+D GENES KO
#
KEGG Orthology (KO) - Desulfovibrio ferrophilus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dfl00010]
D DFE_0284 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DFE_3323 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DFE_1073 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DFE_1150 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DFE_2734 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DFE_2194 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DFE_3005 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1897 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_0924 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DFE_1043 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DFE_2193 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DFE_0923 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DFE_0364 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DFE_1127 2,3-bisphosphoglycerate-independentphosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DFE_0104 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DFE_2145 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DFE_3329 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DFE_1094 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_1430 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_3103 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_2349 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_3289 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DFE_1153 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_0177 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1783 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_2666 3-methyl-2-oxobutanoate dehydrogenase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1152 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_0176 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_1782 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_2667 2-oxoglutarate synthase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_2450 acsA2; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2628 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2279 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2169 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_1779 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:dfl00020]
D DFE_2759 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D DFE_2051 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DFE_1385 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1153 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_0177 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1783 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_2666 3-methyl-2-oxobutanoate dehydrogenase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1152 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_0176 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_1782 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_2667 2-oxoglutarate synthase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_0175 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DFE_1781 pyruvate/ketoisovalerate oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DFE_2668 pyruvate/ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DFE_0178 4Fe-4S ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DFE_1780 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DFE_2665 vorC; ketoisovalerate oxidoreductase subunit VorC K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DFE_0173 succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DFE_0590 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0591 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0589 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C
D DFE_0592 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D DFE_0593 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DFE_0313 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DFE_1095 carbamoyl-phosphate synthase L chain ATP-binding K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DFE_3289 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:dfl00030]
D DFE_3323 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DFE_2915 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DFE_1130 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D DFE_2916 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DFE_1926 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DFE_1149 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DFE_0963 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DFE_1148 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_0723 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DFE_0042 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D DFE_2161 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D DFE_2741 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D DFE_2734 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DFE_2194 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DFE_3005 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1897 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1073 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DFE_1150 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:dfl00040]
D DFE_0887 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DFE_0277 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DFE_1926 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DFE_3215 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:dfl00051]
D DFE_2001 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_2582 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DFE_2298 GDP-L-fucose synthetase-related K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DFE_3215 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DFE_1073 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DFE_1150 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DFE_2734 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DFE_2194 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DFE_3005 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1897 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_0924 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DFE_1148 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DFE_0851 phosphotransferase system enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DFE_0853 uncharacterized protein K02795 manY; mannose PTS system EIIC component
D DFE_2132 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:dfl00052]
D DFE_1624 uncharacterized protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2843 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2574 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2303 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_0277 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_0284 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DFE_2561 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:dfl00053]
D DFE_0887 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DFE_2658 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:dfl00500]
D DFE_0277 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DFE_1279 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DFE_3220 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DFE_1305 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D DFE_2789 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D DFE_3221 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DFE_2788 malQ; putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DFE_1562 group 1 glycosyl transferase K13057 treT; trehalose synthase [EC:2.4.1.245]
D DFE_1065 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_0284 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DFE_3323 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dfl00520]
D DFE_0506 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DFE_3191 glucosamine/fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DFE_0276 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DFE_2930 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DFE_1684 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DFE_1816 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DFE_1272 N-acylneuraminate-9-phosphate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D DFE_2602 neuC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DFE_2301 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DFE_2302 WblC protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D DFE_2960 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DFE_2839 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D DFE_2603 N-acylneuraminate-9-phosphate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D DFE_2596 acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D DFE_2600 N-acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D DFE_2854 cytidylyltransferase domain protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D DFE_3328 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D DFE_1276 galE; UDP-glucose 4-epimerase K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]
D DFE_0284 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_0277 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DFE_0887 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DFE_2841 NAD-dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D DFE_1624 uncharacterized protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2843 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2574 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2303 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2561 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DFE_2658 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D DFE_0851 phosphotransferase system enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DFE_0853 uncharacterized protein K02795 manY; mannose PTS system EIIC component
D DFE_2132 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D DFE_3323 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DFE_2001 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DFE_2582 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DFE_2605 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D DFE_2298 GDP-L-fucose synthetase-related K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:dfl00620]
D DFE_2450 acsA2; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2628 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2279 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_3289 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DFE_1153 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_0177 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1783 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_2666 3-methyl-2-oxobutanoate dehydrogenase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1152 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_0176 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_1782 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_2667 2-oxoglutarate synthase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_3294 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DFE_3293 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DFE_3329 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DFE_1374 accD; acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DFE_2233 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DFE_2169 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_1779 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_3147 oxidoreductase, FAD/iron-sulfur cluster-binding domain protein K18930 dld; D-lactate dehydrogenase
D DFE_3235 beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DFE_0599 malate dehydrogenase(Oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DFE_1095 carbamoyl-phosphate synthase L chain ATP-binding K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DFE_0592 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D DFE_0593 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DFE_0313 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DFE_0590 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0591 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0589 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C
D DFE_1094 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_1430 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_3103 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_2349 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_1550 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DFE_0880 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DFE_1493 pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dfl00630]
D DFE_2450 acsA2; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2628 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2279 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2051 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DFE_2871 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D DFE_2128 D-lactate dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D DFE_3291 glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D DFE_2121 Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D DFE_3292 iron-sulfur cluster-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D DFE_0469 catalase K03781 katE; catalase [EC:1.11.1.6]
D DFE_2332 glyoxylate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DFE_2287 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DFE_1010 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2790 glnA_1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2221 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DFE_1600 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D DFE_1601 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D DFE_0916 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1599 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DFE_0627 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_0628 formate dehydrogenase, subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_1351 fdnG; putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_1352 fdhA; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_0626 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_1353 fdhB; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_0125 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_3364 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_1890 Deca-heme C-type cytochrome K00127 fdoI; formate dehydrogenase subunit gamma
D DFE_3054 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:dfl00640]
D DFE_2450 acsA2; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2628 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2279 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2169 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_1779 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_3294 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DFE_3293 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1374 accD; acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DFE_0173 succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:dfl00650]
D DFE_2476 buk; probable butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D DFE_0590 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0591 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0589 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C
D DFE_3289 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DFE_1153 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_0177 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1783 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_2666 3-methyl-2-oxobutanoate dehydrogenase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DFE_1152 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_0176 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_1782 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_2667 2-oxoglutarate synthase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DFE_0749 acetolactate synthase large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0524 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0750 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_0523 amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_2474 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_3307 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:dfl00660]
D DFE_0749 acetolactate synthase large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0524 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0750 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_0523 amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_2474 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_3307 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D DFE_0173 succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DFE_1549 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DFE_1548 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DFE_1547 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:dfl00562]
D DFE_0920 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DFE_0924 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dfl00190]
D DFE_0137 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DFE_0138 NAD(P)H-quinone oxidoreductase subunit K K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DFE_0139 NADH dehydrogenase (Ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D DFE_0140 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D DFE_0141 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DFE_0142 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DFE_0143 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DFE_0144 NAD(P)H-quinone oxidoreductase subunit 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DFE_0148 proton-translocating NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DFE_0149 nuoN; NADH-quinone oxidoreductase subunit N 2 K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DFE_0590 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0591 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D DFE_0589 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C
D DFE_1759 cytochrome b/b6 family protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DFE_0070 putative Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DFE_0068 coxD; cytochrome c oxidase subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D DFE_0067 coxC; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D DFE_0066 coxA; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DFE_0069 cytochrome aa3-type quinol oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DFE_2918 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DFE_2917 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DFE_0064 cytochrome c class I K08738 CYC; cytochrome c
D DFE_2934 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DFE_2932 atpD-3; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DFE_2933 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DFE_2935 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DFE_2931 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DFE_2907 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DFE_2936 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DFE_2937 H+ transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DFE_2906 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DFE_0854 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:dfl00680]
D DFE_0627 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_0628 formate dehydrogenase, subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_1351 fdnG; putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_1352 fdhA; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DFE_0626 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_1353 fdhB; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_0125 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_3364 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DFE_1890 Deca-heme C-type cytochrome K00127 fdoI; formate dehydrogenase subunit gamma
D DFE_2489 formate dehydrogenase K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D DFE_0758 4Fe-4S ferredoxin iron-sulfur binding domain protein K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D DFE_2686 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D DFE_2221 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DFE_2332 glyoxylate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DFE_2145 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DFE_2734 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DFE_2194 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DFE_3005 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1897 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1073 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DFE_1150 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DFE_0264 formylmethanofuran dehydrogenase subunit E domain-containing protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D DFE_0075 formylmethanofuran dehydrogenase subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D DFE_1350 formylmethanofuran dehydrogenase subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D DFE_1763 coenzyme F420-reducing hydrogenase, beta subunit homolog K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D DFE_0756 4Fe-4S ferredoxin K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_2487 heterodisulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_2490 response regulator receiver protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_0755 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_2492 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_0754 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_2491 putative heterodisulfide reductase, C subunit K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D DFE_2488 methyl-viologen-reducing hydrogenase subunit delta K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D DFE_0757 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D DFE_3294 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DFE_3293 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DFE_2450 acsA2; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2628 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2279 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_1094 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_1430 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_3103 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_2349 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DFE_0364 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DFE_1127 2,3-bisphosphoglycerate-independentphosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DFE_0104 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DFE_1118 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2862 pdxB_1; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2088 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DFE_0184 aspartate aminotransferase K19793 mfnC; (5-formylfuran-3-yl)methyl phosphate transaminase [EC:2.6.1.108]
C 00910 Nitrogen metabolism [PATH:dfl00910]
D DFE_1489 nitrogenase molybdenum-iron protein subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D DFE_1488 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DFE_1492 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D DFE_0001 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D DFE_0004 cytochrome c nitrite reductase, catalytic subunit 9 hemes K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6]
D DFE_1520 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DFE_0171 Glu/Leu/Phe/Val dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DFE_1010 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2790 glnA_1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_1040 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DFE_1046 glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DFE_0025 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DFE_0475 dihydropyrimidine dehydrogenase subunit A K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DFE_1339 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DFE_0674 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:dfl00920]
D DFE_2054 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_1762 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_2286 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DFE_1617 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DFE_1195 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D DFE_2056 adenylylsulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D DFE_2055 dissimilatory adenylylsulfate reductase beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D DFE_0543 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D DFE_1918 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C
D DFE_3070 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D DFE_3071 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D DFE_2310 nitrate reductase subunit gamma K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D DFE_2311 reductase, iron-sulfur binding subunit K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D DFE_2312 cytochrome c family protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D DFE_2313 4Fe-4S ferredoxin K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D DFE_2314 polysulfide reductase NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D DFE_0136 nitrate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DFE_0077 formate dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DFE_3231 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DFE_3230 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DFE_1424 uncharacterized protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dfl00061]
D DFE_1374 accD; acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DFE_2219 acyl carrier protein K02078 acpP; acyl carrier protein
D DFE_0574 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DFE_2217 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DFE_2220 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DFE_2188 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_2218 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_0332 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DFE_0559 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_0704 fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D DFE_0559 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_0704 fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dfl00561]
D DFE_2512 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DFE_2216 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DFE_2613 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DFE_0084 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DFE_1100 uncharacterized protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D DFE_2841 NAD-dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:dfl00564]
D DFE_2971 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DFE_2508 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DFE_1473 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DFE_2509 glpB; glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D DFE_1474 glycerol 3-phosphate dehydrogenase (Quinone) subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D DFE_2613 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DFE_0084 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DFE_1580 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DFE_0267 eutB; ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D DFE_0266 ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D DFE_1905 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DFE_1551 CDP-diacylglycerol/serineO-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DFE_1552 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DFE_1081 CDP-diacylglycerol/glycerol-3-phosphate3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DFE_1606 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D DFE_2797 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D DFE_0740 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D DFE_2013 putative G-D-S-L family lipolytic protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DFE_0765 SGNH-hydrolase lipoprotein, lysophospholipase L1-like subgroup K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dfl00230]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_0723 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DFE_0342 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DFE_3117 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DFE_3082 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DFE_0840 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DFE_2954 phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D DFE_1853 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DFE_3116 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DFE_1519 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DFE_2748 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DFE_2610 phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DFE_2460 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DFE_1571 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DFE_2195 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DFE_1379 purine nucleoside phosphorylase I K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DFE_0584 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DFE_1139 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DFE_1634 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DFE_1317 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DFE_3190 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DFE_0299 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D DFE_1633 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DFE_0427 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DFE_2835 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DFE_3257 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DFE_0010 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DFE_0781 metal-dependent phosphohydrolase HD sub domain-containing protein K01129 dgt; dGTPase [EC:3.1.5.1]
D DFE_1319 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DFE_0821 PAS domain S-box K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_0964 adenylate/guanylate cyclase with Chase sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_1957 GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_0669 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_1523 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_3263 adenylate/guanylate cyclase with integral membrane sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_0830 putative Histidine kinase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DFE_2265 putative adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D DFE_0363 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D DFE_0777 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D DFE_2494 putative Adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D DFE_2607 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DFE_1619 adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D DFE_0903 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DFE_2993 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DFE_1343 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D DFE_0955 histidine triad protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D DFE_2286 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DFE_1617 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DFE_2054 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_1762 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_1339 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:dfl00240]
D DFE_0341 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DFE_1269 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DFE_2774 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DFE_2775 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DFE_0358 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D DFE_0357 dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D DFE_2749 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DFE_0426 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DFE_1902 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DFE_1317 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DFE_2993 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DFE_1605 Maf-like protein DMR_31820 K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DFE_0841 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DFE_2995 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DFE_2460 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DFE_1571 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DFE_2195 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DFE_1622 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DFE_0713 pyrR; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DFE_1871 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D DFE_3257 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DFE_0010 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DFE_2835 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DFE_2222 zinc-binding CMP/dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DFE_2197 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DFE_1306 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DFE_0238 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dfl00250]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_1034 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DFE_2152 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D DFE_3200 asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DFE_2699 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DFE_1576 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D DFE_0260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DFE_0261 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DFE_2607 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DFE_2748 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DFE_2774 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DFE_1040 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DFE_1046 glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DFE_0025 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DFE_0475 dihydropyrimidine dehydrogenase subunit A K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DFE_0171 Glu/Leu/Phe/Val dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DFE_0053 aldehyde Dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DFE_1010 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2790 glnA_1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_0341 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DFE_1269 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DFE_0840 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DFE_3191 glucosamine/fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DFE_0342 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dfl00260]
D DFE_0881 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DFE_1542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DFE_0106 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DFE_1220 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DFE_3196 Aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DFE_2221 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DFE_2332 glyoxylate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DFE_0364 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DFE_1127 2,3-bisphosphoglycerate-independentphosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DFE_0104 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DFE_1118 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2862 pdxB_1; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2088 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DFE_0731 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DFE_0730 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D DFE_1600 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D DFE_1601 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D DFE_0916 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1599 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DFE_1551 CDP-diacylglycerol/serineO-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DFE_3319 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D DFE_3318 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D DFE_2419 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DFE_3017 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DFE_3016 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DFE_3035 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:dfl00270]
D DFE_3231 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DFE_3230 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DFE_1142 Homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DFE_1625 methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D DFE_2891 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DFE_0584 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DFE_0874 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D DFE_0875 guanine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D DFE_1171 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D DFE_2885 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DFE_0881 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DFE_1542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DFE_0106 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DFE_2712 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D DFE_1027 iron-sulfur binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D DFE_1169 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1541 class IV aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2419 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DFE_1118 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2862 pdxB_1; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:dfl00280]
D DFE_1169 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1541 class IV aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_0162 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dfl00290]
D DFE_1549 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DFE_1548 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DFE_1547 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DFE_0749 acetolactate synthase large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0524 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0750 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_0523 amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_2474 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_0751 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DFE_2642 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DFE_1169 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1541 class IV aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1550 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DFE_0880 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:dfl00300]
D DFE_0106 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DFE_0881 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DFE_1542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DFE_0857 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DFE_0791 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DFE_1307 acetylornithine/succinyldiaminopimelateaminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DFE_0872 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DFE_1873 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DFE_0858 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DFE_1527 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DFE_0960 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DFE_0950 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DFE_1876 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DFE_2360 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DFE_1839 lysN; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D DFE_1823 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DFE_1822 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:dfl00310]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1364 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D DFE_1412 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D DFE_1858 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D DFE_1833 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00220 Arginine biosynthesis [PATH:dfl00220]
D DFE_0259 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DFE_0260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DFE_0261 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DFE_0840 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DFE_1010 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2790 glnA_1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_0171 Glu/Leu/Phe/Val dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DFE_1339 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_1140 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D DFE_2117 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DFE_0714 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DFE_3025 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DFE_1307 acetylornithine/succinyldiaminopimelateaminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:dfl00330]
D DFE_1871 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D DFE_2477 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D DFE_2480 speB; SpeB protein K01480 speB; agmatinase [EC:3.5.3.11]
D DFE_2479 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D DFE_1318 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DFE_1773 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DFE_0053 aldehyde Dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DFE_3243 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DFE_0207 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_1833 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:dfl00340]
D DFE_2779 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DFE_2778 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D DFE_1628 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DFE_1234 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DFE_2589 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DFE_1235 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DFE_2588 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DFE_1630 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DFE_2996 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_2203 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_1518 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:dfl00350]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2996 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_2203 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_0354 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:dfl00360]
D DFE_3022 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DFE_1131 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DFE_3308 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2996 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_2203 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_0354 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00380 Tryptophan metabolism [PATH:dfl00380]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_0046 GCN5-related N-acetyltransferase K22450 SNAT; aralkylamine N-acetyltransferase [EC:2.3.1.87]
D DFE_0469 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dfl00400]
D DFE_3005 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_1897 phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D DFE_3006 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24]
D DFE_0976 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DFE_0185 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DFE_2361 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DFE_3009 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DFE_3088 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DFE_3011 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DFE_3012 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DFE_3013 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DFE_3015 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DFE_0114 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DFE_3014 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DFE_3017 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DFE_3016 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DFE_3035 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DFE_3010 prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D DFE_3007 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2996 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_2203 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D DFE_2893 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:dfl00430]
D DFE_0306 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DFE_2699 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DFE_0171 Glu/Leu/Phe/Val dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DFE_3293 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DFE_3294 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:dfl00450]
D DFE_1142 Homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DFE_1625 methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D DFE_1106 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DFE_2331 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DFE_2054 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_1762 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_0419 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DFE_1691 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DFE_0339 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:dfl00460]
D DFE_0306 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DFE_3200 asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DFE_2221 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dfl00470]
D DFE_1228 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DFE_1266 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1362 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1363 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_0840 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DFE_0625 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DFE_1820 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DFE_2152 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D DFE_0858 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DFE_1527 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DFE_0950 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DFE_1876 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DFE_2360 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DFE_3152 putative amino acid racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D DFE_2755 diaminopimelate epimerase-like protein K01780 cntK; histidine racemase [EC:5.1.1.24]
C 00480 Glutathione metabolism [PATH:dfl00480]
D DFE_0306 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DFE_1385 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DFE_2916 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DFE_2915 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:dfl00540]
D DFE_0333 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DFE_0369 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DFE_0331 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DFE_0334 uncharacterized protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DFE_1774 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DFE_1679 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DFE_2260 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DFE_0343 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DFE_0842 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DFE_0843 3-deoxy-D-manno-octulosonate 8-phosphatephosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DFE_1268 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DFE_1267 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DFE_0965 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DFE_0057 uncharacterized protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D DFE_2392 lipid A 3-O-deacylase-related protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DFE_2369 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DFE_2654 RfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DFE_1649 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DFE_0164 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DFE_1233 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D DFE_1650 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DFE_1121 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D DFE_0244 glycosyl transferase group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dfl00541]
D DFE_0277 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DFE_1624 uncharacterized protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2843 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2574 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2303 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DFE_2561 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DFE_0887 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DFE_2658 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D DFE_3044 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DFE_0440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DFE_2002 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DFE_0439 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DFE_2001 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DFE_2582 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DFE_2298 GDP-L-fucose synthetase-related K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DFE_2605 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D DFE_2930 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DFE_2602 neuC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DFE_2839 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D DFE_2838 capsular polysaccharide synthesis enzyme CapF K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D DFE_2837 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D DFE_2960 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DFE_2301 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DFE_2302 WblC protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:dfl00550]
D DFE_1684 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DFE_1816 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DFE_1817 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DFE_1820 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DFE_1823 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DFE_1266 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1362 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1363 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1822 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DFE_1904 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DFE_0981 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DFE_1821 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DFE_1818 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DFE_0346 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DFE_2940 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DFE_1824 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:dfl00552]
D DFE_0981 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:dfl00543]
D DFE_2631 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D DFE_0824 membrane bound O-acyl transferase, MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D DFE_2819 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D DFE_2630 alginate O-acetyltransferase K19295 algJ; alginate O-acetyltransferase complex protein AlgJ
D DFE_3231 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DFE_0522 fucose 4-O-acetylase and related acetyltransferase-like protein K13663 gumF; acyltransferase [EC:2.3.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dfl00730]
D DFE_2326 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DFE_1164 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DFE_1469 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D DFE_3229 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DFE_1468 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D DFE_0551 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DFE_1467 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DFE_1837 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D DFE_1470 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DFE_1838 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DFE_3216 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DFE_0831 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DFE_0903 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:dfl00740]
D DFE_2225 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DFE_2223 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DFE_3246 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D DFE_2226 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DFE_2224 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DFE_2795 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DFE_1837 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D DFE_1512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:dfl00750]
D DFE_1277 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D DFE_0886 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D DFE_1220 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dfl00760]
D DFE_1034 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DFE_1033 quinolinate synthetase complex subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D DFE_1032 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DFE_1379 purine nucleoside phosphorylase I K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DFE_2460 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DFE_1571 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DFE_2195 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DFE_0208 nadD; probable nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DFE_2993 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DFE_1258 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D DFE_2998 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D DFE_1613 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D DFE_1175 ppnK; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DFE_0320 pntA; pyridine nucleotide transhydrogenase, alpha subunit part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DFE_0321 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DFE_0319 pntB; NAD(P)(+) transhydrogenase, beta component K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D DFE_2439 putative methylisocitrate lyase K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
C 00770 Pantothenate and CoA biosynthesis [PATH:dfl00770]
D DFE_0749 acetolactate synthase large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0524 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DFE_0750 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_0523 amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_2474 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DFE_0751 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DFE_2642 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DFE_2154 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DFE_1566 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DFE_2893 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DFE_2144 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DFE_2662 phosphopantothenoylcysteinedecarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DFE_2993 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DFE_1113 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DFE_0885 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DFE_1169 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1541 class IV aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:dfl00780]
D DFE_1332 methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D DFE_2220 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DFE_2188 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_2218 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_0332 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DFE_1334 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DFE_1330 bioA; adenosylmethionine-8-amino-7-oxononanoateaminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DFE_1331 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DFE_2983 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DFE_3335 radical SAM domain-containing protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D DFE_1096 BirA, biotin-(Acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:dfl00785]
D DFE_0421 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DFE_0422 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1600 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D DFE_1601 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D DFE_0916 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DFE_1599 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:dfl00790]
D DFE_1204 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D DFE_0961 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DFE_0273 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DFE_1692 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DFE_2225 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DFE_1324 trpG; anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D DFE_1325 chorismate binding-like protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D DFE_1326 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D DFE_2184 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DFE_1929 queF; NADPH-dependent 7-cyano-7-deazaguaninereductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DFE_1005 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D DFE_3178 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D DFE_0631 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DFE_1238 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DFE_3046 molybdenum cofactor synthesis domain-containing protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DFE_2744 molybdenum cofactor synthesis domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DFE_2745 molybdenum cofactor synthesis domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DFE_0633 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:dfl00670]
D DFE_2146 bifunctional 5,10-methylene-tetrahydrofolatedehydrogenase/5,10-methylene-tetrahydrofolatecyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DFE_2221 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DFE_3082 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DFE_2610 phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DFE_2647 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DFE_2592 uncharacterized protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DFE_1526 predicted methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DFE_0916 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DFE_1142 Homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DFE_1625 methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D DFE_0238 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D DFE_3054 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DFE_1543 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DFE_0585 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dfl00860]
D DFE_2212 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DFE_0906 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DFE_2969 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DFE_1923 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DFE_2367 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DFE_3081 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D DFE_0908 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D DFE_1925 AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D DFE_2970 DNA-binding protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D DFE_1921 radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase
D DFE_1924 radical SAM protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D DFE_0070 putative Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DFE_1022 anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D DFE_1303 cobalt chelatase family protein K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D DFE_1018 cobI_1; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D DFE_2967 cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D DFE_3286 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D DFE_2968 cobalamin (Vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D DFE_2976 cbiD; putative cobalt-precorrin-6A synthase [deacetylating] K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D DFE_2975 precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D DFE_0012 cbiC; cobalt-precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D DFE_2977 cobB; cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DFE_3073 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DFE_3111 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DFE_0472 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DFE_3030 cobalamin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DFE_2900 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DFE_3058 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dfl00130]
D DFE_2951 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DFE_1464 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D DFE_1512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DFE_2962 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DFE_0902 uncharacterized protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D DFE_3185 radical SAM protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D DFE_2773 amidohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D DFE_2958 purine/other phosphorylase family 1 K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D DFE_1581 radical SAM protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D DFE_2957 uncharacterized protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D DFE_0972 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dfl00900]
D DFE_0551 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DFE_1906 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DFE_1109 2-C-methyl-D-erythritol 4-phosphatecytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D DFE_0724 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DFE_0544 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DFE_1256 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DFE_1512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DFE_0921 NUDIX hydrolase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D DFE_0550 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DFE_2956 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DFE_1904 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DFE_2739 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DFE_1149 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:dfl00523]
D DFE_3044 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DFE_0440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DFE_2002 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DFE_0439 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:dfl01054]
D DFE_2152 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:dfl01055]
D DFE_2112 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DFE_0440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:dfl00332]
D DFE_3243 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DFE_0207 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:dfl00261]
D DFE_2112 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DFE_2054 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_1762 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D DFE_0881 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DFE_1542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DFE_0857 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DFE_0791 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:dfl00521]
D DFE_0284 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DFE_2159 phosphohexose mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DFE_0920 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DFE_3044 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DFE_0440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DFE_2002 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DFE_0439 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DFE_0284 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:dfl00525]
D DFE_3044 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DFE_0440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:dfl00401]
D DFE_3010 prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2996 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_2203 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:dfl00405]
D DFE_1569 yddE; uncharacterized isomerase yddE K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D DFE_3011 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DFE_3012 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DFE_0574 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DFE_2188 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_2218 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DFE_2219 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D DFE_2891 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D DFE_3152 putative amino acid racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D DFE_0810 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation [PATH:dfl00627]
D DFE_2233 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DFE_1512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D DFE_1488 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DFE_1492 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D DFE_1489 nitrogenase molybdenum-iron protein subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:dfl00633]
D DFE_2686 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D DFE_3070 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D DFE_3071 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dfl03020]
D DFE_0378 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DFE_0379 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DFE_0416 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DFE_1240 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dfl03010]
D DFE_3187 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DFE_1900 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DFE_0397 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DFE_0415 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DFE_0408 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DFE_1227 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DFE_0387 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DFE_0405 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DFE_1848 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DFE_0390 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DFE_0414 rpsK; 30s ribosomal protein s11 K02948 RP-S11; small subunit ribosomal protein S11
D DFE_0386 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DFE_0413 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DFE_0404 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DFE_1197 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DFE_2140 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DFE_0400 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DFE_1226 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DFE_0395 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DFE_0897 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DFE_1061 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DFE_0375 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DFE_0394 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DFE_0391 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DFE_0392 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DFE_0403 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DFE_0406 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DFE_0377 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DFE_1225 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DFE_0376 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DFE_0374 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DFE_1847 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DFE_0401 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DFE_0410 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DFE_0398 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DFE_0417 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DFE_0407 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DFE_2136 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DFE_2401 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DFE_3240 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DFE_0396 rplV2; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DFE_0393 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DFE_0402 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DFE_0722 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DFE_3241 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DFE_2213 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DFE_0399 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DFE_0409 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DFE_0365 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DFE_2215 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DFE_0371 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DFE_2402 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DFE_r0001 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dfl00970]
D DFE_t0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0062 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0054 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0057 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DFE_t0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DFE_t0047 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DFE_t0060 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DFE_t0053 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DFE_t0029 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DFE_t0035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DFE_t0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DFE_t0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DFE_t0061 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0018 tRNA-His K14226 tRNA-His; tRNA His
D DFE_t0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DFE_t0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DFE_t0007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DFE_t0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0044 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DFE_t0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DFE_t0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DFE_t0040 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0015 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0039 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0022 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DFE_t0056 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DFE_t0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DFE_t0037 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DFE_t0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0011 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0005 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DFE_t0051 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DFE_t0002 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DFE_t0006 tRNA-Val K14237 tRNA-Val; tRNA Val
D DFE_t0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D DFE_t0036 tRNA-Val K14237 tRNA-Val; tRNA Val
D DFE_t0058 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D DFE_2212 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DFE_0432 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DFE_1172 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DFE_0433 glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DFE_2466 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DFE_2255 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DFE_2645 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DFE_3251 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DFE_0895 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DFE_0896 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DFE_2404 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DFE_2560 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DFE_1691 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DFE_1110 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DFE_0339 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DFE_2647 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DFE_2592 uncharacterized protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DFE_1526 predicted methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DFE_3080 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DFE_2229 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DFE_1023 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DFE_0326 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DFE_0573 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DFE_0545 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DFE_2644 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DFE_2400 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DFE_2399 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DFE_2952 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DFE_1676 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dfl03060]
D DFE_0411 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DFE_0372 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DFE_0925 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DFE_1038 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DFE_2358 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DFE_2120 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DFE_2141 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DFE_3250 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DFE_0741 twin-arginine translocation protein, TatA/Efamily subunit K03116 tatA; sec-independent protein translocase protein TatA
D DFE_1632 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D DFE_1631 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D DFE_2446 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DFE_1024 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dfl04122]
D DFE_3229 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DFE_1753 uncharacterized protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DFE_0431 trmU; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DFE_2258 thiamine biosynthesis protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DFE_0631 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DFE_2696 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D DFE_1238 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DFE_3046 molybdenum cofactor synthesis domain-containing protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DFE_1466 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D DFE_1469 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:dfl03018]
D DFE_2101 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D DFE_2145 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DFE_1198 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DFE_3129 rhlE-2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DFE_2261 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DFE_0100 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DFE_2703 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DFE_0719 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DFE_2927 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DFE_0085 beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DFE_0435 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DFE_3110 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DFE_2776 metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dfl03030]
D DFE_2988 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DFE_2185 subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DFE_1168 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DFE_2997 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DFE_2231 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DFE_2714 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DFE_1223 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DFE_1058 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DFE_1371 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_A0032 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_2166 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DFE_2135 ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DFE_0790 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dfl03410]
D DFE_1655 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DFE_1093 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DFE_0362 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DFE_2090 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DFE_3169 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DFE_0587 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DFE_0423 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DFE_0790 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dfl03420]
D DFE_0890 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DFE_3120 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DFE_0786 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D DFE_1516 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DFE_3264 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DFE_0790 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:dfl03430]
D DFE_0952 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D DFE_1059 mutS; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DFE_1230 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DFE_3264 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DFE_0547 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DFE_0549 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DFE_0423 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DFE_1371 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_A0032 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_2185 subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DFE_2714 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DFE_1168 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DFE_2231 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DFE_2997 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DFE_2988 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DFE_0790 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:dfl03440]
D DFE_0423 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DFE_1371 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_A0032 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_0894 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DFE_1166 recombination protein RecR K06187 recR; recombination protein RecR
D DFE_2256 recA; recombination protein A K03553 recA; recombination protein RecA
D DFE_0236 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DFE_0237 ruvB; holliday junction dna helicase ruvb protein K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DFE_0235 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DFE_1165 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DFE_2185 subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DFE_2714 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DFE_1168 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DFE_2231 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DFE_2997 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DFE_2988 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DFE_0278 primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dfl02010]
D DFE_0636 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D DFE_0637 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein
D DFE_0638 ABC transporter K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D DFE_1496 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DFE_1497 molybdate ABC transporter inner membrane subunit K02018 modB; molybdate transport system permease protein
D DFE_1498 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DFE_0116 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K05776 modF; molybdate transport system ATP-binding protein
D DFE_2816 potD; extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DFE_2813 binding-protein-dependent transport system inner membrane protein K11070 potC; spermidine/putrescine transport system permease protein
D DFE_2814 binding-protein-dependent transport system inner membrane protein K11071 potB; spermidine/putrescine transport system permease protein
D DFE_2815 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D DFE_0316 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DFE_2743 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DFE_3317 glycine betaine ABC transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DFE_0317 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D DFE_0318 glycine/betaine/L-proline ABC transporter ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DFE_0868 uncharacterized protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DFE_2107 mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DFE_0870 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DFE_2109 organic solvents resistance ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DFE_2108 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DFE_0298 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D DFE_1867 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D DFE_1869 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D DFE_0297 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D DFE_0296 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D DFE_1870 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D DFE_1868 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D DFE_0295 monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D DFE_0782 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D DFE_2501 extracellular solute-binding protein family 1 K17321 glpV; glycerol transport system substrate-binding protein
D DFE_2504 sugar abc transporter, permease protein K17322 glpP; glycerol transport system permease protein
D DFE_2503 malG; protein MalG K17323 glpQ; glycerol transport system permease protein
D DFE_2506 toluene ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D DFE_2505 ABC transporter related protein K17325 glpT; glycerol transport system ATP-binding protein
D DFE_0508 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D DFE_3201 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DFE_3202 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D DFE_3203 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D DFE_3210 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DFE_1475 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D DFE_1477 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D DFE_1478 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D DFE_1476 phosphonate ABC transporter ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D DFE_0761 glnH; ABC transporter glutamine-binding protein glnH K10036 glnH; glutamine transport system substrate-binding protein
D DFE_0764 glutamine ABC transporter, periplasmic glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D DFE_0762 polar amino acid ABC transporter inner membrane subunit K10037 glnP; glutamine transport system permease protein
D DFE_0763 methionine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D DFE_1639 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2451 putative ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_0707 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2062 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2370 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_3313 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_3315 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_0618 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2335 uncharacterized protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_1638 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DFE_0705 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_2063 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_2371 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_3312 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_1637 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_0706 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_2064 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein
D DFE_2372 livM4; LivM4 protein K01998 livM; branched-chain amino acid transport system permease protein
D DFE_3311 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_1636 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_0703 ABC transporter-like protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_2061 livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_2373 livG4; protein LivG4 K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_3310 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_1635 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_0708 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_2065 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_2374 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_3309 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_1969 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D DFE_3098 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein
D DFE_1967 ABC-3 protein K09816 znuB; zinc transport system permease protein
D DFE_1968 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DFE_0521 cobalamin (vitamin B12) biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D DFE_1301 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D DFE_1302 iron ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DFE_1536 ABC-type Co2+ transport system, periplasmic component K10094 cbiK; nickel transport protein
D DFE_1300 additional component of nickel ABC transport system K16915 cbiL; nickel transport protein
D DFE_0327 lipoprotein releasing system transmembrane protein LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D DFE_0328 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DFE_1642 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D DFE_1644 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D DFE_1645 heme-transporting ATPase K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D DFE_0979 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D DFE_0978 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D DFE_0846 sulfate-transporting ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DFE_2637 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DFE_2638 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DFE_0967 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DFE_0286 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DFE_0287 peptide-transporting ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS) [PATH:dfl02060]
D DFE_2130 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DFE_2131 phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D DFE_0851 phosphotransferase system enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DFE_0853 uncharacterized protein K02795 manY; mannose PTS system EIIC component
D DFE_2132 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D DFE_0849 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:dfl03070]
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
D DFE_0372 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DFE_0925 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DFE_0411 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DFE_1038 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DFE_2358 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DFE_2120 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DFE_3250 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DFE_2141 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DFE_0741 twin-arginine translocation protein, TatA/Efamily subunit K03116 tatA; sec-independent protein translocase protein TatA
D DFE_1632 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D DFE_1631 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D DFE_A0052 uncharacterized protein K03203 virB8; type IV secretion system protein VirB8
D DFE_A0048 type II secretion system protein E K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D DFE_A0047 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dfl02020]
D DFE_3211 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DFE_0508 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D DFE_3201 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DFE_2803 response regulator receiver K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DFE_0931 signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D DFE_0932 ompR; two-component response transcriptional regulator OmpR family K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D DFE_0725 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_2004 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_0381 putative membrane-fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D DFE_3226 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D DFE_3225 heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D DFE_0942 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0943 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2105 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2171 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0352 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_1910 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2355 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_1249 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D DFE_1976 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D DFE_1378 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_0132 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2179 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2679 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D DFE_0240 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D DFE_2713 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D DFE_3051 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DFE_3104 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D DFE_1806 gacS; putative hybrid sensor K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D DFE_1179 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D DFE_2500 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D DFE_1392 flp/fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D DFE_1394 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DFE_1395 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D DFE_1397 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D DFE_1398 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DFE_1399 bacterial type II secretion system F domain protein K12510 tadB; tight adherence protein B
D DFE_1400 type II secretion system protein K12511 tadC; tight adherence protein C
D DFE_0302 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DFE_0301 glnK; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D DFE_1010 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2790 glnA_1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_0579 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DFE_0582 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DFE_1480 fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D DFE_0203 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D DFE_0161 putative response regulator receiver modulated diguanylate cyclase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DFE_0124 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DFE_2208 zinc resistance-associated protein K07803 zraP; zinc resistance-associated protein
D DFE_0447 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DFE_1283 PAS modulated sigma54 specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DFE_0847 RNA polymerase sigma 54 subunit RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D DFE_1438 sigma 54 interacting domain protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D DFE_0486 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_0773 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_2481 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_1945 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2925 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1304 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2005 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2448 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1348 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1383 sensory box protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1668 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1427 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3132 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1524 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3174 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1882 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1894 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2831 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3301 methyl-accepting chemotaxis sensory transducer, class 34H K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0055 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0195 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0231 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0324 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0489 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_1360 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0889 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_3300 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0168 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0491 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0772 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0490 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0771 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1250 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1598 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_2873 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0671 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1538 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0484 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_0774 protein glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_1257 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1275 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1406 sensory box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D DFE_2651 autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D DFE_2436 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DFE_3324 TRAP dicarboxylate transporter subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DFE_1202 sigma-54 factor interaction domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D DFE_2068 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D DFE_2364 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_0535 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_1299 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_2319 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_0649 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D DFE_1759 cytochrome b/b6 family protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DFE_0064 cytochrome c class I K08738 CYC; cytochrome c
D DFE_2918 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DFE_2917 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
D DFE_2532 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D DFE_2548 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DFE_2602 neuC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DFE_0444 putative multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_1338 PAS sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_1788 multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_0156 multi-sensor hybrid histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D DFE_0086 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DFE_1177 putative anti-sigma-28 factor, FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dfl02024]
D DFE_2651 autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D DFE_3011 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DFE_3012 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DFE_1569 yddE; uncharacterized isomerase yddE K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D DFE_1438 sigma 54 interacting domain protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D DFE_1346 solute-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DFE_2519 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DFE_1345 transport system permease transmembrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DFE_2521 putative ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DFE_2520 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DFE_1344 ABC-type transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DFE_2518 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DFE_1639 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2451 putative ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_0707 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2062 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2370 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_3313 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_3315 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_0618 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2335 uncharacterized protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_1638 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DFE_0705 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_2063 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_2371 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_3312 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_1637 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_0706 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_2064 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein
D DFE_2372 livM4; LivM4 protein K01998 livM; branched-chain amino acid transport system permease protein
D DFE_3311 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_1636 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_0703 ABC transporter-like protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_2061 livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_2373 livG4; protein LivG4 K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_3310 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_1635 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_0708 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_2065 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_2374 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_3309 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_0335 uncharacterized protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D DFE_0559 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_0704 fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_2364 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_0535 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_1299 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_2319 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_2223 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DFE_0360 uncharacterized protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D DFE_0382 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D DFE_2411 family 5 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_1320 peptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_2471 family 5 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_0665 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_2412 ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DFE_2470 dppB3; dipeptide transport system permease DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DFE_3139 ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DFE_2413 binding-protein-dependent transporter inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DFE_2469 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DFE_3138 ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DFE_2414 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DFE_2468 dppD2; oligopeptide atp-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DFE_2242 oligopeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DFE_2985 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DFE_2358 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DFE_0372 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DFE_0925 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DFE_0411 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DFE_1038 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DFE_2120 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DFE_3250 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DFE_2141 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DFE_3104 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:dfl02030]
D DFE_1945 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2925 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1304 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2005 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2448 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1348 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1383 sensory box protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1668 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1427 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3132 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1524 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3174 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1882 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1894 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2831 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3301 methyl-accepting chemotaxis sensory transducer, class 34H K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0055 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0195 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0231 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0324 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0782 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D DFE_0491 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0772 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0489 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_1360 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0889 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_3300 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0168 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0490 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0771 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1250 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1598 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_2873 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0671 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1538 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1029 putative chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D DFE_2428 putative inhibitor of MCP methylation, CheC K03409 cheX; chemotaxis protein CheX
D DFE_0505 putative chemotaxis phosphatase, CheX K03409 cheX; chemotaxis protein CheX
D DFE_2483 chemotaxis protein CheC K03409 cheX; chemotaxis protein CheX
D DFE_0484 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_0774 protein glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_1257 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1275 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_2874 cheD; probable chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DFE_2297 cheD; probable chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DFE_0486 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_0773 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_2481 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_2621 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DFE_1971 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DFE_2675 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DFE_1976 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D DFE_1378 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_0132 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2179 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2679 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D DFE_1975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D DFE_1377 OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB
D DFE_0133 motB3; MotB3 protein K02557 motB; chemotaxis protein MotB
D DFE_2178 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2677 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2678 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:dfl02040]
D DFE_2619 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DFE_2620 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DFE_2621 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DFE_2622 H+ transporting two-sector ATPase E subunit K02411 fliH; flagellar assembly protein FliH
D DFE_2623 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DFE_2898 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D DFE_2175 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D DFE_1251 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL
D DFE_2676 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D DFE_1971 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DFE_2675 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DFE_2674 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D DFE_2673 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DFE_2672 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DFE_1244 flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D DFE_1246 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DFE_1245 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DFE_1186 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DFE_2617 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DFE_2618 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DFE_0936 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DFE_2174 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DFE_0937 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D DFE_2167 uncharacterized protein K02390 flgE; flagellar hook protein FlgE
D DFE_2173 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D DFE_1188 uncharacterized protein K02391 flgF; flagellar basal-body rod protein FlgF
D DFE_1187 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DFE_1185 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D DFE_1184 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D DFE_1183 peptidase M23 K02395 flgJ; peptidoglycan hydrolase FlgJ
D DFE_0938 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DFE_1181 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DFE_0939 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DFE_1180 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DFE_0942 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0943 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2105 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2171 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0352 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_1910 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2355 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0940 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D DFE_1911 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D DFE_1912 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D DFE_1976 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D DFE_1378 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_0132 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2179 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2679 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D DFE_1975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D DFE_1377 OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB
D DFE_0133 motB3; MotB3 protein K02557 motB; chemotaxis protein MotB
D DFE_2178 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2677 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2678 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_0086 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DFE_1177 putative anti-sigma-28 factor, FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D DFE_1057 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D DFE_1202 sigma-54 factor interaction domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D DFE_0847 RNA polymerase sigma 54 subunit RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D DFE_2068 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D DFE_1249 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DFE_2145 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D DFE_1142 Homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:dfl01501]
D DFE_0506 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DFE_1556 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_2294 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_1557 hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DFE_0382 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
D DFE_0346 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DFE_2940 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DFE_1824 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:dfl01502]
D DFE_3051 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DFE_1266 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1362 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1363 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1228 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DFE_1822 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DFE_1821 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DFE_1818 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dfl01503]
D DFE_0931 signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D DFE_0932 ompR; two-component response transcriptional regulator OmpR family K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D DFE_0735 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DFE_3194 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DFE_0725 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_2004 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_1556 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_2294 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_1557 hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
D DFE_0333 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dfl01000]
C 01001 Protein kinases [BR:dfl01001]
D DFE_0511 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DFE_3075 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DFE_2409 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D DFE_1531 predicted anti-sigma F protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D DFE_2545 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D DFE_3211 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DFE_0931 signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D DFE_1806 gacS; putative hybrid sensor K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D DFE_0118 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D DFE_0579 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DFE_0161 putative response regulator receiver modulated diguanylate cyclase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DFE_0093 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_0646 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_0650 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_2462 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_1429 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_1437 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_3105 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_2345 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_0491 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0772 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_1406 sensory box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D DFE_0444 putative multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_1338 PAS sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_1788 multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_0667 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D DFE_0670 two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:dfl01009]
D DFE_2885 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DFE_2272 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D DFE_0512 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D DFE_2088 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:dfl01002]
D DFE_1024 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DFE_3020 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DFE_1393 peptidase A24A, prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DFE_1089 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D DFE_1633 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DFE_0342 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DFE_1040 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DFE_1046 glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DFE_3191 glucosamine/fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DFE_1390 ThiJ/PfpI domain-containing protein K05520 yhbO; deglycase [EC:3.5.1.124]
D DFE_2564 peptidase c56 protein K05520 yhbO; deglycase [EC:3.5.1.124]
D DFE_1835 intracellular protease/amidase K05520 yhbO; deglycase [EC:3.5.1.124]
D DFE_1664 Abortive infection protein K07052 K07052; CAAX protease family protein
D DFE_3051 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DFE_1575 putative uncharacterized protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D DFE_3342 metalloprotease, iron regulated K06972 PITRM1; presequence protease [EC:3.4.24.-]
D DFE_2315 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D DFE_2472 cpg; carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D DFE_1411 cpg; carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D DFE_0872 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DFE_1873 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DFE_0412 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DFE_2549 methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DFE_1572 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D DFE_2071 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DFE_0767 leucyl aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D DFE_1951 carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D DFE_0272 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DFE_2739 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DFE_3060 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DFE_1907 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DFE_0725 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_2004 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_1162 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DFE_1160 anti-sigma H sporulation factor LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DFE_2234 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DFE_1658 umuD; DNA polymerase V subunit D K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DFE_2446 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DFE_1312 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DFE_0691 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D DFE_3186 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D DFE_1592 rhomboid family protein K07059 K07059; rhomboid family protein
D DFE_0716 ATP-dependent protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DFE_0306 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DFE_2083 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DFE_0356 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DFE_2157 HflC protein K04087 hflC; modulator of FtsH protease HflC
D DFE_2158 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:dfl01003]
D DFE_1455 glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D DFE_1279 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DFE_0346 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DFE_1065 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dfl01005]
D DFE_0333 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DFE_1774 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DFE_1679 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DFE_0369 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DFE_0331 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DFE_0334 uncharacterized protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DFE_2260 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DFE_0965 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DFE_0057 uncharacterized protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D DFE_1267 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DFE_2392 lipid A 3-O-deacylase-related protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DFE_0842 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DFE_1268 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DFE_0843 3-deoxy-D-manno-octulosonate 8-phosphatephosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DFE_0343 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DFE_2654 RfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DFE_0164 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DFE_1650 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DFE_0244 glycosyl transferase group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D DFE_1121 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D DFE_2369 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DFE_1649 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DFE_1233 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dfl01011]
D DFE_1684 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DFE_1816 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DFE_1817 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DFE_1820 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DFE_1823 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DFE_1266 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1362 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1363 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DFE_1228 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DFE_0625 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DFE_1821 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DFE_1818 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DFE_0981 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DFE_2089 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DFE_0346 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DFE_2940 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DFE_1824 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DFE_3051 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DFE_1575 putative uncharacterized protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D DFE_1174 MltA domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D DFE_1579 lytic transglycosylase catalytic K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D DFE_2725 lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DFE_2608 transglycosylase, Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D DFE_1667 uncharacterized protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DFE_2772 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DFE_0735 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DFE_3194 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:dfl01004]
D DFE_0574 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DFE_2217 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DFE_2220 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DFE_2188 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_2218 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DFE_0332 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DFE_2013 putative G-D-S-L family lipolytic protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DFE_0765 SGNH-hydrolase lipoprotein, lysophospholipase L1-like subgroup K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DFE_2500 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D DFE_2450 acsA2; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2628 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2279 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DFE_2169 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_1779 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D DFE_0559 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_0704 fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_2281 AMP-binding domain-containing protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D DFE_2216 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DFE_2613 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DFE_0084 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:dfl01008]
D DFE_2112 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DFE_2152 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:dfl01006]
D DFE_0550 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DFE_2956 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DFE_1904 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DFE_1112 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DFE_2951 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DFE_0070 putative Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:dfl01007]
D DFE_2212 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DFE_2466 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DFE_2952 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DFE_1676 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DFE_1110 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DFE_0573 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DFE_0339 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DFE_1023 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DFE_3080 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DFE_2229 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DFE_0326 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DFE_2645 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DFE_3251 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DFE_2644 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DFE_0895 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DFE_0896 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DFE_2560 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DFE_0545 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DFE_2404 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DFE_2255 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DFE_2400 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DFE_2399 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DFE_2728 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DFE_2067 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DFE_0107 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D DFE_0960 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DFE_2872 class I and II aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D DFE_2996 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_2203 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DFE_0731 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DFE_1334 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DFE_1307 acetylornithine/succinyldiaminopimelateaminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DFE_1330 bioA; adenosylmethionine-8-amino-7-oxononanoateaminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DFE_2969 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DFE_1169 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_1541 class IV aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DFE_2301 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DFE_2605 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:dfl00194]
D DFE_1758 rieske (2Fe-2S) domain protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D DFE_2931 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DFE_2932 atpD-3; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DFE_2933 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DFE_2934 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DFE_2935 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DFE_2936 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DFE_2937 H+ transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DFE_2906 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DFE_2907 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DFE_2909 uncharacterized protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dfl03000]
D DFE_2980 transcription activator effector binding protein K13652 K13652; AraC family transcriptional regulator
D DFE_2498 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DFE_2507 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D DFE_1347 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DFE_1002 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DFE_2113 uncharacterized protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DFE_3320 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DFE_0794 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D DFE_1973 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DFE_0567 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D DFE_3091 regulatory protein TetR K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D DFE_0732 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D DFE_2698 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D DFE_0054 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DFE_3122 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DFE_1558 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D DFE_0188 uncharacterized protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D DFE_0565 putative transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D DFE_1966 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DFE_3344 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DFE_2329 Fur family ferric uptake regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D DFE_3047 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D DFE_1785 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D DFE_2364 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_0535 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_1299 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_2319 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DFE_2687 transcriptional regulator, Crp/Fnr family K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D DFE_3375 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D DFE_2800 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D DFE_0011 BadM/Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D DFE_3164 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DFE_1996 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DFE_2252 ziaR; transcriptional repressor smtB homolog K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D DFE_1096 BirA, biotin-(Acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DFE_1875 putative transcriptional regulator for lysine biosynthesis and transport K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D DFE_1202 sigma-54 factor interaction domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D DFE_1480 fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D DFE_0203 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D DFE_1356 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D DFE_1495 TOBE domain protein K02019 modE; molybdate transport system regulatory protein
D DFE_3321 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein
D DFE_2905 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D DFE_1205 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D DFE_0053 aldehyde Dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DFE_2655 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DFE_0720 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D DFE_0438 hrcA; heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D DFE_0058 Fis family sigma-54 specific transcriptional activator PspF K03974 pspF; psp operon transcriptional activator
D DFE_0061 phage shock protein C, PspC K03973 pspC; phage shock protein C
D DFE_0713 pyrR; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DFE_2393 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D DFE_1370 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D DFE_0252 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D DFE_0303 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D DFE_1827 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:dfl03021]
D DFE_0416 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DFE_0378 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DFE_0379 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DFE_1240 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DFE_1057 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D DFE_1143 rpoH; RNA polymerase sigma factor K03089 rpoH; RNA polymerase sigma-32 factor
D DFE_0847 RNA polymerase sigma 54 subunit RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D DFE_1249 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D DFE_1191 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D DFE_2227 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D DFE_0373 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D DFE_2182 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DFE_1529 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DFE_2181 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DFE_0560 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DFE_2410 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DFE_2409 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D DFE_1531 predicted anti-sigma F protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D DFE_2393 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D DFE_1370 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D DFE_0252 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D DFE_0303 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D DFE_2235 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D DFE_0719 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dfl03019]
D DFE_2101 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D DFE_2170 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DFE_0085 beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DFE_2927 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DFE_2261 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DFE_2196 putative HD superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D DFE_3129 rhlE-2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DFE_0100 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DFE_2703 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DFE_2145 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DFE_1198 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DFE_0719 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DFE_0519 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DFE_0435 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DFE_3110 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DFE_2776 metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DFE_1179 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D DFE_0850 UPF0042 nucleotide-binding protein DESAM_21978 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:dfl03011]
D DFE_3187 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DFE_1900 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DFE_0397 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DFE_0415 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DFE_0408 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DFE_1227 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DFE_0387 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DFE_0405 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DFE_1848 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DFE_0390 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DFE_0414 rpsK; 30s ribosomal protein s11 K02948 RP-S11; small subunit ribosomal protein S11
D DFE_0386 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DFE_0413 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DFE_0404 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DFE_1197 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DFE_2140 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DFE_0400 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DFE_1226 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DFE_0395 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DFE_0897 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DFE_1061 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DFE_0375 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DFE_0394 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DFE_0391 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DFE_0392 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DFE_0403 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DFE_0406 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DFE_1225 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DFE_0376 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DFE_0374 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DFE_0377 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DFE_1847 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DFE_0401 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DFE_0410 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DFE_0398 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DFE_0417 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DFE_0407 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DFE_2136 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DFE_2401 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DFE_3240 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DFE_0396 rplV2; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DFE_0393 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DFE_0402 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DFE_3241 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DFE_2213 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DFE_0399 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DFE_0409 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DFE_0365 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DFE_2215 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DFE_0371 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DFE_2402 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DFE_0722 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DFE_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0001 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dfl03009]
D DFE_2170 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DFE_2681 era; GTPase Era K03595 era; GTPase
D DFE_3242 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D DFE_2393 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D DFE_1370 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D DFE_0252 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D DFE_0303 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D DFE_1191 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D DFE_2227 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D DFE_0373 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D DFE_1064 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DFE_2649 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DFE_1114 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DFE_0914 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DFE_2704 tRNA/rRNA cytosine-C5-methylase K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D DFE_0575 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DFE_1826 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DFE_2133 ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DFE_1211 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D DFE_2724 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DFE_0233 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DFE_0577 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DFE_2640 rlmI; ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DFE_2732 putative RNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D DFE_2777 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DFE_3040 23S rRNA (Uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DFE_0814 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DFE_0969 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DFE_2710 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DFE_0602 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DFE_1593 dephospho-CoA kinase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DFE_0922 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DFE_1357 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D DFE_2138 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D DFE_3188 MiaB-like tRNA modifying protein YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DFE_0249 TPR domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D DFE_1309 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DFE_2101 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D DFE_1666 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DFE_0100 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DFE_2703 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DFE_0831 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DFE_1170 der; GTPase Der K03977 engA; GTPase
D DFE_2614 GTP-binding proten HflX K03665 hflX; GTPase
D DFE_1281 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DFE_1319 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DFE_1194 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DFE_1190 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D DFE_1128 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D DFE_0257 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D DFE_1884 UPF0307 protein PSJM300_03775 K09889 yjgA; ribosome-associated protein
D DFE_0848 sigma 54 modulation protein/ribosomal proteinS30EA domain protein K05808 hpf; ribosome hibernation promoting factor
D DFE_3086 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D DFE_2214 uncharacterized protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:dfl03016]
D DFE_0958 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DFE_1097 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DFE_2212 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DFE_0545 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DFE_1023 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DFE_2229 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DFE_0339 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DFE_2466 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DFE_0573 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DFE_0326 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DFE_2645 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DFE_2255 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DFE_3251 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DFE_2404 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DFE_2560 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DFE_1110 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DFE_3080 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DFE_2644 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DFE_2400 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DFE_2399 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DFE_2952 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DFE_1676 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DFE_2183 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DFE_2770 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DFE_2099 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D DFE_2896 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DFE_1196 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DFE_3229 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DFE_1281 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DFE_1112 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DFE_2264 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DFE_0871 tRNA uridine 5-carboxymethylaminomethylmodification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DFE_0419 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DFE_2612 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D DFE_2999 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D DFE_0815 ABC transporter-like protein K06020 ettA; energy-dependent translational throttle protein EttA
D DFE_0895 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DFE_0896 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DFE_0839 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DFE_1255 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DFE_1616 MiaB family RNA modification protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DFE_0430 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DFE_3085 tRNA/rRNA methyltransferase SpoU K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D DFE_2240 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DFE_2137 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DFE_1282 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D DFE_0468 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DFE_2087 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D DFE_0814 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DFE_0431 trmU; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DFE_2258 thiamine biosynthesis protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DFE_1672 PP-loop domain-containing protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D DFE_1242 PP-loop domain-containing protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DFE_1753 uncharacterized protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DFE_2664 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DFE_2184 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DFE_1929 queF; NADPH-dependent 7-cyano-7-deazaguaninereductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DFE_2102 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D DFE_1656 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DFE_0904 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DFE_1908 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DFE_1072 glycoprotease family metalloendopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DFE_0882 uncharacterized protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DFE_2261 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DFE_1198 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:dfl03012]
D DFE_1192 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DFE_2403 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DFE_1546 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DFE_1901 translation elongation factor Ts K02357 tsf; elongation factor Ts
D DFE_0389 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DFE_0370 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DFE_0388 translation elongation factor G K02355 fusA; elongation factor G
D DFE_1068 translation elongation factor G K02355 fusA; elongation factor G
D DFE_0082 elongation factor G K02355 fusA; elongation factor G
D DFE_1687 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D DFE_0367 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DFE_1903 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D DFE_0368 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DFE_0721 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DFE_0262 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DFE_0975 efp; elongation factor P K02356 efp; elongation factor P
D DFE_0863 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DFE_2422 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:dfl03110]
D DFE_0779 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D DFE_0189 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DFE_1161 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DFE_0715 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DFE_2272 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D DFE_0435 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DFE_3110 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DFE_1239 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DFE_1584 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D DFE_0187 heat shock protein DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D DFE_0437 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D DFE_2080 Hsp20; heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D DFE_3059 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D DFE_2381 heat shock protein HSP20 K13993 HSP20; HSP20 family protein
D DFE_2079 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D DFE_3109 chaperonin Cpn10 K04078 groES; chaperonin GroES
D DFE_0725 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_2004 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D DFE_0272 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DFE_2907 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DFE_0250 methyltransferase small K21804 METTL21A; protein N-lysine methyltransferase METTL21A [EC:2.1.1.-]
D DFE_0944 uncharacterized protein K06006 cpxP; periplasmic protein CpxP/Spy
D DFE_2208 zinc resistance-associated protein K07803 zraP; zinc resistance-associated protein
D DFE_0701 hypA; probable hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DFE_0700 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D DFE_2044 cyclophilin type peptidyl-prolyl cis-transisomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DFE_0683 cyclophilin type peptidyl-prolyl cis-transisomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DFE_2050 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DFE_2454 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D DFE_0892 SurA domain-containing protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DFE_1071 trxA; thioredoxin K03671 TXN; thioredoxin
D DFE_3156 thioredoxin domain-containing protein K03671 TXN; thioredoxin
D DFE_0804 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
C 04131 Membrane trafficking [BR:dfl04131]
D DFE_1317 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DFE_1043 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DFE_2193 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DFE_0364 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DFE_3329 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DFE_2272 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D DFE_1944 uncharacterized protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:dfl03051]
D DFE_2272 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:dfl03032]
D DFE_2166 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DFE_0819 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_1063 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_1407 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DFE_3084 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_2771 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D DFE_0860 HU_IHF family transcriptional regulator K05788 ihfB; integration host factor subunit beta
D DFE_0240 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D DFE_2713 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D DFE_1223 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DFE_1058 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DFE_1371 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_A0032 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_2185 subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DFE_2714 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DFE_2231 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DFE_2997 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DFE_2988 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DFE_1168 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DFE_2135 ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DFE_0790 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DFE_2716 DNA gyrase subunit alpha K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DFE_2715 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DFE_2682 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DFE_2875 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D DFE_A0045 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dfl03036]
D DFE_2170 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DFE_0819 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_1063 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_1407 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DFE_3084 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_2771 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D DFE_0860 HU_IHF family transcriptional regulator K05788 ihfB; integration host factor subunit beta
D DFE_0187 heat shock protein DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D DFE_0240 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D DFE_2713 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D DFE_2498 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DFE_0054 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DFE_3122 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DFE_1814 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DFE_1076 septum formation initiator K05589 ftsB; cell division protein FtsB
D DFE_2638 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DFE_1824 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DFE_0974 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DFE_1815 POTRA domain, FtsQ-type family protein K03589 ftsQ; cell division protein FtsQ
D DFE_1819 ftsW; lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D DFE_2637 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DFE_1813 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DFE_2928 uncharacterized protein K09888 zapA; cell division protein ZapA
D DFE_2929 uncharacterized protein K09892 zapB; cell division protein ZapB
D DFE_0735 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DFE_3194 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DFE_1556 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_2294 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_0746 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D DFE_2943 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DFE_0919 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DFE_2942 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DFE_2939 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D DFE_0488 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D DFE_A0037 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D DFE_2657 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D DFE_2655 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DFE_0871 tRNA uridine 5-carboxymethylaminomethylmodification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DFE_0575 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DFE_2240 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DFE_0496 tyrosine recombinase xerC K03733 xerC; integrase/recombinase XerC
D DFE_0959 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DFE_A0029 filamentation induced by cAMP protein fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DFE_0977 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:dfl03400]
D DFE_2945 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DFE_2721 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DFE_1093 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DFE_0362 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DFE_1655 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DFE_1280 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DFE_1544 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DFE_1306 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DFE_3169 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DFE_2090 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DFE_0587 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DFE_0423 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DFE_0790 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DFE_3120 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DFE_0786 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D DFE_1516 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DFE_3264 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DFE_0378 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DFE_0379 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DFE_0416 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DFE_1240 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DFE_0890 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DFE_0952 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D DFE_1059 mutS; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DFE_1230 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DFE_0547 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DFE_0549 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DFE_2185 subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DFE_2714 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DFE_2231 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DFE_2997 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DFE_2988 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DFE_1168 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DFE_1371 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_A0032 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_1165 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DFE_2256 recA; recombination protein A K03553 recA; recombination protein RecA
D DFE_0236 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DFE_0237 ruvB; holliday junction dna helicase ruvb protein K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DFE_0235 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DFE_0278 primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DFE_1137 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DFE_0894 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DFE_1166 recombination protein RecR K06187 recR; recombination protein RecR
D DFE_3213 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DFE_2323 uncharacterized protein K03554 rdgC; recombination associated protein RdgC
D DFE_2716 DNA gyrase subunit alpha K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DFE_2715 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DFE_2682 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DFE_0819 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_1063 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_1407 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DFE_3084 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DFE_2771 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D DFE_0860 HU_IHF family transcriptional regulator K05788 ihfB; integration host factor subunit beta
D DFE_0311 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DFE_1659 UV repair DNA polymerase K03502 umuC; DNA polymerase V
D DFE_1658 umuD; DNA polymerase V subunit D K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DFE_2835 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DFE_1195 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:dfl03029]
D DFE_1759 cytochrome b/b6 family protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DFE_1192 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DFE_2403 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DFE_1901 translation elongation factor Ts K02357 tsf; elongation factor Ts
D DFE_0389 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DFE_0370 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DFE_0388 translation elongation factor G K02355 fusA; elongation factor G
D DFE_1068 translation elongation factor G K02355 fusA; elongation factor G
D DFE_0082 elongation factor G K02355 fusA; elongation factor G
D DFE_2681 era; GTPase Era K03595 era; GTPase
D DFE_2952 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DFE_2229 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DFE_2645 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DFE_0573 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DFE_0432 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DFE_1172 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DFE_0433 glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DFE_1371 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_A0032 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DFE_0329 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D DFE_0435 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DFE_0437 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D DFE_3110 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DFE_3109 chaperonin Cpn10 K04078 groES; chaperonin GroES
D DFE_1239 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DFE_1584 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D DFE_3229 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DFE_0070 putative Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DFE_2358 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DFE_0065 uncharacterized protein SCO1/SenC/PrrC K07152 SCO1; protein SCO1
D DFE_2272 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dfl02000]
D DFE_0967 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DFE_0286 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DFE_0287 peptide-transporting ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DFE_3126 ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D DFE_1496 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DFE_1497 molybdate ABC transporter inner membrane subunit K02018 modB; molybdate transport system permease protein
D DFE_1498 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DFE_0116 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K05776 modF; molybdate transport system ATP-binding protein
D DFE_0636 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D DFE_0637 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein
D DFE_0638 ABC transporter K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D DFE_2816 potD; extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DFE_2813 binding-protein-dependent transport system inner membrane protein K11070 potC; spermidine/putrescine transport system permease protein
D DFE_2814 binding-protein-dependent transport system inner membrane protein K11071 potB; spermidine/putrescine transport system permease protein
D DFE_2815 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D DFE_1346 solute-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DFE_2519 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DFE_1345 transport system permease transmembrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DFE_2521 putative ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DFE_2520 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DFE_1344 ABC-type transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DFE_2518 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DFE_0316 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DFE_2743 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DFE_3317 glycine betaine ABC transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DFE_0317 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D DFE_0318 glycine/betaine/L-proline ABC transporter ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DFE_1217 ABC-type transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DFE_0080 RNA polymerase sigma factor, sigma-70 family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DFE_1218 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D DFE_0782 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D DFE_2501 extracellular solute-binding protein family 1 K17321 glpV; glycerol transport system substrate-binding protein
D DFE_2504 sugar abc transporter, permease protein K17322 glpP; glycerol transport system permease protein
D DFE_2503 malG; protein MalG K17323 glpQ; glycerol transport system permease protein
D DFE_2506 toluene ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D DFE_2505 ABC transporter related protein K17325 glpT; glycerol transport system ATP-binding protein
D DFE_0298 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D DFE_1867 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D DFE_1869 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D DFE_0297 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D DFE_0296 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D DFE_1870 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D DFE_1868 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D DFE_0295 monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D DFE_3114 conserved membrane protein of unknown function K02069 STAR2; UDP-glucose/iron transport system permease protein
D DFE_3113 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D DFE_0868 uncharacterized protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DFE_2107 mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DFE_0870 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DFE_2109 organic solvents resistance ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DFE_2108 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DFE_0508 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D DFE_3201 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DFE_3202 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D DFE_3203 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D DFE_3210 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DFE_1475 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D DFE_1477 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D DFE_1478 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D DFE_1476 phosphonate ABC transporter ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D DFE_0761 glnH; ABC transporter glutamine-binding protein glnH K10036 glnH; glutamine transport system substrate-binding protein
D DFE_0764 glutamine ABC transporter, periplasmic glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D DFE_0762 polar amino acid ABC transporter inner membrane subunit K10037 glnP; glutamine transport system permease protein
D DFE_0763 methionine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D DFE_1639 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2451 putative ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_0707 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2062 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2370 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_3313 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_3315 ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_0618 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_2335 uncharacterized protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DFE_1638 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DFE_0705 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_2063 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_2371 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_3312 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D DFE_1637 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_0706 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_2064 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein
D DFE_2372 livM4; LivM4 protein K01998 livM; branched-chain amino acid transport system permease protein
D DFE_3311 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DFE_1636 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_0703 ABC transporter-like protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_2061 livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_2373 livG4; protein LivG4 K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_3310 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DFE_1635 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_0708 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_2065 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_2374 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_3309 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DFE_1314 uncharacterized protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D DFE_1315 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D DFE_1316 ABC transporter K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D DFE_0436 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0595 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0799 family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_2986 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_2867 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1056 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1663 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0131 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0163 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0179 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0190 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1189 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1787 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_2201 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0294 family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1545 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1842 putative glutamine ABC transporter/glutamine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1861 family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_3198 family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_2787 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0479 family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0817 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_1805 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_2186 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_2866 uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DFE_0800 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_2868 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_2870 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_2199 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_2202 Polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_0293 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_1860 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_3199 amino acid ABC transporter membrane protein 2, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein
D DFE_1859 phosphonate-transporting ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DFE_3197 ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DFE_0801 ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DFE_2411 family 5 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_1320 peptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_2471 family 5 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_0665 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DFE_2412 ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DFE_2470 dppB3; dipeptide transport system permease DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DFE_3139 ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DFE_2413 binding-protein-dependent transporter inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DFE_2469 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DFE_3138 ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DFE_2414 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DFE_2468 dppD2; oligopeptide atp-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DFE_2242 oligopeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DFE_2985 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DFE_1019 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D DFE_1021 ABC transporter K25027 btuC; cobalamin transport system permease protein
D DFE_1020 putative iron(III) dicitrate transport ATP-binding protein FecE K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D DFE_1969 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D DFE_3098 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein
D DFE_1967 ABC-3 protein K09816 znuB; zinc transport system permease protein
D DFE_1968 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DFE_3096 ABC-type transporter, integral membrane subunit K09819 ABC.MN.P; manganese/iron transport system permease protein
D DFE_3097 ABC transporter related protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D DFE_1301 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D DFE_0521 cobalamin (vitamin B12) biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D DFE_1302 iron ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DFE_1536 ABC-type Co2+ transport system, periplasmic component K10094 cbiK; nickel transport protein
D DFE_1300 additional component of nickel ABC transport system K16915 cbiL; nickel transport protein
D DFE_0979 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D DFE_0978 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D DFE_0846 sulfate-transporting ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DFE_0327 lipoprotein releasing system transmembrane protein LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D DFE_0328 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DFE_1642 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D DFE_1644 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D DFE_1645 heme-transporting ATPase K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D DFE_2637 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DFE_2638 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DFE_2014 uncharacterized protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DFE_0073 uncharacterized protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DFE_3092 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D DFE_2164 ABC transporter membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DFE_2015 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DFE_0072 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DFE_2163 phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DFE_1591 ABC transporter-like protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DFE_1287 sodium/sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D DFE_1434 sodium/sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D DFE_3121 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D DFE_0282 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D DFE_3093 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D DFE_0611 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D DFE_2972 Drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DFE_0029 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D DFE_1944 uncharacterized protein K06902 UMF1; MFS transporter, UMF1 family
D DFE_1776 major facilitator superfamily protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D DFE_2130 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DFE_2131 phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D DFE_0851 phosphotransferase system enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DFE_0853 uncharacterized protein K02795 manY; mannose PTS system EIIC component
D DFE_2132 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D DFE_0849 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DFE_0787 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D DFE_2758 ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D DFE_3004 ammonium transporter K03320 amt; ammonium transporter, Amt family
D DFE_0300 ammonium transporter K03320 amt; ammonium transporter, Amt family
D DFE_2444 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D DFE_0079 formate/nitrite transporter K21993 fdhC; formate transporter
D DFE_2432 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D DFE_1942 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D DFE_1031 magnesium transporter K06213 mgtE; magnesium transporter
D DFE_1976 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D DFE_1378 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_0132 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2179 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2679 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D DFE_1975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D DFE_1377 OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB
D DFE_0133 motB3; MotB3 protein K02557 motB; chemotaxis protein MotB
D DFE_2178 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2677 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2678 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_1612 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ
D DFE_1611 protein TolR K03560 tolR; biopolymer transport protein TolR
D DFE_2250 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D DFE_0776 CrcB-like protein K06199 crcB; fluoride exporter
D DFE_1648 uncharacterized protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DFE_0612 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DFE_3330 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D DFE_1441 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D DFE_0290 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D DFE_1216 putative outer membrane receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
D DFE_0285 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D DFE_0382 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D DFE_2532 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D DFE_2548 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DFE_0329 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D DFE_1070 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D DFE_0845 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D DFE_0844 uncharacterized protein K11719 lptC; lipopolysaccharide export system protein LptC
D DFE_1229 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D DFE_0865 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D DFE_2633 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family
D DFE_3225 heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D DFE_1557 hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DFE_0569 acriflavin resistance protein K18989 vexF; multidrug efflux pump
D DFE_0673 EamA-like transporter family K15268 eamA; O-acetylserine/cysteine efflux transporter
D DFE_0503 uncharacterized protein K03298 TC.DME; drug/metabolite transporter, DME family
D DFE_2390 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D DFE_0360 uncharacterized protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D DFE_3290 L-lactate transport K03303 lutP; lactate permease
D DFE_1784 BCCT transporter K05020 opuD; glycine betaine transporter
D DFE_0224 putative K+-dependent Na+/Ca+ exchanger K07301 yrbG; cation:H+ antiporter
D DFE_2990 Na+/solute symporter K14393 actP; cation/acetate symporter
D DFE_2147 Kef-type K+ transport system, predicted NAD-binding component K26735 KEA4_5_6; K+:H+ antiporter
D DFE_0833 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein
D DFE_0899 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D DFE_0900 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D DFE_0834 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D DFE_0898 trkA; putative potassium transporter peripheral membrane protein K03499 trkA; trk/ktr system potassium uptake protein
D DFE_0901 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D DFE_3373 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D DFE_1623 uracil-xanthine permease K02824 uraA; uracil permease
D DFE_2650 integral membrane transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D DFE_0180 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D DFE_2796 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D DFE_2899 uncharacterized protein K07240 chrA; chromate transporter
D DFE_0984 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D DFE_0796 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D DFE_3153 sulP; sulfate transporter ybaR K03321 TC.SULP; sulfate permease, SulP family
D DFE_2379 cyclic nucleotide-binding protein K03321 TC.SULP; sulfate permease, SulP family
D DFE_0644 sulP3; sulP family sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D DFE_0651 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D DFE_2436 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DFE_3324 TRAP dicarboxylate transporter subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DFE_3050 TRAP dicarboxylate transporter subunit DctM K21393 yiaN; TRAP-type transport system large permease protein
D DFE_0015 dctQ; DctQ, TRAP-type C4-dicarboxylate transport system K21394 yiaM; TRAP-type transport system small permease protein
D DFE_3325 tripartite AtP-independent periplasmic transporter subunit DctQ K21394 yiaM; TRAP-type transport system small permease protein
D DFE_2438 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D DFE_3048 TRAP dicarboxylate transporter subunit DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D DFE_3326 family 7 extracellular solute-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D DFE_2339 Na+/Pi cotransporter K03324 yjbB; phosphate:Na+ symporter
D DFE_3165 arsenite efflux transporter ArsB K03325 ACR3; arsenite transporter
D DFE_1293 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D DFE_1294 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D DFE_1295 proton-translocating NADH-quinone oxidoreductase, chain N K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D DFE_1296 mnhA; Na(+)/H(+) antiporter subunit A K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D DFE_1298 NADH/ubiquinone/plastoquinone K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D DFE_0145 NADH/Ubiquinone/plastoquinone complex I K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D DFE_0147 NADH/Ubiquinone/plastoquinone complex I K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D DFE_1289 Na+/H+ ion antiporter subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D DFE_1290 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D DFE_1291 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D DFE_2089 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DFE_0038 auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D DFE_2497 lysine exporter protein LysE/YggA K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DFE_0154 lysine exporter protein LysE/YggA K05835 rhtC; threonine efflux protein
D DFE_2499 LysE family transporter K05835 rhtC; threonine efflux protein
D DFE_3053 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D DFE_3172 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D DFE_3173 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D DFE_3052 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D DFE_1105 conserved membrane protein of unknown function K09125 yhhQ; queuosine precursor transporter
D DFE_1930 conserved membrane protein of unknown function K09125 yhhQ; queuosine precursor transporter
D DFE_2018 multiple antibiotic resistance MarC-related protein K05595 marC; multiple antibiotic resistance protein
D DFE_1819 ftsW; lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D DFE_2632 mntP; putative manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D DFE_1840 uncharacterized protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D DFE_3193 high-affinity nickel-transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D DFE_3101 TonB family protein K03832 tonB; periplasmic protein TonB
D DFE_1608 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D DFE_1610 protein TolA K03646 tolA; colicin import membrane protein
D DFE_1609 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D DFE_3155 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D DFE_0136 nitrate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DFE_0077 formate dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DFE_1998 4Fe-4S ferredoxin K23301 qrcC; menaquinone reductase, iron-sulfur cluster-binding subunit [EC:1.97.-.-]
D DFE_1999 anaerobic dehydrogenase, typically selenocysteine-containing K23302 qrcB; menaquinone reductase, molybdopterin-binding-like subunit
D DFE_1997 polysulfide reductase NrfD K23303 qrcD; menaquinone reductase, integral membrane subunit
D DFE_3226 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D DFE_0288 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D DFE_1556 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_2294 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_0568 RND family efflux transporter, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D DFE_0381 putative membrane-fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D DFE_2545 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D DFE_2546 lipopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator
D DFE_3370 feoA family protein K04758 feoA; ferrous iron transport protein A
D DFE_3371 ferrous iron transport protein a K04758 feoA; ferrous iron transport protein A
D DFE_1865 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D DFE_3369 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D DFE_1866 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D DFE_1646 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:dfl02044]
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
D DFE_0286 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DFE_0287 peptide-transporting ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DFE_0288 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D DFE_0285 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D DFE_1986 peptidoglycan-binding domain 1 protein K02450 gspA; general secretion pathway protein A
D DFE_2544 secretion ATPase, PEP-CTERM locus subfamily K02450 gspA; general secretion pathway protein A
D DFE_1794 putative uncharacterized protein K02450 gspA; general secretion pathway protein A
D DFE_3020 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DFE_1985 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D DFE_1795 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D DFE_1984 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DFE_1796 putative type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D DFE_1793 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D DFE_1079 twitching motility protein K02669 pilT; twitching motility protein PilT
D DFE_1080 twitching motility protein K02669 pilT; twitching motility protein PilT
D DFE_1393 peptidase A24A, prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DFE_1394 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DFE_1395 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D DFE_1397 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D DFE_1398 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DFE_1399 bacterial type II secretion system F domain protein K12510 tadB; tight adherence protein B
D DFE_1400 type II secretion system protein K12511 tadC; tight adherence protein C
D DFE_1392 flp/fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D DFE_1797 uncharacterized protein K10924 mshA; MSHA pilin protein MshA
D DFE_1980 type II and III secretion system protein K12282 mshL; MSHA biogenesis protein MshL
D DFE_0745 integral membrane protein K02221 yggT; YggT family protein
D DFE_2222 zinc-binding CMP/dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DFE_1678 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D DFE_1246 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DFE_1245 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DFE_2620 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DFE_2622 H+ transporting two-sector ATPase E subunit K02411 fliH; flagellar assembly protein FliH
D DFE_2623 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DFE_2675 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DFE_2674 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D DFE_2673 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DFE_2672 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DFE_1244 flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D DFE_A0052 uncharacterized protein K03203 virB8; type IV secretion system protein VirB8
D DFE_A0048 type II secretion system protein E K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D DFE_A0047 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D DFE_A0050 COMB3 protein K12048 comB10; ComB10 competence protein
D DFE_A0051 ComB2 protein K12049 comB9; ComB9 competence protein
D DFE_A0001 type IV secretion/conjugal transfer ATPase, VirB4 family K12053 comB4; ComB4 competence protein
D DFE_2120 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DFE_0372 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DFE_0925 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DFE_0411 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DFE_2141 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DFE_3250 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DFE_1038 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DFE_2358 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DFE_0741 twin-arginine translocation protein, TatA/Efamily subunit K03116 tatA; sec-independent protein translocase protein TatA
D DFE_1632 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D DFE_1631 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dfl02042]
D DFE_1648 uncharacterized protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DFE_1012 conserved membrane protein of unknown function K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:dfl02022]
D DFE_3211 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DFE_2803 response regulator receiver K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DFE_0931 signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D DFE_0932 ompR; two-component response transcriptional regulator OmpR family K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D DFE_1428 response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator
D DFE_1806 gacS; putative hybrid sensor K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D DFE_3104 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D DFE_0118 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D DFE_0119 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D DFE_0579 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DFE_0582 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DFE_0161 putative response regulator receiver modulated diguanylate cyclase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DFE_0124 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DFE_0447 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DFE_1283 PAS modulated sigma54 specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DFE_1438 sigma 54 interacting domain protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D DFE_0093 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_0646 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_0650 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_2462 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_1429 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_1437 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_3105 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_2345 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DFE_0491 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0772 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0490 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0771 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1250 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1598 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_2873 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0671 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1538 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0484 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_0774 protein glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_1257 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1275 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1406 sensory box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D DFE_2068 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D DFE_0649 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D DFE_0444 putative multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_1338 PAS sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_1788 multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D DFE_0156 multi-sensor hybrid histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D DFE_0532 multi-sensor Hybrid Histidine Kinase K22010 pdtaR; two-component system, response regulator PdtaR
D DFE_3248 signal transduction histidine kinase K22010 pdtaR; two-component system, response regulator PdtaR
D DFE_0667 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D DFE_0670 two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:dfl02035]
D DFE_0491 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0772 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DFE_0489 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_1360 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0889 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_3300 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_0168 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D DFE_2428 putative inhibitor of MCP methylation, CheC K03409 cheX; chemotaxis protein CheX
D DFE_0505 putative chemotaxis phosphatase, CheX K03409 cheX; chemotaxis protein CheX
D DFE_2483 chemotaxis protein CheC K03409 cheX; chemotaxis protein CheX
D DFE_2874 cheD; probable chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DFE_2297 cheD; probable chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DFE_0486 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_0773 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_2481 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DFE_0484 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_0774 protein glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DFE_0490 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0771 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1250 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1598 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_2873 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_0671 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1538 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DFE_1029 putative chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D DFE_1257 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1275 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DFE_1945 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2925 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1304 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2005 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2448 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1348 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1383 sensory box protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1668 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1427 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3132 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1524 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3174 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1882 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D DFE_1894 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2831 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_3301 methyl-accepting chemotaxis sensory transducer, class 34H K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0055 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0195 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0231 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D DFE_0324 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DFE_2622 H+ transporting two-sector ATPase E subunit K02411 fliH; flagellar assembly protein FliH
D DFE_2623 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DFE_2898 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D DFE_2674 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D DFE_2673 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DFE_2672 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DFE_1244 flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D DFE_1246 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DFE_1245 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DFE_2621 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DFE_1971 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DFE_2675 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DFE_2620 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DFE_1184 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D DFE_1186 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DFE_1185 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D DFE_1251 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL
D DFE_2676 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D DFE_2619 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DFE_2175 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D DFE_2617 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DFE_2618 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DFE_0936 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DFE_2174 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DFE_1188 uncharacterized protein K02391 flgF; flagellar basal-body rod protein FlgF
D DFE_1187 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DFE_1183 peptidase M23 K02395 flgJ; peptidoglycan hydrolase FlgJ
D DFE_0937 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D DFE_2167 uncharacterized protein K02390 flgE; flagellar hook protein FlgE
D DFE_2173 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D DFE_0938 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DFE_1181 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DFE_0939 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DFE_1180 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DFE_0942 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0943 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2105 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2171 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0352 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_1910 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_2355 flagellin domain-containing protein K02406 fliC; flagellin
D DFE_0940 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D DFE_1911 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D DFE_1912 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D DFE_1249 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D DFE_1976 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D DFE_1378 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_0132 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2179 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D DFE_2679 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D DFE_1975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D DFE_1377 OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB
D DFE_0133 motB3; MotB3 protein K02557 motB; chemotaxis protein MotB
D DFE_2178 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2677 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_2678 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D DFE_1202 sigma-54 factor interaction domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D DFE_2068 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D DFE_1178 uncharacterized protein K13626 fliW; flagellar assembly factor FliW
D DFE_0086 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DFE_1177 putative anti-sigma-28 factor, FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D DFE_1247 putative Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D DFE_1248 flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D DFE_0861 flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D DFE_3331 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D DFE_1079 twitching motility protein K02669 pilT; twitching motility protein PilT
D DFE_1080 twitching motility protein K02669 pilT; twitching motility protein PilT
D DFE_1985 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D DFE_1795 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D DFE_1984 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DFE_1796 putative type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D DFE_3020 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DFE_1793 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D DFE_1392 flp/fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D DFE_1393 peptidase A24A, prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DFE_1394 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DFE_1395 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D DFE_1397 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D DFE_1398 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:dfl04812]
D DFE_1200 MEMO1 family protein DND132_0038 K06990 MEMO1; MEMO1 family protein
D DFE_2943 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DFE_0919 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DFE_1813 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DFE_1814 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DFE_0488 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D DFE_A0037 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D DFE_2657 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D DFE_2655 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dfl04147]
D DFE_2272 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D DFE_2145 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DFE_1043 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DFE_2193 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DFE_0923 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DFE_3329 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DFE_3110 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DFE_0435 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DFE_3323 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DFE_1634 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DFE_0389 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DFE_0370 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DFE_2770 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DFE_0559 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_0704 fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DFE_0354 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D DFE_2885 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DFE_0903 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DFE_0261 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DFE_0260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DFE_0797 amidinotransferase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D DFE_1073 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DFE_3220 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DFE_2512 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DFE_1010 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_2790 glnA_1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DFE_1923 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DFE_1118 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2862 pdxB_1; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DFE_2610 phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DFE_2739 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DFE_1602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DFE_1052 electron transfer flavoprotein alpha subunit-like protein K03522 fixB; electron transfer flavoprotein alpha subunit
D DFE_2915 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DFE_0924 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DFE_0364 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:dfl02048]
D DFE_0061 phage shock protein C, PspC K03973 pspC; phage shock protein C
D DFE_1813 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DFE_2943 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DFE_0919 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DFE_2212 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DFE_3229 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DFE_1713 DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB
D DFE_1712 phosphoadenosine phosphosulfate reductase K19170 dndC; DNA sulfur modification protein DndC
D DFE_1707 putative uncharacterized protein K19171 dndD; DNA sulfur modification protein DndD
D DFE_1711 ATPase involved in DNA repair K19171 dndD; DNA sulfur modification protein DndD
D DFE_1710 DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:dfl01504]
D DFE_0263 fosfomycin resistance family protein K21252 fosX; fosfomycin resistance protein FosX
D DFE_3051 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DFE_1556 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_2294 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DFE_1557 hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DFE_0382 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D DFE_3222 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:dfl00536]
D DFE_1771 filamentous hemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dfl03100]
D DFE_t0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0062 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DFE_t0054 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DFE_t0057 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DFE_t0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DFE_t0047 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DFE_t0060 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DFE_t0053 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DFE_t0029 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DFE_t0035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DFE_t0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DFE_t0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DFE_t0061 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DFE_t0018 tRNA-His K14226 tRNA-His; tRNA His
D DFE_t0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DFE_t0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DFE_t0007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DFE_t0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DFE_t0044 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DFE_t0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DFE_t0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DFE_t0040 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0015 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0039 tRNA-Met K14230 tRNA-Met; tRNA Met
D DFE_t0022 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DFE_t0056 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DFE_t0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DFE_t0037 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DFE_t0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DFE_t0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0011 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DFE_t0005 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DFE_t0051 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DFE_t0002 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DFE_t0006 tRNA-Val K14237 tRNA-Val; tRNA Val
D DFE_t0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D DFE_t0036 tRNA-Val K14237 tRNA-Val; tRNA Val
D DFE_t0058 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D DFE_r0001 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DFE_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DFE_r0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DFE_0105 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D DFE_0205 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D DFE_0204 indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D DFE_2478 Saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D DFE_1054 electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D DFE_0752 qor; nadph:quinone reductase, zeta-crystallin homolog protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DFE_0558 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D DFE_2805 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DFE_0812 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DFE_2205 ferredoxin thioredoxin reductase subunit beta K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]
D DFE_2781 redoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DFE_1090 cytochrome-c3 hydrogenase K00437 hydB; [NiFe] hydrogenase large subunit [EC:1.12.2.1]
D DFE_1091 hydrogenase (NiFe) small subunit HydA K18008 hydA; [NiFe] hydrogenase small subunit [EC:1.12.2.1]
D DFE_1213 hydrogenase, Fe-only K00533 E1.12.7.2L; ferredoxin hydrogenase large subunit [EC:1.12.7.2]
D DFE_1214 iron hydrogenase small subunit K00534 E1.12.7.2S; ferredoxin hydrogenase small subunit [EC:1.12.7.2]
D DFE_0542 Pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DFE_2921 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D DFE_1154 ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D DFE_0476 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DFE_3166 truncated arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DFE_1855 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DFE_0009 anaerobic ribonucleoside-triphosphate reductase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DFE_2791 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DFE_2000 uncharacterized protein K23300 qrcA; menaquinone reductase, multiheme cytochrome c subunit [EC:1.97.-.-]
D DFE_1085 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DFE_2566 uncharacterized protein K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D DFE_2551 N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D DFE_1857 GCN5-related N-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D DFE_0864 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DFE_0687 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D DFE_0780 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D DFE_2296 deoxyhypusine synthase-like protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D DFE_2069 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate AIR carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D DFE_2325 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DFE_0660 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DFE_0314 DegV family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D DFE_0274 uncharacterized protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D DFE_0876 putative carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D DFE_0717 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DFE_0103 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DFE_2082 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D DFE_0734 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DFE_0256 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D DFE_2458 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DFE_0668 response regulator receiver K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DFE_3175 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DFE_2076 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DFE_2646 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DFE_1777 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DFE_2306 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DFE_2901 uncharacterized protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D DFE_0884 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DFE_2711 uncharacterized protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D DFE_2084 UPF0272 protein Dbac_0709 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D DFE_1413 kamA; lysine 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D DFE_2246 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D DFE_0654 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D DFE_0653 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D DFE_1573 HAD superfamily P-type ATPase K12953 ctpF; cation-transporting P-type ATPase F [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D DFE_2727 sfsA; sugar fermentation stimulation protein homolog K06206 sfsA; sugar fermentation stimulation protein A
D DFE_0702 acetoin utilization protein K04767 acuB; acetoin utilization protein AcuB
D DFE_2085 CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB
D DFE_2634 uncharacterized protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D DFE_2635 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D DFE_2636 uncharacterized protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D DFE_3295 lactate utilization protein B/C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D DFE_0634 formate dehydrogenase subunit FdhD K02379 fdhD; FdhD protein
D DFE_0533 ferredoxin K05337 fer; ferredoxin
D DFE_0155 uncharacterized protein K05337 fer; ferredoxin
D DFE_0655 electron transport complex, RnfABCDGE type, Gsub unit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D DFE_0656 RnfABCDGE type electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D DFE_0657 RnfABCDGE type electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D DFE_3228 nifU; nitrogen fixation protein NifU K13819 K13819; NifU-like protein
D DFE_1482 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D DFE_1487 radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB
D DFE_1483 nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN
D DFE_1484 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D DFE_2057 heterodisulfide reductase subunit A K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D DFE_2058 quinone-interacting membrane-bound oxidoreductase K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D DFE_2059 qmoC; quinone-interacting membrane-bound oxidoreductase complex subunit C K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC
D DFE_2824 NADH/Ubiquinone/plastoquinone complex I K14086 echA; ech hydrogenase subunit A
D DFE_2825 respiratory-chain NADH dehydrogenase subunit 1 K14087 echB; ech hydrogenase subunit B
D DFE_2826 Ni,Fe-hydrogenase III small subunit K14088 echC; ech hydrogenase subunit C
D DFE_2827 hypothetical protein K14089 echD; ech hydrogenase subunit D
D DFE_2828 NADH dehydrogenase (quinone) K14090 echE; ech hydrogenase subunit E
D DFE_2829 4Fe-4S ferredoxin K14091 echF; ech hydrogenase subunit F
D DFE_1292 uncharacterized protein K14113 ehbD; energy-converting hydrogenase B subunit D
D DFE_1053 electron transfer flavoprotein subunit alpha/beta K03521 fixA; electron transfer flavoprotein beta subunit
D DFE_0248 TusE/DsrC/DsvC family sulfur relay protein K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DFE_2680 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DFE_0954 uncharacterized protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D DFE_0639 molybdopterin-guanine dinucleotide biosynthesis protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D DFE_2627 acsA; putative acetyltransferase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DFE_1491 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D DFE_1490 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
D DFE_3003 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D DFE_2007 tex; protein tex K06959 tex; protein Tex
D DFE_0428 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D DFE_1115 beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D DFE_0778 ATP-dependent Clp protease adapter protein clpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DFE_1163 tig; trigger factor K03545 tig; trigger factor
D DFE_0635 formate dehydrogenase accessory protein K02380 fdhE; FdhE protein
D DFE_1354 formate dehydrogenase accessory protein K02380 fdhE; FdhE protein
D DFE_2129 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D DFE_1088 hynD; HynD protein K04653 hypC; hydrogenase expression/formation protein HypC
D DFE_1264 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D DFE_1263 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D DFE_1662 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D DFE_2204 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D DFE_2443 Mg chelatase subunit ChlI K07391 comM; magnesium chelatase family protein
D DFE_2660 uncharacterized protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D DFE_2232 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DFE_1310 endonuclease III K07457 K07457; endonuclease III related protein
D DFE_2134 UPF0102 protein Desal_0201 K07460 yraN; putative endonuclease
D DFE_2416 excinuclease ABC subunit C K07461 K07461; putative endonuclease
D DFE_0495 DNA protecting protein DprA K04096 smf; DNA processing protein
D DFE_0913 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D DFE_1746 phage/plasmid primase, P4 family domain protein K06919 K06919; putative DNA primase/helicase
D DFE_0002 putative Transposase, ISXO2 K07488 K07488; transposase
D DFE_0630 uncharacterized protein K07488 K07488; transposase
D DFE_1769 uncharacterized protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D DFE_0059 phage shock protein A, PspA K03969 pspA; phage shock protein A
D DFE_1167 nucleoid-associated protein dsx2_0951 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DFE_1004 AAT family amino acid transporter K03293 TC.AAT; amino acid transporter, AAT family
D DFE_2395 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D DFE_3205 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D DFE_3162 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D DFE_2456 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D DFE_3260 Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D DFE_2685 cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D DFE_2391 CgeB family protein K06320 cgeB; spore maturation protein CgeB
D DFE_0910 CgeB family protein K06320 cgeB; spore maturation protein CgeB
D DFE_2177 CgeB family protein K06320 cgeB; spore maturation protein CgeB
D DFE_2359 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D DFE_1530 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D DFE_1311 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D DFE_0753 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D DFE_0672 GTP-binding protein TypA K06207 typA; GTP-binding protein
D DFE_1086 CBS domain containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D DFE_0255 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D DFE_3204 PhoH family protein K07175 phoH2; PhoH-like ATPase
D DFE_2989 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D DFE_3127 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D DFE_0970 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D DFE_0310 outer membrane chaperone Skp OmpH K06142 hlpA; outer membrane protein
D DFE_0330 outer membrane chaperone Skp OmpH K06142 hlpA; outer membrane protein
D DFE_0504 AsmA family protein K07289 asmA; AsmA protein
D DFE_2162 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D DFE_3135 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D DFE_1647 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D DFE_0893 transcriptional regulator, XRE family K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D DFE_3209 phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein
D DFE_1620 cutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D DFE_0822 uncharacterized protein K07216 hr; hemerythrin
D DFE_0680 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D DFE_2066 uncharacterized protein K07216 hr; hemerythrin
D DFE_0040 methyl-accepting chemotaxis protein K07216 hr; hemerythrin
D DFE_0258 methyl-accepting chemotaxis sensory transducer K07216 hr; hemerythrin
D DFE_2695 uncharacterized protein K07216 hr; hemerythrin
D DFE_2822 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D DFE_1335 methyl-accepting chemotaxis sensory transducer K07216 hr; hemerythrin
D DFE_2554 putative uncharacterized protein K07216 hr; hemerythrin
D DFE_2745 molybdenum cofactor synthesis domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DFE_0617 helix-turn-helix domain DNA-binding protein K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DFE_2992 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D DFE_0827 uncharacterized protein K06192 pqiB; paraquat-inducible protein B
D DFE_2736 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D DFE_1941 export-related chaperone CsaA K06878 K06878; tRNA-binding protein
D DFE_2798 patatin K07001 K07001; NTE family protein
D DFE_1553 haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D DFE_1590 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D DFE_1554 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D DFE_3337 ribonuclease BN K07058 K07058; membrane protein
D DFE_1955 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D DFE_1938 uncharacterized protein K03744 lemA; LemA protein
D DFE_2238 uncharacterized protein K03745 slyX; SlyX protein
D DFE_0572 putative Sporulation domain-containing protein K03749 dedD; DedD protein
D DFE_0828 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D DFE_0829 uncharacterized protein K03808 pqiA; paraquat-inducible protein A
D DFE_1084 uncharacterized protein K08974 K08974; putative membrane protein
D DFE_2245 membrane protein K08984 yjdF; putative membrane protein
D DFE_2425 SEC-C motif domain-containing protein K09858 K09858; SEC-C motif domain protein
D DFE_0564 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D DFE_2168 DRTGG domain-containing protein K06873 K06873; uncharacterized protein
D DFE_0526 uncharacterized protein K06888 K06888; uncharacterized protein
D DFE_1098 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D DFE_2259 membrane protein K06890 K06890; uncharacterized protein
D DFE_1725 phage-related baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D DFE_1714 late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D DFE_1716 P2 GpU family protein K06906 gpU; phage tail protein
D DFE_1720 tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D DFE_1719 uncharacterized protein K06908 FII; Bacteriophage tail tube protein
D DFE_1582 CoA-binding protein K06929 K06929; uncharacterized protein
D DFE_1850 uncharacterized protein K06934 K06934; uncharacterized protein
D DFE_1583 uncharacterized protein K06940 K06940; uncharacterized protein
D DFE_0165 uncharacterized protein K06940 K06940; uncharacterized protein
D DFE_2139 RNA-binding protein K06960 K06960; uncharacterized protein
D DFE_2516 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D DFE_3149 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D DFE_0562 cyclic nucleotide-binding protein K07003 K07003; uncharacterized protein
D DFE_3055 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07005 K07005; uncharacterized protein
D DFE_2418 uncharacterized protein K07019 K07019; uncharacterized protein
D DFE_2948 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein
D DFE_0099 amidohydrolase 2 K07045 K07045; uncharacterized protein
D DFE_0580 putative uncharacterized protein K07071 K07071; uncharacterized protein
D DFE_0471 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D DFE_1415 TRAP-type transporter, periplasmic solute binding receptor TAXI family protein K07080 K07080; uncharacterized protein
D DFE_0308 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D DFE_3159 permease K07089 K07089; uncharacterized protein
D DFE_2253 membrane protein DUF318 K07089 K07089; uncharacterized protein
D DFE_0945 uncharacterized protein K07090 K07090; uncharacterized protein
D DFE_0151 conserved membrane protein of unknown function K07090 K07090; uncharacterized protein
D DFE_0280 uncharacterized protein K07090 K07090; uncharacterized protein
D DFE_2347 conserved membrane protein of unknown function K07090 K07090; uncharacterized protein
D DFE_3322 hypothetical protein K07090 K07090; uncharacterized protein
D DFE_2111 hypothetical protein K07090 K07090; uncharacterized protein
D DFE_2106 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D DFE_0586 phosphoesterase, Icc protein-like protein K07096 K07096; uncharacterized protein
D DFE_0928 metallophosphoesterase K07098 K07098; uncharacterized protein
D DFE_2420 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D DFE_2421 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D DFE_1752 YeeE/YedE K07112 K07112; uncharacterized protein
D DFE_0818 putative uncharacterized protein K07117 K07117; uncharacterized protein
D DFE_2550 sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D DFE_1885 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D DFE_2944 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D DFE_1051 uncharacterized protein K07150 K07150; uncharacterized protein
D DFE_2802 uncharacterized protein K07150 K07150; uncharacterized protein
D DFE_1108 zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein
D DFE_2357 protein YidD K08998 K08998; uncharacterized protein
D DFE_1615 uncharacterized protein K08999 K08999; uncharacterized protein
D DFE_1060 GatB/YqeY family protein K09117 K09117; uncharacterized protein
D DFE_2740 uncharacterized protein K09122 K09122; uncharacterized protein
D DFE_0081 transmembrane protein K09129 K09129; uncharacterized protein
D DFE_0747 UPF0235 protein Dvul_1694 K09131 K09131; uncharacterized protein
D DFE_0676 putative uncharacterized protein K09133 K09133; uncharacterized protein
D DFE_0775 uncharacterized protein K09137 K09137; uncharacterized protein
D DFE_0251 uncharacterized protein K09138 K09138; uncharacterized protein
D DFE_3083 AMMECR1 domain protein K09141 K09141; uncharacterized protein
D DFE_0513 uncharacterized protein K09155 K09155; uncharacterized protein
D DFE_2648 conserved membrane protein of unknown function K09729 K09729; uncharacterized protein
D DFE_0241 ApbE family lipoprotein K09740 K09740; uncharacterized protein
D DFE_0662 uncharacterized protein K09749 K09749; uncharacterized protein
D DFE_2180 uncharacterized protein K09749 K09749; uncharacterized protein
D DFE_2284 uncharacterized protein K09749 K09749; uncharacterized protein
D DFE_2017 uncharacterized protein K09763 K09763; uncharacterized protein
D DFE_1193 hypothetical protein K09764 K09764; uncharacterized protein
D DFE_0993 yaiI; UPF0178 protein DESAM_21853 K09768 K09768; uncharacterized protein
D DFE_2081 hypothetical protein K09791 K09791; uncharacterized protein
D DFE_1221 uncharacterized protein K09793 K09793; uncharacterized protein
D DFE_1313 uncharacterized protein K09798 K09798; uncharacterized protein
D DFE_0826 uncharacterized protein K09857 K09857; uncharacterized protein
D DFE_1067 uncharacterized protein K09928 K09928; uncharacterized protein
D DFE_3056 uncharacterized protein K09931 K09931; uncharacterized protein
D DFE_2961 uncharacterized protein K09937 K09937; uncharacterized protein
D DFE_1511 uncharacterized protein K09978 K09978; uncharacterized protein
D DFE_3094 uncharacterized protein K01163 K01163; uncharacterized protein
D DFE_1559 uncharacterized protein K07502 yprB; uncharacterized protein
D DFE_3206 phosphate transport regulator K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024