+F Repair protein KO #

  DNA Repair and Recombination Proteins - Dehalogenimonas sp. WBC-2

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D DGWBC_0046 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E DGWBC_0951 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D DGWBC_1493 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D DGWBC_0046 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E DGWBC_1354 uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E DGWBC_0440 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E DGWBC_0242 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E DGWBC_0951 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E DGWBC_1469 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] E DGWBC_0754 endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D RecJ E DGWBC_1014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E DGWBC_1021 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E DGWBC_0240 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E DGWBC_0925 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E DGWBC_0546 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E DGWBC_1140 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E DGWBC_1167 uvrD_pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E DGWBC_1182 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E DGWBC_0240 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E DGWBC_1021 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F DGWBC_1444 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F DGWBC_1443 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F DGWBC_0508 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F DGWBC_0841 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E DGWBC_1147 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E DGWBC_0772 recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E DGWBC_0570 mutL; MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme E DGWBC_0030 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E DGWBC_1166 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E DGWBC_0211 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E DGWBC_0824 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E DGWBC_0926 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E DGWBC_1021 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E DGWBC_1167 uvrD_pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E DGWBC_1182 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E DGWBC_0967 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E DGWBC_1779 rexA; RecA K03553 recA; recombination protein RecA E DGWBC_1372 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E DGWBC_1429 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E DGWBC_0392 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E DGWBC_1652 priA; helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E DGWBC_0921 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E DGWBC_1080 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E DGWBC_1779 rexA; RecA K03553 recA; recombination protein RecA E DGWBC_1578 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E DGWBC_1211 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E DGWBC_1014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E DGWBC_0931 DNA recombination mediator protein K03584 recO; DNA repair protein RecO (recombination protein O) E DGWBC_0928 recombination protein RecR K06187 recR; recombination protein RecR E DGWBC_0721 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E DGWBC_1372 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E DGWBC_1429 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E DGWBC_0392 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins E DGWBC_0921 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E DGWBC_1080 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex E DGWBC_0735 hypothetical protein K10979 ku; DNA end-binding protein Ku E DGWBC_0115 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] E DGWBC_0734 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F DGWBC_0194 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F DGWBC_0223 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F DGWBC_0821 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F DGWBC_1014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F DGWBC_0931 DNA recombination mediator protein K03584 recO; DNA repair protein RecO (recombination protein O) F DGWBC_0928 recombination protein RecR K06187 recR; recombination protein RecR F DGWBC_1021 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F DGWBC_0310 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F DGWBC_0925 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F DGWBC_0546 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D DGWBC_0005 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D DGWBC_1779 rexA; RecA K03553 recA; recombination protein RecA D DGWBC_0195 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DGWBC_0721 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D DGWBC_0967 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DGWBC_1778 recX; Regulatory protein RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D DGWBC_1493 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DGWBC_0296 ribonucleotide reductase of class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGWBC_0410 ribonucleotide reductase of class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGWBC_1571 ribonucleotide reductase of class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGWBC_1642 ribonucleotide reductase of class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGWBC_1745 ribonucleotide reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: October 9, 2025