSOUD_2001 DNA-binding transcriptional regulator, MerR family K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon D DSOUD_1267 fur; ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DSOUD_2550 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D DSOUD_1029 Fe2+/Zn2+ uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D DSOUD_2741 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DSOUD_0317 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DSOUD_0956 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DSOUD_1900 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DSOUD_3072 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DSOUD_0116 cAMP-binding domain of CRP/regulatory subunit of cAMP-dependent protein kinase K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DSOUD_1997 fnr; transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D DSOUD_2210 iscR-2; transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D DSOUD_3333 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D DSOUD_1270 ideR; Mn-dependent transcriptional regulator, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D DSOUD_2389 birA; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DSOUD_0833 transcriptional regulator, Nlp family K07724 ner; Ner family transcriptional regulator D DSOUD_1552 hypothetical protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D DSOUD_2285 putative zinc finger/helix-turn-helix protein, YgiT family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D DSOUD_2878 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DSOUD_2553 sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family K15836 fhlA; formate hydrogenlyase transcriptional activator D DSOUD_3031 Fis family sigma54-specific transcriptional regulator with PAS/PAC sensor K15836 fhlA; formate hydrogenlyase transcriptional activator D DSOUD_3032 sigma54-specific transcriptional regulator with PAS/PAC sensor, Fis family K15836 fhlA; formate hydrogenlyase transcriptional activator D DSOUD_0594 DNA-binding transcriptional regulator ModE, molybdenum-dependent K02019 modE; molybdate transport system regulatory protein D DSOUD_2263 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator D DSOUD_2267 putative DNA-binding protein K07726 K07726; putative transcriptional regulator D DSOUD_0642 transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D DSOUD_3586 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DSOUD_0188 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D DSOUD_0181 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D DSOUD_2655 glycine cleavage system regulatory protein K03567 gcvR; glycine cleavage system transcriptional repressor D DSOUD_1045 rnk-1; GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase D DSOUD_1878 pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DSOUD_3347 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_2046 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_0494 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_2026 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D DSOUD_2933 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:des03021] D DSOUD_2823 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DSOUD_2855 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DSOUD_2854 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DSOUD_1692 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DSOUD_3185 rpoD; RNA polymerase sigma-70 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D DSOUD_1951 RNA polymerase, sigma 38 subunit, RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D DSOUD_2339 rpoH; RNA polymerase sigma-32 factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D DSOUD_1301 rpoN; RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D DSOUD_1758 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D DSOUD_2021 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D DSOUD_2860 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D DSOUD_3384 serine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DSOUD_0556 serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DSOUD_1392 rsbV; anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DSOUD_1391 rsbW; anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DSOUD_1593 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC D DSOUD_3347 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_2046 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_0494 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_1883 rnk-2; GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D DSOUD_2539 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D DSOUD_3202 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:des03019] D DSOUD_2234 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D DSOUD_0503 cafA; RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D DSOUD_1938 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DSOUD_0944 beta-CASP ribonuclease, RNase J family K12574 rnj; ribonuclease J [EC:3.1.-.-] D DSOUD_2731 rny; metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D DSOUD_2165 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DSOUD_1206 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D DSOUD_2814 rhlB; RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D DSOUD_2540 rhlE-3; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DSOUD_1085 rhlE-1; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DSOUD_1406 rhlE-2; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DSOUD_2198 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D DSOUD_0109 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DSOUD_0270 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DSOUD_1649 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DSOUD_1766 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DSOUD_3202 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D DSOUD_2302 pfk-2; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DSOUD_0183 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DSOUD_3377 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DSOUD_1713 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D DSOUD_1836 ccaC; tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DSOUD_3456 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DSOUD_1305 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D DSOUD_2772 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:des03011] D DSOUD_0221 30S ribosomal protein L1 K02945 RP-S1; small subunit ribosomal protein S1 D DSOUD_1385 rpsA; 30S ribosomal protein L1 K02945 RP-S1; small subunit ribosomal protein S1 D DSOUD_1328 rpsB; 30S ribosomal protein L2 K02967 RP-S2; small subunit ribosomal protein S2 D DSOUD_2842 rpsC; 30S ribosomal protein L3 K02982 RP-S3; small subunit ribosomal protein S3 D DSOUD_2824 rpsD; 30S ribosomal protein L4 K02986 RP-S4; small subunit ribosomal protein S4 D DSOUD_2832 rpsE; 30S ribosomal protein L5 K02988 RP-S5; small subunit ribosomal protein S5 D DSOUD_2673 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DSOUD_2852 rpsG; 30S ribosomal protein L7 K02992 RP-S7; small subunit ribosomal protein S7 D DSOUD_2835 rpsH; 30S ribosomal protein L8 K02994 RP-S8; small subunit ribosomal protein S8 D DSOUD_1356 rpsI; 30S ribosomal protein L9 K02996 RP-S9; small subunit ribosomal protein S9 D DSOUD_2849 rpsJ; 30S ribosomal protein L10 K02946 RP-S10; small subunit ribosomal protein S10 D DSOUD_2825 rpsK; 30S ribosomal protein L11 K02948 RP-S11; small subunit ribosomal protein S11 D DSOUD_2853 rpsL; 30S ribosomal protein L12 K02950 RP-S12; small subunit ribosomal protein S12 D DSOUD_2826 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DSOUD_1765 rpsO; 30S ribosomal protein L15 K02956 RP-S15; small subunit ribosomal protein S15 D DSOUD_2947 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DSOUD_2839 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DSOUD_2672 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DSOUD_2844 rpsS; 30S ribosomal protein L19 K02965 RP-S19; small subunit ribosomal protein S19 D DSOUD_1917 rpsT; 30S ribosomal protein L20 K02968 RP-S20; small subunit ribosomal protein S20 D DSOUD_2473 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DSOUD_2858 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DSOUD_2845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DSOUD_2848 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DSOUD_2847 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DSOUD_2836 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DSOUD_2834 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DSOUD_2670 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DSOUD_2857 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DSOUD_2859 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DSOUD_2856 rplL; 50S ribosomal protein L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DSOUD_1355 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DSOUD_2838 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DSOUD_2830 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DSOUD_2841 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DSOUD_2822 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DSOUD_2833 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DSOUD_2942 rplS; 30S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DSOUD_1961 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DSOUD_0502 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DSOUD_2843 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DSOUD_2846 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DSOUD_2837 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DSOUD_0501 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DSOUD_1695 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DSOUD_2840 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DSOUD_2831 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DSOUD_3201 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DSOUD_2036 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DSOUD_2863 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DSOUD_3592 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DSOUD_1962 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DSOUD_2677 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D DSOUD_2717 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DSOUD_2723 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DSOUD_2722 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DSOUD_2728 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DSOUD_2718 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DSOUD_2724 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:des03009] D DSOUD_1938 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DSOUD_0095 serine/threonine-protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D DSOUD_1936 era; GTP-binding protein Era K03595 era; GTPase D DSOUD_0500 obgE; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D DSOUD_3347 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_2046 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_0494 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D DSOUD_1758 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D DSOUD_2021 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D DSOUD_2860 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D DSOUD_1585 rsmA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D DSOUD_3435 rsmB; 16S rRNA (5-methyl-C967)-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D DSOUD_1946 putative DNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D DSOUD_3147 rsmE-1; RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D DSOUD_1751 rsmE-2; RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D DSOUD_3588 gidB; 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DSOUD_2932 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D DSOUD_2937 rsmI; 16S rRNA (2'-O-methyl-C1402)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DSOUD_2052 TlyA family rRNA methyltransferase/putative hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D DSOUD_2870 rlmB; 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D DSOUD_2566 16S rRNA G1207 methyltransferase RsmC K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D DSOUD_0495 rlmH; 23S rRNA pseudoU1915 N3-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D DSOUD_1032 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D DSOUD_0231 23S rRNA G2069 N7-methyltransferase RlmK or C1962 C5-methylase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D DSOUD_1447 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D DSOUD_1416 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D DSOUD_2244 23S rRNA m(2)G-2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D DSOUD_1463 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D DSOUD_1195 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D DSOUD_2875 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D DSOUD_1755 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D DSOUD_0133 pseudouridylate synthase, 23S rRNA-or tRNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D DSOUD_1707 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D DSOUD_2565 pseudouridylate synthase, 23S rRNA-or tRNA-specific K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D DSOUD_3115 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DSOUD_1529 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DSOUD_1388 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DSOUD_2205 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DSOUD_1700 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D DSOUD_2945 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D DSOUD_3547 rimO; 30S ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D DSOUD_3146 prmA; [50S ribosomal protein L11]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D DSOUD_2234 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D DSOUD_0503 cafA; RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D DSOUD_0246 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D DSOUD_2198 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D DSOUD_0226 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D DSOUD_1935 engA; ribosome-associated GTPase EngA K03977 engA; GTPase D DSOUD_1178 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D DSOUD_2239 GTP-binding protein HflX K03665 hflX; GTPase D DSOUD_1693 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DSOUD_2045 phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DSOUD_1762 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D DSOUD_1757 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D DSOUD_0275 RNA-binding protein K14761 rlbA; ribosome-associated protein D DSOUD_0496 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein D DSOUD_1652 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor D DSOUD_1944 yhbY; putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein D DSOUD_3155 hypothetical protein K09889 yjgA; ribosome-associated protein D DSOUD_1302 raiA; 30S ribosomal protein S30/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor D DSOUD_2674 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D DSOUD_2037 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:des03016] D DSOUD_0370 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D DSOUD_1703 ccaA; tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D DSOUD_0074 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D DSOUD_0075 archease superfamily protein K24956 ZBTB8OS; protein archease D DSOUD_1804 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DSOUD_2873 proS; prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DSOUD_0484 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DSOUD_1920 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DSOUD_1942 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DSOUD_0191 glnS; glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DSOUD_2805 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DSOUD_1660 lysS; lysyl-tRNA ligase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DSOUD_1475 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DSOUD_0929 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DSOUD_3047 asnS; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DSOUD_1964 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DSOUD_0286 serS; seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DSOUD_0192 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DSOUD_1127 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DSOUD_1476 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DSOUD_1960 pheS; phenylalanyl-tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DSOUD_1959 pheT; phenylalanyl-tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DSOUD_2729 tyrS; tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DSOUD_3039 trpS; tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DSOUD_3154 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D DSOUD_2047 hinT; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DSOUD_0962 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D DSOUD_1353 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D DSOUD_1764 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D DSOUD_0961 truD; tRNA pseudouridine synthase, TruD family K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D DSOUD_2209 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DSOUD_1712 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DSOUD_3457 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DSOUD_3590 mnmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D DSOUD_3589 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DSOUD_2905 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D DSOUD_3181 bacterial RNase P class A K01978 rnpB; M1 RNA D DSOUD_1189 rph; RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D DSOUD_0282 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D DSOUD_0933 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D DSOUD_0602 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA D DSOUD_3013 glyQ; glycyl-tRNA ligase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DSOUD_3012 glyS; glycyl-tRNA ligase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DSOUD_3205 yadB; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D DSOUD_0291 tadA; tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D DSOUD_0638 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D DSOUD_1022 nifR3; tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D DSOUD_1628 miaB; dimethylallyladenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D DSOUD_2206 mtaB; MiaB-like tRNA modifying enzyme MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D DSOUD_1821 tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D DSOUD_1822 tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D DSOUD_0219 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D DSOUD_1752 trmJ; RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D DSOUD_0727 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D DSOUD_2944 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D DSOUD_2017 tRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D DSOUD_2189 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D DSOUD_0133 pseudouridylate synthase, 23S rRNA-or tRNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D DSOUD_2207 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DSOUD_1362 queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D DSOUD_3570 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D DSOUD_1839 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DSOUD_1840 queE; radical SAM protein/7-cyano-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D DSOUD_0795 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D DSOUD_2121 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D DSOUD_2710 putative ATPase, adenine nucleotide alpha hydrolases (AANH) superfamily K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D DSOUD_3224 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D DSOUD_1641 tgt-1; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D DSOUD_1363 tgt-2; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D DSOUD_2801 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D DSOUD_1337 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D DSOUD_1583 ygjD; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D DSOUD_2791 yjeE; tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D DSOUD_0346 tRNA A37 threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D DSOUD_2490 putative nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D DSOUD_2165 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DSOUD_1766 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:des03012] D DSOUD_3113 yciH; translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D DSOUD_1760 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D DSOUD_1963 infC; bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D DSOUD_0778 glycosyl transferase family 1 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D DSOUD_2233 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D DSOUD_1329 tsf; translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D DSOUD_2850 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DSOUD_2864 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DSOUD_2851 fusA; translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DSOUD_3385 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DSOUD_2387 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DSOUD_2904 selB; selenocysteine-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor D DSOUD_3199 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D DSOUD_1331 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D DSOUD_3198 hemK; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D DSOUD_2676 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D DSOUD_1921 infA; bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D DSOUD_3082 efp-1; translation initiation factor 5A precursor (eIF-5A) K02356 efp; elongation factor P D DSOUD_3083 efp-2; translation elongation factor P (EF-P) K02356 efp; elongation factor P D DSOUD_3084 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D DSOUD_1658 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D DSOUD_3049 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D DSOUD_2654 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:des03110] D DSOUD_2478 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D DSOUD_0058 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D DSOUD_2423 clpX; endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DSOUD_0926 ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D DSOUD_2528 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DSOUD_0183 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DSOUD_3377 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DSOUD_0184 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D DSOUD_2659 integrase K05516 cbpA; curved DNA-binding protein D DSOUD_3542 hslO; redox-regulated molecular chaperone, HSP33 family K04083 hslO; molecular chaperone Hsp33 D DSOUD_0182 grpE; heat shock co-chapterone protein GrpE K03687 GRPE; molecular chaperone GrpE D DSOUD_0060 hspA-2; molecular chaperone IbpA, HSP20 family K13993 HSP20; HSP20 family protein D DSOUD_0749 hspA-1; heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D DSOUD_0762 molecular chaperone IbpA, HSP20 family K13993 HSP20; HSP20 family protein D DSOUD_0059 molecular chaperone IbpA, HSP20 family K13993 HSP20; HSP20 family protein D DSOUD_3378 groES; molecular chaperone GroES K04078 groES; chaperonin GroES D DSOUD_0146 degQ; periplasmic trypsin-like serine protease lipoprotein DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_0369 degP; periplasmic trypsin-like serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D DSOUD_2800 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DSOUD_1647 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DSOUD_0216 atpB; ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DSOUD_3313 hypA; hydrogenase-3 nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D DSOUD_3314 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D DSOUD_3336 molecular chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D DSOUD_3355 molecular chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D DSOUD_0008 ppiA; cytosolic peptidylprolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D DSOUD_1034 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D DSOUD_2200 potassium ABC transporter ATPase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D DSOUD_1103 parvulin-like peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D DSOUD_3060 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D DSOUD_3093 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D DSOUD_3176 parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D DSOUD_0132 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D DSOUD_1586 parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D DSOUD_3177 periplasmic chaperone for outer membrane proteins SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D DSOUD_3156 trxA; thioredoxin K03671 TXN; thioredoxin D DSOUD_3325 thioredoxin K03671 TXN; thioredoxin D DSOUD_3429 Glutaredoxin, GrxC family K03676 grxC; glutaredoxin 3 D DSOUD_2241 protein disulfide bond isomerase, DsbC/DsbG-like K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:des04131] D DSOUD_0424 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D DSOUD_1194 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DSOUD_2977 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_1777 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_3571 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DSOUD_2528 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DSOUD_2202 membrane protein, major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome [BR:des03051] D DSOUD_2528 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DSOUD_2994 AAA ATPase K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:des03032] D DSOUD_3403 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DSOUD_1415 5'-3' exonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DSOUD_2640 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_1563 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_0532 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_2626 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DSOUD_2421 lon-3; transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D DSOUD_1958 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D DSOUD_1903 ihfB-1; DNA-binding protein K05788 ihfB; integration host factor subunit beta D DSOUD_1387 ihfB-2; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D DSOUD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DSOUD_2669 dnaB; primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DSOUD_3186 dnaG; DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D DSOUD_0946 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DSOUD_1637 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DSOUD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DSOUD_1750 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DSOUD_1918 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DSOUD_1940 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DSOUD_3269 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DSOUD_0294 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DSOUD_2940 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DSOUD_0577 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DSOUD_3244 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_2935 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_0880 site-specific DNA-adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DSOUD_0005 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DSOUD_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DSOUD_0728 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:des03036] D DSOUD_2640 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_1563 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_0532 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_2125 hypothetical protein K20798 HENMT1; small RNA 2'-O-methyltransferase [EC:2.1.1.386] D DSOUD_1938 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DSOUD_2626 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DSOUD_2421 lon-3; transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D DSOUD_1958 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D DSOUD_1903 ihfB-1; DNA-binding protein K05788 ihfB; integration host factor subunit beta D DSOUD_1387 ihfB-2; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D DSOUD_2659 integrase K05516 cbpA; curved DNA-binding protein D DSOUD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DSOUD_1713 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D DSOUD_2737 condensin subunit Smc K03529 smc; chromosome segregation protein D DSOUD_1705 scpA; condensin subunit ScpA K05896 scpA; segregation and condensation protein A D DSOUD_1706 scpB; condensin subunit ScpB K06024 scpB; segregation and condensation protein B D DSOUD_2919 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D DSOUD_2806 cell division protein FtsB K05589 ftsB; cell division protein FtsB D DSOUD_2404 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DSOUD_2930 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DSOUD_0942 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DSOUD_2931 cell division protein FtsL K03586 ftsL; cell division protein FtsL D DSOUD_2920 ftsQ; cell division septal protein FtsQ K03589 ftsQ; cell division protein FtsQ D DSOUD_2925 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D DSOUD_2403 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D DSOUD_2918 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DSOUD_2733 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D DSOUD_0853 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_1741 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_1188 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DSOUD_2595 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2499 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_0897 acrA; RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2465 putative cell division protein DivIVA K04074 divIVA; cell division initiation protein D DSOUD_1044 putative actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D DSOUD_1104 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DSOUD_1105 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D DSOUD_1106 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D DSOUD_1108 rodA; cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D DSOUD_2399 ParA family chromosome partitioning protein K03496 parA; chromosome partitioning protein D DSOUD_3587 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D DSOUD_3586 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DSOUD_3589 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DSOUD_3588 gidB; 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DSOUD_0727 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D DSOUD_1284 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D DSOUD_1443 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D DSOUD_3443 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D DSOUD_3493 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D DSOUD_1743 xerD; tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD D DSOUD_0609 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:des03400] D DSOUD_1915 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D DSOUD_0281 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DSOUD_0010 endonuclease III-related DNA glycosidase, HhH-GPD superfamily K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DSOUD_0920 ADP-ribose pyrophosphatase YjhB, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DSOUD_0529 ADP-ribose pyrophosphatase YjhB, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DSOUD_2884 ADP-ribose pyrophosphatase YjhB K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DSOUD_1768 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DSOUD_1210 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DSOUD_2813 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DSOUD_0220 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D DSOUD_1403 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DSOUD_3110 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DSOUD_3153 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D DSOUD_3009 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D DSOUD_1369 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DSOUD_3244 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_2935 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DSOUD_0577 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DSOUD_0367 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D DSOUD_0193 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DSOUD_3070 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DSOUD_3096 rep; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DSOUD_0045 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DSOUD_2855 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DSOUD_2854 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DSOUD_2823 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DSOUD_1692 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DSOUD_3175 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DSOUD_1740 mutS-1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DSOUD_3187 mutS-2; MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D DSOUD_1711 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D DSOUD_2398 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DSOUD_2396 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DSOUD_1637 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DSOUD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DSOUD_1750 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DSOUD_1918 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DSOUD_1940 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DSOUD_3269 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DSOUD_0294 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DSOUD_0946 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DSOUD_0880 site-specific DNA-adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DSOUD_2068 recB; DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D DSOUD_2069 recC; DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D DSOUD_2067 recD; DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DSOUD_0932 recA; recombinase RecA K03553 recA; recombination protein RecA D DSOUD_2705 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DSOUD_2706 ruvB; Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DSOUD_2704 ruvC; Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DSOUD_0967 priA; replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D DSOUD_2484 DNA repair exonuclease SbcCD ATPase subunit K03546 sbcC; DNA repair protein SbcC/Rad50 D DSOUD_2483 exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D DSOUD_3350 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D DSOUD_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D DSOUD_1885 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DSOUD_3014 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DSOUD_0296 recR; DNA replication and repair protein RecR K06187 recR; recombination protein RecR D DSOUD_1113 recN; DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D DSOUD_3383 putative exonuclease RdgC K03554 rdgC; recombination associated protein RdgC D DSOUD_0517 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D DSOUD_0005 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DSOUD_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DSOUD_0728 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DSOUD_2626 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DSOUD_2421 lon-3; transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D DSOUD_1958 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D DSOUD_1903 ihfB-1; DNA-binding protein K05788 ihfB; integration host factor subunit beta D DSOUD_1387 ihfB-2; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D DSOUD_0109 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DSOUD_0270 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DSOUD_0036 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D DSOUD_3576 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D DSOUD_0037 lexA; SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DSOUD_0035 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D DSOUD_0930 recX; SOS response regulatory protein OraA/RecX K03565 recX; regulatory protein D DSOUD_3471 dinG; ATP-dependent Rad3-related DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D DSOUD_1564 nrdJ; ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DSOUD_1763 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:des03029] D DSOUD_2441 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D DSOUD_1760 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D DSOUD_1963 infC; bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D DSOUD_1329 tsf; translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D DSOUD_2850 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DSOUD_2864 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DSOUD_2851 fusA; translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DSOUD_3385 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DSOUD_2387 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DSOUD_1936 era; GTP-binding protein Era K03595 era; GTPase D DSOUD_2729 tyrS; tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DSOUD_1920 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DSOUD_1475 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DSOUD_2805 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DSOUD_0589 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DSOUD_0588 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DSOUD_0590 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DSOUD_0946 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DSOUD_1663 yaeT; beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D DSOUD_0183 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DSOUD_0182 grpE; heat shock co-chapterone protein GrpE K03687 GRPE; molecular chaperone GrpE D DSOUD_3377 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DSOUD_3378 groES; molecular chaperone GroES K04078 groES; chaperonin GroES D DSOUD_0184 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D DSOUD_2209 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DSOUD_0983 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DSOUD_3591 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DSOUD_0978 sco; cytochrome c oxidase Cu insertion factor K07152 SCO1; protein SCO1 D DSOUD_2528 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:des02000] D DSOUD_1669 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D DSOUD_2131 N-terminal double-glycine peptidase domain-containing ABC-type bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D DSOUD_0238 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DSOUD_1493 uup; DNA-binding ATPase Uup K15738 uup; ABC transport system ATP-binding/permease protein D DSOUD_2518 modA; molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DSOUD_2517 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D DSOUD_2516 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D DSOUD_1005 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K05776 modF; molybdate transport system ATP-binding protein D DSOUD_1072 tupA; ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D DSOUD_1071 tupB; ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D DSOUD_1070 carbohydrate ABC transporter ATP-binding protein, CUT1 family K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D DSOUD_1212 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein D DSOUD_1211 ABC-type polar amino acid transport system, ATPase component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D DSOUD_1832 ABC-type transporter Mla maintaining outer membrane lipid asymmetry, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DSOUD_1830 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DSOUD_1831 ABC-type transporter Mla maintaining outer membrane lipid asymmetry, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DSOUD_3305 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_3328 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_0069 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_1996 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D DSOUD_0068 ABC transporter permease K02037 pstC; phosphate transport system permease protein D DSOUD_0067 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D DSOUD_0066 pstB; phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DSOUD_0322 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D DSOUD_0320 livH; amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D DSOUD_0321 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D DSOUD_0319 livG; amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D DSOUD_0323 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D DSOUD_1398 ABC-type transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DSOUD_1399 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D DSOUD_1401 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DSOUD_1143 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D DSOUD_1142 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DSOUD_2549 ABC-type Zn2+ transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D DSOUD_2552 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D DSOUD_2551 ABC-type Mn2+/Zn2+ transport system, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DSOUD_0622 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D DSOUD_0623 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D DSOUD_0641 nikQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D DSOUD_0621 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D DSOUD_0647 nikMN; ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D DSOUD_0624 cbiO; cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DSOUD_0640 nikO; cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DSOUD_1352 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D DSOUD_1327 lptF; lipopolysaccharide export LptBFGC system, permease protein LptF K07091 lptF; lipopolysaccharide export system permease protein D DSOUD_1326 lptG; lipopolysaccharide export LptBFGC system, permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein D DSOUD_1300 lptB; ABC-type lipopolysaccharide export system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D DSOUD_0892 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein D DSOUD_0893 ABC-type multidrug transport system, ATPase component K09695 nodI; lipooligosaccharide transport system ATP-binding protein D DSOUD_1661 lolE; lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D DSOUD_3367 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D DSOUD_1662 lolD; ABC-type lipoprotein export system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DSOUD_2403 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D DSOUD_2404 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DSOUD_3169 ABC-type polysaccharide/polyol phosphate export permease K01992 ABC-2.P; ABC-2 type transport system permease protein D DSOUD_2593 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D DSOUD_1242 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D DSOUD_2592 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DSOUD_3170 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DSOUD_1241 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DSOUD_2156 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DSOUD_2602 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D DSOUD_1289 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D DSOUD_3366 ABC-type lipoprotein export system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DSOUD_2603 ABC-type lipoprotein export system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DSOUD_2332 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DSOUD_1290 ABC-type lipoprotein export system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DSOUD_3209 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D DSOUD_2306 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D DSOUD_0792 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D DSOUD_0721 Na+-driven multidrug efflux pump K22734 ANKH; progressive ankylosis protein D DSOUD_3079 nitrate/nitrite transporter NarK K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D DSOUD_0245 putative arabinose efflux permease, MFS family K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D DSOUD_2202 membrane protein, major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family D DSOUD_1311 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DSOUD_1140 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D DSOUD_1310 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D DSOUD_1306 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DSOUD_1308 phosphotransferase system sorbose-specific IIC component K02795 manY; mannose PTS system EIIC component D DSOUD_1309 phosphotransferase system IID component, Man family K02796 manZ; mannose PTS system EIID component D DSOUD_1307 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D DSOUD_1139 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DSOUD_1303 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DSOUD_3575 Trk K+ transport system, NAD-binding component K10716 kch; voltage-gated potassium channel D DSOUD_0271 voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel D DSOUD_3207 ammonium transporter K03320 amt; ammonium transporter, Amt family D DSOUD_3090 amtB-2; ammonium transporter K03320 amt; ammonium transporter, Amt family D DSOUD_1461 amtB-1; ammonium transporter K03320 amt; ammonium transporter, Amt family D DSOUD_0561 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DSOUD_0141 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D DSOUD_0142 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D DSOUD_3476 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D DSOUD_2343 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D DSOUD_2344 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D DSOUD_1378 fdhC; formate/nitrite transporter K21993 fdhC; formate transporter D DSOUD_2564 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D DSOUD_0204 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D DSOUD_1499 small-conductance mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel D DSOUD_1164 small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D DSOUD_0750 small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein D DSOUD_3015 magnesium transporter K06213 mgtE; magnesium transporter D DSOUD_0825 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_2392 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_3372 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D DSOUD_2057 biopolymer transport protein ExbB/TolQ K03561 exbB; biopolymer transport protein ExbB D DSOUD_0437 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D DSOUD_3371 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D DSOUD_2056 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D DSOUD_3565 cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D DSOUD_3564 cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D DSOUD_3054 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D DSOUD_2338 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter D DSOUD_2934 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DSOUD_1073 phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D DSOUD_3027 outer membrane protein OmpA/peptidoglycan-associated (lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DSOUD_1400 outer membrane protein OmpA/peptidoglycan-associated (lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DSOUD_0235 outer membrane protein OmpA/peptidoglycan-associated (lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DSOUD_2246 peptidoglycan-binding outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DSOUD_2010 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D DSOUD_2018 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D DSOUD_3277 ligand-gated TonB-dependent outer membrane channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DSOUD_3376 outer membrane Fe transport receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DSOUD_1096 outer membrane Fe transport receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DSOUD_2901 outer membrane protein TolC K15725 czcC; outer membrane protein, heavy metal efflux system D DSOUD_1850 outer membrane protein TolC K15725 czcC; outer membrane protein, heavy metal efflux system D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2501 RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system D DSOUD_0509 efflux pump, outer membrane protein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system D DSOUD_0899 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D DSOUD_2291 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D DSOUD_2111 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D DSOUD_1663 yaeT; beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D DSOUD_2346 yfiO; beta-barrel assembly machine subunit BamD/outer membrane protein assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D DSOUD_1192 autotransporter secretion outer membrane protein TamA K07278 tamA; translocation and assembly module TamA D DSOUD_1193 autotransporter secretion inner membrane protein TamB K09800 tamB; translocation and assembly module TamB D DSOUD_0516 hypothetical protein K21449 ata; trimeric autotransporter adhesin D DSOUD_1299 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D DSOUD_1298 lptC; lipopolysaccharide export system protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D DSOUD_2808 lptD; LPS biogenesis outer membrane protein LptD K04744 lptD; LPS-assembly protein D DSOUD_1654 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D DSOUD_1719 murein hydrolase regulator LrgA K06518 cidA; holin-like protein D DSOUD_0165 dmeF; cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D DSOUD_1738 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D DSOUD_1007 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D DSOUD_2899 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D DSOUD_1852 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D DSOUD_2594 Multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_2500 multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_0898 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D DSOUD_2176 acriflavin resistance protein/RND family efflux transporter K18989 vexF; multidrug efflux pump D DSOUD_2366 sugE_emrE; quaternary ammonium compound resistance transporter SugE/small MDR family transporter EmrE K11741 sugE; quaternary ammonium compound-resistance protein SugE D DSOUD_2608 dcuB; anaerobic C4-dicarboxylate membrane transporter family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D DSOUD_3330 K+-dependent Na+/Ca+ exchanger-like protein K07301 yrbG; cation:H+ antiporter D DSOUD_1449 K+-dependent Na+/Ca+ exchanger-like protein K07301 yrbG; cation:H+ antiporter D DSOUD_3045 sodium:solute symporter family K14393 actP; cation/acetate symporter D DSOUD_2743 putative sodium:solute symporter K14393 actP; cation/acetate symporter D DSOUD_2747 putative sodium:solute symporter K14393 actP; cation/acetate symporter D DSOUD_0959 aplD; putative sodium:solute symporter K14393 actP; cation/acetate symporter D DSOUD_0486 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D DSOUD_2509 potassium transporter KefB K26735 KEA4_5_6; K+:H+ antiporter D DSOUD_2563 Kef-type K+ transport system, membrane component KefB K26731 CHX; K+:H+ antiporter D DSOUD_3112 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D DSOUD_3320 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D DSOUD_3111 Trk K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D DSOUD_3321 Trk K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D DSOUD_3167 Trk K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D DSOUD_0969 uraA; uracil/xanthine permease K02824 uraA; uracil permease D DSOUD_1099 pbuG; AzgA family xanthine/uracil/guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D DSOUD_0046 clcA; H+/Cl-antiporter ClcA K03281 clcA; chloride channel protein, CIC family D DSOUD_0770 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D DSOUD_2123 sulfate transporter, MFS superfamily K03321 TC.SULP; sulfate permease, SulP family D DSOUD_2581 tripartite ATP-independent periplasmic transporter solute receptor, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP D DSOUD_2583 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D DSOUD_0357 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D DSOUD_2582 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D DSOUD_0396 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D DSOUD_1793 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D DSOUD_0356 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein D DSOUD_1791 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein D DSOUD_1898 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter D DSOUD_3331 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter D DSOUD_0173 putative MnhB subunit of Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D DSOUD_0174 multisubunit sodium/proton antiporter, MrpC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D DSOUD_0175 multisubunit sodium/proton antiporter, MrpD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DSOUD_0176 multisubunit sodium/proton antiporter, MrpD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DSOUD_0179 multisubunit sodium/proton antiporter, MrpD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DSOUD_0168 multisubunit sodium/proton antiporter, MrpE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D DSOUD_0169 multisubunit Na+/H+ antiporter, MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D DSOUD_0170 multisubunit sodium/proton antiporter, MrpG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D DSOUD_1916 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D DSOUD_0405 putative permease K24180 mleP; malate permease and related proteins D DSOUD_1260 putative permease K24180 mleP; malate permease and related proteins D DSOUD_1834 putative permease K24180 mleP; malate permease and related proteins D DSOUD_1059 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D DSOUD_1060 branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump D DSOUD_3073 putative PurR-regulated permease PerM K03548 perM; putative permease D DSOUD_2298 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein D DSOUD_2925 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D DSOUD_2242 putative Mn2+ efflux pump MntP K23242 mntP; manganese efflux pump family protein D DSOUD_0610 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D DSOUD_3370 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D DSOUD_2452 putative TonB-dependent receptor K03832 tonB; periplasmic protein TonB D DSOUD_1095 hypothetical protein K03832 tonB; periplasmic protein TonB D DSOUD_2526 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D DSOUD_3561 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D DSOUD_3563 cell division and transport-associated protein TolA K03646 tolA; colicin import membrane protein D DSOUD_3562 translocation protein TolB K03641 tolB; TolB protein D DSOUD_2675 hppA; V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D DSOUD_0389 Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D DSOUD_0388 malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D DSOUD_0395 biotin-independent malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D DSOUD_0386 biotin-independent malonate decarboxylase, beta subunit K20510 madC; malonyl-S-ACP:biotin-protein carboxyltransferase subunit MadC [EC:2.1.3.10] D DSOUD_0385 biotin-independent malonate decarboxylase, gamma subunit K20511 madD; malonyl-S-ACP:biotin-protein carboxyltransferase subunit MadD [EC:2.1.3.10] D DSOUD_0387 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D DSOUD_0394 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D DSOUD_3326 dsbD; cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D DSOUD_1266 ccdA; cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D DSOUD_0599 anaerobic selenocysteine-containing dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D DSOUD_2900 RND family efflux transporter, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D DSOUD_1851 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D DSOUD_2127 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D DSOUD_0353 RND family efflux transporter, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D DSOUD_2595 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2499 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_0897 acrA; RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2177 RND family efflux transporter, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system D DSOUD_2973 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D DSOUD_2109 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D DSOUD_2110 polysaccharide chain length determinant protein K25590 epsF; protein tyrosine kinase modulator D DSOUD_2290 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DSOUD_1553 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D DSOUD_1268 feoB; ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D DSOUD_0776 magnesium transporter MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DSOUD_2382 magnesium transporter MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:des02044] D DSOUD_2131 N-terminal double-glycine peptidase domain-containing ABC-type bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D DSOUD_2127 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_1842 exeA; type II secretory pathway, ExeA component K02450 gspA; general secretion pathway protein A D DSOUD_1912 type II secretory pathway, ExeA component K02450 gspA; general secretion pathway protein A D DSOUD_1710 type II secretory pathway, component ExeA (predicted ATPase) K02450 gspA; general secretion pathway protein A D DSOUD_1843 hypothetical protein K02451 gspB; general secretion pathway protein B D DSOUD_1911 hypothetical protein K02451 gspB; general secretion pathway protein B D DSOUD_0576 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D DSOUD_0575 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D DSOUD_2407 pulQ; type II secretion system secretin lipoprotein PulQ K02453 gspD; general secretion pathway protein D D DSOUD_0574 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DSOUD_0573 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D DSOUD_1508 hypothetical protein K02456 gspG; general secretion pathway protein G D DSOUD_0673 hypothetical protein K02456 gspG; general secretion pathway protein G D DSOUD_0690 hypothetical protein K02456 gspG; general secretion pathway protein G D DSOUD_0572 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D DSOUD_2405 oxpG; type II secretion system pseudopilin OxpG K02456 gspG; general secretion pathway protein G D DSOUD_2406 pulG; type II secretion system pseudopilin PulG K02456 gspG; general secretion pathway protein G D DSOUD_0570 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D DSOUD_0569 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D DSOUD_0568 gspK; type II secretion system protein GspK K02460 gspK; general secretion pathway protein K D DSOUD_0567 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D DSOUD_0566 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M D DSOUD_2153 pilD; type IV prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DSOUD_2157 type IV pilus assembly protein K02650 pilA; type IV pilus assembly protein PilA D DSOUD_2162 pilB; type IV pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D DSOUD_0481 type II secretory pathway ATPase GspE/PulE/T4P pilus assembly pathway ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D DSOUD_2412 pulE; type II secretion system assembly protein PulE K02652 pilB; type IV pilus assembly protein PilB D DSOUD_0480 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D DSOUD_2160 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D DSOUD_2413 pulF; type II secretion system assembly protein PulF K02653 pilC; type IV pilus assembly protein PilC D DSOUD_2151 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D DSOUD_2411 pulM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D DSOUD_2150 pilN; type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D DSOUD_2149 pilO; type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D DSOUD_2409 type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D DSOUD_2148 pilP; type IV pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D DSOUD_2147 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D DSOUD_0931 pilT-1; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D DSOUD_0339 pilT-3; pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D DSOUD_2161 pilT-4; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D DSOUD_0328 pilT-2; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D DSOUD_2168 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D DSOUD_2169 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D DSOUD_2166 pilus assembly protein PilY K02674 pilY1; type IV pilus assembly protein PilY1 D DSOUD_2170 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D DSOUD_0475 type IV pilus secretin MshL K12282 mshL; MSHA biogenesis protein MshL D DSOUD_2466 hypothetical protein K02221 yggT; YggT family protein D DSOUD_2807 hypothetical protein K02237 comEA; competence protein ComEA D DSOUD_2787 ComEA-related DNA-binding/uptake protein K02237 comEA; competence protein ComEA D DSOUD_2027 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D DSOUD_1480 competence protein ComEC K02238 comEC; competence protein ComEC D DSOUD_2241 protein disulfide bond isomerase, DsbC/DsbG-like K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D DSOUD_3259 tssM; type VI secretion system ATPase and inner membrane protein TssM K11891 impL; type VI secretion system protein ImpL D DSOUD_3260 tssL; type VI secretion system inner membrane protein TssL K11892 impK; type VI secretion system protein ImpK D DSOUD_3261 tssK; type VI secretion system protein TssK K11893 impJ; type VI secretion system protein ImpJ D DSOUD_3251 tssG; type VI secretion system protein TssG K11895 impH; type VI secretion system protein ImpH D DSOUD_3252 tssF; type VI secretion system protein TssF K11896 impG; type VI secretion system protein ImpG D DSOUD_3255 tssC; type VI secretion system needle sheath protein TssC K11900 impC; type VI secretion system protein ImpC D DSOUD_3256 tssB; type VI secretion system needle sheath protein TssB K11901 impB; type VI secretion system protein ImpB D DSOUD_3254 tssD; type VI secretion system needle tube protein TssD K11903 hcp; type VI secretion system secreted protein Hcp D DSOUD_3249 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D DSOUD_0044 putative type VI secretion system needle syringe protein TssI K11904 vgrG; type VI secretion system secreted protein VgrG D DSOUD_3253 tssE; type VI secretion system needle hub protein TssE K11905 K11905; type VI secretion system protein D DSOUD_3262 tssJ; type VI secretion system outer membrane lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D DSOUD_3250 tssH; type VI secretion system ATPase TssH chaperone K11907 vasG; type VI secretion system protein VasG D DSOUD_3257 type VI secretion system protein K11910 vasJ; type VI secretion system protein VasJ D DSOUD_3258 type VI secretion system protein K11890 impM; type VI secretion system protein ImpM D DSOUD_1116 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DSOUD_1365 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D DSOUD_2861 secE; protein translocase subunit SecE/Sec61 gamma K03073 secE; preprotein translocase subunit SecE D DSOUD_2631 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D DSOUD_1366 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D DSOUD_1774 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DSOUD_2829 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DSOUD_2948 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DSOUD_2735 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DSOUD_1364 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DSOUD_3591 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DSOUD_2906 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_2447 tatB-2; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_0592 tatB-1; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DSOUD_2630 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DSOUD_3172 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:des02042] D DSOUD_2934 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DSOUD_1819 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:des02022] D DSOUD_3474 phoR; PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2666 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_2738 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DSOUD_0131 putative Fis family transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D DSOUD_2611 signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D DSOUD_2612 transcriptional regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D DSOUD_1976 multi-sensor hybrid histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D DSOUD_0371 sensor histidine kinase, HAMP domain-containing K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D DSOUD_2610 sensor histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D DSOUD_1021 gnfL; signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DSOUD_2116 nitrogen-specific signal transduction histidine kinase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DSOUD_1020 gnfM; two-component sigma54-specific transcriptional regulator, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D DSOUD_2715 PAS/PAC sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D DSOUD_2716 two component sigma54-specific transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D DSOUD_2193 signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DSOUD_1261 histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DSOUD_2171 two-component sigma54-specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D DSOUD_0063 sigma54 specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D DSOUD_2350 two-component sigma54-specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_0153 DNA-binding transcriptional response regulator, NtrC family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_1566 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_2307 two-component sigma54-specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_0888 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_0148 DNA-binding transcriptional response regulator, NtrC family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DSOUD_2159 pilS; sensor histidine kinase PilS, PAS domain-containing K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D DSOUD_2158 pilR; sigma-54-dependent transcriptional response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D DSOUD_2311 putative signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1459 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1255 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1066 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_3228 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_3074 cache sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_2172 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_0889 signal transduction histidine kinase regulating C4-dicarboxylate transport system K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_0130 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_0152 putative sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_1093 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DSOUD_2074 two-component sigma54-specific transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator D DSOUD_1485 cheA34H; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_3552 chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1932 cheA40H; chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1933 cheY40H-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1482 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1484 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_3553 cheY44H; putative REC superfamily histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1922 cheY40H-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1430 cheY34H; Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_2348 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_0104 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1489 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1924 cheB40H; protein-glutamate methylesterase domain-containing chemotaxis response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_3029 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DSOUD_3226 putative histidine kinase K19623 phcQ; two-component system, probable response regulator PhcQ D DSOUD_3279 signal transduction histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D DSOUD_2577 gnfR; transcriptional regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:des02035] D DSOUD_1485 cheA34H; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_3552 chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1932 cheA40H; chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DSOUD_1125 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1052 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_3554 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1928 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1930 cheW40H; chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1428 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1487 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_1124 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D DSOUD_3551 cheC44H; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D DSOUD_1491 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DSOUD_3550 cheD44H; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DSOUD_1488 cheR34H; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_3556 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_1925 cheR40H; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DSOUD_0104 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1489 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_1924 cheB40H; protein-glutamate methylesterase domain-containing chemotaxis response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DSOUD_3029 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DSOUD_1933 cheY40H-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1482 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1484 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_3553 cheY44H; putative REC superfamily histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1922 cheY40H-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_1430 cheY34H; Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_2348 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DSOUD_3329 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1053 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1183 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0419 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0458 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1429 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_1486 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_3452 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_3555 mcp44H; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DSOUD_0825 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_2392 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DSOUD_3311 chromosome partitioning protein ParA/flagellar basal body rod protein FlgG K04562 flhG; flagellar biosynthesis protein FlhG D DSOUD_2158 pilR; sigma-54-dependent transcriptional response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D DSOUD_2159 pilS; sensor histidine kinase PilS, PAS domain-containing K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D DSOUD_0931 pilT-1; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D DSOUD_0339 pilT-3; pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D DSOUD_2161 pilT-4; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D DSOUD_0328 pilT-2; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D DSOUD_2157 type IV pilus assembly protein K02650 pilA; type IV pilus assembly protein PilA D DSOUD_2162 pilB; type IV pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D DSOUD_0481 type II secretory pathway ATPase GspE/PulE/T4P pilus assembly pathway ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D DSOUD_2412 pulE; type II secretion system assembly protein PulE K02652 pilB; type IV pilus assembly protein PilB D DSOUD_0480 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D DSOUD_2160 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D DSOUD_2413 pulF; type II secretion system assembly protein PulF K02653 pilC; type IV pilus assembly protein PilC D DSOUD_2153 pilD; type IV prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DSOUD_2147 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D DSOUD_2148 pilP; type IV pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D DSOUD_2149 pilO; type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D DSOUD_2409 type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D DSOUD_2150 pilN; type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D DSOUD_2151 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D DSOUD_2411 pulM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D DSOUD_2168 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D DSOUD_2169 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D DSOUD_2166 pilus assembly protein PilY K02674 pilY1; type IV pilus assembly protein PilY1 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:des04812] D DSOUD_1803 dioxygenase K06990 MEMO1; MEMO1 family protein D DSOUD_1044 putative actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D DSOUD_1104 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DSOUD_1536 hypothetical protein K18640 parM; plasmid segregation protein ParM D DSOUD_2918 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DSOUD_2919 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D DSOUD_2399 ParA family chromosome partitioning protein K03496 parA; chromosome partitioning protein D DSOUD_3587 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D DSOUD_3586 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:des04147] D DSOUD_2528 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DSOUD_1649 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DSOUD_2977 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_1777 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DSOUD_1776 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DSOUD_3571 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DSOUD_0008 ppiA; cytosolic peptidylprolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D DSOUD_1285 alkyl hydroperoxide reductase subunit AhpC/peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D DSOUD_3377 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DSOUD_0183 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DSOUD_1708 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DSOUD_1631 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DSOUD_2850 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DSOUD_2864 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DSOUD_2047 hinT; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DSOUD_0953 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2009 long-chain acyl-CoA synthetase (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_0318 long-chain acyl-CoA synthetase [AMP-forming] K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DSOUD_2896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0415 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_0307 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DSOUD_1324 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DSOUD_2828 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DSOUD_1950 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DSOUD_0918 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DSOUD_0921 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DSOUD_1467 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DSOUD_0553 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DSOUD_2995 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D DSOUD_2063 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DSOUD_3163 hemB; delta-aminolevulinic acid dehydratase/porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DSOUD_3398 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_0015 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DSOUD_2963 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DSOUD_3055 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D DSOUD_2790 lpdA-1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DSOUD_1998 electron transfer flavoprotein alpha subunit apoprotein K03522 fixB; electron transfer flavoprotein alpha subunit D DSOUD_0306 electron transfer flavoprotein alpha subunit apoprotein K03522 fixB; electron transfer flavoprotein alpha subunit D DSOUD_2898 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DSOUD_1775 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:des02048] D DSOUD_3068 type I site-specific restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D DSOUD_1982 type I site-specific restriction endonuclease, part of a restriction-modification system K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D DSOUD_1602 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D DSOUD_3340 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DSOUD_1980 type I restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DSOUD_1600 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DSOUD_3343 type I restriction-modification system, DNA methylase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DSOUD_1978 type I restriction-modification system, DNA methylase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DSOUD_1599 type I restriction-modification system, DNA methylase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DSOUD_3066 type I restriction-modification system, DNA methylase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DSOUD_1865 hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D DSOUD_0880 site-specific DNA-adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DSOUD_2640 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_1563 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_0532 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DSOUD_3105 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D DSOUD_2891 DNA topoisomerase K07448 mrr; restriction system protein D DSOUD_0707 mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D DSOUD_0706 antitoxin component of the MazEF toxin-antitoxin module K07172 mazE; antitoxin MazE D DSOUD_2257 AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF D DSOUD_0674 addiction module toxin RelE K06218 relE; mRNA interferase RelE/StbE D DSOUD_0537 mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system K06218 relE; mRNA interferase RelE/StbE D DSOUD_0538 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D DSOUD_0539 prevent-host-death family protein K18923 stbD; antitoxin StbD D DSOUD_2879 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DSOUD_1495 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DSOUD_2878 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DSOUD_2635 plasmid stabilization system protein ParE K19092 parE1_3_4; toxin ParE1/3/4 D DSOUD_1003 plasmid stabilization system protein ParE K19092 parE1_3_4; toxin ParE1/3/4 D DSOUD_2250 plasmid stabilization protein K07334 higB-1; toxin HigB-1 D DSOUD_1000 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D DSOUD_2286 hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin D DSOUD_2285 putative zinc finger/helix-turn-helix protein, YgiT family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D DSOUD_2918 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DSOUD_1044 putative actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D DSOUD_1104 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DSOUD_1804 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DSOUD_2209 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:des01504] D DSOUD_2595 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2499 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_0897 acrA; RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DSOUD_2594 Multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_2500 multidrug efflux pump subunit AcrB K18138 acrB; multidrug efflux pump D DSOUD_0898 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D DSOUD_0899 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D DSOUD_0353 RND family efflux transporter, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D DSOUD_2605 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2910 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2135 outer membrane protein TolC K12340 tolC; outer membrane protein D DSOUD_2501 RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system D DSOUD_0509 efflux pump, outer membrane protein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:des03100] D DSOUD_2720 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_3345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_2726 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_1098 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DSOUD_0290 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_1949 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_2428 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_0124 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_2432 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DSOUD_3464 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DSOUD_2418 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DSOUD_2420 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DSOUD_1801 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DSOUD_1823 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DSOUD_2679 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DSOUD_1824 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DSOUD_3402 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DSOUD_1837 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_0759 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_1789 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_2866 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DSOUD_2427 tRNA-His K14226 tRNA-His; tRNA His D DSOUD_2617 tRNA-His K14226 tRNA-His; tRNA His D DSOUD_2721 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DSOUD_2727 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DSOUD_2133 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_2426 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_1050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_1773 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_2011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DSOUD_3401 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DSOUD_3225 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_3184 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_2802 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_2803 tRNA-Met K14230 tRNA-Met; tRNA Met D DSOUD_0012 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DSOUD_2429 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DSOUD_0473 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DSOUD_1891 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DSOUD_0288 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DSOUD_0292 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DSOUD_0287 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DSOUD_2651 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DSOUD_2865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DSOUD_2868 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DSOUD_2862 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DSOUD_2867 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DSOUD_1965 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_3472 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_2419 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_1983 tRNA-Val K14237 tRNA-Val; tRNA Val D DSOUD_2877 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D DSOUD_2722 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DSOUD_2728 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DSOUD_2718 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DSOUD_2724 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DSOUD_2717 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DSOUD_2723 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DSOUD_0293 bacterial large signal recognition particle RNA K01983 ffs; SRP RNA D DSOUD_3181 bacterial RNase P class A K01978 rnpB; M1 RNA D DSOUD_1595 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D DSOUD_2643 hpnA; nucleoside-diphosphate-sugar epimerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D DSOUD_1896 iorA; indolepyruvate:ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D DSOUD_1895 iorB; indolepyruvate:ferredoxin oxidoreductase, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D DSOUD_0227 aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DSOUD_0228 aerobic-type carbon monoxide dehydrogenase, large subunit, CoxS/CutS family K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DSOUD_0965 roo; flavorubredoxin K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D DSOUD_0812 NADPH:quinone reductase/Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DSOUD_0376 NADPH:quinone reductase/Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DSOUD_1013 putative NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DSOUD_1872 trxB-2; thioredoxin reductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D DSOUD_2637 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D DSOUD_0808 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D DSOUD_1511 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D DSOUD_2534 macA; cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D DSOUD_0544 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D DSOUD_1166 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D DSOUD_3080 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D DSOUD_2911 prx-1; thioredoxin peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DSOUD_2785 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DSOUD_3129 redox-sensitive bicupin YhaK, pirin superfamily K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D DSOUD_2430 redox-sensitive bicupin YhaK, pirin superfamily K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D DSOUD_0985 desulfoferredoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D DSOUD_0362 desulfoferredoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D DSOUD_0195 lpdA-2; dihydrolipoamide dehydrogenase K00520 merA; mercuric reductase [EC:1.16.1.1] D DSOUD_0608 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D DSOUD_3332 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D DSOUD_0645 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D DSOUD_1109 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D DSOUD_1136 ehrA-2; Ech hydrogenase-like complex, NuoL-like integral membrane lipoprotein subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D DSOUD_1137 ehrA-1; Ech hydrogenase-like complex, NuoL-like integral membrane lipoprotein subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D DSOUD_1134 ehrC; Ech hydrogenase-like complex, HyfE-like integral membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D DSOUD_1133 ehrD; Ech hydrogenase-like complex, HyfF-like integral membrane subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D DSOUD_1955 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D DSOUD_0272 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D DSOUD_2474 23S rRNA G2445 N2-methyltransferase RlmL K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D DSOUD_1516 radical SAM protein/putative methyltransferase K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-] D DSOUD_1245 radical SAM protein K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-] D DSOUD_0669 putative carbamoyl transferase, NodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D DSOUD_2507 beta-lysine acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264] D DSOUD_1655 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D DSOUD_1414 putative N-acetyltransferase YhbS K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D DSOUD_2477 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D DSOUD_3455 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D DSOUD_0093 arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D DSOUD_2646 3-oxoacyl-[acyl-carrier-protein] synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D DSOUD_2357 glycoside hydrolase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D DSOUD_2576 draT; dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] D DSOUD_0379 citG; 2'-(5''-triphosphoribosyl)-3'-dephospho-coenzyme A synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D DSOUD_0940 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyl ate carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D DSOUD_1389 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D DSOUD_3546 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D DSOUD_3294 dolichol kinase K18678 VTE5; phytol kinase [EC:2.7.1.182] D DSOUD_3145 phosphate kinase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D DSOUD_0584 glnE; glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D DSOUD_0383 malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D DSOUD_2798 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D DSOUD_3296 pyruvate phosphate dikinase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D DSOUD_1304 hprK; aldolase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D DSOUD_0955 esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D DSOUD_3236 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D DSOUD_1984 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DSOUD_1227 acyl-CoA thioesterase FadM K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DSOUD_0777 acyl-CoA thioesterase FadM K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DSOUD_2289 Tyrosine-protein phosphatase YwqE K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D DSOUD_2773 phosphotransferase enzyme family K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D DSOUD_2292 putative metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D DSOUD_1651 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D DSOUD_3287 endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D DSOUD_1943 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DSOUD_0347 Tat protein secretion system quality control protein TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DSOUD_0768 endonuclease YncB, thermonuclease family K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D DSOUD_2575 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24] D DSOUD_2656 def-2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DSOUD_3439 def-1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DSOUD_1694 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D DSOUD_1636 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D DSOUD_0145 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D DSOUD_3453 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D DSOUD_2340 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D DSOUD_0393 biotin-independent malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D DSOUD_0392 biotin-independent malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D DSOUD_2645 pimeloyl-ACP methyl ester carboxylesterase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114] D DSOUD_2793 yjeF; ATP-binding protein YjeF K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D DSOUD_0766 potassium ABC transporter ATPase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D DSOUD_0939 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D DSOUD_0302 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D DSOUD_3292 acyl-CoA synthetase, AMP-forming K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D DSOUD_2644 peptide synthase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D DSOUD_0384 AMP-binding enzyme K20415 madH; ACP-SH:acetate ligase [EC:6.2.1.35] D DSOUD_0251 rnfD; electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D DSOUD_0250 rnfC; electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D DSOUD_0249 rnfB; electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D DSOUD_2318 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D DSOUD_0474 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D DSOUD_2492 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D DSOUD_1825 histone deacetylase K04768 acuC; acetoin utilization protein AcuC D DSOUD_0416 L-lactate utilization protein LutC K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D DSOUD_1086 fdhD-2; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D DSOUD_0542 fdhD-1; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D DSOUD_3136 frx; ferredoxin K05337 fer; ferredoxin D DSOUD_2173 Ferredoxin K05337 fer; ferredoxin D DSOUD_0252 rnfG; electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D DSOUD_0253 rnfE; electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D DSOUD_0248 rnfA; electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D DSOUD_2208 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins D DSOUD_2521 NifU-like protein involved in Fe-S cluster formation K15790 nifQ; nitrogen fixation protein NifQ D DSOUD_2559 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX D DSOUD_2556 radical SAM superfamily protein K02585 nifB; nitrogen fixation protein NifB D DSOUD_2520 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D DSOUD_2519 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D DSOUD_0171 putative MnhB-like membrane protein K14113 ehbD; energy-converting hydrogenase B subunit D D DSOUD_2378 periplasmic nitrate reductase subunit NapG K02573 napG; ferredoxin-type protein NapG D DSOUD_2377 ferredoxin-type protein, NapH/MauN family K02574 napH; ferredoxin-type protein NapH D DSOUD_3374 FeS-binding protein K02574 napH; ferredoxin-type protein NapH D DSOUD_1999 electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D DSOUD_0305 etfB; electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D DSOUD_2522 hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN D DSOUD_3521 flavin-binding protein dodecin K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D DSOUD_1464 cysZ; putative sulfate transporter CysZ K06203 cysZ; CysZ protein D DSOUD_0724 yggS; pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D DSOUD_2058 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D DSOUD_2713 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D DSOUD_1813 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D DSOUD_0595 mobA_mobB; bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D DSOUD_3131 putative membrane protein YphA, DoxX/SURF4 family K15977 K15977; putative oxidoreductase D DSOUD_0072 putative membrane protein YphA, DoxX/SURF4 family K15977 K15977; putative oxidoreductase D DSOUD_0975 methylamine utilization protein MauE K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D DSOUD_2586 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D DSOUD_3016 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D DSOUD_3396 cold shock DNA-binding protein K03704 cspA; cold shock protein D DSOUD_3397 cold shock DNA-binding protein K03704 cspA; cold shock protein D DSOUD_2754 cold shock protein K03704 cspA; cold shock protein D DSOUD_3504 cold shock DNA-binding protein K03704 cspA; cold shock protein D DSOUD_0448 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D DSOUD_1161 tex; transcriptional accessory protein Tex/SPT6 K06959 tex; protein Tex C 99974 Translation D DSOUD_0689 RNA procession exonuclease K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D DSOUD_2479 ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D DSOUD_2425 tig; trigger factor K03545 tig; trigger factor D DSOUD_0543 fdhE; formate dehydrogenase maturation protein FdhE K02380 fdhE; FdhE protein D DSOUD_1594 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D DSOUD_3315 hypC; hydrogenase maturation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D DSOUD_3316 hypD; hydrogenase maturation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D DSOUD_3317 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D DSOUD_2305 hypF; hydrogenase maturation protein, carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D DSOUD_0160 comM; Mg chelatase-like protein/competence ATPase ComM K07391 comM; magnesium chelatase family protein D DSOUD_2960 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D DSOUD_2511 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D DSOUD_0745 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D DSOUD_0229 dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor D DSOUD_1249 nfeD; nodulation efficiency protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D DSOUD_3526 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC D DSOUD_0488 nth; endonuclease III-like protein K07457 K07457; endonuclease III related protein D DSOUD_2939 hypothetical protein K07460 yraN; putative endonuclease D DSOUD_1507 putative endonuclease, GIY-YIG superfamily K07461 K07461; putative endonuclease D DSOUD_0730 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein D DSOUD_1111 rarA; replication-associated recombination protein RarA/DNA-dependent ATPase K07478 ycaJ; putative ATPase D DSOUD_2129 transposase K07481 K07481; transposase, IS5 family D DSOUD_2638 transposase K07482 K07482; transposase, IS30 family D DSOUD_2081 transposase K07482 K07482; transposase, IS30 family D DSOUD_3341 transposase K07483 K07483; transposase D DSOUD_2766 transposase K07483 K07483; transposase D DSOUD_3483 transposase K07483 K07483; transposase D DSOUD_1316 transposase K07483 K07483; transposase D DSOUD_2272 transposase K07483 K07483; transposase D DSOUD_0672 transposase K07485 K07485; transposase D DSOUD_1446 transposase K07486 K07486; transposase D DSOUD_3432 transposase K07486 K07486; transposase D DSOUD_3537 transposase K07486 K07486; transposase D DSOUD_2015 transposase K07486 K07486; transposase D DSOUD_1444 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D DSOUD_3440 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D DSOUD_2758 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D DSOUD_1152 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D DSOUD_2261 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D DSOUD_0994 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D DSOUD_0996 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D DSOUD_0997 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D DSOUD_2277 transposase K07493 K07493; putative transposase D DSOUD_3342 transposase K07497 K07497; putative transposase D DSOUD_2765 transposase K07497 K07497; putative transposase D DSOUD_3484 transposase K07497 K07497; putative transposase D DSOUD_1317 transposase K07497 K07497; putative transposase D DSOUD_2271 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D DSOUD_0295 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D DSOUD_0716 hypothetical protein K03293 TC.AAT; amino acid transporter, AAT family D DSOUD_2972 Multidrug efflux pump subunit AcrB K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D DSOUD_0723 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D DSOUD_0966 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D DSOUD_2541 putative membrane protein YbjL, putative transporter K07085 K07085; putative transport protein C 99978 Cell growth D DSOUD_0904 scdA; iron-sulfur cluster repair di-iron protein ScdA K07322 ytfE; regulator of cell morphogenesis and NO signaling D DSOUD_2402 peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility D DSOUD_0299 mglA; signal recognition particle receptor subunit beta/cell polarity determinant GTPase MglA K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D DSOUD_1625 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D DSOUD_1650 phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D DSOUD_1582 ribonuclease K07175 phoH2; PhoH-like ATPase D DSOUD_2613 signal transduction protein K07182 K07182; CBS domain-containing protein D DSOUD_2745 cyclic nucleotide-binding signal transduction protein K07182 K07182; CBS domain-containing protein D DSOUD_2749 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein D DSOUD_2689 SH3 domain protein K07184 ygiM; SH3 domain protein D DSOUD_3548 yajQ; putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D DSOUD_3549 outer membrane lipoprotein-sorting protein K03634 lolA; outer membrane lipoprotein carrier protein D DSOUD_1664 periplasmic chaperone for outer membrane proteins Skp K06142 hlpA; outer membrane protein D DSOUD_1953 LysM domain-containing zinc metalloendopeptidase M23 family K06194 nlpD; lipoprotein NlpD D DSOUD_1165 putative salt-induced outer membrane protein YdiY K07283 ydiY; putative salt-induced outer membrane protein D DSOUD_1745 starvation-inducible outer membrane lipoprotein K07285 slp; outer membrane lipoprotein D DSOUD_0799 starvation-inducible outer membrane lipoprotein K07285 slp; outer membrane lipoprotein D DSOUD_1735 hypothetical protein K07289 asmA; AsmA protein D DSOUD_2184 membrane protein implicated in regulation of membrane protease activity K07340 ybbJ; inner membrane protein D DSOUD_2591 Multidrug resistance efflux pump K01993 ABC-2.TX; HlyD family secretion protein D DSOUD_2604 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D DSOUD_1969 putative PurR-regulated permease PerM K11744 tqsA; AI-2 transport protein TqsA D DSOUD_3312 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D DSOUD_0065 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D DSOUD_0273 hemerythrin K07216 hr; hemerythrin D DSOUD_1862 copper resistance protein B precursor K07233 pcoB; copper resistance protein B D DSOUD_1515 copper resistance protein B precursor K07233 pcoB; copper resistance protein B D DSOUD_3369 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D DSOUD_3188 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D DSOUD_2043 putative FlgJ-like protein K03796 bax; Bax protein D DSOUD_0452 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D DSOUD_0505 histidinol phosphatase K04477 ycdX; putative hydrolase D DSOUD_1577 coenzyme PQQ biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D DSOUD_2711 putative phospholipase, patatin family K07001 K07001; NTE family protein D DSOUD_3514 patatin-like phospholipase K07001 K07001; NTE family protein D DSOUD_1315 putative acylesterase/phospholipase RssA K07001 K07001; NTE family protein D DSOUD_0050 patatin-like phospholipase K07001 K07001; NTE family protein D DSOUD_3152 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D DSOUD_2294 tRNA-processing RNAse BN K07058 K07058; membrane protein D DSOUD_2126 hypothetical protein K07058 K07058; membrane protein D DSOUD_2372 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D DSOUD_2485 hypothetical protein K03744 lemA; LemA protein D DSOUD_3529 hypothetical protein K03744 lemA; LemA protein D DSOUD_0729 hypothetical protein K03747 smg; Smg protein D DSOUD_0064 hypothetical protein K05805 creA; CreA protein D DSOUD_2804 hypothetical protein K03749 dedD; DedD protein D DSOUD_0453 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D DSOUD_0454 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D DSOUD_2777 hypothetical protein K08972 K08972; putative membrane protein D DSOUD_0136 putative membrane protein YjdF K08984 yjdF; putative membrane protein D DSOUD_2487 putative membrane protein K08988 K08988; putative membrane protein D DSOUD_1402 hypothetical protein K09858 K09858; SEC-C motif domain protein D DSOUD_1533 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D DSOUD_2486 hypothetical protein K06872 K06872; uncharacterized protein D DSOUD_2461 BioD-like N-terminal domain of phosphotransacetylase K06873 K06873; uncharacterized protein D DSOUD_1453 yyaL; thioredoxin domain-containing protein YyaL K06888 K06888; uncharacterized protein D DSOUD_2647 membrane protein K06890 K06890; uncharacterized protein D DSOUD_2588 putative ATPase, AAA+ superfamily K06923 K06923; uncharacterized protein D DSOUD_3534 putative ATPase, AAA+ superfamily K06923 K06923; uncharacterized protein D DSOUD_1828 putative CoA-binding protein K06929 K06929; uncharacterized protein D DSOUD_3416 putative CoA-binding protein K06929 K06929; uncharacterized protein D DSOUD_1179 hypothetical protein K06940 K06940; uncharacterized protein D DSOUD_2297 iron-sulfur cluster-binding oxidoreductase K06940 K06940; uncharacterized protein D DSOUD_3449 hypothetical protein K06950 K06950; uncharacterized protein D DSOUD_2179 phosphohydrolase K06950 K06950; uncharacterized protein D DSOUD_2946 RNA-binding protein K06960 K06960; uncharacterized protein D DSOUD_0817 putative SAM-dependent methyltransferase K06983 K06983; uncharacterized protein D DSOUD_1224 putative exporter K07003 K07003; uncharacterized protein D DSOUD_2633 MFS transporter K07005 K07005; uncharacterized protein D DSOUD_3140 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D DSOUD_1395 putative kinase K07028 K07028; uncharacterized protein D DSOUD_3076 succinate-acetate transporter protein K07034 K07034; uncharacterized protein D DSOUD_3300 amidohydrolase K07045 K07045; uncharacterized protein D DSOUD_0754 hypothetical protein K07063 K07063; uncharacterized protein D DSOUD_2895 putative Zn-ribbon domain-containing OB-fold protein K07068 K07068; uncharacterized protein D DSOUD_1607 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D DSOUD_2260 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D DSOUD_2265 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D DSOUD_0709 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D DSOUD_1561 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D DSOUD_3124 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D DSOUD_1157 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D DSOUD_2992 hypothetical protein K07089 K07089; uncharacterized protein D DSOUD_3323 putative permease K07089 K07089; uncharacterized protein D DSOUD_1025 putative permease K07089 K07089; uncharacterized protein D DSOUD_1549 permease K07089 K07089; uncharacterized protein D DSOUD_0714 permease K07089 K07089; uncharacterized protein D DSOUD_1802 putative membrane protein YfcA K07090 K07090; uncharacterized protein D DSOUD_0345 putative membrane protein YfcA K07090 K07090; uncharacterized protein D DSOUD_0377 putative membrane protein YfcA K07090 K07090; uncharacterized protein D DSOUD_2060 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D DSOUD_1008 putative phosphohydrolase, MPP superfamily K07098 K07098; uncharacterized protein D DSOUD_1576 putative selenium metabolism protein, YedE family K07112 K07112; uncharacterized protein D DSOUD_0330 sulfur transport protein K07112 K07112; uncharacterized protein D DSOUD_1856 hypothetical protein K07126 K07126; uncharacterized protein D DSOUD_2570 radical SAM domain iron-sulfur cluster-binding oxidoreductase K07129 K07129; uncharacterized protein D DSOUD_1205 putative FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein D DSOUD_0746 putative Fe-S center protein K07138 K07138; uncharacterized protein D DSOUD_3097 yhcC; radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase K07139 K07139; uncharacterized protein D DSOUD_3182 hypothetical protein K07164 K07164; uncharacterized protein D DSOUD_3189 yqeY; glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D DSOUD_2464 hypothetical protein K09131 K09131; uncharacterized protein D DSOUD_0137 hypothetical protein K09131 K09131; uncharacterized protein D DSOUD_0513 hypothetical protein K09132 K09132; uncharacterized protein D DSOUD_2337 PII-like signaling protein K09137 K09137; uncharacterized protein D DSOUD_1622 hypothetical protein K09141 K09141; uncharacterized protein D DSOUD_1769 putative lipoic acid-binding regulatory protein K09158 K09158; uncharacterized protein D DSOUD_1722 hypothetical protein K09160 K09160; uncharacterized protein D DSOUD_2201 hypothetical protein K09160 K09160; uncharacterized protein D DSOUD_3437 hypothetical protein K09729 K09729; uncharacterized protein D DSOUD_1761 hypothetical protein K09764 K09764; uncharacterized protein D DSOUD_0061 hypothetical protein K09768 K09768; uncharacterized protein D DSOUD_2187 hypothetical protein K09780 K09780; uncharacterized protein D DSOUD_0890 hypothetical protein K09790 K09790; uncharacterized protein D DSOUD_1673 hypothetical protein K09791 K09791; uncharacterized protein D DSOUD_2321 hypothetical protein K09792 K09792; uncharacterized protein D DSOUD_1445 hypothetical protein K09793 K09793; uncharacterized protein D DSOUD_1338 hypothetical protein K09794 K09794; uncharacterized protein D DSOUD_2400 hypothetical protein K09798 K09798; uncharacterized protein D DSOUD_1036 hypothetical protein K09803 K09803; uncharacterized protein D DSOUD_0760 putative S1 domain-containing RNA-binding protein, virulence factor B family K00243 K00243; uncharacterized protein D DSOUD_0451 putative lipoprotein YmbA K09857 K09857; uncharacterized protein D DSOUD_1838 hypothetical protein K09862 K09862; uncharacterized protein D DSOUD_0816 hypothetical protein K09898 K09898; uncharacterized protein D DSOUD_3473 hypothetical protein K09915 K09915; uncharacterized protein D DSOUD_1584 hypothetical protein K09928 K09928; uncharacterized protein D DSOUD_3568 hypothetical protein K09931 K09931; uncharacterized protein D DSOUD_0906 hypothetical protein K09946 K09946; uncharacterized protein D DSOUD_0911 hypothetical protein K09946 K09946; uncharacterized protein D DSOUD_0635 hypothetical protein K09954 K09954; uncharacterized protein D DSOUD_1646 hypothetical protein K09981 K09981; uncharacterized protein D DSOUD_3171 exonuclease K07502 yprB; uncharacterized protein D DSOUD_1674 hypothetical protein K07276 K07276; uncharacterized protein D DSOUD_1677 hypothetical protein K07276 K07276; uncharacterized protein D DSOUD_1759 ylxRQ; 50S ribosomal protein L7AE K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024