+D GENES KO
#
KEGG Orthology (KO) - Dehalococcoides mccartyi VS
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dev00010]
D DhcVS_49 nagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DhcVS_450 pgi; glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D DhcVS_1128 carbohydrate kinase, PfkB family K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DhcVS_1007 fbp; fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DhcVS_649 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DhcVS_531 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DhcVS_651 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DhcVS_650 phophosphoglycerate mutase AP superfamily K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DhcVS_1517 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DhcVS_533 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DhcVS_494 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00020 Citrate cycle (TCA cycle) [PATH:dev00020]
D DhcVS_1496 2-isopropylmalate/homocitrate/Re-citrate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D DhcVS_392 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D DhcVS_395 ttdB; tartrate/fumarate hydratase family, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D DhcVS_396 ttdA; tartrate/fumarate hydratase family, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DhcVS_129 hypothetical protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DhcVS_128 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:dev00030]
D DhcVS_450 pgi; glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D DhcVS_582 ribulose-phosphate 3-epimerase-like protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DhcVS_584 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DhcVS_1190 transaldolase-like protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DhcVS_583 rpiB; ribose-5-phosphate isomerase-like protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DhcVS_618 sugar kinase ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D DhcVS_377 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DhcVS_1007 fbp; fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DhcVS_1128 carbohydrate kinase, PfkB family K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:dev00040]
D DhcVS_642 oxidoreductase, short chain dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D DhcVS_582 ribulose-phosphate 3-epimerase-like protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DhcVS_132 adh2; alcohol dehydrogenase, zinc-containing K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D DhcVS_1523 aldolase, class II K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:dev00051]
D DhcVS_450 pgi; glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D DhcVS_451 manB1; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DhcVS_991 nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DhcVS_1523 aldolase, class II K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D DhcVS_1144 HAD-superfamily hydrolase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D DhcVS_1128 carbohydrate kinase, PfkB family K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DhcVS_132 adh2; alcohol dehydrogenase, zinc-containing K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D DhcVS_1007 fbp; fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DhcVS_649 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DhcVS_583 rpiB; ribose-5-phosphate isomerase-like protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:dev00052]
D DhcVS_49 nagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DhcVS_1128 carbohydrate kinase, PfkB family K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DhcVS_1127 tagatose 1,6-diphosphate aldolase-like protein K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:dev00500]
D DhcVS_49 nagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DhcVS_450 pgi; glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dev00520]
D DhcVS_472 glmS; glucosamine-fructose-6-phosphateaminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DhcVS_469 manB2; phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DhcVS_470 nucleoside-diphosphate-sugar pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DhcVS_49 nagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DhcVS_450 pgi; glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D DhcVS_451 manB1; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DhcVS_991 nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:dev00620]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DhcVS_899 acylphosphatase-like protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DhcVS_691 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DhcVS_129 hypothetical protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DhcVS_128 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DhcVS_395 ttdB; tartrate/fumarate hydratase family, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D DhcVS_396 ttdA; tartrate/fumarate hydratase family, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DhcVS_494 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DhcVS_729 leuA1; isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DhcVS_734 leuA2; isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dev00630]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DhcVS_941 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1369 glutamate synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_378 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DhcVS_176 mpxA2; molybdopterin oxidoreductase, formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DhcVS_122 Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DhcVS_581 cyclase K07130 kynB; arylformamidase [EC:3.5.1.9]
D DhcVS_1023 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:dev00640]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DhcVS_145 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D DhcVS_1454 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:dev00650]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DhcVS_737 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DhcVS_736 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:dev00660]
D DhcVS_737 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DhcVS_736 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DhcVS_732 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_390 aconitase/homoaconitase/3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_731 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_391 aconitase/homoaconitase C-terminal domain protein, 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:dev00562]
D DhcVS_852 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D DhcVS_649 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dev00190]
D DhcVS_794 nuoA; NADH:quinone oxidoreductase subunit 3 (chain A) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DhcVS_795 nuoB; NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DhcVS_796 nuoC; NADH:quinone oxidoreductase 27 kD subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D DhcVS_797 nuoD; NADH:quinone oxidoreductase 49 kD subunit 7 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D DhcVS_766 echG; hydrogenase subunit, NADH dehydrogenase subunit F subfamily K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DhcVS_634 hymA2; [Fe] hydrogenase, HymA subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DhcVS_153 hymA1; [Fe] hydrogenase, HymA subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DhcVS_388 HymA and NuoE type iron-sulfur cluster protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DhcVS_767 echH; hydrogenase subunit, NADH dehydrogenase subunit E subfamily K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DhcVS_635 hymB2; [Fe] hydrogenase, HymB subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DhcVS_154 hymB1; [Fe] hydrogenase, HymB subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DhcVS_155 hymC1; [Fe] hydrogenase, Hym C subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D DhcVS_798 nuoH; NADH:quinone oxidoreductase subunit 1 (chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DhcVS_800 nuoJ; NADH:quinone oxidoreductase subunit 6 (chain J) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DhcVS_802 nuoL; NADH:quinone oxidoreductase subunit 5 (chain L) K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DhcVS_803 nuoM; NADH:quinone oxidoreductase subunit 4 (chain M) K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DhcVS_804 nuoN; NADH:quinone oxidoreductase subunit 2 (chain N) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DhcVS_801 nuoK; NADH:quinone oxidoreductase subunit 11 or 4L (chain K) K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D DhcVS_799 nuoI; NADH:quinone oxidoreductase subunit 1 (chain I) K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DhcVS_768 echI; hydrogenase subunit, ferredoxin-like protein K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D DhcVS_636 hymC2; [Fe] hydrogenase, HymC subunit K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D DhcVS_501 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DhcVS_503 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DhcVS_502 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DhcVS_500 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DhcVS_504 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DhcVS_497 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DhcVS_499 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DhcVS_498 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DhcVS_311 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:dev00710]
D DhcVS_651 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DhcVS_531 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DhcVS_584 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DhcVS_583 rpiB; ribose-5-phosphate isomerase-like protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DhcVS_649 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DhcVS_582 ribulose-phosphate 3-epimerase-like protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DhcVS_1190 transaldolase-like protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:dev00720]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DhcVS_494 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DhcVS_129 hypothetical protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DhcVS_128 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DhcVS_395 ttdB; tartrate/fumarate hydratase family, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D DhcVS_396 ttdA; tartrate/fumarate hydratase family, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DhcVS_131 pyridine nucleotide-disulphide oxidoreductase protein K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D DhcVS_609 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DhcVS_606 folD; methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DhcVS_951 iron-sulfur cluster domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D DhcVS_604 cdhC; carbon monoxide dehydrogenase, alpha subunit K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D DhcVS_603 cdhE; carbon-monoxide dehydrogenase, corrinoid/iron-sulfur protein, gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D DhcVS_605 cdhD; carbon-monoxide dehydrogenase delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:dev00680]
D DhcVS_176 mpxA2; molybdopterin oxidoreductase, formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DhcVS_122 Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DhcVS_131 pyridine nucleotide-disulphide oxidoreductase protein K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D DhcVS_603 cdhE; carbon-monoxide dehydrogenase, corrinoid/iron-sulfur protein, gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D DhcVS_605 cdhD; carbon-monoxide dehydrogenase delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D DhcVS_951 iron-sulfur cluster domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D DhcVS_378 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DhcVS_533 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DhcVS_1007 fbp; fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DhcVS_1128 carbohydrate kinase, PfkB family K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DhcVS_554 hydrogenase maturation protease K00442 frhD; coenzyme F420 hydrogenase subunit delta
D DhcVS_553 vhuA; nickel-dependent hydrogenase, group 3, large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5]
D DhcVS_552 vhuG; nickel-dependent hydrogenase, group 3, small subunit K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DhcVS_494 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DhcVS_650 phophosphoglycerate mutase AP superfamily K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DhcVS_1517 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DhcVS_539 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:dev00910]
D DhcVS_941 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1369 glutamate synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_36 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DhcVS_937 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:dev00920]
D DhcVS_1472 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DhcVS_953 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dev00061]
D DhcVS_1062 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DhcVS_1059 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DhcVS_836 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DhcVS_1060 fabG; 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DhcVS_1055 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DhcVS_904 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_817 AMP-binding protein, long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D DhcVS_904 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_817 AMP-binding protein, long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:dev00074]
D DhcVS_387 acpS; holo-(acyl-carrier protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DhcVS_1062 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DhcVS_1059 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dev00561]
D DhcVS_484 plsX; fatty acid/phospholipid biosynthesis enzyme K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DhcVS_8 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1226 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1493 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1178 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_838 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_157 pldB; hydrolase, alpha/beta fold family K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
C 00564 Glycerophospholipid metabolism [PATH:dev00564]
D DhcVS_1179 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DhcVS_8 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1226 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1493 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1178 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_838 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_316 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dev00230]
D DhcVS_398 MutT/nudix, ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DhcVS_377 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DhcVS_1196 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DhcVS_742 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DhcVS_619 phosphoribosylglycinamide transformylase, folate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DhcVS_322 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DhcVS_323 purL; phosphoribosylformylglycinamidine synthase II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D DhcVS_1197 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DhcVS_743 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DhcVS_745 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DhcVS_744 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DhcVS_1199 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DhcVS_703 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DhcVS_698 hpt2; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DhcVS_655 hpt1; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DhcVS_328 IMP dehydrogenase protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DhcVS_336 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DhcVS_1008 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DhcVS_740 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DhcVS_33 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DhcVS_564 nrdJ2; ribonucleotide reductase, cobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_74 nrdJ1; ribonucleotide reductase, cobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_286 nrdA; ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_493 dgt; dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D DhcVS_5 spoT; relA/spoT protein, GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DhcVS_849 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DhcVS_697 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D DhcVS_1491 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DhcVS_437 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DhcVS_1519 mazG; tetrapyrrole methylase / MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DhcVS_1497 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:dev00240]
D DhcVS_985 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DhcVS_984 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DhcVS_982 pyrB; aspartate carbamoyltransferase, catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DhcVS_983 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DhcVS_1153 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D DhcVS_986 oxidoreductase FAD/NAD(P)-binding, dihydroorotate dehydrogenase-like protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D DhcVS_976 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DhcVS_12 pyrF; orotidine 5-prime-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DhcVS_319 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DhcVS_336 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DhcVS_1519 mazG; tetrapyrrole methylase / MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DhcVS_938 maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DhcVS_1191 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DhcVS_703 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DhcVS_981 pyrR; pyrimidine operon regulatory protein/uracilphosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DhcVS_1491 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DhcVS_564 nrdJ2; ribonucleotide reductase, cobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_74 nrdJ1; ribonucleotide reductase, cobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_286 nrdA; ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_356 comEB; cytidine/deoxycytidylate deaminase, Zn-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DhcVS_684 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DhcVS_358 dut; deoxyuridine 5-prime-triphosphate nucleotidohydrolase, dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DhcVS_723 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DhcVS_1265 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dev00250]
D DhcVS_1164 nadB; aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DhcVS_140 arcB; ornithine cyclodeaminase K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
D DhcVS_1043 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DhcVS_1044 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DhcVS_849 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DhcVS_744 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DhcVS_982 pyrB; aspartate carbamoyltransferase, catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DhcVS_36 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DhcVS_941 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1369 glutamate synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_985 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DhcVS_984 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DhcVS_322 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DhcVS_472 glmS; glucosamine-fructose-6-phosphateaminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DhcVS_1196 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dev00260]
D DhcVS_1515 aspK; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DhcVS_845 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DhcVS_989 metM; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DhcVS_988 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DhcVS_161 gly1; threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DhcVS_378 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DhcVS_650 phophosphoglycerate mutase AP superfamily K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DhcVS_1517 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DhcVS_539 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DhcVS_1258 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DhcVS_1257 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DhcVS_905 pyridoxal-phosphate dependent tryptophan synthase-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:dev00270]
D DhcVS_1472 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DhcVS_953 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DhcVS_453 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DhcVS_458 mtaP; methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D DhcVS_459 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D DhcVS_665 HAD-superfamily hydrolase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D DhcVS_257 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DhcVS_454 ahcY; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DhcVS_1515 aspK; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DhcVS_845 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DhcVS_989 metM; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DhcVS_792 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D DhcVS_791 iron-sulfur cluster-binding protein, ferredoxin-like protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D DhcVS_9 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DhcVS_393 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DhcVS_539 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:dev00280]
D DhcVS_9 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dev00290]
D DhcVS_732 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_390 aconitase/homoaconitase/3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_731 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_391 aconitase/homoaconitase C-terminal domain protein, 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DhcVS_730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DhcVS_737 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DhcVS_736 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DhcVS_735 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DhcVS_738 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DhcVS_9 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DhcVS_729 leuA1; isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DhcVS_734 leuA2; isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:dev00300]
D DhcVS_989 metM; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DhcVS_1515 aspK; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DhcVS_845 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DhcVS_846 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DhcVS_844 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DhcVS_1041 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DhcVS_647 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DhcVS_646 class I/II aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DhcVS_475 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00310 Lysine degradation
D DhcVS_197 ablAB; L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D DhcVS_569 lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:dev00220]
D DhcVS_1176 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DhcVS_1043 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DhcVS_1044 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DhcVS_322 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DhcVS_941 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1369 glutamate synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_985 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DhcVS_984 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DhcVS_399 acetyltransferase, GNAT family K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D DhcVS_1039 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DhcVS_1040 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DhcVS_1508 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DhcVS_1041 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:dev00330]
D DhcVS_181 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DhcVS_1065 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DhcVS_1071 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:dev00340]
D DhcVS_749 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DhcVS_1111 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D DhcVS_1113 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DhcVS_950 hisH; imidazole glycerol phosphate synthase,glutamineamidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DhcVS_833 hisF1; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DhcVS_947 hisF2; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DhcVS_746 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DhcVS_747 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_593 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_748 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism
D DhcVS_747 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_593 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:dev00360]
D DhcVS_886 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DhcVS_808 thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D DhcVS_747 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_593 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:dev00380]
D DhcVS_581 cyclase K07130 kynB; arylformamidase [EC:3.5.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dev00400]
D DhcVS_1256 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DhcVS_411 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DhcVS_343 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DhcVS_410 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DhcVS_409 aroD; 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D DhcVS_407 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DhcVS_406 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DhcVS_405 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DhcVS_1251 trpE; anthranilate/para-aminobenzoate synthass component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DhcVS_1252 trpG; anthranilate/para-aminobenzoate synthass component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DhcVS_133 trpD2; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DhcVS_1253 trpD1; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DhcVS_1255 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DhcVS_1254 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DhcVS_1258 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DhcVS_1257 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DhcVS_905 pyridoxal-phosphate dependent tryptophan synthase-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DhcVS_404 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D DhcVS_403 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DhcVS_1437 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D DhcVS_747 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_593 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:dev00410]
D DhcVS_706 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DhcVS_708 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D DhcVS_140 arcB; ornithine cyclodeaminase K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:dev00450]
D DhcVS_483 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DhcVS_331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D DhcVS_378 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dev00470]
D DhcVS_570 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DhcVS_322 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DhcVS_647 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DhcVS_475 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:dev00480]
D DhcVS_901 pepA; cytosol aminopeptidase/leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dev00541]
D DhcVS_471 nucleoside-diphosphate-sugar pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DhcVS_451 manB1; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DhcVS_470 nucleoside-diphosphate-sugar pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:dev00550]
D DhcVS_570 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DhcVS_317 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:dev00543]
D DhcVS_1472 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dev00730]
D DhcVS_681 thiC; thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DhcVS_70 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DhcVS_652 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DhcVS_688 ThiE-associated domain protein/thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DhcVS_340 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DhcVS_437 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:dev00740]
D DhcVS_971 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DhcVS_973 ribD; riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DhcVS_970 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DhcVS_972 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DhcVS_542 ribF; FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DhcVS_398 MutT/nudix, ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:dev00750]
D DhcVS_988 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DhcVS_324 snz; pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D DhcVS_538 SNO glutamine amidotransferase family K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dev00760]
D DhcVS_1164 nadB; aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DhcVS_1474 nadA; quinolinate synthetase complex, subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D DhcVS_1163 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DhcVS_1200 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DhcVS_703 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DhcVS_3 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DhcVS_1519 mazG; tetrapyrrole methylase / MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DhcVS_940 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D DhcVS_1074 competence/damage-inducible protein CinA C-terminal domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D DhcVS_400 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:dev00770]
D DhcVS_737 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DhcVS_736 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DhcVS_735 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DhcVS_738 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DhcVS_707 panB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DhcVS_708 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DhcVS_370 transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DhcVS_371 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DhcVS_1519 mazG; tetrapyrrole methylase / MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DhcVS_178 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DhcVS_1105 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DhcVS_387 acpS; holo-(acyl-carrier protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DhcVS_9 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DhcVS_706 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:dev00780]
D DhcVS_836 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DhcVS_1060 fabG; 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DhcVS_1055 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DhcVS_753 birA; biotin--acetyl-CoA-carboxylase ligase/BirA family transcriptional regulator K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:dev00790]
D DhcVS_987 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DhcVS_1486 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DhcVS_1485 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DhcVS_15 folC; folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DhcVS_971 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DhcVS_1487 6-pyruvoyl tetrahydrobiopterin synthase-like protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DhcVS_109 MobA protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:dev00670]
D DhcVS_609 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DhcVS_606 folD; methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DhcVS_378 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DhcVS_619 phosphoribosylglycinamide transformylase, folate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DhcVS_1199 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DhcVS_1524 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DhcVS_723 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DhcVS_1265 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D DhcVS_1023 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dev00860]
D DhcVS_1146 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DhcVS_78 tetrapyrrole methylase, precorrin-6Y C5,15-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D DhcVS_135 cbiA; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DhcVS_1006 cobA3; ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DhcVS_957 cobA2; ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DhcVS_73 cobA1; ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DhcVS_807 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DhcVS_592 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DhcVS_72 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DhcVS_956 cobD; cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DhcVS_591 CbiZ-like protein K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D DhcVS_598 cobU; cobinamide kinase/cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DhcVS_596 cobS; cobalamin 5-prime-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DhcVS_595 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DhcVS_597 gpmB; phosphoglycerate mutase family K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D DhcVS_826 bacterioferritin domain protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dev00130]
D DhcVS_341 ubiquinone/menaquinone biosynthesis methlytransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DhcVS_342 ubiquinone/menaquinone biosynthesis methlytransferase, methyltransferase type 12 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DhcVS_344 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DhcVS_1414 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dev00900]
D DhcVS_652 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DhcVS_315 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DhcVS_59 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D DhcVS_348 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, homoserine kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DhcVS_60 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D DhcVS_313 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphatesynthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DhcVS_1126 ispH; hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DhcVS_332 hepT; heptaprenyl diphosphate synthase component II K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DhcVS_317 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DhcVS_584 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D DhcVS_471 nucleoside-diphosphate-sugar pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:dev00332]
D DhcVS_1065 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DhcVS_1071 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:dev00261]
D DhcVS_1515 aspK; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DhcVS_845 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DhcVS_846 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DhcVS_844 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:dev00521]
D DhcVS_49 nagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DhcVS_852 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D DhcVS_471 nucleoside-diphosphate-sugar pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DhcVS_49 nagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D DhcVS_471 nucleoside-diphosphate-sugar pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:dev00401]
D DhcVS_403 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DhcVS_747 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_593 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DhcVS_1251 trpE; anthranilate/para-aminobenzoate synthass component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DhcVS_1252 trpG; anthranilate/para-aminobenzoate synthass component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DhcVS_1059 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DhcVS_1060 fabG; 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DhcVS_1055 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DhcVS_1062 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D DhcVS_453 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D DhcVS_899 acylphosphatase-like protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:dev00633]
D DhcVS_121 hupS; Ni/Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D DhcVS_951 iron-sulfur cluster domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D DhcVS_632 porA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DhcVS_633 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DhcVS_630 porG; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DhcVS_631 porD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dev03020]
D DhcVS_543 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DhcVS_444 rpoA; DNA-directed RNA polymerase alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dev03010]
D DhcVS_321 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DhcVS_423 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DhcVS_443 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DhcVS_433 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DhcVS_917 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DhcVS_414 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DhcVS_430 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DhcVS_448 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DhcVS_416 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DhcVS_442 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DhcVS_413 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DhcVS_441 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DhcVS_842 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DhcVS_507 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DhcVS_426 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DhcVS_915 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DhcVS_421 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DhcVS_1521 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DhcVS_290 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DhcVS_864 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DhcVS_420 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DhcVS_417 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DhcVS_418 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DhcVS_429 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DhcVS_431 rplF; ribosomal protein L6P/L9E K02933 RP-L6; large subunit ribosomal protein L6
D DhcVS_862 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DhcVS_482 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DhcVS_863 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DhcVS_865 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DhcVS_447 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DhcVS_427 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DhcVS_435 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DhcVS_424 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DhcVS_445 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DhcVS_432 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DhcVS_279 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DhcVS_656 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DhcVS_1107 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DhcVS_422 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DhcVS_419 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DhcVS_428 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DhcVS_1232 rpiY; ribosomal protein L25 (general stress protein Ctc) K02897 RP-L25; large subunit ribosomal protein L25
D DhcVS_1108 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DhcVS_1045 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DhcVS_425 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DhcVS_434 rpmD; ribosomal protein L30/L7E K02907 RP-L30; large subunit ribosomal protein L30
D DhcVS_1109 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DhcVS_1058 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DhcVS_868 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DhcVS_914 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DhcVS_657 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DhcVS_893 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DhcVS_54 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DhcVS_55 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dev00970]
D DhcVS_62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DhcVS_1441 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DhcVS_265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DhcVS_654 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_830 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_1247 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_1462 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_629 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_714 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DhcVS_918 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DhcVS_1223 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DhcVS_713 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DhcVS_896 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DhcVS_895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DhcVS_1507 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DhcVS_1222 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DhcVS_757 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DhcVS_639 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DhcVS_831 tRNA-His K14226 tRNA-His; tRNA His
D DhcVS_892 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DhcVS_712 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_1225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_1246 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_662 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_1221 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_778 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DhcVS_722 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DhcVS_364 tRNA-Met K14230 tRNA-Met; tRNA Met
D DhcVS_1097 tRNA-Met K14230 tRNA-Met; tRNA Met
D DhcVS_641 tRNA-Met K14230 tRNA-Met; tRNA Met
D DhcVS_711 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DhcVS_667 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DhcVS_1518 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DhcVS_637 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DhcVS_626 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_513 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_627 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_1169 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_870 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DhcVS_872 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DhcVS_326 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DhcVS_1220 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DhcVS_871 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DhcVS_966 tRNA-Val K14237 tRNA-Val; tRNA Val
D DhcVS_1248 tRNA-Val K14237 tRNA-Val; tRNA Val
D DhcVS_163 tRNA-Val K14237 tRNA-Val; tRNA Val
D DhcVS_1146 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DhcVS_1117 gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DhcVS_1440 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DhcVS_1116 gatC; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DhcVS_50 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DhcVS_612 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DhcVS_693 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DhcVS_659 thrS; threonyl-tRNA synthetase (thrS) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DhcVS_516 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DhcVS_61 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DhcVS_331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DhcVS_1524 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DhcVS_372 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DhcVS_182 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DhcVS_908 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DhcVS_517 lysU; lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DhcVS_1053 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DhcVS_312 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DhcVS_750 hisS2; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DhcVS_6 hisS1; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DhcVS_309 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DhcVS_310 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DhcVS_541 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DhcVS_1125 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dev03060]
D DhcVS_436 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DhcVS_867 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D DhcVS_1439 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D DhcVS_275 secD; protein-export membrane protein, preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D DhcVS_274 secF; protein-export membrane protein, preprotein translocase SecF subunit K03074 secF; preprotein translocase subunit SecF
D DhcVS_1165 yajC; preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D DhcVS_910 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DhcVS_376 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DhcVS_1482 tatB; sec-independent protein translocase TatB K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1483 tatA1; sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1484 tatA2; sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1481 tatC; sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DhcVS_975 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DhcVS_1155 lspA; lipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dev04122]
D DhcVS_70 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DhcVS_685 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:dev03018]
D DhcVS_533 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DhcVS_843 pnp; polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DhcVS_172 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DhcVS_1189 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D DhcVS_1490 metal dependent phophohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DhcVS_380 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DhcVS_1181 dnaK; molecular chaperone, DnaK family K04043 dnaK; molecular chaperone DnaK
D DhcVS_1210 groL; chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DhcVS_276 polyA; polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dev03030]
D DhcVS_1242 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DhcVS_524 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DhcVS_476 dnaX; DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DhcVS_47 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DhcVS_1009 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_248 DNA polymerase III domain protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_481 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DhcVS_492 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DhcVS_916 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DhcVS_303 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DhcVS_686 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DhcVS_1172 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DhcVS_536 dnlJ; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dev03410]
D DhcVS_806 nth; endonuclease III protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DhcVS_1170 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DhcVS_379 uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DhcVS_334 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D DhcVS_1172 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DhcVS_837 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DhcVS_536 dnlJ; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dev03420]
D DhcVS_1064 mfd; transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DhcVS_487 uvrA; excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A
D DhcVS_383 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D DhcVS_999 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DhcVS_256 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DhcVS_979 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DhcVS_1172 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DhcVS_536 dnlJ; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:dev03430]
D DhcVS_1002 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D DhcVS_978 mutL; DNA mismatch repair protein, MutL/HexB family K03572 mutL; DNA mismatch repair protein MutL
D DhcVS_256 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DhcVS_979 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DhcVS_837 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DhcVS_916 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DhcVS_1242 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DhcVS_1009 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_248 DNA polymerase III domain protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_524 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DhcVS_47 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DhcVS_476 dnaX; DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DhcVS_536 dnlJ; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:dev03440]
D DhcVS_837 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DhcVS_916 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DhcVS_519 recO; recombinational DNA repair protein (RecF pathway) K03584 recO; DNA repair protein RecO (recombination protein O)
D DhcVS_522 recR; recombination protein K06187 recR; recombination protein RecR
D DhcVS_1488 recA; recombination protein RecA K03553 recA; recombination protein RecA
D DhcVS_1172 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DhcVS_384 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D DhcVS_222 Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DhcVS_545 ruvB; Holliday junction DNA helicase subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DhcVS_385 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DhcVS_1051 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DhcVS_1242 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DhcVS_1009 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_248 DNA polymerase III domain protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_524 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DhcVS_47 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DhcVS_476 dnaX; DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DhcVS_278 priA; primosomal protein N, (replication factor Y) (superfamily II helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dev02010]
D DhcVS_146 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DhcVS_147 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D DhcVS_148 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D DhcVS_149 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DhcVS_813 livK1; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DhcVS_814 livK2; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DhcVS_816 livH; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D DhcVS_815 livM; ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D DhcVS_809 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DhcVS_812 livF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DhcVS_932 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_512 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_931 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D DhcVS_930 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D DhcVS_929 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D DhcVS_928 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D DhcVS_572 cation ABC transporter, periplasmc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DhcVS_574 cation ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D DhcVS_573 cation ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DhcVS_967 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D DhcVS_354 ABC-2 type transport system, permease protein K09694 nodJ; lipooligosaccharide transport system permease protein
D DhcVS_353 ABC-2 type transport system, ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D DhcVS_963 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D DhcVS_964 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:dev03070]
D DhcVS_1133 pulE; type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DhcVS_275 secD; protein-export membrane protein, preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D DhcVS_274 secF; protein-export membrane protein, preprotein translocase SecF subunit K03074 secF; preprotein translocase subunit SecF
D DhcVS_867 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D DhcVS_1439 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D DhcVS_436 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DhcVS_1165 yajC; preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D DhcVS_910 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DhcVS_376 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DhcVS_1482 tatB; sec-independent protein translocase TatB K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1483 tatA1; sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1484 tatA2; sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1481 tatC; sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dev02020]
D DhcVS_144 sensor kinase, two-component system, OmpR family K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DhcVS_137 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DhcVS_944 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DhcVS_1432 rdhD; DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DhcVS_1311 rdhD; DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D DhcVS_146 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DhcVS_1068 serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_907 degP2; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_906 degP1; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_106 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_1330 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_1380 rdhD; DNA binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_166 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_167 rdhC; sensor histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D DhcVS_1354 rdhC; sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D DhcVS_1394 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_86 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_94 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_1322 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_1 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DhcVS_600 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_373 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_92 rdhC; sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_1132 DNA-binding response regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU
D DhcVS_374 DNA-binding response regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D DhcVS_942 glnK; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D DhcVS_941 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1369 glutamate synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1142 general secretion K02650 pilA; type IV pilus assembly protein PilA
D DhcVS_142 general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D DhcVS_121 hupS; Ni/Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D DhcVS_93 rdhC; sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dev02024]
D DhcVS_1251 trpE; anthranilate/para-aminobenzoate synthass component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DhcVS_1252 trpG; anthranilate/para-aminobenzoate synthass component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DhcVS_106 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_1330 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_1380 rdhD; DNA binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_166 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_813 livK1; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DhcVS_814 livK2; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DhcVS_816 livH; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D DhcVS_815 livM; ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D DhcVS_809 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DhcVS_812 livF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DhcVS_904 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_817 AMP-binding protein, long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_973 ribD; riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DhcVS_932 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_512 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_931 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D DhcVS_930 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D DhcVS_929 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D DhcVS_928 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D DhcVS_1270 ddpA; ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DhcVS_1269 dppB; ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DhcVS_1268 dppC; ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DhcVS_1267 dppD; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DhcVS_1266 appF; ABC-type oligopeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DhcVS_1127 tagatose 1,6-diphosphate aldolase-like protein K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D DhcVS_910 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DhcVS_867 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D DhcVS_1439 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D DhcVS_436 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DhcVS_1165 yajC; preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D DhcVS_376 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DhcVS_1132 DNA-binding response regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D DhcVS_491 rpoD; DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DhcVS_533 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D DhcVS_932 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_512 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_931 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D DhcVS_930 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D DhcVS_929 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D DhcVS_928 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance [PATH:dev01502]
D DhcVS_570 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D DhcVS_1068 serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_907 degP2; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_906 degP1; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dev01000]
C 01001 Protein kinases [BR:dev01001]
D DhcVS_144 sensor kinase, two-component system, OmpR family K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DhcVS_167 rdhC; sensor histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D DhcVS_1354 rdhC; sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D DhcVS_600 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_373 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_92 rdhC; sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_1317 rdhC; sensory box sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DhcVS_134 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DhcVS_1076 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DhcVS_93 rdhC; sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:dev01009]
D DhcVS_454 ahcY; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
C 01002 Peptidases and inhibitors [BR:dev01002]
D DhcVS_1155 lspA; lipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DhcVS_1143 pulO; type IV prepilin leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DhcVS_119 Ni/Fe hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D DhcVS_740 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DhcVS_1196 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DhcVS_472 glmS; glucosamine-fructose-6-phosphateaminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DhcVS_127 DJ-1,4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D DhcVS_679 CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D DhcVS_901 pepA; cytosol aminopeptidase/leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DhcVS_438 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DhcVS_622 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DhcVS_782 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D DhcVS_333 ftsH; ATP-dependent metalloprotease, cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DhcVS_1471 peptidase, M28 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DhcVS_314 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DhcVS_961 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D DhcVS_1068 serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_907 degP2; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_906 degP1; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_235 subtilisin-like serine protease precursor K17734 aprX; serine protease AprX [EC:3.4.21.-]
D DhcVS_617 clpP; ATP-dependent Clp protease, proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DhcVS_258 lonC; ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DhcVS_1522 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D DhcVS_975 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DhcVS_157 pldB; hydrolase, alpha/beta fold family K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D DhcVS_308 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DhcVS_467 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein
C 01003 Glycosyltransferases [BR:dev01003]
D DhcVS_191 group 2 glycosyl transferase K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356]
D DhcVS_851 glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D DhcVS_1144 HAD-superfamily hydrolase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dev01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dev01011]
D DhcVS_570 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
C 01004 Lipid biosynthesis proteins [BR:dev01004]
D DhcVS_1059 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DhcVS_836 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DhcVS_1060 fabG; 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DhcVS_1055 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DhcVS_992 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DhcVS_904 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_817 AMP-binding protein, long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_484 plsX; fatty acid/phospholipid biosynthesis enzyme K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DhcVS_8 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1226 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1493 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_1178 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DhcVS_838 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:dev01006]
D DhcVS_332 hepT; heptaprenyl diphosphate synthase component II K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DhcVS_317 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DhcVS_648 miaA; tRNA delta(2)-isopentenylpyrophosphatetransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DhcVS_344 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:dev01007]
D DhcVS_1146 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DhcVS_541 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DhcVS_1125 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DhcVS_61 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DhcVS_1053 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DhcVS_331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DhcVS_908 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DhcVS_372 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DhcVS_182 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DhcVS_517 lysU; lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DhcVS_612 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DhcVS_750 hisS2; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DhcVS_6 hisS1; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DhcVS_693 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DhcVS_516 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DhcVS_312 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DhcVS_659 thrS; threonyl-tRNA synthetase (thrS) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DhcVS_50 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DhcVS_309 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DhcVS_310 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DhcVS_646 class I/II aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DhcVS_1124 aspC; aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D DhcVS_747 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_593 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DhcVS_1041 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DhcVS_9 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:dev00194]
D DhcVS_504 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DhcVS_503 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DhcVS_502 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DhcVS_501 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DhcVS_500 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DhcVS_499 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DhcVS_498 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DhcVS_497 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DhcVS_496 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dev03000]
D DhcVS_257 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DhcVS_1218 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D DhcVS_1457 transcription regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D DhcVS_1389 rdhR; transcriptional regulator, MarR family K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D DhcVS_1264 rdhR; transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D DhcVS_1325 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1400 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1361 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1365 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1376 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1381 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1428 rdhR; transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DhcVS_1415 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D DhcVS_1193 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D DhcVS_1070 transcriptional regulator, MerR family K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D DhcVS_571 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DhcVS_19 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DhcVS_1279 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DhcVS_1477 transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D DhcVS_1032 transcription regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D DhcVS_710 transcriptional regulator, PadR-type K10947 K10947; PadR family transcriptional regulator
D DhcVS_753 birA; biotin--acetyl-CoA-carboxylase ligase/BirA family transcriptional regulator K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DhcVS_834 hypothetical protein K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI
D DhcVS_264 hypothetical protein K07726 K07726; putative transcriptional regulator
D DhcVS_1120 DNA-binding protein K07729 K07729; putative transcriptional regulator
D DhcVS_489 DNA-binding protein K07729 K07729; putative transcriptional regulator
D DhcVS_1274 hypothetical protein K07730 K07730; putative transcriptional regulator
D DhcVS_1479 membrane bound regulatory protein, VcrC-like protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D DhcVS_1480 membrane bound regulatory protein, VcrC-like protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D DhcVS_881 NapH protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D DhcVS_1289 vcrC; membrane-bound regulatory protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D DhcVS_1285 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DhcVS_1295 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DhcVS_1183 hcrA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D DhcVS_981 pyrR; pyrimidine operon regulatory protein/uracilphosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DhcVS_1154 DnaK suppressor protein-like protein K06204 dksA; RNA polymerase-binding transcription factor
D DhcVS_285 transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D DhcVS_281 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:dev03021]
D DhcVS_444 rpoA; DNA-directed RNA polymerase alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DhcVS_543 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DhcVS_491 rpoD; DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K03086 rpoD; RNA polymerase primary sigma factor
D DhcVS_1130 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DhcVS_857 nusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA
D DhcVS_1061 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DhcVS_866 nusG; transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D DhcVS_1154 DnaK suppressor protein-like protein K06204 dksA; RNA polymerase-binding transcription factor
D DhcVS_676 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D DhcVS_1189 rho; transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dev03019]
D DhcVS_897 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DhcVS_380 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DhcVS_1490 metal dependent phophohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DhcVS_172 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DhcVS_533 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DhcVS_843 pnp; polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DhcVS_1189 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D DhcVS_1181 dnaK; molecular chaperone, DnaK family K04043 dnaK; molecular chaperone DnaK
D DhcVS_1210 groL; chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DhcVS_276 polyA; polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:dev03011]
D DhcVS_321 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DhcVS_423 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DhcVS_443 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DhcVS_433 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DhcVS_917 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DhcVS_414 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DhcVS_430 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DhcVS_448 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DhcVS_416 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DhcVS_442 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DhcVS_413 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DhcVS_441 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DhcVS_842 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DhcVS_507 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DhcVS_426 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DhcVS_915 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DhcVS_421 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DhcVS_1521 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DhcVS_290 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DhcVS_864 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DhcVS_420 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DhcVS_417 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DhcVS_418 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DhcVS_429 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DhcVS_431 rplF; ribosomal protein L6P/L9E K02933 RP-L6; large subunit ribosomal protein L6
D DhcVS_482 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DhcVS_863 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DhcVS_865 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DhcVS_862 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DhcVS_447 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DhcVS_427 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DhcVS_435 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DhcVS_424 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DhcVS_445 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DhcVS_432 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DhcVS_279 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DhcVS_656 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DhcVS_1107 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DhcVS_422 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DhcVS_419 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DhcVS_428 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DhcVS_1108 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DhcVS_1045 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DhcVS_425 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DhcVS_434 rpmD; ribosomal protein L30/L7E K02907 RP-L30; large subunit ribosomal protein L30
D DhcVS_1109 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DhcVS_1058 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DhcVS_868 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DhcVS_914 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DhcVS_657 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DhcVS_1232 rpiY; ribosomal protein L25 (general stress protein Ctc) K02897 RP-L25; large subunit ribosomal protein L25
D DhcVS_55 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DhcVS_893 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DhcVS_54 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dev03009]
D DhcVS_897 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DhcVS_2 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-]
D DhcVS_1154 DnaK suppressor protein-like protein K06204 dksA; RNA polymerase-binding transcription factor
D DhcVS_857 nusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA
D DhcVS_1061 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DhcVS_866 nusG; transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D DhcVS_347 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DhcVS_177 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DhcVS_682 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DhcVS_282 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DhcVS_329 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DhcVS_936 ygcA; RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DhcVS_695 rsuA; pseudouridine synthase, RsuA family K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DhcVS_1156 rluA; ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DhcVS_547 rimI; ribosomal-protein acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DhcVS_505 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D DhcVS_51 yqgF; Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DhcVS_1177 GTP-binding protein K03977 engA; GTPase
D DhcVS_643 GTP-binding protein K03665 hflX; GTPase
D DhcVS_739 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DhcVS_5 spoT; relA/spoT protein, GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DhcVS_854 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DhcVS_335 hypothetical protein K09710 ybeB; ribosome-associated protein
D DhcVS_1151 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D DhcVS_1237 ribosome-associated protein Y (PSrp-1) K05808 hpf; ribosome hibernation promoting factor
D DhcVS_45 GTP binding protein K06942 ychF; ribosome-binding ATPase
D DhcVS_1057 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:dev03016]
D DhcVS_352 polyA polymerase, tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DhcVS_727 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DhcVS_726 hypothetical protein K24956 ZBTB8OS; protein archease
D DhcVS_1146 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DhcVS_312 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DhcVS_908 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DhcVS_182 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DhcVS_331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DhcVS_1053 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DhcVS_517 lysU; lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DhcVS_612 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DhcVS_50 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DhcVS_693 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DhcVS_659 thrS; threonyl-tRNA synthetase (thrS) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DhcVS_516 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DhcVS_61 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DhcVS_372 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DhcVS_750 hisS2; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DhcVS_6 hisS1; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DhcVS_309 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DhcVS_310 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DhcVS_541 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DhcVS_1125 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DhcVS_18 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DhcVS_397 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DhcVS_550 methylase involved in ubiquinone/menaquinone biosynthesis K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
D DhcVS_446 truA; pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DhcVS_853 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DhcVS_70 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DhcVS_551 radical SAM superfamily K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D DhcVS_739 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DhcVS_648 miaA; tRNA delta(2)-isopentenylpyrophosphatetransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DhcVS_913 rnpA; RNase P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DhcVS_304 sRNA K01978 rnpB; M1 RNA
D DhcVS_1072 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DhcVS_1234 2 -5 RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D DhcVS_1166 miaB; tRNA I(6) A37 thitransferase miaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DhcVS_835 tRNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DhcVS_280 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DhcVS_685 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DhcVS_702 queA; S-adenosylmethionine:tRNAribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DhcVS_1487 6-pyruvoyl tetrahydrobiopterin synthase-like protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DhcVS_1404 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_88 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_96 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1263 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1336 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1340 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1342 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1393 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1421 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_1327 rdhA; reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_546 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D DhcVS_52 qrt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DhcVS_1203 PP-loop K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DhcVS_1208 metal-dependent protease with chaperone activity K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DhcVS_339 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DhcVS_843 pnp; polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:dev03012]
D DhcVS_855 infB; translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2
D DhcVS_658 infC; translation initiation factor 3 (IF-3) K02520 infC; translation initiation factor IF-3
D DhcVS_200 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DhcVS_320 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DhcVS_869 tuf; translation elongation factor K02358 tuf; elongation factor Tu
D DhcVS_415 fusA1; translation elongation factor G K02355 fusA; elongation factor G
D DhcVS_995 fusA2; translation elongation factor, GTPase K02355 fusA; elongation factor G
D DhcVS_993 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DhcVS_318 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D DhcVS_994 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DhcVS_535 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DhcVS_440 infA; translation initiation factor 1 (IF-1) K02518 infA; translation initiation factor IF-1
D DhcVS_621 efp; translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) K02356 efp; elongation factor P
D DhcVS_773 efp; translation elongation factor P K02356 efp; elongation factor P
D DhcVS_772 lysyl-tRNA synthetase, truncated K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D DhcVS_509 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:dev03110]
D DhcVS_56 clpC; ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DhcVS_1194 clp; ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DhcVS_1181 dnaK; molecular chaperone, DnaK family K04043 dnaK; molecular chaperone DnaK
D DhcVS_1210 groL; chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DhcVS_1192 dnaJ3; molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D DhcVS_1180 dnaJ2; molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D DhcVS_1182 grpE; molecular chaperone K03687 GRPE; molecular chaperone GrpE
D DhcVS_825 HSP20/alpha crystallin K13993 HSP20; HSP20 family protein
D DhcVS_1209 groS; co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D DhcVS_1068 serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_907 degP2; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_906 degP1; serine protease, DegP/HtrA family K04771 degP; serine protease Do [EC:3.4.21.107]
D DhcVS_333 ftsH; ATP-dependent metalloprotease, cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DhcVS_497 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DhcVS_1212 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DhcVS_1213 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D DhcVS_1025 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DhcVS_599 trx; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:dev04131]
D DhcVS_336 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DhcVS_531 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:dev03032]
D DhcVS_303 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DhcVS_257 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DhcVS_1 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DhcVS_481 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DhcVS_479 dnaC; DNA replication protein K02315 dnaC; DNA replication protein DnaC
D DhcVS_492 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DhcVS_916 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DhcVS_1242 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DhcVS_1009 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_248 DNA polymerase III domain protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_47 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DhcVS_476 dnaX; DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DhcVS_524 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DhcVS_686 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DhcVS_1172 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DhcVS_536 dnlJ; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DhcVS_1512 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DhcVS_4 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DhcVS_624 topA; topoisomerase IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dev03036]
D DhcVS_257 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DhcVS_897 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DhcVS_1 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DhcVS_577 ftsA1; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DhcVS_283 ftsA2; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DhcVS_381 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DhcVS_576 ftsZ1; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DhcVS_284 ftsZ2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DhcVS_1285 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DhcVS_1295 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DhcVS_682 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DhcVS_63 xerD1; site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D DhcVS_240 xerD2; site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D DhcVS_998 xerD4; integrase/recombinase K04763 xerD; integrase/recombinase XerD
C 03400 DNA repair and recombination proteins [BR:dev03400]
D DhcVS_1238 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DhcVS_806 nth; endonuclease III protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DhcVS_1073 NUDIX hydrolase domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DhcVS_358 dut; deoxyuridine 5-prime-triphosphate nucleotidohydrolase, dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DhcVS_379 uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DhcVS_1170 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DhcVS_334 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D DhcVS_508 nfi; nfi endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D DhcVS_837 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DhcVS_536 dnlJ; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DhcVS_1172 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DhcVS_487 uvrA; excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A
D DhcVS_383 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D DhcVS_999 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DhcVS_256 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DhcVS_979 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DhcVS_543 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DhcVS_444 rpoA; DNA-directed RNA polymerase alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DhcVS_1064 mfd; transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DhcVS_1002 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D DhcVS_978 mutL; DNA mismatch repair protein, MutL/HexB family K03572 mutL; DNA mismatch repair protein MutL
D DhcVS_1242 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DhcVS_1009 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_248 DNA polymerase III domain protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DhcVS_47 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DhcVS_476 dnaX; DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DhcVS_524 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DhcVS_916 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DhcVS_255 Vsr domain protein T:G mismatch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D DhcVS_1488 recA; recombination protein RecA K03553 recA; recombination protein RecA
D DhcVS_384 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D DhcVS_222 Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DhcVS_545 ruvB; Holliday junction DNA helicase subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DhcVS_385 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DhcVS_278 priA; primosomal protein N, (replication factor Y) (superfamily II helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DhcVS_490 sbcC; ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D DhcVS_694 sbcD; DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D DhcVS_58 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DhcVS_1051 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DhcVS_519 recO; recombinational DNA repair protein (RecF pathway) K03584 recO; DNA repair protein RecO (recombination protein O)
D DhcVS_522 recR; recombination protein K06187 recR; recombination protein RecR
D DhcVS_923 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D DhcVS_1512 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DhcVS_4 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DhcVS_624 topA; topoisomerase IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DhcVS_10 dinP; DNA polymerase IV (Y-family) K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DhcVS_1522 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D DhcVS_1489 recX; regulatory protein RecX K03565 recX; regulatory protein
D DhcVS_564 nrdJ2; ribonucleotide reductase, cobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_74 nrdJ1; ribonucleotide reductase, cobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DhcVS_286 nrdA; ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:dev03029]
D DhcVS_855 infB; translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2
D DhcVS_658 infC; translation initiation factor 3 (IF-3) K02520 infC; translation initiation factor IF-3
D DhcVS_320 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DhcVS_869 tuf; translation elongation factor K02358 tuf; elongation factor Tu
D DhcVS_415 fusA1; translation elongation factor G K02355 fusA; elongation factor G
D DhcVS_995 fusA2; translation elongation factor, GTPase K02355 fusA; elongation factor G
D DhcVS_541 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DhcVS_182 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DhcVS_612 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DhcVS_693 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DhcVS_1053 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DhcVS_1117 gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DhcVS_1440 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DhcVS_1116 gatC; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DhcVS_916 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DhcVS_1181 dnaK; molecular chaperone, DnaK family K04043 dnaK; molecular chaperone DnaK
D DhcVS_1182 grpE; molecular chaperone K03687 GRPE; molecular chaperone GrpE
D DhcVS_1210 groL; chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DhcVS_1209 groS; co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D DhcVS_1192 dnaJ3; molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D DhcVS_1180 dnaJ2; molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D DhcVS_70 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DhcVS_910 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dev02000]
D DhcVS_963 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D DhcVS_964 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D DhcVS_1416 ABC-transporter protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DhcVS_146 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DhcVS_147 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D DhcVS_148 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D DhcVS_149 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DhcVS_813 livK1; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DhcVS_814 livK2; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DhcVS_816 livH; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D DhcVS_815 livM; ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D DhcVS_809 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DhcVS_812 livF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DhcVS_362 amino acid ABC transporter, periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DhcVS_361 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D DhcVS_360 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DhcVS_932 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_512 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D DhcVS_931 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D DhcVS_930 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D DhcVS_929 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D DhcVS_928 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D DhcVS_1270 ddpA; ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DhcVS_1269 dppB; ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DhcVS_1268 dppC; ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DhcVS_1267 dppD; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DhcVS_1266 appF; ABC-type oligopeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DhcVS_68 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DhcVS_721 ABC-type molybdenum transport system ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DhcVS_588 fepB; ABC-type cobalamin/Fe3+ siderophore transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D DhcVS_589 fepD; ABC-type cobalamin/Fe3+ siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D DhcVS_590 fepC; ABC-type cobalamin/Fe3+ siderophore transport system, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D DhcVS_572 cation ABC transporter, periplasmc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DhcVS_574 cation ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D DhcVS_573 cation ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DhcVS_967 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D DhcVS_354 ABC-2 type transport system, permease protein K09694 nodJ; lipooligosaccharide transport system permease protein
D DhcVS_353 ABC-2 type transport system, ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D DhcVS_718 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_756 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_1502 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_460 ABC-type transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_1122 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_123 ABC transporter, type 2, substrate-binding protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_124 ABC transporter, type 2, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_701 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DhcVS_755 ABC transproter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_717 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_1501 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_1121 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_125 ABC transporter, type 2, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_461 ABC-type transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_700 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DhcVS_719 ABC-type transport system involved in Fe-S cluster assembly ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DhcVS_351 cation channel protein K10716 kch; voltage-gated potassium channel
D DhcVS_943 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D DhcVS_1168 mscL; large conductance mechanosensitive channel, MscL family K03282 mscL; large conductance mechanosensitive channel
D DhcVS_1456 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D DhcVS_365 corA1; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D DhcVS_521 corA2; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D DhcVS_1273 camphor resistance-like protein K06199 crcB; fluoride exporter
D DhcVS_1207 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DhcVS_1188 BNR/Asp-box repeat domain protein K21449 ata; trimeric autotransporter adhesin
D DhcVS_514 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D DhcVS_1509 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D DhcVS_628 Kef-type K+ transport systems membrane component K26730 napA; Na+:H+ antiporter
D DhcVS_28 trkH; cation transport protein, Trk system K03498 trkH; trk/ktr system potassium uptake protein
D DhcVS_25 trkA1; cation transport protein, Trk system K03499 trkA; trk/ktr system potassium uptake protein
D DhcVS_26 trkA2; cation transport protein, Trk system K03499 trkA; trk/ktr system potassium uptake protein
D DhcVS_29 trkA3; cation transport protein, Trk system K03499 trkA; trk/ktr system potassium uptake protein
D DhcVS_780 anion permease, ArsB-like protein K03893 arsB; arsenical pump membrane protein
D DhcVS_1026 arsenite transporter-like permease, ACR3 family K03325 ACR3; arsenite transporter
D DhcVS_366 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D DhcVS_1228 membrane transporter, MarC family K05595 marC; multiple antibiotic resistance protein
D DhcVS_661 hypothetical protein K03646 tolA; colicin import membrane protein
D DhcVS_672 vpp1; V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D DhcVS_690 vpp2; V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D DhcVS_557 cytochrome c biogenesis-type protein K06196 ccdA; cytochrome c-type biogenesis protein
D DhcVS_1278 feoA; Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D DhcVS_1277 feoB; Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B
D DhcVS_733 membrane protein, MgtC / SapB family K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:dev02044]
D DhcVS_1133 pulE; type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DhcVS_1143 pulO; type IV prepilin leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DhcVS_1142 general secretion K02650 pilA; type IV pilus assembly protein PilA
D DhcVS_142 general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D DhcVS_1134 pulF; type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D DhcVS_1140 pilM; Tfp pilus assembly protein ATPase K02662 pilM; type IV pilus assembly protein PilM
D DhcVS_793 pilT1; twitching mobility protein K02669 pilT; twitching motility protein PilT
D DhcVS_1038 pilT2; twitching mobility protein K02669 pilT; twitching motility protein PilT
D DhcVS_1141 pilT3; Tfp pilus assembly protein pilus retraction ATPase K02669 pilT; twitching motility protein PilT
D DhcVS_24 comEA; competence protein K02237 comEA; competence protein ComEA
D DhcVS_356 comEB; cytidine/deoxycytidylate deaminase, Zn-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DhcVS_23 comEC; DNA internalization competence protein K02238 comEC; competence protein ComEC
D DhcVS_376 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DhcVS_275 secD; protein-export membrane protein, preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D DhcVS_867 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D DhcVS_274 secF; protein-export membrane protein, preprotein translocase SecF subunit K03074 secF; preprotein translocase subunit SecF
D DhcVS_1439 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D DhcVS_436 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DhcVS_1165 yajC; preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D DhcVS_910 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DhcVS_1482 tatB; sec-independent protein translocase TatB K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1483 tatA1; sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1484 tatA2; sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D DhcVS_1481 tatC; sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dev02042]
D DhcVS_1207 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DhcVS_199 membrane protein, Hly III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:dev02022]
D DhcVS_144 sensor kinase, two-component system, OmpR family K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DhcVS_137 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DhcVS_944 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DhcVS_1432 rdhD; DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DhcVS_1311 rdhD; DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D DhcVS_106 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_1330 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_1380 rdhD; DNA binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_166 rdhD; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DhcVS_167 rdhC; sensor histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D DhcVS_1354 rdhC; sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D DhcVS_1394 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_86 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_94 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_1322 rdhD; DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D DhcVS_143 DNA-binding response regulator, two-component system, OmpR family K02483 K02483; two-component system, OmpR family, response regulator
D DhcVS_1355 rdhD; DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DhcVS_600 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_373 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_92 rdhC; sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D DhcVS_1132 DNA-binding response regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU
D DhcVS_374 DNA-binding response regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D DhcVS_1317 rdhC; sensory box sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DhcVS_134 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DhcVS_1076 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DhcVS_93 rdhC; sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:dev02035]
D DhcVS_793 pilT1; twitching mobility protein K02669 pilT; twitching motility protein PilT
D DhcVS_1038 pilT2; twitching mobility protein K02669 pilT; twitching motility protein PilT
D DhcVS_1141 pilT3; Tfp pilus assembly protein pilus retraction ATPase K02669 pilT; twitching motility protein PilT
D DhcVS_1142 general secretion K02650 pilA; type IV pilus assembly protein PilA
D DhcVS_142 general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D DhcVS_1134 pulF; type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D DhcVS_1143 pulO; type IV prepilin leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DhcVS_1140 pilM; Tfp pilus assembly protein ATPase K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:dev04812]
D DhcVS_1094 hypothetical protein K06990 MEMO1; MEMO1 family protein
D DhcVS_576 ftsZ1; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DhcVS_284 ftsZ2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DhcVS_577 ftsA1; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DhcVS_283 ftsA2; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DhcVS_529 GTPase domain, tubulin/FtsZ K22222 cetZ; tubulin-like protein CetZ
D DhcVS_922 FtsZ-like protein K22222 cetZ; tubulin-like protein CetZ
D DhcVS_1285 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DhcVS_1295 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dev04147]
D DhcVS_533 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DhcVS_531 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DhcVS_651 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DhcVS_1460 peroxiredoxin-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D DhcVS_1210 groL; chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DhcVS_1181 dnaK; molecular chaperone, DnaK family K04043 dnaK; molecular chaperone DnaK
D DhcVS_328 IMP dehydrogenase protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DhcVS_869 tuf; translation elongation factor K02358 tuf; elongation factor Tu
D DhcVS_397 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DhcVS_904 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_817 AMP-binding protein, long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DhcVS_454 ahcY; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DhcVS_437 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DhcVS_1044 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DhcVS_1043 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DhcVS_941 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_1369 glutamate synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DhcVS_539 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DhcVS_1199 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DhcVS_649 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:dev02048]
D DhcVS_257 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DhcVS_1466 adenine-specific DNA-methyltransferase-like protein K24451 zim; modification methylase
D DhcVS_576 ftsZ1; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DhcVS_284 ftsZ2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DhcVS_1146 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DhcVS_70 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:dev01504]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dev03100]
D DhcVS_62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DhcVS_1441 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DhcVS_265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DhcVS_654 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_830 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_1247 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_1462 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_629 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DhcVS_714 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DhcVS_918 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DhcVS_1223 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DhcVS_713 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DhcVS_896 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DhcVS_895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DhcVS_1507 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DhcVS_1222 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DhcVS_757 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DhcVS_639 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DhcVS_831 tRNA-His K14226 tRNA-His; tRNA His
D DhcVS_892 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DhcVS_712 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_1225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_1246 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_662 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_1221 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DhcVS_778 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DhcVS_722 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DhcVS_364 tRNA-Met K14230 tRNA-Met; tRNA Met
D DhcVS_1097 tRNA-Met K14230 tRNA-Met; tRNA Met
D DhcVS_641 tRNA-Met K14230 tRNA-Met; tRNA Met
D DhcVS_711 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DhcVS_667 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DhcVS_1518 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DhcVS_637 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DhcVS_626 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_513 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_627 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_1169 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DhcVS_870 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DhcVS_872 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DhcVS_326 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DhcVS_1220 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DhcVS_871 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DhcVS_966 tRNA-Val K14237 tRNA-Val; tRNA Val
D DhcVS_1248 tRNA-Val K14237 tRNA-Val; tRNA Val
D DhcVS_163 tRNA-Val K14237 tRNA-Val; tRNA Val
D DhcVS_893 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DhcVS_54 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DhcVS_55 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DhcVS_304 sRNA K01978 rnpB; M1 RNA
D DhcVS_1281 ssrA; tmRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DhcVS_818 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D DhcVS_819 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D DhcVS_1027 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DhcVS_1028 msrB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DhcVS_35 GltD-like oxidoreductase, FAD/NAD(P)-binding, PyrK K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DhcVS_151 arsenate reductase-like protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DhcVS_1095 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DhcVS_563 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DhcVS_79 rdhI; radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DhcVS_100 rdhI; radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DhcVS_1337 rdhI; radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DhcVS_1149 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DhcVS_1453 hycC; hydrogenase subunit, HycC-like protein K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D DhcVS_1451 hydrogenase subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D DhcVS_1450 hydrogenase subunit, NADH dehydrogenase subunit N-like protein K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D DhcVS_1000 acetyltransferase, GNAT family K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D DhcVS_874 glycosyl transferase, group 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D DhcVS_839 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DhcVS_1478 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DhcVS_1046 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D DhcVS_1492 PHP C-terminal domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D DhcVS_1406 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DhcVS_805 hydrolase, TatD family, Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DhcVS_666 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DhcVS_959 glycosyl transferase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D DhcVS_193 LmbE K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D DhcVS_920 translation initiation inhibitor, yjgF family K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DhcVS_1438 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D DhcVS_369 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D DhcVS_822 NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D DhcVS_763 echA; hydrogenase, EchA subunit K14086 echA; ech hydrogenase subunit A
D DhcVS_764 echB; hydrogenase, EchB subunit K14087 echB; ech hydrogenase subunit B
D DhcVS_765 echC; hydrogenase, EchC subunit K14088 echC; ech hydrogenase subunit C
D DhcVS_770 echE; hydrogenase, EchE subunit K14090 echE; ech hydrogenase subunit E
D DhcVS_771 echF; hydrogenase, EchF subunit K14091 echF; ech hydrogenase subunit F
C 99983 Lipid metabolism
D DhcVS_1047 DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D DhcVS_363 DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D DhcVS_1048 DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DhcVS_664 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DhcVS_34 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D DhcVS_933 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D DhcVS_614 tig1; trigger factor K03545 tig; trigger factor
D DhcVS_174 mpxE2; molybdopterin oxidoreductase, formate dehydrogenase accessory protein K02380 fdhE; FdhE protein
D DhcVS_1280 smpB; ssrA binding protein (smpB) K03664 smpB; SsrA-binding protein
D DhcVS_1215 hypC; hydrogenase maturation factor K04653 hypC; hydrogenase expression/formation protein HypC
D DhcVS_1216 hypD; hydrogenase maturation factor K04654 hypD; hydrogenase expression/formation protein HypD
D DhcVS_1217 hypE; hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D DhcVS_1476 AIR synthase domain protein K04655 hypE; hydrogenase expression/formation protein HypE
D DhcVS_1214 hypF; hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D DhcVS_186 glutaredoxin protein K06191 nrdH; glutaredoxin-like protein NrdH
D DhcVS_858 magnesium chelatase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D DhcVS_1240 radC2; DNA repair protein K03630 radC; DNA repair protein RadC
D DhcVS_511 radC1; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DhcVS_1494 HhH-GPD protein K07457 K07457; endonuclease III related protein
D DhcVS_687 endonuclease K07460 yraN; putative endonuclease
D DhcVS_558 hypothetical protein K07465 K07465; putative RecB family exonuclease
D DhcVS_625 Rossmann fold DNA uptake nucleotide-binding protein K04096 smf; DNA processing protein
D DhcVS_480 dnaD; primosome component K02086 dnaD; DNA replication protein
D DhcVS_689 translin K07477 K07477; translin
D DhcVS_1091 ATPase, AAA family K07478 ycaJ; putative ATPase
D DhcVS_1293 DNA invertase/resolvase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D DhcVS_776 transposase K07497 K07497; putative transposase
D DhcVS_777 transposase IS3/IS911-family K07497 K07497; putative transposase
D DhcVS_64 transposase IS3/IS911-family K07497 K07497; putative transposase
D DhcVS_65 transposase K07497 K07497; putative transposase
D DhcVS_89 transposase IS3/IS911-family K07497 K07497; putative transposase
D DhcVS_90 transposase K07497 K07497; putative transposase
D DhcVS_1332 transposase IS3/IS911-family K07497 K07497; putative transposase
D DhcVS_1333 transposase K07497 K07497; putative transposase
D DhcVS_1309 transposase IS3/IS911-family K07497 K07497; putative transposase
D DhcVS_1310 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D DhcVS_523 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DhcVS_1418 integral membrane efflux protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D DhcVS_32 pitA; phosphate/sulfate transporter, PiT family K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D DhcVS_607 cooC; carbon monoxide dehydrogenase nickel-insertion accessory protein K07321 cooC; CO dehydrogenase maturation factor
D DhcVS_909 RNA-binding protein K06346 jag; spoIIIJ-associated protein
D DhcVS_996 hypothetical protein K06384 spoIIM; stage II sporulation protein M
D DhcVS_215 resolvase domain protein, PinR type K06400 spoIVCA; site-specific DNA recombinase
D DhcVS_1010 resolvase-like protein K06400 spoIVCA; site-specific DNA recombinase
D DhcVS_1282 ssrA integrase K06400 spoIVCA; site-specific DNA recombinase
D DhcVS_1292 ssrA integrase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
D DhcVS_1030 TfoX domain protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D DhcVS_1081 typA; GTP-binding protein K06207 typA; GTP-binding protein
D DhcVS_1099 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D DhcVS_150 phoU; phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D DhcVS_1473 cutA; periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D DhcVS_1033 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DhcVS_180 integral membrane colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D DhcVS_840 ATP-dependent RNA helicase, DEAD/DEAH box family K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D DhcVS_775 membrane protein, MmpL family K06994 K06994; putative drug exporter of the RND superfamily
D DhcVS_266 patatin-like phospholipase K07001 K07001; NTE family protein
D DhcVS_474 HAD-superfamily hydrolase, subfamily IA K07025 K07025; putative hydrolase of the HAD superfamily
D DhcVS_720 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 sufB; Fe-S cluster assembly protein SufB
D DhcVS_696 phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase
D DhcVS_783 phosphoribosyltransferase-like protein K07100 K07100; putative phosphoribosyl transferase
D DhcVS_670 hypothetical protein K07100 K07100; putative phosphoribosyl transferase
D DhcVS_1470 LemA K03744 lemA; LemA protein
D DhcVS_960 hypothetical protein K03975 dedA; membrane-associated protein
D DhcVS_823 hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D DhcVS_195 DNA-binding protein K06933 K06933; uncharacterized protein
D DhcVS_1504 hypothetical protein K06934 K06934; uncharacterized protein
D DhcVS_567 hypothetical protein K06940 K06940; uncharacterized protein
D DhcVS_506 hypothetical protein K06960 K06960; uncharacterized protein
D DhcVS_1520 Zn-dependent protease K06973 K06973; uncharacterized protein
D DhcVS_455 hypothetical protein K07028 K07028; uncharacterized protein
D DhcVS_1410 hypothetical protein K07034 K07034; uncharacterized protein
D DhcVS_1233 hypothetical protein K07045 K07045; uncharacterized protein
D DhcVS_877 permease K07089 K07089; uncharacterized protein
D DhcVS_549 hypothetical protein K07089 K07089; uncharacterized protein
D DhcVS_466 hypothetical protein K07159 K07159; uncharacterized protein
D DhcVS_787 hypothetical protein K07159 K07159; uncharacterized protein
D DhcVS_302 hypothetical protein K07164 K07164; uncharacterized protein
D DhcVS_912 hypothetical protein K08998 K08998; uncharacterized protein
D DhcVS_495 hypothetical protein K08999 K08999; uncharacterized protein
D DhcVS_289 GatB domain containing protein K09117 K09117; uncharacterized protein
D DhcVS_368 hypothetical protein K09122 K09122; uncharacterized protein
D DhcVS_1075 hypothetical protein K09131 K09131; uncharacterized protein
D DhcVS_790 hypothetical protein K09740 K09740; uncharacterized protein
D DhcVS_841 hypothetical protein K09764 K09764; uncharacterized protein
D DhcVS_974 hypothetical periplasmic protein K09807 K09807; uncharacterized protein
D DhcVS_1469 hypothetical protein K09981 K09981; uncharacterized protein
D DhcVS_1186 hypothetical protein K07502 yprB; uncharacterized protein
D DhcVS_31 hypothetical protein K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024