+D GENES KO
#
KEGG Orthology (KO) - Dyadobacter fermentans
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dfe00010]
D Dfer_4328 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_3960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_1231 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_4571 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Dfer_4096 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dfer_5696 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_2688 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_3869 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dfer_1046 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dfer_2700 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dfer_4375 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Dfer_4373 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dfer_3378 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dfer_3887 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dfer_3509 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dfer_5625 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_0765 Alcohol dehydrogenase zinc-binding domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Dfer_0072 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Dfer_4994 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dfer_2820 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dfer_5039 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dfer_5618 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_2516 Aldehyde Dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
C 00020 Citrate cycle (TCA cycle) [PATH:dfe00020]
D Dfer_0554 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Dfer_1208 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dfer_1209 Aconitase B, N-terminal protein K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Dfer_3730 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dfer_5752 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Dfer_5753 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_0455 catalytic domain of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_2911 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dfer_2736 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dfer_2213 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Dfer_3970 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dfer_3971 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dfer_3969 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dfer_2816 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dfer_4459 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dfer_4539 malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D Dfer_3887 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dfer_3509 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dfer_5625 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:dfe00030]
D Dfer_1231 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dfer_5182 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dfer_5183 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Dfer_3105 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Dfer_2435 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Dfer_5181 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Dfer_5109 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dfer_2126 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_2127 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_5103 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_5105 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_2935 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_2936 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_5045 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Dfer_2177 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Dfer_4874 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Dfer_3950 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Dfer_1980 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_0421 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Dfer_4126 KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dfer_1016 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dfer_2516 Aldehyde Dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D Dfer_1228 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Dfer_0311 Pyrrolo-quinoline quinone K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Dfer_1378 Quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Dfer_1611 Glycerol dehydrogenase (acceptor) K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Dfer_4957 Pyrrolo-quinoline quinone K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Dfer_1014 Quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Dfer_4620 heme-binding protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Dfer_2426 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4750 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4886 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4804 carbohydrate kinase FGGY K25031 gntK; gluconokinase [EC:2.7.1.12]
D Dfer_4125 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Dfer_0481 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29]
D Dfer_2440 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29]
D Dfer_5696 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_2688 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_4096 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_4571 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:dfe00040]
D Dfer_0486 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Dfer_3039 Cupin 2 conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D Dfer_2840 Cupin 2 conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D Dfer_2839 4-deoxy-L-threo-5-hexosulose-uronateketol-isomer ase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Dfer_2838 short-chain dehydrogenase/reductase SDR K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Dfer_4124 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Dfer_4128 Mannitol dehydrogenase domain K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D Dfer_2842 Mannitol dehydrogenase domain K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D Dfer_5737 Altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D Dfer_0595 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Dfer_4123 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Dfer_1408 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Dfer_4306 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Dfer_1377 Mandelate racemase/muconate lactonizing protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D Dfer_1008 Mandelate racemase/muconate lactonizing protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D Dfer_2609 Beta-galactosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Dfer_4626 GHMP kinase K16190 GLCAK; glucuronokinase [EC:2.7.1.43]
D Dfer_0064 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_3001 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_4625 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dfer_2872 Xylose isomerase domain protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Dfer_2396 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Dfer_5109 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dfer_0399 putative L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Dfer_2397 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Dfer_2398 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D Dfer_4109 carbohydrate kinase FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Dfer_4723 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Dfer_3313 FAD linked oxidase domain protein K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D Dfer_4611 xylose isomerase domain-containing protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Dfer_3859 fumarylacetoacetate (FAA) hydrolase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D Dfer_4272 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Dfer_2501 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Dfer_3132 carbohydrate kinase FGGY K22935 XK1; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:dfe00051]
D Dfer_2043 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Dfer_1600 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dfer_5716 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dfer_3304 mannose-6-phosphate isomerase type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dfer_4415 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Dfer_3883 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dfer_3954 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Dfer_3785 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dfer_1953 NUDIX hydrolase K18447 NUDX14; ADP-sugar diphosphatase [EC:3.6.1.21]
D Dfer_5643 short-chain dehydrogenase/reductase SDR K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D Dfer_5740 amidohydrolase 2 K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D Dfer_1860 Mandelate racemase/muconate lactonizing protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D Dfer_5739 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D Dfer_4324 HpcH/HpaI aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53]
D Dfer_3040 short-chain dehydrogenase/reductase SDR K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D Dfer_4611 xylose isomerase domain-containing protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_4571 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Dfer_4096 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dfer_3313 FAD linked oxidase domain protein K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D Dfer_4723 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Dfer_5696 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_2688 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_3869 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dfer_1603 Levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D Dfer_4874 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Dfer_4825 HAD-superfamily hydrolase, subfamily IA, variant 3 K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:dfe00052]
D Dfer_2820 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dfer_5039 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dfer_2819 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dfer_0465 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dfer_2894 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dfer_2167 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dfer_4625 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_4328 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_3960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_4139 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Dfer_3361 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Dfer_5180 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dfer_1855 Carbohydrate binding family 6 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_4571 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Dfer_1705 ketose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D Dfer_0586 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Dfer_1011 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Dfer_5256 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Dfer_1010 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Dfer_1015 2-keto-3-deoxy-galactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D Dfer_0107 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dfer_1312 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dfer_1707 sugar isomerase (SIS) K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:dfe00053]
D Dfer_0064 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_3001 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_4626 GHMP kinase K16190 GLCAK; glucuronokinase [EC:2.7.1.43]
D Dfer_2609 Beta-galactosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Dfer_2426 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4750 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4886 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_0063 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dfer_4589 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dfer_2872 Xylose isomerase domain protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Dfer_2396 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Dfer_1407 Mandelate racemase/muconate lactonizing protein K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D Dfer_3859 fumarylacetoacetate (FAA) hydrolase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D Dfer_4563 Dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D Dfer_4272 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Dfer_2501 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:dfe00500]
D Dfer_0107 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dfer_1312 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dfer_4625 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dfer_4868 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Dfer_0289 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_5683 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_4512 Carbohydrate binding family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_2105 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_3003 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_4603 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Dfer_1953 NUDIX hydrolase K18447 NUDX14; ADP-sugar diphosphatase [EC:3.6.1.21]
D Dfer_4558 Starch synthase catalytic domain protein K00703 glgA; starch synthase [EC:2.4.1.21]
D Dfer_3735 Glycogen (starch) synthase K00693 GYS; glycogen synthase [EC:2.4.1.11]
D Dfer_0151 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dfer_0213 glycoside hydrolase family 13 domain protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dfer_1955 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dfer_3228 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Dfer_2425 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Dfer_0152 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Dfer_0624 alpha amylase catalytic region K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Dfer_2083 alpha amylase catalytic region K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Dfer_0153 alpha amylase catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Dfer_2756 Kojibiose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D Dfer_2757 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D Dfer_0396 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Dfer_0647 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Dfer_0397 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Dfer_1490 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Dfer_1021 trehalose-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Dfer_2671 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_4328 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_3960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_1231 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dfer_1600 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dfer_5716 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dfe00520]
D Dfer_3086 glycoside hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D Dfer_2708 beta-lactamase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dfer_3192 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_4327 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_1725 Glycoside hydrolase, family 20, catalytic core K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_4487 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Dfer_2786 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Dfer_4486 glucosamine/galactosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Dfer_3813 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Dfer_3264 glucosamine/galactosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Dfer_1600 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dfer_5716 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dfer_4559 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dfer_3685 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Dfer_3599 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Dfer_4252 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dfer_3956 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dfer_5333 N-acylglucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D Dfer_3023 dihydrodipicolinate synthetase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D Dfer_4791 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dfer_4788 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Dfer_3363 N-acylneuraminate-9-phosphate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D Dfer_3365 N-acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D Dfer_4626 GHMP kinase K16190 GLCAK; glucuronokinase [EC:2.7.1.43]
D Dfer_0745 glycoside hydrolase family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Dfer_5268 glycoside hydrolase family 39 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Dfer_0650 glycoside hydrolase family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Dfer_3298 coagulation factor 5/8 type domain protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Dfer_4328 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_3960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_4625 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dfer_0064 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_3001 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_2819 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dfer_0465 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dfer_2894 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dfer_2167 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dfer_3361 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Dfer_0063 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dfer_4589 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dfer_1231 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dfer_3304 mannose-6-phosphate isomerase type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dfer_4415 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Dfer_3883 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dfer_3954 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Dfer_4492 Glutamine--scyllo-inositol transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Dfer_3785 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dfer_4603 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Dfer_4602 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Dfer_4600 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Dfer_4599 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dfer_3530 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dfer_4399 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
C 00620 Pyruvate metabolism [PATH:dfe00620]
D Dfer_4994 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dfer_3887 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dfer_3509 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dfer_5625 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_0765 Alcohol dehydrogenase zinc-binding domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Dfer_3378 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dfer_5619 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dfer_4149 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dfer_4148 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dfer_3482 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dfer_0072 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Dfer_2213 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Dfer_1648 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Dfer_5067 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dfer_4226 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dfer_3119 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dfer_0248 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Dfer_4459 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dfer_4539 malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D Dfer_2816 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dfer_3929 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_3670 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dfe00630]
D Dfer_4994 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dfer_4459 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dfer_0554 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Dfer_1208 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dfer_1209 Aconitase B, N-terminal protein K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_3197 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Dfer_2974 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Dfer_5804 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dfer_5573 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dfer_1801 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dfer_4232 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D Dfer_0446 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_0448 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_4670 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_3814 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dfer_4078 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dfer_4550 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_4466 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Dfer_1032 Xylose isomerase domain protein TIM barrel K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Dfer_1033 Xylose isomerase domain protein TIM barrel K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Dfer_3054 Xylose isomerase domain protein TIM barrel K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Dfer_1409 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Dfer_5030 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Dfer_4126 KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dfer_1016 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dfer_3669 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:dfe00640]
D Dfer_4994 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_5619 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dfer_4149 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dfer_4148 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dfer_3482 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dfer_2974 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Dfer_3197 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Dfer_5804 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dfer_2736 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dfer_2911 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dfer_5699 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Dfer_1209 Aconitase B, N-terminal protein K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:dfe00650]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_1891 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dfer_5650 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dfer_3526 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dfer_3970 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dfer_3971 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dfer_3969 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dfer_2213 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Dfer_4398 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Dfer_3920 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Dfer_3681 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dfer_3680 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dfer_1956 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D Dfer_1861 short-chain dehydrogenase/reductase SDR K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:dfe00660]
D Dfer_3681 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dfer_3680 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dfer_1956 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D Dfer_2736 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dfer_2911 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dfer_3672 pyruvate carboxyltransferase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D Dfer_3675 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Dfer_3673 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Dfer_3671 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:dfe00562]
D Dfer_5383 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_1225 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_0819 phosphatidylinositol-specific phospholipase C, X region K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D Dfer_4997 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dfer_3127 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Dfer_4719 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D Dfer_5698 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Dfer_4066 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Dfer_0291 Xylose isomerase domain protein TIM barrel K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D Dfer_3172 Xylose isomerase domain protein TIM barrel K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D Dfer_5694 Xylose isomerase domain protein TIM barrel K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D Dfer_5695 thiamine pyrophosphate protein central region K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D Dfer_5701 Myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D Dfer_5700 PfkB domain protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D Dfer_5699 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Dfer_3869 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dfe00190]
D Dfer_2467 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Dfer_4088 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Dfer_4087 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Dfer_2472 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Dfer_4086 NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Dfer_2473 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Dfer_3733 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Dfer_4085 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Dfer_4084 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Dfer_4083 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Dfer_4082 ferredoxin K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Dfer_3616 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Dfer_4081 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Dfer_4080 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Dfer_4079 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Dfer_3899 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Dfer_4212 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Dfer_3898 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Dfer_4211 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Dfer_3897 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Dfer_3896 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Dfer_3394 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Dfer_4039 NADH-ubiquinone oxidoreductase chain 4L K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D Dfer_4038 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D Dfer_0262 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Dfer_2543 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Dfer_3970 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dfer_3971 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dfer_3969 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dfer_3468 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dfer_3465 conserved hypothetical protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D Dfer_3466 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Dfer_3467 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Dfer_4112 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Dfer_3470 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Dfer_3471 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Dfer_3469 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dfer_1787 cytochrome C oxidase mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Dfer_5323 cytochrome c oxidase, cbb3-type, subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D Dfer_5322 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Dfer_5647 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dfer_5646 cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dfer_5054 PKD domain containing protein K08738 CYC; cytochrome c
D Dfer_1484 PKD domain containing protein K08738 CYC; cytochrome c
D Dfer_2188 cytochrome c class I K08738 CYC; cytochrome c
D Dfer_5332 PKD domain containing protein K08738 CYC; cytochrome c
D Dfer_4632 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Dfer_3763 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Dfer_4631 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Dfer_5022 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Dfer_3764 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Dfer_5025 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Dfer_5023 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Dfer_5121 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Dfer_2540 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_4987 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_0241 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:dfe00680]
D Dfer_0139 formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D Dfer_3814 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dfer_4232 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D Dfer_4373 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dfer_3929 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dfer_4459 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dfer_5696 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_2688 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dfer_4096 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_4571 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Dfer_4016 protein of unknown function DUF224 cysteine-rich region domain protein K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D Dfer_4994 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dfer_4375 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Dfer_0419 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_3130 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4690 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4691 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_5113 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_4445 Phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D Dfer_4549 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:dfe00910]
D Dfer_2061 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Dfer_2062 molybdopterin oxidoreductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D Dfer_2058 nitrite reductase (NAD(P)H), large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D Dfer_2057 nitrite reductase (NAD(P)H), small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D Dfer_0693 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D Dfer_1418 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Dfer_3400 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dfer_2214 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Dfer_0446 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_0448 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_4670 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_5479 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dfer_5478 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Dfer_2930 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Dfer_4665 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:dfe00920]
D Dfer_2617 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dfer_2616 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dfer_4381 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Dfer_2615 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Dfer_1615 oxidoreductase molybdopterin binding K17225 soxC; sulfane dehydrogenase subunit SoxC
D Dfer_1616 cytochrome c class I K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D Dfer_1665 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Dfer_2618 Sulfite reductase (ferredoxin) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D Dfer_1199 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dfer_0057 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_2038 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_0243 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_2669 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dfer_3983 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Dfer_2612 Cystathionine gamma-synthase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dfe00061]
D Dfer_5619 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dfer_4149 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dfer_4148 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dfer_3482 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dfer_5802 acyl carrier protein K02078 acpP; acyl carrier protein
D Dfer_1996 conserved hypothetical protein K02078 acpP; acyl carrier protein
D Dfer_3914 acyl carrier protein K02078 acpP; acyl carrier protein
D Dfer_1990 acyl-carrier protein K02078 acpP; acyl carrier protein
D Dfer_3966 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dfer_0604 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_4151 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_5065 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_5797 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_3948 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_1997 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_1989 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_1992 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_3915 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dfer_2853 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dfer_2588 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_3075 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1998 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_2333 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1291 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1528 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_4758 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1985 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dfer_3015 UDP-3-0-acyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Dfer_3649 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dfer_5690 Acyl-(acyl-carrier-protein) desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D Dfer_3249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:dfe00071]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_3553 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dfer_3526 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dfer_5685 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_2638 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_3249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dfe00561]
D Dfer_5030 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Dfer_0765 Alcohol dehydrogenase zinc-binding domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Dfer_3902 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dfer_2143 carbohydrate kinase FGGY K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dfer_4152 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Dfer_3740 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dfer_5689 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dfer_5180 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dfer_1855 Carbohydrate binding family 6 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:dfe00564]
D Dfer_2864 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Dfer_2005 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Dfer_3740 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dfer_5689 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dfer_5383 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_1225 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_3134 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dfer_5073 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dfer_1764 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dfer_3909 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dfer_3215 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dfer_2668 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dfer_2993 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Dfer_5066 CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Dfer_3556 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
D Dfer_5383 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_1225 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:dfe00600]
D Dfer_5601 Glucan endo-1,6-beta-glucosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D Dfer_4139 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Dfer_3020 Exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_3517 putative O-antigen related protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_1899 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_1900 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_5180 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dfer_1855 Carbohydrate binding family 6 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dfer_3192 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_4327 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_1725 Glycoside hydrolase, family 20, catalytic core K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
D Dfer_3204 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D Dfer_0898 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:dfe00592]
D Dfer_3553 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:dfe01040]
D Dfer_0451 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D Dfer_5690 Acyl-(acyl-carrier-protein) desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D Dfer_5710 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dfe00230]
D Dfer_1953 NUDIX hydrolase K18447 NUDX14; ADP-sugar diphosphatase [EC:3.6.1.21]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_0421 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Dfer_4043 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Dfer_3601 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Dfer_2482 formyl transferase domain protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Dfer_0116 Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Dfer_4180 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Dfer_5765 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Dfer_5764 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Dfer_5481 Phosphoribosylaminoimidazolesuccinocarboxamidesy nthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Dfer_3540 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dfer_3074 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dfer_0324 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dfer_4657 5 nucleotidase deoxy cytosolic type C K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dfer_0405 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dfer_0474 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dfer_4799 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Dfer_3743 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Dfer_4441 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Dfer_4382 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dfer_4379 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Dfer_1432 Xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D Dfer_1535 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D Dfer_1536 molybdopterin dehydrogenase FAD-binding K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D Dfer_1433 molybdopterin dehydrogenase FAD-binding K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D Dfer_1537 (2Fe-2S)-binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D Dfer_1434 (2Fe-2S)-binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D Dfer_2697 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dfer_3827 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Dfer_3539 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dfer_3267 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dfer_3292 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dfer_3321 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Dfer_4577 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Dfer_2808 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Dfer_3926 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Dfer_0645 TPR repeat-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Dfer_1110 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Dfer_4579 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dfer_1263 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dfer_0477 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Dfer_2420 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D Dfer_5735 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Dfer_4092 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dfer_5386 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Dfer_3294 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Dfer_1325 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Dfer_0992 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Dfer_2617 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dfer_2616 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:dfe00240]
D Dfer_2476 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dfer_4372 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dfer_2657 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Dfer_3692 Allantoinase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dfer_2453 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dfer_2441 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dfer_4467 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dfer_3349 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dfer_3350 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dfer_3190 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Dfer_0239 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Dfer_2966 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Dfer_2998 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Dfer_4382 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dfer_2424 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Dfer_1151 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Dfer_5748 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Dfer_4546 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Dfer_0324 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dfer_4657 5 nucleotidase deoxy cytosolic type C K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dfer_0405 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dfer_0474 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dfer_3881 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dfer_4675 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dfer_2676 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dfer_3539 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dfer_3267 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dfer_3292 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dfer_0477 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Dfer_1068 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Dfer_4396 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Dfer_5002 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dfe00250]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_4734 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Dfer_5475 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dfer_0516 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dfer_0246 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dfer_4543 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Dfer_4053 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Dfer_2723 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dfer_0203 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Dfer_4962 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Dfer_4424 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dfer_4178 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dfer_4579 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dfer_1263 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dfer_3540 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dfer_2657 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Dfer_5479 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dfer_5478 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Dfer_3400 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dfer_2214 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Dfer_3807 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Dfer_0446 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_0448 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_4670 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_2476 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dfer_4372 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dfer_4559 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dfer_4043 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dfe00260]
D Dfer_3817 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dfer_3152 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dfer_3732 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dfer_3151 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Dfer_3806 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Dfer_4745 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Dfer_3814 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dfer_4232 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D Dfer_5030 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Dfer_4375 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Dfer_0419 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_3130 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4690 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4691 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_5113 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_3258 Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dfer_4407 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dfer_2278 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5079 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_4078 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dfer_4550 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_4466 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Dfer_4743 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Dfer_5066 CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Dfer_5758 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dfer_3678 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dfer_3798 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Dfer_3795 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:dfe00270]
D Dfer_0057 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_2038 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_0243 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_2804 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dfer_2814 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dfer_3203 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Dfer_5287 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Dfer_4799 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Dfer_3668 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Dfer_4522 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Dfer_2577 Pyridoxal-5'-phosphate-dependent protein beta subunit K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Dfer_3817 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dfer_3152 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dfer_3732 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dfer_2669 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dfer_3983 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Dfer_1094 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Dfer_2612 Cystathionine gamma-synthase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Dfer_3303 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_1199 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dfer_4459 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dfer_5758 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dfer_3252 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Dfer_0419 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_3130 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4690 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4691 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_5113 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:dfe00280]
D Dfer_3303 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_3553 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dfer_2974 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Dfer_3197 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Dfer_5804 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dfer_5699 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Dfer_4398 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Dfer_3920 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dfe00290]
D Dfer_3678 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dfer_3672 pyruvate carboxyltransferase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D Dfer_3675 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Dfer_3673 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Dfer_3671 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Dfer_3681 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dfer_3680 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dfer_3679 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Dfer_3684 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Dfer_3303 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dfer_2723 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dfer_3670 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:dfe00300]
D Dfer_3817 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dfer_3152 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dfer_3732 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dfer_5112 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dfer_3986 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dfer_0209 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Dfer_1045 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Dfer_4419 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Dfer_5091 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Dfer_3140 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Dfer_2967 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dfer_3520 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dfer_4530 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dfer_4988 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:dfe00310]
D Dfer_5034 Aldehyde Dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D Dfer_5753 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_0455 catalytic domain of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_5685 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_2638 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_3598 FAD dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
C 00220 Arginine biosynthesis [PATH:dfe00220]
D Dfer_4424 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dfer_4178 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dfer_5777 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Dfer_0446 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_0448 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_4670 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_2476 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dfer_4372 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dfer_3400 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dfer_2214 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_2723 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dfer_4174 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Dfer_4422 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Dfer_4419 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Dfer_4431 peptidase dimerisation domain protein K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:dfe00330]
D Dfer_3427 Orn/DAP/Arg decarboxylase 2 K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Dfer_2630 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Dfer_2623 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Dfer_1153 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D Dfer_2278 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5079 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_3421 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Dfer_3513 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Dfer_4393 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Dfer_3807 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Dfer_4429 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Dfer_4430 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Dfer_1877 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_4743 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00340 Histidine metabolism [PATH:dfe00340]
D Dfer_1142 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Dfer_4240 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Dfer_4238 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Dfer_4237 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Dfer_4239 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Dfer_2927 histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D Dfer_1138 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2627 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_1141 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Dfer_2278 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5079 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_1252 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:dfe00350]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_1138 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2627 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2107 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Dfer_2106 homogentisate 12-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Dfer_2109 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Dfer_1836 tyrosinase K00505 TYR; tyrosinase [EC:1.14.18.1]
D Dfer_2278 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5079 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_1896 HpcH/HpaI aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D Dfer_1411 2-dehydro-3-deoxyglucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
C 00360 Phenylalanine metabolism [PATH:dfe00360]
D Dfer_2108 aromatic amino acid hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D Dfer_2278 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5079 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5790 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Dfer_3723 oxidoreductase FAD/NAD(P)-binding domain protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D Dfer_4217 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Dfer_1891 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dfer_5650 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_1138 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2627 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2107 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Dfer_4274 FAD dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Dfer_0619 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:dfe00380]
D Dfer_5753 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_0455 catalytic domain of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_5685 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_2638 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_2278 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5079 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dfer_5573 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dfer_1801 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dfer_0619 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dfe00400]
D Dfer_2884 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Dfer_3640 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Dfer_2796 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Dfer_0220 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Dfer_5009 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Dfer_4064 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Dfer_3790 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dfer_3791 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Dfer_3792 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Dfer_3794 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Dfer_3793 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Dfer_3798 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Dfer_3795 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Dfer_2767 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Dfer_4394 DAHP synthetase I/KDSA K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D Dfer_3139 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_1138 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2627 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2108 aromatic amino acid hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:dfe00410]
D Dfer_4555 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Dfer_4557 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Dfer_5699 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:dfe00430]
D Dfer_3938 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_5278 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_0203 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Dfer_4962 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:dfe00440]
D Dfer_5687 GCN5-related N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280]
D Dfer_0013 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:dfe00450]
D Dfer_3983 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Dfer_2804 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dfer_2814 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dfer_5780 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Dfer_2039 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Dfer_0086 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Dfer_0369 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Dfer_0407 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Dfer_2617 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dfer_2616 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dfer_2956 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:dfe00460]
D Dfer_4868 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Dfer_3938 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_5278 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_5475 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dfer_0516 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dfer_0246 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dfer_3814 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dfe00470]
D Dfer_4988 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Dfer_4937 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dfer_3460 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Dfer_3490 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dfer_3890 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Dfer_1026 alanine racemase domain protein K19967 dta; D-threonine aldolase [EC:4.1.2.42]
D Dfer_5091 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Dfer_2967 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dfer_4743 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Dfer_4273 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D Dfer_4271 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D Dfer_4272 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Dfer_2501 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Dfer_4274 FAD dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:dfe00480]
D Dfer_3938 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_5278 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_4282 5-oxoprolinase (ATP-hydrolyzing) K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D Dfer_0436 glutamate--cysteine ligase GCS2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Dfer_2847 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Dfer_4878 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Dfer_1966 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Dfer_3730 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dfer_5181 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Dfer_5182 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dfer_2679 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:dfe00511]
D Dfer_3020 Exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_3517 putative O-antigen related protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_1899 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_1900 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D Dfer_4139 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Dfer_3192 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_4327 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_1725 Glycoside hydrolase, family 20, catalytic core K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_2595 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Dfer_2596 coagulation factor 5/8 type domain protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Dfer_0130 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Dfer_1752 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Dfer_1256 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Dfer_1435 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Dfer_1856 glycoside hydrolase family protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Dfer_1563 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Dfer_2594 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D Dfer_5601 Glucan endo-1,6-beta-glucosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:dfe00540]
D Dfer_3014 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Dfer_3015 UDP-3-0-acyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Dfer_3016 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Dfer_2991 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Dfer_2572 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Dfer_2371 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Dfer_3603 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Dfer_3913 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Dfer_3503 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Dfer_5048 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Dfer_3200 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Dfer_2621 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_5158 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_5665 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_0861 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_3019 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_3872 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Dfer_4000 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Dfer_3426 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Dfer_5594 hydrolase, HAD-superfamily, subfamily IIIA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Dfer_4553 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Dfer_2574 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dfe00541]
D Dfer_4625 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dfer_2894 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dfer_2167 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dfer_3361 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Dfer_0064 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_3001 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dfer_0063 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dfer_4589 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dfer_2896 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dfer_2895 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3000 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3931 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dfer_2965 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dfer_0045 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Dfer_3226 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Dfer_4603 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Dfer_4602 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Dfer_4600 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Dfer_4599 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dfer_3530 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dfer_4399 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dfer_3304 mannose-6-phosphate isomerase type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dfer_4415 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Dfer_3883 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dfer_3954 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Dfer_3785 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dfer_4492 Glutamine--scyllo-inositol transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Dfer_4791 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dfer_4788 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:dfe00550]
D Dfer_4252 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dfer_3956 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dfer_3487 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Dfer_3490 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dfer_3520 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dfer_4937 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dfer_4530 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dfer_4988 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Dfer_4888 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D Dfer_4387 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Dfer_1245 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dfer_0422 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dfer_3519 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dfer_3488 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Dfer_2412 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Dfer_1305 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_5029 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_4764 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_3903 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Dfer_2015 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Dfer_3521 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dfer_5621 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dfer_3782 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:dfe00552]
D Dfer_1245 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dfer_0422 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:dfe00543]
D Dfer_0251 putative colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D Dfer_4684 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Dfer_1635 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Dfer_1037 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Dfer_0057 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_2038 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_0243 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dfer_3333 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
D Dfer_2384 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dfe00730]
D Dfer_2459 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Dfer_4828 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Dfer_5192 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_2049 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_4416 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_2462 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Dfer_3808 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Dfer_2461 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Dfer_4826 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Dfer_2460 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Dfer_4827 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Dfer_3561 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Dfer_1419 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Dfer_3198 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Dfer_1383 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dfer_4449 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Dfer_4092 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dfer_4829 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:dfe00740]
D Dfer_4002 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Dfer_4320 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Dfer_2549 Haloacid dehalogenase domain protein hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D Dfer_3816 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Dfer_2926 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Dfer_1247 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Dfer_4826 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:dfe00750]
D Dfer_0555 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Dfer_4691 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_5113 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_4728 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Dfer_3806 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dfe00760]
D Dfer_4734 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Dfer_4733 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Dfer_3879 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Dfer_4911 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Dfer_0324 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dfer_4657 5 nucleotidase deoxy cytosolic type C K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dfer_0405 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dfer_0474 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dfer_3826 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Dfer_2832 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Dfer_0362 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Dfer_1211 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Dfer_3891 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:dfe00770]
D Dfer_3681 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dfer_3680 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dfer_3679 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Dfer_3684 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Dfer_3775 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Dfer_0751 Ketopantoate reductase ApbA/PanE domain protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Dfer_4557 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Dfer_4140 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Dfer_5203 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Dfer_5212 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Dfer_0236 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Dfer_4929 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Dfer_5788 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Dfer_1066 protein of unknown function DUF479 K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D Dfer_3303 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dfer_4555 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:dfe00780]
D Dfer_1997 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_1989 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_1992 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_3915 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dfer_2853 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dfer_2588 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_3075 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1998 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_2333 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1291 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1528 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_4758 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1985 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dfer_3649 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dfer_3889 aminotransferase class I and II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Dfer_2557 Glycine C-acetyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Dfer_4292 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Dfer_5042 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:dfe00785]
D Dfer_3712 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Dfer_3202 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_3887 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dfer_3509 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dfer_5625 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dfer_5752 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Dfer_5753 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_0455 catalytic domain of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dfer_4078 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dfer_4550 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dfer_4466 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:dfe00790]
D Dfer_0468 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Dfer_1383 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dfer_2889 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Dfer_3568 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Dfer_0223 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Dfer_4255 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Dfer_4811 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Dfer_1048 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Dfer_4002 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Dfer_3375 Chorismate binding-like protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Dfer_3376 conserved hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Dfer_2573 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Dfer_0467 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Dfer_5000 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Dfer_2108 aromatic amino acid hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D Dfer_0088 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Dfer_3065 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Dfer_3066 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Dfer_3067 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Dfer_3069 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Dfer_5190 MobA-like protein-like protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Dfer_2664 molybdopterin-guanine dinucleotide biosynthesis protein B K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:dfe00670]
D Dfer_4255 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Dfer_4811 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Dfer_1212 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Dfer_3814 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dfer_2482 formyl transferase domain protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Dfer_3074 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dfer_4814 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Dfer_4550 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dfer_2804 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dfer_5002 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Dfer_3669 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Dfer_2651 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Dfer_3731 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dfe00860]
D Dfer_4262 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dfer_2489 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Dfer_1148 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dfer_5257 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dfer_1890 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dfer_3652 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Dfer_3276 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Dfer_2913 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Dfer_3425 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Dfer_2369 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Dfer_5318 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Dfer_3754 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Dfer_4417 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Dfer_2619 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Dfer_2059 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Dfer_4780 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Dfer_3468 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dfer_3469 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dfer_5366 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Dfer_5367 cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Dfer_3302 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dfer_5373 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dfer_5369 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Dfer_5371 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Dfer_5374 cobalbumin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Dfer_5376 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Dfer_5375 nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Dfer_5377 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Dfer_5370 aminotransferase class I and II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Dfer_5368 Sigma 54 interacting domain protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Dfer_0006 magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Dfer_2609 Beta-galactosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dfe00130]
D Dfer_4023 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Dfer_5138 Chorismate binding-like protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
D Dfer_1055 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Dfer_1215 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Dfer_1216 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Dfer_5139 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Dfer_2681 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Dfer_1385 NAD-dependent epimerase/dehydratase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Dfer_2107 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dfe00900]
D Dfer_3808 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Dfer_3834 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Dfer_3261 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Dfer_4111 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Dfer_2948 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Dfer_0461 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Dfer_3543 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_2032 isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Dfer_3558 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Dfer_5075 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Dfer_4387 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:dfe00906]
D Dfer_2031 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Dfer_2030 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Dfer_2033 fatty acid hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
D Dfer_5248 Glycosyltransferase 28 domain K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:dfe00907]
D Dfer_4398 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Dfer_3553 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Dfer_2126 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_2127 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_5103 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_5105 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_2935 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dfer_2936 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D Dfer_4738 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Dfer_4979 secreted protein containing FG-GAP repeats K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:dfe00523]
D Dfer_2896 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dfer_2895 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3000 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3931 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dfer_2965 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dfer_0045 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Dfer_3226 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Dfer_5138 Chorismate binding-like protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D Dfer_2895 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3000 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:dfe00946]
D Dfer_4868 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Dfer_2294 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:dfe00311]
D Dfer_1236 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D Dfer_4743 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Dfer_3975 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:dfe00332]
D Dfer_4429 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Dfer_4430 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:dfe00261]
D Dfer_2617 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dfer_2616 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dfer_3817 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dfer_3152 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dfer_3732 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dfer_5112 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dfer_3986 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dfer_0209 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:dfe00521]
D Dfer_4328 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_3960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_4939 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dfer_3127 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Dfer_4997 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dfer_5698 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Dfer_4066 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Dfer_2896 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dfer_2895 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3000 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3931 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dfer_2965 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dfer_0045 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Dfer_3226 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Dfer_4328 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dfer_3960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:dfe00525]
D Dfer_2896 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dfer_2895 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dfer_3000 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:dfe00401]
D Dfer_3139 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_1138 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2627 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Dfer_3790 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dfer_3791 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Dfer_3966 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dfer_2588 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_3075 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1998 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_2333 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1291 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1528 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_4758 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_3649 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Dfer_5802 acyl carrier protein K02078 acpP; acyl carrier protein
D Dfer_1996 conserved hypothetical protein K02078 acpP; acyl carrier protein
D Dfer_3914 acyl carrier protein K02078 acpP; acyl carrier protein
D Dfer_1990 acyl-carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:dfe00999]
D Dfer_3203 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Dfer_4868 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:dfe00362]
D Dfer_3553 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dfer_0290 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Dfer_3526 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dfer_5685 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_2638 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dfer_1891 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dfer_5650 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation [PATH:dfe00364]
D Dfer_3354 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
D Dfer_0139 formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:dfe00361]
D Dfer_3354 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Dfer_0290 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:dfe00623]
D Dfer_3354 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:dfe00622]
D Dfer_0290 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D Dfer_3553 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:dfe00643]
D Dfer_2106 homogentisate 12-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Dfer_2109 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Dfer_0290 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D Dfer_2426 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4750 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4886 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dfe03020]
D Dfer_3449 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dfer_3448 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dfer_4370 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dfer_2433 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dfe03010]
D Dfer_3478 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Dfer_3495 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Dfer_4349 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Dfer_4369 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Dfer_4360 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Dfer_2009 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Dfer_4340 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Dfer_4357 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Dfer_3496 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Dfer_4342 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Dfer_4368 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Dfer_4339 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Dfer_4367 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Dfer_4356 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Dfer_1058 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Dfer_2582 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Dfer_4352 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Dfer_2008 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Dfer_4347 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Dfer_0225 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Dfer_3927 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Dfer_3452 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Dfer_4346 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Dfer_4343 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Dfer_4344 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Dfer_4355 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Dfer_4358 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Dfer_3450 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Dfer_2007 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Dfer_3451 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Dfer_3453 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Dfer_3497 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Dfer_4353 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Dfer_4362 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Dfer_4350 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Dfer_4371 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Dfer_4359 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Dfer_5090 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Dfer_1224 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Dfer_4884 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Dfer_4348 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Dfer_4345 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Dfer_4354 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Dfer_0420 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Dfer_4883 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Dfer_3567 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Dfer_4351 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Dfer_4361 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Dfer_3270 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Dfer_4153 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Dfer_3609 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Dfer_3852 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Dfer_1223 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Dfer_4366 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Dfer_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0028 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0029 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dfe00970]
D Dfer_R0045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dfer_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dfer_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0014 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dfer_R0043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dfer_R0044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dfer_R0020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Dfer_R0031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dfer_R0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dfer_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dfer_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dfer_R0037 tRNA-His K14226 tRNA-His; tRNA His
D Dfer_R0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dfer_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0003 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dfer_R0005 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dfer_R0006 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dfer_R0030 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dfer_R0009 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dfer_R0032 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dfer_R0049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dfer_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dfer_R0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dfer_R0047 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dfer_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dfer_R0017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dfer_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dfer_R0016 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Dfer_R0019 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dfer_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dfer_R0001 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dfer_4262 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dfer_4462 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Dfer_3611 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Dfer_4054 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Dfer_2503 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dfer_5667 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dfer_4606 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dfer_4215 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dfer_4906 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dfer_1221 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dfer_3818 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dfer_3906 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dfer_2956 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dfer_4814 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Dfer_4095 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dfer_2634 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dfer_4664 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dfer_4009 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dfer_2678 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dfer_0217 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dfer_1143 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dfer_4769 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dfer_0010 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dfer_3297 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dfer_0423 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dfe03060]
D Dfer_4363 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Dfer_3455 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Dfer_2731 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dfer_3596 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dfer_4927 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Dfer_1150 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dfer_3555 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dfer_3390 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dfer_R0042 ffs; SRP_RNA K01983 ffs; SRP RNA
D Dfer_3607 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dfer_4461 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Dfer_2323 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Dfer_3888 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Dfer_0210 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dfer_0211 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dfer_1207 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dfer_4392 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dfe04122]
D Dfer_5192 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_2049 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_4416 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_1199 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dfer_2662 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Dfer_3067 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Dfer_3065 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Dfer_3068 thiamineS protein K03636 moaD; sulfur-carrier protein
D Dfer_2463 UBA/THIF-type NAD/FAD binding protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D Dfer_3066 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Dfer_2458 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:dfe03018]
D Dfer_4373 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dfer_1057 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dfer_0542 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_4097 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_5093 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_2862 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_2487 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_0074 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_3715 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dfer_0202 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Dfer_3602 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_3780 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_3877 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_5202 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Dfer_0007 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_1226 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dfer_2734 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dfer_2540 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_4987 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_0241 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_2415 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dfe03030]
D Dfer_1154 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_5151 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_3900 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_4916 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_0427 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_4930 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dfer_3272 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dfer_1065 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dfer_3720 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_5495 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_1073 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Dfer_3370 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Dfer_4439 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4108 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Dfer_5493 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_5118 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dfer_3847 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Dfer_1096 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dfer_5111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dfe03410]
D Dfer_3627 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dfer_0198 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Dfer_4436 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Dfer_0134 DNA glycosylase/AP lyase, H2TH DNA-binding K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D Dfer_1064 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dfer_3910 methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Dfer_2159 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dfer_0913 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dfer_2986 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dfer_1096 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dfer_4050 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dfer_5111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dfe03420]
D Dfer_3695 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Dfer_0838 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dfer_3862 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dfer_3281 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dfer_4654 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Dfer_5031 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Dfer_3788 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dfer_0930 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dfer_1096 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dfer_5111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:dfe03430]
D Dfer_2983 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Dfer_3819 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D Dfer_5060 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Dfer_3811 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Dfer_3788 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dfer_0930 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dfer_4050 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dfer_4439 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4108 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Dfer_5493 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4916 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_0427 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_3720 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_5495 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_4930 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dfer_1065 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dfer_3272 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dfer_1154 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_5151 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_3900 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_5111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dfer_5496 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:dfe03440]
D Dfer_4050 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dfer_4439 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4108 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Dfer_5493 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_3886 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Dfer_4044 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Dfer_2905 recombination protein RecR K06187 recR; recombination protein RecR
D Dfer_0005 recA protein K03553 recA; recombination protein RecA
D Dfer_1096 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dfer_4464 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Dfer_3690 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Dfer_2024 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Dfer_4892 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dfer_4916 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_0427 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_3720 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_5495 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_4930 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dfer_1065 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dfer_3272 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dfer_1154 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_5151 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_3900 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_3377 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:dfe03450]
D Dfer_3084 Ku protein K10979 ku; DNA end-binding protein Ku
D Dfer_3085 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Dfer_0365 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dfe02010]
D Dfer_3141 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Dfer_3142 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Dfer_2971 ABC transporter related K05776 modF; molybdate transport system ATP-binding protein
D Dfer_1250 binding-protein-dependent transport systems inner membrane component K05845 opuC; osmoprotectant transport system substrate-binding protein
D Dfer_1249 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Dfer_0188 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Dfer_3636 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Dfer_3962 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Dfer_0190 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Dfer_3963 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Dfer_0189 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Dfer_2124 Monosaccharide-transporting ATPase K10439 rbsB; ribose transport system substrate-binding protein
D Dfer_2121 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Dfer_2122 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Dfer_3164 Monosaccharide-transporting ATPase K17213 K17213; inositol transport system substrate-binding protein
D Dfer_3165 Monosaccharide-transporting ATPase K17214 K17214; inositol transport system permease protein
D Dfer_3166 ABC transporter related K17215 K17215; inositol transport system ATP-binding protein
D Dfer_2771 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Dfer_2772 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Dfer_4877 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Dfer_2833 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Dfer_2735 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Dfer_5083 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Dfer_5084 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Dfer_1059 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Dfer_4679 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Dfer_4049 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dfer_3751 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dfer_0697 nitrous-oxide metabolic protein NosY K19341 nosY; Cu-processing system permease protein
D Dfer_0696 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein
D Dfer_1243 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Dfer_5046 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Dfer_0316 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Dfer_4923 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dfer_4763 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dfer_4910 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:dfe03070]
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3596 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dfer_3455 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Dfer_2731 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dfer_4363 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Dfer_4927 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Dfer_1150 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dfer_3555 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dfer_3607 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dfer_3390 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dfer_4461 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Dfer_2323 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Dfer_3888 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Dfer_3589 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dfe02020]
D Dfer_3401 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_4094 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_5351 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_3565 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_5580 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_4011 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Dfer_1383 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dfer_3918 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Dfer_0381 osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dfer_0375 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Dfer_0376 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Dfer_0379 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Dfer_3469 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dfer_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Dfer_2827 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Dfer_5304 TonB-dependent receptor K19611 fepA; ferric enterobactin receptor
D Dfer_5196 TonB-dependent receptor K19611 fepA; ferric enterobactin receptor
D Dfer_2748 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Dfer_5299 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Dfer_1005 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Dfer_4502 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dfer_1698 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dfer_0897 two component transcriptional regulator, LuxR family K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D Dfer_0608 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_5301 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_4796 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_2335 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_2192 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1276 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1284 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1285 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1286 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_2191 transcriptional regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D Dfer_0446 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_0448 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_4670 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_3238 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Dfer_5458 putative two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Dfer_2749 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_3533 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Dfer_2750 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Dfer_0382 PAS/PAC sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D Dfer_0391 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dfer_1134 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dfer_5176 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_5571 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_5177 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5570 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_0390 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_1133 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_3185 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Dfer_0392 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Dfer_1662 two component transcriptional regulator, LuxR family K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D Dfer_5054 PKD domain containing protein K08738 CYC; cytochrome c
D Dfer_1484 PKD domain containing protein K08738 CYC; cytochrome c
D Dfer_2188 cytochrome c class I K08738 CYC; cytochrome c
D Dfer_5332 PKD domain containing protein K08738 CYC; cytochrome c
D Dfer_1787 cytochrome C oxidase mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Dfer_5323 cytochrome c oxidase, cbb3-type, subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D Dfer_5322 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Dfer_5647 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dfer_5646 cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0066 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Dfer_3362 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dfer_0065 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dfer_4791 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dfer_0486 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Dfer_0289 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_5683 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_4512 Carbohydrate binding family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_2105 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_3003 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dfer_2436 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_4122 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2829 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_3706 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_5309 transcriptional regulator, LuxR family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_5328 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0716 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_5658 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2265 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1625 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0776 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1727 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1495 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2264 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1382 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1768 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0591 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_4715 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0642 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1586 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0715 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_0592 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_0678 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_0641 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_0775 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2830 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_4694 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_4707 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_4716 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_5329 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_3232 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_3705 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_5659 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2303 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2117 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1745 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1585 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1624 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1728 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1846 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2401 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2437 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2450 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1792 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1102 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1461 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1414 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1422 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1566 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2263 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2266 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1703 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2206 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1767 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2220 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_2228 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1658 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1381 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Dfer_1496 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dfe02024]
D Dfer_3790 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dfer_3791 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Dfer_3249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dfer_2043 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Dfer_4320 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Dfer_4040 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Dfer_4640 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_5535 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_1912 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_2175 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0808 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0980 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_4910 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Dfer_4909 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Dfer_1150 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dfer_3596 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dfer_3455 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Dfer_2731 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dfer_4363 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Dfer_4927 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Dfer_3555 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dfer_3607 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dfer_3390 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dfer_5383 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_1225 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:dfe02030]
D Dfer_2124 Monosaccharide-transporting ATPase K10439 rbsB; ribose transport system substrate-binding protein
D Dfer_5177 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5570 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_0390 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_1133 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5176 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_5571 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_0391 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dfer_1134 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dfer_2377 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:dfe02040]
D Dfer_2377 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Dfer_1056 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Dfer_2750 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Dfer_4373 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:dfe04980]
D Dfer_3302 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dfer_5373 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dfer_3946 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D Dfer_5804 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dfer_2804 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:dfe01501]
D Dfer_2708 beta-lactamase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dfer_3722 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3381 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Dfer_0288 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_1288 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3382 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Dfer_4940 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3721 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_1287 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_3380 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_0287 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_0982 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_2173 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5537 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_4642 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3208 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5137 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1161 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1001 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3207 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Dfer_4640 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_5535 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_1912 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_2175 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0808 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0980 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1305 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_5029 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_4764 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_2015 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Dfer_3521 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dfer_0562 beta-lactamase domain protein K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
D Dfer_1371 Beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:dfe01502]
D Dfer_2827 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Dfer_4937 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dfer_4988 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Dfer_4530 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dfer_3519 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dfer_3488 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dfe01503]
D Dfer_3635 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dfer_3645 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dfer_3918 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Dfer_0982 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_2173 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5537 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_4642 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3208 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5137 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1161 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1001 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3207 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3014 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dfe01000]
C 01001 Protein kinases [BR:dfe01001]
D Dfer_2925 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Dfer_1673 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Dfer_3362 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dfer_0065 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dfer_0165 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Dfer_3401 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_4094 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_5351 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_3565 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_5580 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_0381 osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dfer_4503 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Dfer_1697 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Dfer_2748 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Dfer_5299 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Dfer_1005 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Dfer_0734 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0598 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0601 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0602 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0757 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_1315 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_4385 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_5361 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_5404 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_3279 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_1474 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0799 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_2254 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_2255 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0857 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0382 PAS/PAC sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D Dfer_1112 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Dfer_3185 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Dfer_5459 signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D Dfer_5597 Diverse 7TM receptor transmembrane region K20971 ladS; two-component system, sensor histidine kinase LadS
D Dfer_2391 Diverse 7TM receptor transmembrane region K20971 ladS; two-component system, sensor histidine kinase LadS
D Dfer_0345 histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:dfe01009]
D Dfer_4522 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_5199 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:dfe01002]
D Dfer_1207 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dfer_4392 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dfer_2697 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dfer_4910 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Dfer_2940 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC
D Dfer_4043 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Dfer_5479 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dfer_4559 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dfer_4543 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Dfer_2970 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Dfer_3137 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Dfer_2171 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Dfer_2995 Abortive infection protein K07052 K07052; CAAX protease family protein
D Dfer_4878 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Dfer_1966 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Dfer_3532 oligoendopeptidase, M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Dfer_4331 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D Dfer_2827 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Dfer_4913 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dfer_3008 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dfer_4248 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dfer_2951 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dfer_2703 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dfer_2704 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dfer_2847 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Dfer_0651 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_1888 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_1025 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_5117 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Dfer_4508 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dfer_3924 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dfer_3048 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dfer_1965 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Dfer_4364 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Dfer_2876 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Dfer_1440 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Dfer_1367 Glutamate carboxypeptidase II K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21]
D Dfer_3904 peptidase M28 K00683 QPCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D Dfer_5040 ATP-dependent metalloprotease FtsH K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D Dfer_4131 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Dfer_3722 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3381 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Dfer_0288 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_1288 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3382 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Dfer_4940 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_2081 hypothetical protein K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D Dfer_3571 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D Dfer_3918 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Dfer_4608 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D Dfer_3655 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Dfer_1095 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D Dfer_5621 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dfer_3782 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dfer_4574 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Dfer_4129 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Dfer_0210 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dfer_0211 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dfer_1877 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Dfer_3850 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dfer_3921 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dfer_4634 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dfer_3420 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dfer_1696 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dfer_3975 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Dfer_2800 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D Dfer_0514 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D Dfer_1621 peptidase S51 dipeptidase E K13282 cphB; cyanophycinase [EC:3.4.15.6]
D Dfer_3810 Rhomboid family protein K07059 K07059; rhomboid family protein
D Dfer_3809 Rhomboid family protein K07059 K07059; rhomboid family protein
D Dfer_2712 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Dfer_5507 peptidase U35 phage prohead HK97 K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Dfer_5624 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Dfer_0516 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dfer_0246 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dfer_3938 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_5278 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dfer_2097 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D Dfer_2099 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D Dfer_3542 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:dfe01003]
D Dfer_3842 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Dfer_5100 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Dfer_3836 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Dfer_3735 Glycogen (starch) synthase K00693 GYS; glycogen synthase [EC:2.4.1.11]
D Dfer_4558 Starch synthase catalytic domain protein K00703 glgA; starch synthase [EC:2.4.1.21]
D Dfer_2412 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Dfer_3903 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Dfer_1305 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_5029 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_4764 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_5248 Glycosyltransferase 28 domain K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]
D Dfer_1021 trehalose-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dfe01005]
D Dfer_3014 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Dfer_2572 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Dfer_3015 UDP-3-0-acyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Dfer_3016 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Dfer_2991 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Dfer_2371 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Dfer_2621 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_5158 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_5665 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_0861 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_3019 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dfer_3200 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Dfer_3913 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Dfer_5048 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Dfer_3503 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Dfer_3603 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Dfer_4000 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Dfer_4553 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Dfer_3872 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Dfer_3426 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Dfer_5594 hydrolase, HAD-superfamily, subfamily IIIA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Dfer_2574 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Dfer_4683 Ribonuclease III K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Dfer_5104 NAD-dependent epimerase/dehydratase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Dfer_4680 Ribonuclease III K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Dfer_3529 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dfe01011]
D Dfer_4252 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dfer_3956 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dfer_3487 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Dfer_3490 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dfer_3520 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dfer_4988 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Dfer_4937 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dfer_3460 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Dfer_2712 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Dfer_3519 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dfer_3488 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Dfer_1245 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dfer_0422 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dfer_1305 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_5029 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_4764 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dfer_3903 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Dfer_2015 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Dfer_3521 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dfer_5621 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dfer_3782 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dfer_2412 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Dfer_3137 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Dfer_2171 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Dfer_2827 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Dfer_4508 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dfer_3924 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dfer_3048 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dfer_4463 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Dfer_2898 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Dfer_3070 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Dfer_5013 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Dfer_4774 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Dfer_3635 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dfer_3645 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:dfe01004]
D Dfer_3966 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dfer_0604 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_4151 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_5065 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_5797 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_3948 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dfer_1997 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_1989 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_1992 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dfer_3915 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dfer_2853 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dfer_2588 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_3075 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1998 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_2333 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1291 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1528 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_4758 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dfer_1985 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dfer_3015 UDP-3-0-acyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Dfer_3649 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dfer_5710 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Dfer_0451 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D Dfer_5690 Acyl-(acyl-carrier-protein) desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D Dfer_3204 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D Dfer_0898 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D Dfer_4994 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dfer_3920 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Dfer_3249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dfer_4152 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Dfer_3740 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dfer_5689 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:dfe01008]
D Dfer_4738 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Dfer_4979 secreted protein containing FG-GAP repeats K21162 sgcE4; enediyne biosynthesis protein E4
C 01006 Prenyltransferases [BR:dfe01006]
D Dfer_3558 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Dfer_5075 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Dfer_4387 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Dfer_2031 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Dfer_0552 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dfer_2922 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dfer_2681 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Dfer_3468 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:dfe01007]
D Dfer_4262 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dfer_2503 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dfer_3297 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dfer_0423 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dfer_3906 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dfer_2678 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dfer_2956 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dfer_4664 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dfer_4095 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dfer_2634 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dfer_4009 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dfer_4606 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dfer_4215 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dfer_1143 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dfer_4906 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dfer_3818 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dfer_0217 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dfer_1221 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dfer_5667 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dfer_4769 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dfer_0010 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dfer_3724 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dfer_2723 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dfer_2834 aminotransferase class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D Dfer_3140 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Dfer_1138 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_2627 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dfer_3258 Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dfer_4407 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dfer_3889 aminotransferase class I and II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Dfer_2557 Glycine C-acetyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Dfer_3421 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Dfer_4419 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Dfer_1148 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dfer_5257 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dfer_1890 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dfer_3303 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dfer_4691 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_5113 aminotransferase class V K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dfer_4492 Glutamine--scyllo-inositol transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:dfe00194]
D Dfer_4136 Rieske (2Fe-2S) domain protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D Dfer_3764 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Dfer_3763 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Dfer_4631 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Dfer_4632 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Dfer_5022 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Dfer_5023 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Dfer_5025 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dfe03000]
D Dfer_1456 transcriptional regulator, AraC family K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D Dfer_0388 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_0769 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_4762 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_5451 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_5452 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1751 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1737 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1738 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1834 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1116 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1158 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_1426 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_2197 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_2210 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_0841 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Dfer_3677 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_5462 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_5555 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_1515 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_0924 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_0900 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_0914 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D Dfer_0654 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Dfer_0549 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Dfer_5655 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Dfer_0142 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Dfer_1716 transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D Dfer_3432 transcriptional regulator, DeoR family K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D Dfer_1009 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_1274 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_2601 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_2837 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_4330 transcriptional regulator, AraC family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_4494 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_4879 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_4307 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_5702 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_4121 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dfer_3266 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Dfer_1596 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Dfer_3026 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Dfer_1191 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dfer_2235 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dfer_3314 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dfer_3410 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Dfer_2110 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Dfer_2332 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Dfer_5148 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Dfer_0204 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_4405 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_3786 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_2044 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_2805 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_3525 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Dfer_2029 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D Dfer_4566 Fur family transcriptional regulator protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Dfer_4578 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Dfer_5316 transcriptional regulator, Crp/Fnr family K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
D Dfer_1119 putative transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Dfer_1932 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Dfer_0850 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Dfer_0907 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Dfer_2636 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D Dfer_4256 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Dfer_0141 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Dfer_5149 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Dfer_1451 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Dfer_1557 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Dfer_4678 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Dfer_3721 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_1287 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_3380 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_0287 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_5042 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Dfer_1719 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Dfer_0091 putative plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_3978 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_4146 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_4425 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_5282 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_5530 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_2132 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_5460 sigma54 specific transcriptional regulator, Fis family K12146 hyfR; hydrogenase-4 transcriptional activator
D Dfer_1742 sigma54 specific transcriptional regulator, Fis family K12146 hyfR; hydrogenase-4 transcriptional activator
D Dfer_5444 sigma54 specific transcriptional regulator, Fis family K15836 fhlA; formate hydrogenlyase transcriptional activator
D Dfer_1739 Sigma 54 interacting domain protein K15836 fhlA; formate hydrogenlyase transcriptional activator
D Dfer_0903 sigma54 specific transcriptional regulator, Fis family K15836 fhlA; formate hydrogenlyase transcriptional activator
D Dfer_5342 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Dfer_0207 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dfer_4829 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Dfer_2824 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Dfer_3554 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Dfer_1645 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D Dfer_4675 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dfer_2676 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dfer_4074 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Dfer_3508 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:dfe03021]
D Dfer_4370 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dfer_3449 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dfer_3448 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dfer_2433 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D Dfer_1056 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Dfer_5465 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dfer_1125 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dfer_4471 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dfer_3493 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dfer_2934 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dfer_2436 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_4122 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2829 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_3706 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_5309 transcriptional regulator, LuxR family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_5328 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0716 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_5658 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2265 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1625 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0776 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1727 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1495 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2264 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1382 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1768 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0591 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_4715 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_0642 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_1586 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dfer_2750 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Dfer_0033 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Dfer_4924 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Dfer_3454 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Dfer_1673 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Dfer_1672 negative regulator of sigma-B K17762 rsbS; rsbT antagonist protein RsbS
D Dfer_1671 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D Dfer_0183 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Dfer_0182 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Dfer_3508 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Dfer_4815 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Dfer_5202 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dfe03019]
D Dfer_4433 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Dfer_3916 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dfer_0007 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Dfer_3715 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dfer_0542 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_4097 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_5093 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_2862 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_2487 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_0074 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dfer_0202 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Dfer_3602 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_3780 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_3877 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_4373 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dfer_1057 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dfer_5202 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Dfer_3102 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dfer_1226 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dfer_2734 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dfer_2540 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_4987 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_0241 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dfer_2415 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:dfe03011]
D Dfer_3478 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Dfer_3495 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Dfer_4349 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Dfer_4369 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Dfer_4360 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Dfer_2009 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Dfer_4340 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Dfer_4357 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Dfer_3496 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Dfer_4342 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Dfer_4368 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Dfer_4339 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Dfer_4367 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Dfer_4356 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Dfer_1058 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Dfer_2582 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Dfer_4352 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Dfer_2008 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Dfer_4347 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Dfer_0225 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Dfer_3927 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Dfer_3452 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Dfer_4346 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Dfer_4343 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Dfer_4344 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Dfer_4355 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Dfer_4358 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Dfer_2007 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Dfer_3451 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Dfer_3453 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Dfer_3450 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Dfer_3497 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Dfer_4353 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Dfer_4362 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Dfer_4350 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Dfer_4371 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Dfer_4359 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Dfer_5090 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Dfer_1224 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Dfer_4884 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Dfer_4348 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Dfer_4345 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Dfer_4354 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Dfer_4883 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Dfer_3567 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Dfer_4351 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Dfer_4361 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Dfer_3270 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Dfer_4153 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Dfer_3609 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Dfer_3852 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Dfer_1223 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Dfer_4366 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Dfer_0420 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Dfer_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0029 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0028 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dfe03009]
D Dfer_3916 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dfer_3080 type III restriction protein res subunit K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D Dfer_3856 GTP-binding protein Era K03595 era; GTPase
D Dfer_4091 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Dfer_3508 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Dfer_0033 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Dfer_4924 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Dfer_3454 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Dfer_5760 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Dfer_1088 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Dfer_0449 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Dfer_3357 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Dfer_3523 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Dfer_5069 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Dfer_4999 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Dfer_2661 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Dfer_1219 oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Dfer_0401 putative RNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D Dfer_4731 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Dfer_1077 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Dfer_3919 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Dfer_3759 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Dfer_2578 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Dfer_3776 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Dfer_2984 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Dfer_3319 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Dfer_1235 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D Dfer_3274 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D Dfer_2581 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Dfer_3605 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Dfer_3738 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Dfer_4433 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Dfer_4051 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Dfer_0202 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Dfer_1419 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Dfer_3198 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Dfer_3857 small GTP-binding protein K03977 engA; GTPase
D Dfer_3121 GTP-binding proten HflX K03665 hflX; GTPase
D Dfer_0231 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Dfer_4577 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Dfer_4876 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Dfer_0034 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Dfer_5041 iojap-like protein K09710 ybeB; ribosome-associated protein
D Dfer_3801 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Dfer_3255 putative sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Dfer_4776 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Dfer_4154 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:dfe03016]
D Dfer_3725 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Dfer_4262 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dfer_0217 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dfer_4664 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dfer_2634 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dfer_2956 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dfer_2503 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dfer_2678 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dfer_4009 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dfer_4606 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dfer_5667 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dfer_4215 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dfer_4906 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dfer_1221 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dfer_3818 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dfer_3906 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dfer_4095 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dfer_1143 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dfer_4769 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dfer_0010 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dfer_3297 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dfer_0423 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dfer_5755 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Dfer_4584 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Dfer_1047 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Dfer_2502 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Dfer_1246 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Dfer_5192 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_2049 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_4416 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_0231 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Dfer_0552 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dfer_2922 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dfer_0089 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Dfer_3802 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Dfer_3851 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Dfer_4119 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA
D Dfer_4204 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Dfer_1916 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Dfer_2996 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Dfer_2727 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Dfer_0444 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Dfer_2545 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Dfer_2580 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Dfer_5119 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Dfer_2725 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Dfer_0076 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D Dfer_2662 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Dfer_3150 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Dfer_5062 HesB/YadR/YfhF-family protein K13628 iscA; iron-sulfur cluster assembly protein
D Dfer_2373 tRNA-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D Dfer_3260 S-adenosylmethionine/tRNA-ribosyltransferase-iso merase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Dfer_3300 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Dfer_2573 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Dfer_0467 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Dfer_0088 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Dfer_4975 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Dfer_3359 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Dfer_5217 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Dfer_3849 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Dfer_3012 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Dfer_4961 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Dfer_3715 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dfer_1057 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dfer_2468 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:dfe03012]
D Dfer_3941 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D Dfer_0032 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Dfer_1222 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Dfer_4779 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Dfer_0741 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Dfer_3080 type III restriction protein res subunit K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D Dfer_3494 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Dfer_3456 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dfer_4341 translation elongation factor G K02355 fusA; elongation factor G
D Dfer_4104 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Dfer_2999 ribosome recycling factor K02838 frr; ribosome recycling factor
D Dfer_4319 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Dfer_2675 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Dfer_4365 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Dfer_4150 translation elongation factor P K02356 efp; elongation factor P
D Dfer_3994 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D Dfer_5122 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Dfer_4614 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:dfe03110]
D Dfer_2969 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Dfer_3576 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Dfer_5019 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Dfer_4573 Sigma 54 interacting domain protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Dfer_4809 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Dfer_5199 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D Dfer_1226 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dfer_1532 molecular chaperone, HSP70 class K04046 yegD; hypothetical chaperone protein
D Dfer_2734 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dfer_4973 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Dfer_0544 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Dfer_4974 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Dfer_3917 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Dfer_4951 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Dfer_0836 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Dfer_2733 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Dfer_4685 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Dfer_3918 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Dfer_5040 ATP-dependent metalloprotease FtsH K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D Dfer_5025 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Dfer_3192 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_4327 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_1725 Glycoside hydrolase, family 20, catalytic core K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dfer_3071 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Dfer_4724 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Dfer_4380 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Dfer_4633 peptidylprolyl isomerase FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D Dfer_1067 peptidylprolyl isomerase (FKBP-type peptidyl-prolyl cis-trans isomerase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Dfer_2498 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Dfer_2499 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Dfer_0428 thioredoxin K03671 TXN; thioredoxin
D Dfer_2784 thioredoxin K03671 TXN; thioredoxin
D Dfer_3953 Thioredoxin domain K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:dfe04131]
D Dfer_4382 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dfer_1046 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dfer_3378 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dfer_5199 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D Dfer_0030 permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:dfe04121]
C 03051 Proteasome [BR:dfe03051]
D Dfer_5199 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:dfe03032]
D Dfer_5118 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dfer_4435 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dfer_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Dfer_1073 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Dfer_3370 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Dfer_4439 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4108 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Dfer_5493 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4916 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_0427 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_3720 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_5495 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_1065 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dfer_3272 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dfer_1154 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_5151 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_3900 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_4930 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dfer_3847 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Dfer_1096 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dfer_5111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dfer_5496 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Dfer_1029 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Dfer_4986 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Dfer_2645 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Dfer_2768 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Dfer_3186 DNA topoisomerase, type I, putative K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dfer_1210 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dfer_0272 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dfe03036]
D Dfer_3916 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dfer_4435 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dfer_0544 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Dfer_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Dfer_0327 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Dfer_2946 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Dfer_0204 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_4405 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_3786 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_2044 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_2805 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dfer_3485 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Dfer_5046 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Dfer_3521 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dfer_3189 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Dfer_3486 conserved hypothetical protein K03589 ftsQ; cell division protein FtsQ
D Dfer_3489 cell cycle protein K03588 ftsW; cell division protein FtsW
D Dfer_1243 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Dfer_3484 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Dfer_0008 hypothetical protein K09888 zapA; cell division protein ZapA
D Dfer_3635 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dfer_3645 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dfer_0982 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_2173 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5537 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_4642 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3208 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5137 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1161 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1001 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_2890 DivIVA family protein K04074 divIVA; cell division initiation protein
D Dfer_3832 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Dfer_3831 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Dfer_2014 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Dfer_0206 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Dfer_1176 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Dfer_0207 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dfer_2645 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Dfer_2768 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Dfer_3802 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Dfer_3357 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Dfer_3928 integrase family protein K03733 xerC; integrase/recombinase XerC
D Dfer_2797 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Dfer_5173 integrase family protein K04763 xerD; integrase/recombinase XerD
D Dfer_4935 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Dfer_3952 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:dfe03400]
D Dfer_5558 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Dfer_4249 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Dfer_0198 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Dfer_4436 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Dfer_3627 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dfer_3691 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_0234 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_0588 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_5114 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_3873 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_2189 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_2399 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_2250 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dfer_0549 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Dfer_1064 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dfer_3910 methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Dfer_0134 DNA glycosylase/AP lyase, H2TH DNA-binding K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D Dfer_2159 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dfer_0913 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dfer_2986 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dfer_3087 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Dfer_4050 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dfer_5111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dfer_1096 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dfer_0838 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dfer_3862 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dfer_3281 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dfer_4654 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Dfer_5031 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Dfer_3788 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dfer_0930 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dfer_3449 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dfer_3448 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dfer_4370 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dfer_2433 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D Dfer_3695 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Dfer_2983 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Dfer_3819 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D Dfer_5060 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Dfer_3811 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Dfer_4916 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_0427 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dfer_3720 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_5495 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dfer_1065 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dfer_3272 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dfer_1154 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_5151 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_3900 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dfer_4930 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dfer_4439 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4108 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Dfer_5493 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_5496 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Dfer_0005 recA protein K03553 recA; recombination protein RecA
D Dfer_4464 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Dfer_3690 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Dfer_2024 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Dfer_3377 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Dfer_3418 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Dfer_3506 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Dfer_4772 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Dfer_3886 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Dfer_4892 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dfer_4044 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Dfer_2905 recombination protein RecR K06187 recR; recombination protein RecR
D Dfer_5209 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Dfer_4413 protein of unknown function DUF853 NPT hydrolase putative K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Dfer_3084 Ku protein K10979 ku; DNA end-binding protein Ku
D Dfer_3085 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Dfer_0365 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Dfer_1029 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Dfer_4986 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Dfer_3186 DNA topoisomerase, type I, putative K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dfer_1210 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dfer_4435 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dfer_3602 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_3780 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_3877 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dfer_4919 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Dfer_0318 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Dfer_2343 conserved hypothetical protein K14160 imuA; protein ImuA
D Dfer_5399 conserved hypothetical protein K14160 imuA; protein ImuA
D Dfer_2344 nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB
D Dfer_5394 nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB
D Dfer_2345 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Dfer_5393 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Dfer_3293 regulatory protein RecX K03565 recX; regulatory protein
D Dfer_5653 PHP domain protein K02347 polX; DNA polymerase (family X)
D Dfer_3332 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Dfer_3539 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dfer_3267 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dfer_3292 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dfer_4381 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:dfe03029]
D Dfer_0032 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Dfer_1222 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Dfer_3494 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Dfer_3456 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dfer_4341 translation elongation factor G K02355 fusA; elongation factor G
D Dfer_3856 GTP-binding protein Era K03595 era; GTPase
D Dfer_3297 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dfer_2634 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dfer_4606 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dfer_4906 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dfer_2678 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dfer_4462 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Dfer_3611 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Dfer_4054 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Dfer_4439 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4108 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Dfer_5493 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dfer_4388 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Dfer_1226 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dfer_4974 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Dfer_2734 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dfer_2733 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Dfer_4685 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Dfer_4973 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Dfer_5192 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_2049 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_4416 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_4882 nitrogen-fixing NifU domain protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D Dfer_4935 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Dfer_3468 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dfer_3469 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dfer_1150 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dfer_5207 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Dfer_5562 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Dfer_5199 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dfe02000]
D Dfer_0316 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Dfer_4923 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dfer_4763 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dfer_5250 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dfer_1061 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dfer_0068 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dfer_2164 ABC transporter transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dfer_2165 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dfer_1690 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dfer_4910 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Dfer_4068 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Dfer_3141 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Dfer_3142 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Dfer_2971 ABC transporter related K05776 modF; molybdate transport system ATP-binding protein
D Dfer_1250 binding-protein-dependent transport systems inner membrane component K05845 opuC; osmoprotectant transport system substrate-binding protein
D Dfer_1249 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Dfer_2124 Monosaccharide-transporting ATPase K10439 rbsB; ribose transport system substrate-binding protein
D Dfer_2121 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Dfer_2122 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Dfer_3164 Monosaccharide-transporting ATPase K17213 K17213; inositol transport system substrate-binding protein
D Dfer_3165 Monosaccharide-transporting ATPase K17214 K17214; inositol transport system permease protein
D Dfer_3166 ABC transporter related K17215 K17215; inositol transport system ATP-binding protein
D Dfer_0188 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Dfer_3636 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Dfer_3962 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Dfer_0190 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Dfer_3963 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Dfer_0189 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Dfer_3535 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D Dfer_3536 transport system permease protein K25133 hmuU; heme transport system permease protein
D Dfer_3537 ABC transporter related K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D Dfer_5372 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Dfer_3336 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Dfer_3337 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Dfer_3338 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Dfer_2771 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Dfer_2772 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Dfer_1059 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Dfer_4679 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Dfer_4049 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dfer_3751 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dfer_0697 nitrous-oxide metabolic protein NosY K19341 nosY; Cu-processing system permease protein
D Dfer_0696 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein
D Dfer_4470 ABC transporter permease; gliding motility-associated protein K25151 gldF; gliding motility-associated transport system permease protein
D Dfer_4207 ABC transporter related K25152 gldA; gliding motility-associated transport system ATP-binding protein
D Dfer_3719 gliding motility protein, ABC-related protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D Dfer_5641 ABC-2 type transporter K25180 ybhR; drug efflux transport system permease protein
D Dfer_5640 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein
D Dfer_5638 ABC transporter related K25182 ybhF; drug efflux transport system ATP-binding protein
D Dfer_5639 ABC transporter related K25182 ybhF; drug efflux transport system ATP-binding protein
D Dfer_5637 conserved hypothetical protein K25183 ybhG; membrane fusion protein YbhG
D Dfer_4877 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Dfer_2833 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Dfer_2735 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Dfer_5083 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Dfer_5084 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Dfer_1243 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Dfer_5046 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Dfer_0684 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dfer_4966 ABC transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dfer_0683 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dfer_5801 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dfer_0682 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dfer_4965 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dfer_5189 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dfer_2592 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dfer_5800 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dfer_2685 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dfer_5607 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5612 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1539 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_3939 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4840 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4857 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_3618 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1120 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_0140 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_0658 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5420 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5424 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5431 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4899 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4905 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4843 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4844 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4847 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4848 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4849 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4850 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4858 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4859 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_4861 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5545 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5613 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_2089 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1753 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1804 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1806 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1450 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_2247 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_1651 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dfer_5611 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dfer_5709 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dfer_4838 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dfer_3760 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dfer_4898 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dfer_3619 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dfer_5778 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Dfer_0043 Na+/solute symporter K14388 SLC5A8_12; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12
D Dfer_4668 Na+-dependent transporter-like protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D Dfer_2515 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Dfer_3120 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Dfer_2102 sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D Dfer_5334 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Dfer_5644 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Dfer_5715 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Dfer_0466 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Dfer_4488 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Dfer_3990 General substrate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D Dfer_0404 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Dfer_2843 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Dfer_1017 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Dfer_2061 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Dfer_3081 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dfer_1982 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dfer_1509 major facilitator superfamily MFS_1 K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dfer_2019 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Dfer_1259 major facilitator superfamily MFS_1 K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein
D Dfer_3923 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Dfer_0030 permease K06902 UMF1; MFS transporter, UMF1 family
D Dfer_3541 major intrinsic protein K02440 glpF; glycerol uptake facilitator
D Dfer_0443 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Dfer_0158 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Dfer_3846 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Dfer_5483 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Dfer_5407 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Dfer_5786 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D Dfer_3491 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Dfer_1298 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Dfer_4521 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Dfer_5759 magnesium transporter K06213 mgtE; magnesium transporter
D Dfer_2377 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Dfer_4055 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Dfer_3385 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Dfer_3384 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Dfer_0263 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Dfer_3288 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Dfer_4989 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Dfer_3981 CrcB protein K06199 crcB; fluoride exporter
D Dfer_1155 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D Dfer_0039 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D Dfer_0277 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D Dfer_5442 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D Dfer_0893 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D Dfer_1275 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D Dfer_3112 Heavy metal transport/detoxification protein K08364 merP; periplasmic mercuric ion binding protein
D Dfer_0238 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_4440 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_4622 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_2686 transporter-associated region K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_3360 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Dfer_0605 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Dfer_4115 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Dfer_2583 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Dfer_1794 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Dfer_5304 TonB-dependent receptor K19611 fepA; ferric enterobactin receptor
D Dfer_5196 TonB-dependent receptor K19611 fepA; ferric enterobactin receptor
D Dfer_3037 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D Dfer_5364 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter
D Dfer_4100 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Dfer_3315 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter
D Dfer_0714 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_0560 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_0640 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4708 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4717 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_5330 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4946 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4267 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4269 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2116 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1744 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1573 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1791 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2602 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1438 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1460 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_0793 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1778 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2267 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2523 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2207 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2533 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1766 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_2227 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1640 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1657 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1380 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1390 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1042 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_0811 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_1012 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4223 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Dfer_4648 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Dfer_3052 TonB-dependent receptor plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Dfer_3109 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Dfer_1282 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Dfer_0102 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_5341 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_5774 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_1761 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_3424 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_2239 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_4298 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_4568 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_4805 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_0346 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_1518 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_0558 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_4175 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_3233 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_1729 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_0975 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dfer_0578 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Dfer_2745 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Dfer_1811 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4640 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_5535 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_1912 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_2175 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0808 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0980 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0066 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Dfer_4388 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Dfer_5214 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Dfer_0537 conserved hypothetical protein K21449 ata; trimeric autotransporter adhesin
D Dfer_0502 lipoprotein K21449 ata; trimeric autotransporter adhesin
D Dfer_5262 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D Dfer_3346 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D Dfer_2337 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D Dfer_1341 conserved repeat domain protein K21449 ata; trimeric autotransporter adhesin
D Dfer_4821 ethanolamine transproter K16238 eat; ethanolamine permease
D Dfer_2747 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Dfer_1588 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Dfer_0580 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Dfer_0995 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Dfer_1813 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Dfer_3207 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Dfer_3431 acriflavin resistance protein K18989 vexF; multidrug efflux pump
D Dfer_5569 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Dfer_4532 RhaT l-rhamnose-proton symport 2 K02856 rhaT; L-rhamnose-H+ transport protein
D Dfer_2851 protein of unknown function DUF6 transmembrane K05786 rarD; chloramphenicol-sensitive protein RarD
D Dfer_4040 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Dfer_1028 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D Dfer_1410 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D Dfer_2739 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D Dfer_1835 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein
D Dfer_1646 sodium/calcium exchanger membrane region K07300 chaA; Ca2+:H+ antiporter
D Dfer_3533 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Dfer_3089 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Dfer_2874 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Dfer_0325 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Dfer_5097 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter
D Dfer_3407 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D Dfer_3408 NAD(P)H dehydrogenase (quinone) K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D Dfer_2576 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Dfer_2201 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Dfer_1107 sodium/hydrogen exchanger K26731 CHX; K+:H+ antiporter
D Dfer_5288 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Dfer_1130 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Dfer_5286 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Dfer_2707 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Dfer_0842 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Dfer_1650 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Dfer_4677 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Dfer_1273 manganese transporter NRAMP K03322 mntH; manganese transport protein
D Dfer_0846 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Dfer_0911 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Dfer_0177 polysaccharide biosynthesis protein K16695 wzxC; lipopolysaccharide exporter
D Dfer_2628 hypothetical protein K24180 mleP; malate permease and related proteins
D Dfer_5541 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Dfer_4676 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Dfer_3443 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Dfer_2724 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D Dfer_5115 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Dfer_3489 cell cycle protein K03588 ftsW; cell division protein FtsW
D Dfer_5365 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D Dfer_1592 MtN3 and saliva related transmembrane protein K15383 K15383; MtN3 and saliva related transmembrane protein
D Dfer_4058 TonB family protein K03832 tonB; periplasmic protein TonB
D Dfer_5150 TonB family protein K03832 tonB; periplasmic protein TonB
D Dfer_4338 OmpA/MotB domain protein K03640 pal; peptidoglycan-associated lipoprotein
D Dfer_1983 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Dfer_2020 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Dfer_0579 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Dfer_1812 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Dfer_2746 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Dfer_1589 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Dfer_0996 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Dfer_0982 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_2173 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5537 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_4642 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3208 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5137 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1161 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1001 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3430 efflux transporter, RND family, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D Dfer_4909 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Dfer_0165 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Dfer_3362 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dfer_0065 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dfer_4222 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1619 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_5600 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1013 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0810 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2232 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2301 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4718 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_3024 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1583 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4947 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1774 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1498 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0680 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_3283 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1041 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1904 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2152 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1684 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_5331 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2226 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1420 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4286 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4268 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4782 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1779 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1035 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4696 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1343 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1487 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2136 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2268 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0301 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4737 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1439 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_5704 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2218 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2261 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0773 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4497 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1857 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4455 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4709 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2522 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1622 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2244 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1849 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2208 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1639 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4183 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1803 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2603 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0713 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1724 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1379 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1389 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1844 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2115 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4950 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0322 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1459 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1564 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1765 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1790 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2293 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_3703 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_5259 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0639 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1602 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_4266 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1656 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2532 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0794 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_5675 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1572 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_0561 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1743 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2272 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_5673 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_2403 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1556 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_1701 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Dfer_3696 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D Dfer_5085 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Dfer_5086 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Dfer_5080 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D Dfer_2880 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Dfer_0168 conserved hypothetical protein K18814 ictB; putative inorganic carbon (hco3(-)) transporter
C 02044 Secretion system [BR:dfe02044]
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1068 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Dfer_1070 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Dfer_3589 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Dfer_3555 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dfer_3596 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dfer_3455 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Dfer_2731 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dfer_4363 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Dfer_3390 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dfer_3607 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dfer_4927 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Dfer_1150 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dfer_4461 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Dfer_2323 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Dfer_3888 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dfe02042]
D Dfer_0238 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_4440 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_4622 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_2686 transporter-associated region K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dfer_5383 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Dfer_1225 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:dfe02022]
D Dfer_3401 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_4094 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_5351 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_3565 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_5580 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dfer_4011 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Dfer_0381 osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dfer_4502 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dfer_1698 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dfer_0897 two component transcriptional regulator, LuxR family K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D Dfer_0608 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_5301 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_4796 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_2335 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_2192 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1276 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1284 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1285 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_1286 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dfer_2191 transcriptional regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D Dfer_4503 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Dfer_1697 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Dfer_2748 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Dfer_5299 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Dfer_1005 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Dfer_0734 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0598 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0601 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0602 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0757 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_1315 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_4385 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_5361 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_5404 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_3279 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_1474 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0799 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_2254 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_2255 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0857 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dfer_0582 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_1279 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_5142 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_1004 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_4386 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_5645 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_0148 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_0800 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_0804 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_0858 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_1475 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_2256 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_3280 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_5300 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_5312 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_0758 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_0764 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_4524 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_4770 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_5358 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_5303 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_1301 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_1502 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Dfer_3238 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Dfer_5458 putative two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Dfer_2749 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Dfer_0382 PAS/PAC sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D Dfer_1112 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Dfer_0373 two component, sigma54 specific, transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator
D Dfer_5177 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5570 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_0390 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_1133 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5176 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_5571 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_3185 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Dfer_0392 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Dfer_1662 two component transcriptional regulator, LuxR family K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D Dfer_5459 signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D Dfer_1630 two component transcriptional regulator, LytTR family K22010 pdtaR; two-component system, response regulator PdtaR
D Dfer_5597 Diverse 7TM receptor transmembrane region K20971 ladS; two-component system, sensor histidine kinase LadS
D Dfer_2391 Diverse 7TM receptor transmembrane region K20971 ladS; two-component system, sensor histidine kinase LadS
D Dfer_0345 histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:dfe02035]
D Dfer_0391 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dfer_1134 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dfer_5177 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5570 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_0390 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_1133 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dfer_5176 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_5571 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Dfer_2377 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:dfe04812]
D Dfer_3832 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Dfer_3484 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Dfer_3485 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Dfer_0206 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Dfer_1176 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Dfer_0207 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dfe04147]
D Dfer_5199 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D Dfer_4373 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dfer_1046 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dfer_2700 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dfer_3378 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dfer_0651 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_1888 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_1025 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_2734 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dfer_1226 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dfer_1231 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dfer_3655 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Dfer_2426 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4750 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4886 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Dfer_4441 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Dfer_3456 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dfer_4584 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Dfer_4668 Na+-dependent transporter-like protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D Dfer_3249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dfer_2430 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dfer_4522 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Dfer_4092 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dfer_4178 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dfer_4424 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dfer_2109 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Dfer_4096 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dfer_2595 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Dfer_2596 coagulation factor 5/8 type domain protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Dfer_0130 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Dfer_2819 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dfer_0465 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dfer_0151 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dfer_0213 glycoside hydrolase family 13 domain protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dfer_1955 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dfer_3902 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dfer_2143 carbohydrate kinase FGGY K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dfer_0446 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_0448 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_4670 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dfer_3652 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Dfer_2107 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Dfer_5000 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Dfer_1383 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dfer_0419 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_3130 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_4690 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dfer_3074 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dfer_3995 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dfer_1241 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Dfer_3400 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dfer_5182 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dfer_3869 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:dfe02048]
D Dfer_5242 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Dfer_5244 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Dfer_5496 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Dfer_1174 N-6 DNA methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Dfer_5226 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Dfer_5227 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Dfer_1361 Domain of unknown function DUF1813 HSP20-like protein K19048 symE; toxic protein SymE
D Dfer_1185 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Dfer_1718 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Dfer_1186 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D Dfer_3992 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D Dfer_5649 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D Dfer_2859 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Dfer_2599 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Dfer_2860 hypothetical protein K19159 yefM; antitoxin YefM
D Dfer_2600 hypothetical protein K19159 yefM; antitoxin YefM
D Dfer_1719 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Dfer_2824 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Dfer_3554 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Dfer_3885 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4
D Dfer_1359 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D Dfer_4296 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Dfer_4426 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Dfer_4145 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Dfer_3977 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Dfer_5529 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Dfer_2131 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Dfer_4917 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Dfer_2504 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Dfer_0091 putative plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_3978 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_4146 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_4425 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_5282 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_5530 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_2132 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Dfer_2505 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Dfer_4918 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Dfer_4500 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Dfer_1123 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Dfer_2468 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Dfer_3484 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Dfer_3832 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Dfer_2645 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Dfer_2768 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Dfer_4262 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dfer_5192 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_2049 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dfer_4416 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:dfe04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:dfe04090]
D Dfer_3655 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:dfe01504]
D Dfer_0918 GCN5-related N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D Dfer_0786 GCN5-related N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D Dfer_2258 adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D Dfer_1259 major facilitator superfamily MFS_1 K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein
D Dfer_1781 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D Dfer_3722 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3381 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Dfer_0288 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_1288 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3382 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Dfer_4940 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Dfer_3721 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_1287 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_3380 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_0287 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Dfer_2827 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Dfer_0982 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_2173 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5537 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_4642 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3208 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_5137 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1161 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_1001 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Dfer_3207 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Dfer_4640 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_5535 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_1912 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_2175 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0808 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_0980 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Dfer_2866 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_0042 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_5135 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4897 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_2021 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_1000 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3159 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_3429 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dfer_4162 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dfe00537]
D Dfer_1383 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dfer_2671 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Dfer_0651 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_1888 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dfer_1025 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dfe03100]
D Dfer_R0045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dfer_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dfer_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dfer_R0014 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dfer_R0043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dfer_R0044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dfer_R0020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Dfer_R0031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dfer_R0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dfer_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dfer_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dfer_R0037 tRNA-His K14226 tRNA-His; tRNA His
D Dfer_R0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dfer_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dfer_R0003 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dfer_R0005 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dfer_R0006 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dfer_R0030 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dfer_R0009 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dfer_R0032 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dfer_R0049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dfer_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dfer_R0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dfer_R0047 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dfer_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dfer_R0017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dfer_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dfer_R0016 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Dfer_R0019 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dfer_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dfer_R0001 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dfer_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dfer_R0028 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dfer_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0029 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dfer_R0042 ffs; SRP_RNA K01983 ffs; SRP RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Dfer_5724 glucose-methanol-choline oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D Dfer_2494 glucose-methanol-choline oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D Dfer_4807 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D Dfer_5578 putative dehydrogenase protein K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D Dfer_1598 oxidoreductase domain protein K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28]
D Dfer_5680 conserved hypothetical protein K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D Dfer_0018 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Dfer_0731 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Dfer_3446 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Dfer_0019 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Dfer_3445 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Dfer_0732 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Dfer_2888 Saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D Dfer_3409 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Dfer_3317 NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Dfer_1470 NAD(P)H dehydrogenase (quinone) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D Dfer_1854 (acyl-carrier protein) phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Dfer_3374 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D Dfer_3755 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Dfer_0925 Methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Dfer_4765 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Dfer_0083 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Dfer_0564 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_0098 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_5340 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_0386 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_3388 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_1545 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_0101 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Dfer_1680 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D Dfer_0517 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D Dfer_0256 alpha/beta hydrolase fold protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Dfer_2937 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Dfer_5194 Peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Dfer_5772 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Dfer_4528 alkylhydroperoxidase like protein, AhpD family K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D Dfer_4529 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D Dfer_3768 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Dfer_0356 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Dfer_5419 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Dfer_2185 globin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D Dfer_2546 fatty acid hydroxylase K19703 FA2H; 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase [EC:1.14.18.6]
D Dfer_2507 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D Dfer_1929 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dfer_0848 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dfer_0909 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dfer_2855 short-chain dehydrogenase/reductase SDR K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D Dfer_1351 Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D Dfer_4418 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D Dfer_5591 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Dfer_2812 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Dfer_0475 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D Dfer_0703 Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D Dfer_2287 GCN5-related N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D Dfer_1874 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D Dfer_2457 GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D Dfer_4428 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Dfer_2479 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Dfer_4316 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Dfer_2606 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dfer_1391 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dfer_1664 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dfer_2563 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dfer_2139 type III effector Hrp-dependent outers K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231]
D Dfer_0224 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Dfer_0644 pyruvate phosphate dikinase PEP/pyruvate-binding K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D Dfer_3874 Non-specific serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D Dfer_3021 protein of unknown function DUF303 acetylesterase putative K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Dfer_0312 protein of unknown function DUF303 acetylesterase putative K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Dfer_5714 putative acetyl xylan esterase K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Dfer_1521 glycoside hydrolase family 2 sugar binding K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Dfer_2290 glycoside hydrolase family 2 sugar binding K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Dfer_2269 glycoside hydrolase family 2 sugar binding K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Dfer_3033 putative acetyl xylan esterase K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Dfer_3126 putative acetyl xylan esterase K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Dfer_1405 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Dfer_3010 thioesterase-like protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dfer_5014 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dfer_1993 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dfer_0646 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Dfer_0067 PHP domain protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Dfer_2799 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Dfer_5476 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Dfer_3244 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Dfer_5071 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D Dfer_0796 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Dfer_4284 Arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Dfer_4703 glycoside hydrolase family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Dfer_0797 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D Dfer_2841 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Dfer_1569 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Dfer_4761 glycosy hydrolase family protein K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D Dfer_3176 glycosidase PH1107-related K21065 E3.2.1.197; beta-1,2-mannosidase [EC:3.2.1.197]
D Dfer_4052 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Dfer_4687 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dfer_3505 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dfer_5477 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dfer_1987 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dfer_0084 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Dfer_0749 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dfer_2445 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dfer_1772 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dfer_1892 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dfer_4261 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dfer_2815 Glucosamine-6-phosphate deaminase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-]
D Dfer_2094 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Dfer_4318 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Dfer_2500 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Dfer_2138 Ribulose-bisphosphate carboxylase K01559 oiaT; 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:3.7.1.28]
D Dfer_3178 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Dfer_0501 conserved hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Dfer_5089 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Dfer_4073 acetyltransferase/carbonic anhydrase K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-]
D Dfer_3092 aminotransferase class-III K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D Dfer_1975 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D Dfer_4299 Xylose isomerase domain protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D Dfer_4701 Xylose isomerase domain protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D Dfer_4538 Xylose isomerase domain protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D Dfer_3174 Xylose isomerase domain protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D Dfer_3700 protein of unknown function DUF718 K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D Dfer_5741 protein of unknown function DUF718 K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D Dfer_5652 N-acylglucosamine 2-epimerase K24671 mne; mannose 2-epimerase [EC:5.1.3.44]
D Dfer_0515 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D Dfer_4117 Mur ligase middle domain protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Dfer_3106 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Dfer_1187 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Dfer_5743 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Dfer_5745 protein of unknown function DUF162 K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Dfer_5746 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Dfer_3548 conserved hypothetical protein K22136 bshC; bacillithiol synthase
D Dfer_3547 hypothetical protein K22136 bshC; bacillithiol synthase
D Dfer_5725 twin-arginine translocation pathway signal K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
D Dfer_2493 twin-arginine translocation pathway signal K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D Dfer_3686 Alcohol dehydrogenase zinc-binding domain protein K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D Dfer_2665 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Dfer_0408 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Dfer_1240 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Dfer_2496 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Dfer_1789 alanine racemase domain protein K06997 yggS; PLP dependent protein
D Dfer_2011 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Dfer_4554 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D Dfer_5398 conserved hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase
D Dfer_3483 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D Dfer_0385 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Dfer_3216 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Dfer_2066 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Dfer_2404 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Dfer_1398 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Dfer_1319 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Dfer_0354 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
D Dfer_3051 DoxX family protein K15977 K15977; putative oxidoreductase
D Dfer_3989 DoxX family protein K15977 K15977; putative oxidoreductase
D Dfer_5453 DoxX family protein K15977 K15977; putative oxidoreductase
D Dfer_0355 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Dfer_5785 protein of unknown function DUF1094 K26958 brxA_B; bacilliredoxin
D Dfer_0349 conserved hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Dfer_5157 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Dfer_0895 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Dfer_3018 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Dfer_4008 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Dfer_4688 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Dfer_1085 RNA binding S1 domain protein K06959 tex; protein Tex
C 99974 Translation
D Dfer_3744 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
D Dfer_5620 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
D Dfer_3335 exonuclease of the beta-lactamase fold involved in RNA processing K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D Dfer_2904 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Dfer_4576 trigger factor K03545 tig; trigger factor
D Dfer_3480 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Dfer_3646 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Dfer_0411 proteasome-type protease K07395 K07395; putative proteasome-type protease
D Dfer_5001 OsmC family protein K07397 yhfA; putative redox protein
D Dfer_2959 conserved hypothetical protein K07401 K07401; selenoprotein W-related protein
D Dfer_5191 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Dfer_2900 Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Dfer_5144 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Dfer_3709 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Dfer_0214 DNA protecting protein DprA K04096 smf; DNA processing protein
D Dfer_5733 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Dfer_3714 conserved hypothetical protein K07501 K07501; 3'-5' exonuclease
D Dfer_4442 transposase K07483 K07483; transposase
D Dfer_1880 transposase K07483 K07483; transposase
D Dfer_1883 transposase IS3/IS911 family protein K07483 K07483; transposase
D Dfer_0866 transposase IS3/IS911 family protein K07483 K07483; transposase
D Dfer_0872 transposase IS3/IS911 family protein K07483 K07483; transposase
D Dfer_4026 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Dfer_2919 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Dfer_5410 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Dfer_3328 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Dfer_3050 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Dfer_3147 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Dfer_1178 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Dfer_4813 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Dfer_0526 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_0527 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Dfer_3123 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_2314 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_1935 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_0882 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_3122 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Dfer_2313 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Dfer_0881 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Dfer_4443 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_1879 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_1881 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_0867 Integrase catalytic region K07497 K07497; putative transposase
D Dfer_0871 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Dfer_3124 protein of unknown function DUF450 K07504 K07504; predicted type IV restriction endonuclease
D Dfer_4005 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D Dfer_4337 Deoxyribodipyrimidine photo-lyase K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Dfer_3597 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Dfer_4275 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Dfer_3770 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Dfer_4823 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Dfer_2174 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_5536 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_4164 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_0981 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_5136 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_2558 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_4641 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dfer_4332 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D Dfer_4732 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Dfer_5697 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_3985 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_1859 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_3072 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_5253 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_3406 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_3022 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_2608 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dfer_2456 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D Dfer_2140 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D Dfer_2802 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D Dfer_0698 Hemerythrin HHE cation binding domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D Dfer_3774 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Dfer_3399 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Dfer_2508 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D Dfer_1072 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Dfer_3973 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Dfer_4389 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Dfer_4390 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Dfer_2632 glycoside hydrolase family 25 K07273 acm; lysozyme
D Dfer_2865 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Dfer_5609 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Dfer_4837 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Dfer_0136 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D Dfer_4581 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D Dfer_3976 CutC family protein K06201 cutC; copper homeostasis protein
D Dfer_0197 ApaG domain protein K06195 apaG; ApaG protein
D Dfer_0695 periplasmic copper-binding K07218 nosD; nitrous oxidase accessory protein
D Dfer_3538 Hemin-degrading family protein K07225 hmuS; putative hemin transport protein
D Dfer_0694 hypothetical protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Dfer_4730 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Dfer_2652 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein
D Dfer_2419 globin K06886 glbN; hemoglobin
D Dfer_4740 Patatin K07001 K07001; NTE family protein
D Dfer_5074 Patatin K07001 K07001; NTE family protein
D Dfer_1958 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D Dfer_3624 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D Dfer_2575 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Dfer_5779 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Dfer_5616 aryldialkylphosphatase K07048 PTER; phosphotriesterase-related protein
D Dfer_1591 ribonuclease BN K07058 K07058; membrane protein
D Dfer_2801 ribonuclease BN K07058 K07058; membrane protein
D Dfer_5015 ribonuclease BN K07058 K07058; membrane protein
D Dfer_5577 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Dfer_5783 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Dfer_0476 Rhodanese domain protein K07146 K07146; UPF0176 protein
D Dfer_5411 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Dfer_4651 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Dfer_5402 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Dfer_1328 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein
D Dfer_0922 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Dfer_4336 LemA family protein K03744 lemA; LemA protein
D Dfer_2646 protein of unknown function DUF218 K03748 sanA; SanA protein
D Dfer_4069 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Dfer_4444 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Dfer_4241 membrane protein of unknown function K08972 K08972; putative membrane protein
D Dfer_3463 protein of unknown function DUF420 K08976 K08976; putative membrane protein
D Dfer_1370 protein of unknown function DUF1304 K08987 K08987; putative membrane protein
D Dfer_5576 outer membrane protein-like protein K08995 K08995; putative membrane protein
D Dfer_0511 outer membrane protein-like protein K08995 K08995; putative membrane protein
D Dfer_3182 outer membrane protein-like protein K08995 K08995; putative membrane protein
D Dfer_5178 putative outer membrane protein K08995 K08995; putative membrane protein
D Dfer_5552 outer membrane protein-like protein K08995 K08995; putative membrane protein
D Dfer_2536 outer membrane protein K08995 K08995; putative membrane protein
D Dfer_1749 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
D Dfer_2211 protein of unknown function DUF417 K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D Dfer_5572 Ankyrin K06867 K06867; uncharacterized protein
D Dfer_4030 Ankyrin K06867 K06867; uncharacterized protein
D Dfer_1807 Ankyrin K06867 K06867; uncharacterized protein
D Dfer_4334 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Dfer_3017 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Dfer_0027 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Dfer_0963 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D Dfer_0668 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D Dfer_0674 putative phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D Dfer_1109 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Dfer_3331 metallophosphoesterase K06953 K06953; uncharacterized protein
D Dfer_4552 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D Dfer_0293 acetyltransferase-like protein K06975 K06975; uncharacterized protein
D Dfer_2792 peptidase S15 K06978 K06978; uncharacterized protein
D Dfer_2454 X-Pro dipeptidyl-peptidase domain protein K06978 K06978; uncharacterized protein
D Dfer_0413 conserved hypothetical protein, membrane K07003 K07003; uncharacterized protein
D Dfer_2001 MCP methyltransferase, CheR-type K07003 K07003; uncharacterized protein
D Dfer_1192 conserved hypothetical protein K07005 K07005; uncharacterized protein
D Dfer_4751 hypothetical protein K07005 K07005; uncharacterized protein
D Dfer_1914 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein
D Dfer_4689 alpha/beta hydrolase fold protein K07019 K07019; uncharacterized protein
D Dfer_1750 conserved hypothetical protein K07032 K07032; uncharacterized protein
D Dfer_2949 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Dfer_2882 TatD-related deoxyribonuclease K07051 K07051; uncharacterized protein
D Dfer_0335 protein of unknown function zinc metallopeptidase putative K07054 K07054; uncharacterized protein
D Dfer_3205 putative nucleic acid-binding protein K07063 K07063; uncharacterized protein
D Dfer_3766 conserved hypothetical protein K07063 K07063; uncharacterized protein
D Dfer_4158 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D Dfer_0124 conserved hypothetical protein K07074 K07074; uncharacterized protein
D Dfer_3213 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Dfer_3676 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Dfer_5246 DNA polymerase beta domain protein region K07076 K07076; uncharacterized protein
D Dfer_0837 DNA polymerase beta domain protein region K07076 K07076; uncharacterized protein
D Dfer_1720 HEPN domain protein K07076 K07076; uncharacterized protein
D Dfer_2466 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Dfer_2611 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Dfer_2380 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Dfer_4076 metallophosphoesterase K07098 K07098; uncharacterized protein
D Dfer_3115 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Dfer_3116 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Dfer_1080 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein
D Dfer_5585 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Dfer_3078 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Dfer_1352 AAA ATPase K07133 K07133; uncharacterized protein
D Dfer_5654 ATPase K07133 K07133; uncharacterized protein
D Dfer_4042 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Dfer_2465 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Dfer_3330 AAA+ superfamily protein K07133 K07133; uncharacterized protein
D Dfer_4210 AAA ATPase K07133 K07133; uncharacterized protein
D Dfer_3737 AAA ATPase K07133 K07133; uncharacterized protein
D Dfer_2641 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D Dfer_3013 MOSC domain containing protein K07140 K07140; MOSC domain-containing protein
D Dfer_1825 MOSC domain containing protein K07140 K07140; MOSC domain-containing protein
D Dfer_5146 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Dfer_4317 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Dfer_1242 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Dfer_3905 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Dfer_4729 conserved hypothetical protein K09117 K09117; uncharacterized protein
D Dfer_5731 hypothetical protein K09161 K09161; uncharacterized protein
D Dfer_5770 protein of unknown function DUF1684 K09164 K09164; uncharacterized protein
D Dfer_0011 protein of unknown function DUF1684 K09164 K09164; uncharacterized protein
D Dfer_2196 protein of unknown function DUF1684 K09164 K09164; uncharacterized protein
D Dfer_4291 conserved hypothetical protein K09704 K09704; uncharacterized protein
D Dfer_3937 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D Dfer_2968 YCII-related protein K09780 K09780; uncharacterized protein
D Dfer_1755 protein of unknown function DUF808 K09781 K09781; uncharacterized protein
D Dfer_5319 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Dfer_3934 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Dfer_5129 RNA binding S1 domain protein K00243 K00243; uncharacterized protein
D Dfer_2981 protein of unknown function DUF486 K09922 K09922; uncharacterized protein
D Dfer_4195 conserved hypothetical protein K09932 K09932; uncharacterized protein
D Dfer_4912 conserved hypothetical protein K09954 K09954; uncharacterized protein
D Dfer_0635 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Dfer_2133 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Dfer_4835 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Dfer_0802 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Dfer_0073 protein of unknown function DUF779 K09959 K09959; uncharacterized protein
D Dfer_3396 GumN family protein K09973 K09973; uncharacterized protein
D Dfer_1062 conserved hypothetical protein K09990 K09990; uncharacterized protein
D Dfer_1372 sigma-70 factor K09992 K09992; uncharacterized protein
D Dfer_4699 conserved hypothetical protein K09992 K09992; uncharacterized protein
D Dfer_4288 membrane-bound dehydrogenase domain protein K09992 K09992; uncharacterized protein
D Dfer_4304 protein of unknown function DUF1037 K09992 K09992; uncharacterized protein
D Dfer_1086 conserved hypothetical protein K09992 K09992; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 28, 2024