+D GENES KO #

  KEGG Orthology (KO) - Dehalogenimonas formicexedens

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dfo00010] D Dform_00356 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01095 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_00227 pgi-pmi; glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dform_01193 fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dform_00838 tpiA; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dform_00972 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dform_01359 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Dform_00837 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dform_00032 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dform_00969 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dform_00536 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dform_01081 pps|ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dform_00621 korA|oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dform_00622 korB|oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dform_00618 acetyltransferase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] C 00020 Citrate cycle (TCA cycle) [PATH:dfo00020] D Dform_00040 nifV; homocitrate synthase NifV K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Dform_01257 isocitrate dehydrogenase (NAD+) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Dform_00621 korA|oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dform_00622 korB|oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dform_01253 fumA; fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dform_01252 fumB; fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dform_00452 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Dform_01260 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:dfo00030] D Dform_00227 pgi-pmi; glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dform_00355 gnd|gntZ; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Dform_00359 gnd|gntZ; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Dform_00794 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dform_00796 tktA|tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dform_02098 talA|talB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Dform_00724 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dform_00795 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dform_01544 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Dform_00354 Threonine dehydrogenase K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D Dform_00402 gluconate 2-dehydrogenase alpha chain K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D Dform_00401 gluconate 2-dehydrogenase gamma chain K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D Dform_01193 fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:dfo00040] D Dform_01655 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Dform_00505 galU|galF; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dform_00794 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dform_00570 gutB; L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Dform_00021 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:dfo00051] D Dform_00227 pgi-pmi; glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dform_01191 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Dform_00021 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Dform_01049 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dform_00570 gutB; L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Dform_01193 fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dform_00838 tpiA; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dform_00724 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dform_00795 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:dfo00052] D Dform_01832 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Dform_00505 galU|galF; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dform_00356 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01095 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dform_01303 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:dfo00500] D Dform_00505 galU|galF; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dform_01431 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Dform_01432 glgA; starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Dform_01096 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Dform_01115 glgP; starch phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Dform_00363 glucoamylase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Dform_01116 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Dform_00356 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01095 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_00227 pgi-pmi; glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dfo00520] D Dform_00934 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dform_01817 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dform_01181 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Dform_01815 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Dform_01834 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dform_01180 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dform_01826 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D Dform_00356 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01095 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_00505 galU|galF; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dform_01832 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Dform_00227 pgi-pmi; glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dform_01191 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Dform_01431 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:dfo00620] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dform_00621 korA|oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dform_00622 korB|oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dform_00536 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dform_01848 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Dform_00618 acetyltransferase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Dform_00991 Glyoxylase, beta-lactamase superfamily II K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Dform_00452 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Dform_01260 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dform_01253 fumA; fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dform_01252 fumB; fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dform_01081 pps|ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_00729 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Dform_00734 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dfo00630] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_01048 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01155 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01543 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dform_00384 Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D Dform_00419 fdoG|fdfH; formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dform_00420 formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dform_01917 putative dimethyl sulfoxide reductase iron-sulfur subunit B K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dform_00360 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D Dform_01854 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:dfo00640] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dform_00618 acetyltransferase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dform_01619 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:dfo00650] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_01553 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dform_01552 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dform_00621 korA|oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dform_00622 korB|oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dform_00726 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dform_00727 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:dfo00660] D Dform_00726 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dform_00727 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dform_00731 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dform_01259 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dform_00732 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dform_01258 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dform_00733 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dfo00562] D Dform_01207 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Dform_00838 tpiA; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dfo00190] D Dform_00753 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Dform_00752 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Dform_00751 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Dform_00750 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Dform_00782 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Dform_01145 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Dform_00783 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Dform_01146 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Dform_00749 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Dform_00745 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Dform_00744 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Dform_00743 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Dform_00746 nuoK; NADH-quinone oxidoreductase subunit K/NAD(P)H-quinone oxidoreductase subunit 4L K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2] D Dform_00748 ndhI; NAD(P)H-quinone oxidoreductase subunit I K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2] D Dform_00784 nuoG; 4Fe-4S dicluster domain-containing protein K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Dform_01089 ccoNO; cytochrome c oxidase cbb3-type subunit I/II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9] D Dform_00875 atpA; F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Dform_00873 atpD; F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Dform_00874 F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Dform_00876 F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Dform_00872 F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Dform_00879 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dform_00907 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dform_00877 F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Dform_00878 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Dform_00106 H+-transporting ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D Dform_00678 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:dfo00710] D Dform_00972 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dform_01359 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Dform_00796 tktA|tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dform_00724 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dform_00795 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dform_00838 tpiA; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dform_00794 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dform_02098 talA|talB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:dfo00720] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dform_01081 pps|ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dform_00452 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Dform_01260 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dform_01253 fumA; fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dform_01252 fumB; fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_00621 korA|oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dform_00622 korB|oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dform_02183 NADPH-dependent glutamate synthase beta chain or related oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D Dform_00881 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dform_00909 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dform_00884 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dform_00912 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dform_01063 carbon-monoxide dehydrogenase iron sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dform_00887 acsB; acetyl-CoA synthase K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169] D Dform_00914 acsB; acetyl-CoA synthase K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169] D Dform_00888 cdhE|acsC; acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dform_00915 cdhE|acsC; acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dform_00913 cdhD|acsD; acetyl-CoA decarbonylase/synthase complex subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:dfo00680] D Dform_00419 fdoG|fdfH; formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dform_00420 formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dform_01917 putative dimethyl sulfoxide reductase iron-sulfur subunit B K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dform_02183 NADPH-dependent glutamate synthase beta chain or related oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D Dform_00888 cdhE|acsC; acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dform_00915 cdhE|acsC; acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dform_00913 cdhD|acsD; acetyl-CoA decarbonylase/synthase complex subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D Dform_01063 carbon-monoxide dehydrogenase iron sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dform_01543 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dform_00969 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dform_01193 fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dform_00936 coenzyme F420 hydrogenase subunit delta K00442 frhD; coenzyme F420 hydrogenase subunit delta D Dform_00941 hdrA; heterodisulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dform_00893 hdrA; heterodisulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dform_00920 hdrA; heterodisulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dform_00942 hdrB; heterodisulfide reductase subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dform_00943 hdrC; heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dform_00940 mvhD|vhcD; F420-non-reducing hydrogenase iron-sulfur subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Dform_00937 mvhA|vhcA; F420-non-reducing hydrogenase large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D Dform_00938 mvhG|vhcG; F420-non-reducing hydrogenase small subunit K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dform_01081 pps|ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dform_00837 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dform_00032 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dform_00958 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00910 Nitrogen metabolism [PATH:dfo00910] D Dform_01441 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Dform_01200 ncd2|npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Dform_01048 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01155 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_00083 gltD; glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:dfo00920] D Dform_02023 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Dform_01439 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Dform_00097 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Dform_00477 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dfo00061] D Dform_01344 acyl carrier protein K02078 acpP; acyl carrier protein D Dform_01341 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dform_00766 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dform_01342 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dform_01027 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_01030 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dfo00071] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_01027 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_01030 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dfo00561] D Dform_00384 Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D Dform_00694 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Dform_00333 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_00768 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_02194 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01575 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01584 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_00022 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01849 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Dform_01519 lipid kinase, YegS/Rv2252/BmrU family K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Dform_01093 Lysophospholipase, alpha-beta hydrolase superfamily K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] C 00564 Glycerophospholipid metabolism [PATH:dfo00564] D Dform_01576 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Dform_00333 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_00768 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_02194 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01575 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01584 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_00022 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01849 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Dform_01519 lipid kinase, YegS/Rv2252/BmrU family K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Dform_01676 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dfo00230] D Dform_01247 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Dform_01544 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Dform_01336 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dform_00720 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Dform_00760 purN; Folate-dependent phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Dform_01283 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dform_01282 phosphoribosylformylglycinamidine synthase subunit II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D Dform_02104 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Dform_00719 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Dform_00717 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Dform_00718 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dform_02105 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dform_01002 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dform_00998 hprT|hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Dform_01648 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Dform_01285 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Dform_01887 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dform_01192 rdgB; XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Dform_00722 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Dform_00080 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Dform_01664 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01456 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00328 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00348 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01986 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00609 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_02040 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01606 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01082 dgt; dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D Dform_02028 dgt; dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D Dform_00057 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Dform_01204 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Dform_00997 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Dform_02196 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Dform_00213 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dform_00030 tetrapyrrole methylase family protein / MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dform_01525 ATP adenylyltransferase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] C 00240 Pyrimidine metabolism [PATH:dfo00240] D Dform_01423 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dform_01422 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dform_01420 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Dform_01421 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Dform_00160 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Dform_01424 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Dform_01414 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Dform_02207 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Dform_01274 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Dform_01887 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dform_00030 tetrapyrrole methylase family protein / MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dform_02099 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Dform_01002 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dform_01419 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Dform_02196 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Dform_00585 dcd; DCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Dform_01664 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01456 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00328 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00348 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01986 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00609 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_02040 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01606 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_02051 comEB; DCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Dform_00985 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Dform_01514 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Dform_00738 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Dform_00406 thyX|thy1; thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dfo00250] D Dform_01875 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Dform_01427 ornithine cyclodeaminase/alanine dehydrogenase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] D Dform_00595 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dform_00594 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dform_01204 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Dform_00718 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dform_01420 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Dform_00083 gltD; glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dform_01048 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01155 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01423 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dform_01422 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dform_01283 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dform_00934 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dform_01817 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dform_01336 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dfo00260] D Dform_00035 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dform_01187 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dform_01079 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dform_01078 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Dform_00115 ltaE; L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Dform_01543 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dform_00837 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dform_00032 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dform_00384 Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D Dform_00958 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dform_01595 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dform_00432 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Dform_00433 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dform_01031 trpB; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dfo00270] D Dform_01439 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Dform_00097 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Dform_01518 patB|malY; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dform_00229 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Dform_00234 mtaP; 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Dform_00235 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Dform_00823 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D Dform_00230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dform_00035 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dform_01187 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dform_01079 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dform_00758 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D Dform_00757 4Fe-4S dicluster domain-containing protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D Dform_00477 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Dform_00478 metY; O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Dform_00023 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dform_01595 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dform_01254 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dform_00958 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:dfo00280] D Dform_00023 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dfo00290] D Dform_00731 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dform_01259 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dform_00732 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dform_01258 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dform_00733 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Dform_00726 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dform_00727 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dform_00728 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Dform_00725 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dform_00023 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dform_00729 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Dform_00734 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dfo00300] D Dform_01079 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dform_00035 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dform_01187 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dform_01188 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Dform_01186 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Dform_00597 acetylornithine/N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Dform_01379 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Dform_00840 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Dform_00841 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dform_00683 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00310 Lysine degradation [PATH:dfo00310] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_01595 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dform_01067 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:dfo00220] D Dform_01573 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Dform_00595 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dform_00594 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dform_01283 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dform_01048 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01155 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01423 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dform_01422 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dform_01246 argA; amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Dform_00599 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Dform_01666 Ribosomal protein S18 acetylase RimI K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D Dform_00598 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Dform_00175 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Dform_00597 acetylornithine/N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:dfo00330] D Dform_01074 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Dform_01629 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Dform_01346 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Dform_00568 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:dfo00340] D Dform_00712 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Dform_01508 hisIE; phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Dform_01507 hisA; 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Dform_01062 hisH; glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Dform_01059 hisF; cyclase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Dform_00715 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Dform_00899 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00926 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00714 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00713 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism D Dform_00899 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00926 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00714 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:dfo00360] D Dform_01553 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dform_00899 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00926 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00714 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:dfo00380] D Dform_00360 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dfo00400] D Dform_00185 aroF1; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dform_00628 aroF1; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dform_00137 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Dform_00184 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Dform_00183 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Dform_00182 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Dform_00181 aroK|aroL; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Dform_00180 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Dform_00179 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Dform_00438 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dform_00437 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Dform_00436 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Dform_00434 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Dform_00435 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Dform_00432 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Dform_00433 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dform_01031 trpB; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dform_00178 pheA1; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Dform_00177 tyrA2; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Dform_01488 pheA2; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Dform_00899 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00926 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00714 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dfo00410] D Dform_01004 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Dform_01006 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D Dform_01427 ornithine cyclodeaminase/alanine dehydrogenase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:dfo00450] D Dform_01518 patB|malY; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dform_00693 trxB; thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Dform_02178 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Dform_02179 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Dform_01903 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D Dform_01543 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dfo00470] D Dform_01068 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dform_01069 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dform_01595 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dform_01283 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dform_00840 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Dform_00683 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:dfo00480] D Dform_02141 Gamma-glutamyl cyclotransferase, AIG2-like K00682 GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9] D Dform_01028 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Dform_00355 gnd|gntZ; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Dform_00359 gnd|gntZ; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:dfo00515] D Dform_01291 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Dform_01583 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:dfo00514] D Dform_01291 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Dform_01583 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dfo00541] D Dform_00505 galU|galF; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dform_01832 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Dform_01816 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Dform_01834 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dform_01180 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dform_01826 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:dfo00550] D Dform_01068 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dform_01069 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dform_01805 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dform_01677 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dfo00543] D Dform_01439 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dfo00730] D Dform_00982 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Dform_00101 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00123 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_01982 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00835 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Dform_00538 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Dform_00989 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Dform_01890 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Dform_01880 rsgA|engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Dform_00213 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dfo00740] D Dform_01241 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dform_02005 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dform_01243 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Dform_01517 arfC; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D Dform_01240 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Dform_01242 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Dform_00955 ribF; riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Dform_01247 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:dfo00750] D Dform_01078 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Dform_01281 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Dform_00959 pdxT|pdx2; 5'-phosphate synthase pdxT subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:dfo00760] D Dform_01875 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Dform_01437 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Dform_01874 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Dform_02106 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Dform_01002 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dform_02210 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Dform_00030 tetrapyrrole methylase family protein / MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dform_01046 nadE; NAD+ synthase (glutamine-hydrolysing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Dform_00566 pncC; nicotinamide-nucleotide amidase/nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Dform_01245 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:dfo00770] D Dform_00726 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dform_00727 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dform_00728 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Dform_00725 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dform_01005 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Dform_01006 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Dform_01564 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Dform_01567 coaBC|dfp; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Dform_00030 tetrapyrrole methylase family protein / MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dform_00469 coaD|kdtB; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Dform_01269 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Dform_01148 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Dform_00023 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dform_01004 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:dfo00780] D Dform_00766 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dform_01342 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dform_00705 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:dfo00790] D Dform_01076 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Dform_02189 dihydropteroate synthase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Dform_00045 folC; dihydrofolate synthase / folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Dform_01241 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dform_02005 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dform_02190 queD|ptpS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Dform_00415 moaA; cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dform_00414 moaC; cyclic pyranopterin phosphate synthase K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Dform_00416 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Dform_00417 moeA; molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Dform_00418 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dfo00670] D Dform_00881 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dform_00909 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dform_00884 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dform_00912 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dform_01543 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dform_00760 purN; Folate-dependent phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Dform_02105 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dform_02214 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Dform_00738 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Dform_00406 thyX|thy1; thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Dform_01854 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dfo00860] D Dform_00154 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dform_01787 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Dform_01783 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Dform_01784 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Dform_01786 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Dform_00707 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Dform_01785 cobA-hemD; uroporphyrinogen III methyltransferase / synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Dform_01788 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Dform_01789 DNA-binding transcriptional regulator, Lrp family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Dform_01790 radical SAM additional 4Fe4S-binding SPASM domain-containing protein K22226 ahbC; Fe-coproporphyrin III synthase D Dform_01373 heme b synthase K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Dform_01780 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Dform_01778 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D Dform_01779 cobM|cbiF; precorrin-4/cobalt-precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Dform_01782 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Dform_01781 cobL; precorrin-6B C(5,15)-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Dform_01990 cbiE; cobalt-precorrin-7 (C(5))-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Dform_01795 precorrin-8X/cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Dform_01102 cobB-cbiA; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Dform_01194 cobA|btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dform_01978 cobA|btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dform_01985 cobA|btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dform_00674 cobA|btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dform_01017 cobQ|cbiP; adenosylcobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Dform_00900 cbiB|cobD; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Dform_00927 cbiB|cobD; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Dform_01984 cbiB|cobD; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Dform_01406 Adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D Dform_00895 cobP|cobU; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Dform_00922 cobP|cobU; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Dform_00897 cobS|cobV; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Dform_00924 cobS|cobV; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Dform_00443 cobS|cobV; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Dform_00449 ThiC-like protein 1 K22465 bzaA_B; 5-hydroxybenzimidazole synthase [EC:4.1.99.23] D Dform_00448 thiC; phosphomethylpyrimidine synthase K22465 bzaA_B; 5-hydroxybenzimidazole synthase [EC:4.1.99.23] D Dform_00445 putative metal-binding protein K25497 bzaC; 5-hydroxybenzimidazole methyltransferase [EC:2.1.1.-] D Dform_00446 putative variant cofactor biosynthesis B12-binding domain/radical SAM domain protein 1 K25498 bzaD; 5-methoxybenzimidazole methyltransferase D Dform_00447 Radical SAM superfamily enzyme YgiQ, UPF0313 family K25499 bzaE; 5-methoxy-6-methylbenzimidazole methyltransferase D Dform_00898 cobU|cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Dform_00925 cobU|cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Dform_00444 cobU|cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Dform_00896 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Dform_00923 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Dform_00187 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dfo00130] D Dform_00135 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Dform_00136 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Dform_00138 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Dform_01851 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dfo00900] D Dform_00835 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Dform_00147 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Dform_00117 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Dform_00127 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Dform_00118 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Dform_00149 gcpE|ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Dform_01850 ispH|lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_01805 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dform_01677 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Dform_00796 tktA|tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Dform_01816 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:dfo00332] D Dform_01346 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Dform_00568 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dfo00261] D Dform_00035 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dform_01187 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dform_01188 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Dform_01186 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dfo00521] D Dform_00356 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01095 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01207 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Dform_01816 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Dform_00356 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Dform_01095 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Dform_01816 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis [PATH:dfo00401] D Dform_00177 tyrA2; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Dform_00899 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00926 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00714 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Dform_00438 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dform_00437 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Dform_01341 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dform_01342 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Dform_01344 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:dfo00999] D Dform_00229 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Dform_00182 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:dfo00362] D Dform_00948 praC|xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dform_01553 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Dform_01848 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Dform_00948 praC|xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:dfo00633] D Dform_01918 hyaA|hybO; hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dform_01923 hyaA|hybO; hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dform_01063 carbon-monoxide dehydrogenase iron sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dform_00780 porA; pyruvate ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dform_00781 porB; pyruvate ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dform_00778 porG; pyruvate ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dform_00779 porD; pyruvate ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D Dform_00948 praC|xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dfo03020] D Dform_00954 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dform_00953 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dform_00220 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dfo03010] D Dform_01272 small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Dform_00198 small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Dform_00219 small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Dform_00209 small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Dform_01039 small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Dform_00189 small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Dform_00206 small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Dform_00224 small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Dform_00191 small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Dform_00218 small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Dform_00188 small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Dform_00217 small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Dform_00205 small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Dform_01184 small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Dform_00870 small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Dform_00201 small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Dform_01037 small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Dform_00196 small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Dform_02208 small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Dform_00627 small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Dform_01218 large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Dform_00195 large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Dform_00192 large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Dform_00193 large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Dform_00204 large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Dform_00207 large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Dform_01216 large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Dform_00692 large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Dform_01217 large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Dform_01219 large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Dform_00223 large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Dform_00202 large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Dform_00211 large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Dform_00199 large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Dform_00221 large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Dform_00208 large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Dform_02084 large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Dform_00833 large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Dform_01512 large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Dform_00197 large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Dform_00194 large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Dform_00203 large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Dform_02127 large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Dform_01511 large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Dform_00593 large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Dform_00200 large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Dform_00210 large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Dform_01510 large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Dform_01340 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Dform_01222 large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Dform_00832 large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Dform_00216 large subunit ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Dform_00087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dfo00970] D Dform_01434 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dform_00471 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dform_01940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dform_00834 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_00777 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_01896 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_02038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_01323 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_01007 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dform_01040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dform_02133 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Dform_01008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dform_01844 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dform_01679 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dform_01705 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dform_01179 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dform_02134 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dform_01016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dform_01324 tRNA-His K14226 tRNA-His; tRNA His D Dform_00257 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dform_00260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dform_02129 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_00826 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_01009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_02037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_02135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_00739 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dform_01100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dform_00863 tRNA-Met K14230 tRNA-Met; tRNA Met D Dform_01144 tRNA-Met K14230 tRNA-Met; tRNA Met D Dform_01548 tRNA-Met K14230 tRNA-Met; tRNA Met D Dform_01010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dform_00785 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dform_00031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dform_00821 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dform_00867 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_00774 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_01882 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_00773 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_01899 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dform_01226 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dform_01224 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dform_02136 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Dform_01225 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dform_00383 tRNA-Val K14237 tRNA-Val; tRNA Val D Dform_01237 tRNA-Val K14237 tRNA-Val; tRNA Val D Dform_02041 tRNA-Val K14237 tRNA-Val; tRNA Val D Dform_02176 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Dform_00154 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dform_00389 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Dform_02079 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dform_00388 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dform_00068 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dform_00799 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dform_00993 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dform_00865 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dform_00630 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dform_02179 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Dform_00119 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dform_01903 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dform_02214 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Dform_01165 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dform_01628 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dform_01032 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dform_00631 lysS; lysyl-tRNA synthetase, class 2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dform_00588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dform_01596 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dform_00711 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dform_00025 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dform_01633 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dform_01632 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dform_00956 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dform_01853 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dfo03060] D Dform_00212 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Dform_01221 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Dform_02080 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Dform_02087 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Dform_02088 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D Dform_01876 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Dform_01034 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dform_01505 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dform_02036 arsA; arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dform_01756 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_01757 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_00656 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02186 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02187 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02188 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02185 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D Dform_01413 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dform_00169 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dfo04122] D Dform_00101 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00123 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_01982 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00986 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Dform_00415 moaA; cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dform_00414 moaC; cyclic pyranopterin phosphate synthase K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Dform_00416 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:dfo03018] D Dform_00969 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dform_01185 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dform_01495 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Dform_02096 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Dform_02197 rny; ribonucrease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D Dform_01534 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dform_00173 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Dform_02121 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dform_02086 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dfo03030] D Dform_02161 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dform_00639 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dform_00684 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dform_00071 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dform_00533 dnaN; DNA polymerase-3 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01749 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01774 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_02013 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00304 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01140 AAA domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dform_00691 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dform_01083 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Dform_01038 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Dform_01641 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Dform_00987 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Dform_01592 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dform_00962 ligA|ligB; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dfo03410] D Dform_00741 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Dform_01594 mutM|fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dform_00556 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Dform_01535 dpo; DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Dform_01906 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dform_01592 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dform_00767 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dform_00962 ligA|ligB; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dfo03420] D Dform_01347 mfd; transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Dform_01094 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Dform_02075 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Dform_00584 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Dform_01719 uvrD|pcrA; DNA helicase-2 / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dform_01418 uvrD|pcrA; DNA helicase-2 / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dform_01592 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dform_00962 ligA|ligB; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:dfo03430] D Dform_00537 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Dform_01041 DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D Dform_01417 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Dform_01719 uvrD|pcrA; DNA helicase-2 / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dform_01418 uvrD|pcrA; DNA helicase-2 / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dform_00767 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dform_01038 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Dform_02161 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dform_00533 dnaN; DNA polymerase-3 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01749 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01774 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_02013 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00304 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00639 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dform_00071 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dform_00684 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dform_00962 ligA|ligB; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:dfo03440] D Dform_00767 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dform_01038 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Dform_00633 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Dform_00637 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Dform_02199 recombination protein RecA K03553 recA; recombination protein RecA D Dform_01592 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dform_01170 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Dform_01715 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_00269 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_00951 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_01950 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_01152 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Dform_00590 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dform_02161 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dform_00533 dnaN; DNA polymerase-3 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01749 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01774 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_02013 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00304 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00639 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dform_00071 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dform_00684 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dform_02085 priA; replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:dfo03450] D Dform_00677 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku D Dform_01625 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Dform_00676 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dfo02010] D Dform_01329 tungstate transport system substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Dform_01330 tungstate transport system permease protein K05773 tupB; tungstate transport system permease protein D Dform_01331 tungstate transport system ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Dform_01403 osmoprotectant transport system substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D Dform_01400 osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Dform_01402 osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Dform_01401 osmoprotectant transport system ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Dform_01914 basic membrane protein A K07335 bmpA; basic membrane protein A and related proteins D Dform_01618 phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dform_01617 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D Dform_01616 phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein D Dform_01615 phosphate transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Dform_02175 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dform_01024 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dform_01026 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein D Dform_02171 branched-chain amino acid transport system permease K01997 livH; branched-chain amino acid transport system permease protein D Dform_01025 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D Dform_02172 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D Dform_01021 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dform_02173 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dform_02174 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dform_01023 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dform_01123 oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01235 extracellular solute-binding protein, family 5 Middle K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01234 oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein D Dform_01233 oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein D Dform_01232 peptide/oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Dform_01231 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Dform_00004 cobalt/nickel transport system permease protein/cobalt/nickel transport protein K02009 cbiN; cobalt/nickel transport protein D Dform_01794 cbiM; cobalt/nickel transport system permease protein K02007 cbiM; cobalt/nickel transport system permease protein D Dform_00005 cobalt/nickel transport system permease protein K02007 cbiM; cobalt/nickel transport system permease protein D Dform_01792 cobalt/nickel transport system permease protein K02008 cbiQ; cobalt/nickel transport system permease protein D Dform_00003 cobalt/nickel transport system permease protein K02008 cbiQ; cobalt/nickel transport system permease protein D Dform_01791 cobalt/nickel transport system ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dform_00002 cobalt/nickel transport system ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dform_01238 biotin transport system substrate-specific component K03523 bioY; biotin transport system substrate-specific component D Dform_01635 lipooligosaccharide transport system permease protein K09694 nodJ; lipooligosaccharide transport system permease protein D Dform_01634 lipooligosaccharide transport system ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:dfo03070] D Dform_01300 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Dform_02087 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Dform_02088 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D Dform_01221 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Dform_02080 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Dform_00212 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Dform_01876 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Dform_01034 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dform_01505 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dform_01756 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_01757 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_00656 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02186 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02187 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02188 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02185 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:dfo02020] D Dform_01620 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dform_01056 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dform_01618 phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dform_01529 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D Dform_01201 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00338 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00614 two-component system, OmpR family, response regulator VicR K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01933 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01934 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01073 two-component system, OmpR family, KDP operon response regulator KdpE K07668 vicR; two-component system, OmpR family, response regulator VicR D Dform_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D Dform_00973 Signal transduction histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3] D Dform_01928 Response regulator receiver domain-containing protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Dform_00891 Signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dform_00918 Signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dform_01301 DNA-binding response regulator, NarL/FixJ family K07692 degU; two-component system, NarL family, response regulator DegU D Dform_01912 two-component system, NarL family, response regulator LiaR K11618 liaR; two-component system, NarL family, response regulator LiaR D Dform_00709 two-component system, NarL family, response regulator LiaR K11618 liaR; two-component system, NarL family, response regulator LiaR D Dform_01167 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR D Dform_01052 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Dform_01054 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Dform_01048 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01155 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_01290 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01288 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01289 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01918 hyaA|hybO; hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dform_01923 hyaA|hybO; hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dform_01672 Signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D Dform_02002 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_00503 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01113 CRP/FNR family transcriptional regulator, anaerobic regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01467 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01089 ccoNO; cytochrome c oxidase cbb3-type subunit I/II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dfo02024] D Dform_00438 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dform_00437 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Dform_01201 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00338 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00614 two-component system, OmpR family, response regulator VicR K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01933 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01934 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00572 putative autoinducer-2 (AI-2) aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D Dform_02175 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dform_01024 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dform_01026 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein D Dform_02171 branched-chain amino acid transport system permease K01997 livH; branched-chain amino acid transport system permease protein D Dform_01025 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D Dform_02172 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D Dform_01021 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dform_02173 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dform_02174 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dform_01023 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dform_01027 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_01030 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_02002 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_00503 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01113 CRP/FNR family transcriptional regulator, anaerobic regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01467 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01243 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Dform_01123 oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01235 extracellular solute-binding protein, family 5 Middle K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01234 oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein D Dform_01233 oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein D Dform_01232 peptide/oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Dform_01231 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Dform_01303 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D Dform_01034 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dform_01221 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Dform_02080 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Dform_00212 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Dform_01876 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Dform_01505 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dform_01301 DNA-binding response regulator, NarL/FixJ family K07692 degU; two-component system, NarL family, response regulator DegU C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D Dform_01084 RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor D Dform_00307 RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Dform_00969 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance D Dform_01123 oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01235 extracellular solute-binding protein, family 5 Middle K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01234 oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein D Dform_01233 oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein D Dform_01232 peptide/oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Dform_01231 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein C 01502 Vancomycin resistance [PATH:dfo01502] D Dform_01068 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dform_01069 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] C 01503 Cationic antimicrobial peptide (CAMP) resistance D Dform_01529 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dfo01000] C 01001 Protein kinases [BR:dfo01001] D Dform_01620 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dform_00973 Signal transduction histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3] D Dform_01202 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Dform_00891 Signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dform_00918 Signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dform_01672 Signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:dfo01009] D Dform_00230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:dfo01002] D Dform_00169 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D Dform_01287 leader peptidase (prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dform_01099 hyaD|hybD; hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Dform_00573 hyaD|hybD; hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Dform_00722 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Dform_01336 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dform_00934 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dform_01817 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dform_01270 hypothetical protein K07052 K07052; CAAX protease family protein D Dform_01028 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Dform_01379 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Dform_00214 map; methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Dform_00762 pepP; xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Dform_01675 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D Dform_00557 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D Dform_00335 ftsH|hflB; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dform_01905 ftsH|hflB; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dform_01494 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Dform_00148 rseP; regulator of sigma E protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Dform_01177 amzA; archaemetzincin K06974 amzA; archaemetzincin [EC:3.4.-.-] D Dform_00981 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family K24131 prsW; protease PrsW [EC:3.4.-.-] D Dform_00051 Protease prsW family protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Dform_01529 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D Dform_01730 aprX; serine protease AprX K17734 aprX; serine protease AprX [EC:3.4.21.-] D Dform_00287 aprX; serine protease AprX K17734 aprX; serine protease AprX [EC:3.4.21.-] D Dform_01965 aprX; serine protease AprX K17734 aprX; serine protease AprX [EC:3.4.21.-] D Dform_00801 clpP; ATP-dependent Clp protease, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Dform_02019 lon; ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Dform_00317 PDZ domain-containing secreted protein K07177 K07177; Lon-like protease D Dform_00020 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Dform_01413 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dform_01093 Lysophospholipase, alpha-beta hydrolase superfamily K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D Dform_02032 prc|ctpA; carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Dform_00244 PmbA protein K03592 pmbA; PmbA protein C 01003 Glycosyltransferases [BR:dfo01003] D Dform_01114 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Dform_01291 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Dform_01583 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Dform_01206 pimA; phosphatidylinositol alpha-mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D Dform_01432 glgA; starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Dform_01049 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dfo01005] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dfo01011] D Dform_01068 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dform_01069 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] C 01004 Lipid biosynthesis proteins [BR:dfo01004] D Dform_01341 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dform_00766 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dform_01342 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dform_01190 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dform_00618 acetyltransferase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Dform_01027 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_01030 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_00694 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Dform_00333 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_00768 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_02194 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01575 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01584 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_00022 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dform_01849 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:dfo01008] C 01006 Prenyltransferases [BR:dfo01006] D Dform_01805 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dform_01677 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dform_00839 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Dform_00138 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:dfo01007] D Dform_00154 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dform_00956 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dform_01853 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dform_00119 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dform_00588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dform_01903 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dform_01032 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dform_01165 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dform_01628 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dform_00631 lysS; lysyl-tRNA synthetase, class 2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dform_00799 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dform_00711 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dform_00025 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dform_00993 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dform_00630 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dform_01596 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dform_00865 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dform_00068 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dform_01633 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dform_01632 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dform_00841 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dform_00397 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D Dform_00899 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00926 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_00714 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dform_01518 patB|malY; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dform_00597 acetylornithine/N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Dform_01783 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Dform_00023 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dfo00194] D Dform_00872 F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Dform_00873 atpD; F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Dform_00874 F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Dform_00875 atpA; F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Dform_00876 F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Dform_00877 F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Dform_00878 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Dform_00879 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dform_00907 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dform_00880 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 atpI; ATP synthase protein I D Dform_00908 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dfo03000] D Dform_02008 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Dform_02102 MerR family transcriptional regulator, heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Dform_00167 Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dform_02045 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dform_00006 Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dform_01936 Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dform_02002 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_00503 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01113 CRP/FNR family transcriptional regulator, anaerobic regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_01467 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dform_00829 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinase K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D Dform_00479 Rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Dform_00098 Rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Dform_00125 Rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Dform_00120 Helix-turn-helix domain-containing protein K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D Dform_01939 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Dform_00705 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Dform_01461 Helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Dform_01943 Helix-turn-helix domain-containing protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator D Dform_01707 Transcriptional regulator, contains XRE-family HTH domain K22299 rghR; HTH-type transcriptional regulator, competence development regulator D Dform_00262 Helix-turn-helix domain-containing protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator D Dform_01314 hypothetical protein K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI D Dform_02054 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D Dform_01101 putative transcriptional regulator K07730 K07730; putative transcriptional regulator D Dform_01895 4Fe-4S binding domain-containing protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dform_02184 4Fe-4S binding domain-containing protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dform_01450 chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Dform_00171 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D Dform_01419 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Dform_00168 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D Dform_01663 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D Dform_01644 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dfo03021] D Dform_00220 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dform_00954 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dform_00953 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dform_01084 RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor D Dform_00307 RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor D Dform_01306 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dform_01212 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D Dform_01343 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D Dform_01220 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG D Dform_00168 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D Dform_00979 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Dform_02096 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dfo03019] D Dform_01846 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dform_01534 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dform_02197 rny; ribonucrease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D Dform_01495 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Dform_00969 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dform_01185 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dform_02096 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Dform_01426 pfkA; 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dform_00173 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Dform_02121 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dform_02086 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:dfo03011] D Dform_01272 small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Dform_00198 small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Dform_00219 small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Dform_00209 small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Dform_01039 small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Dform_00189 small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Dform_00206 small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Dform_00224 small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Dform_00191 small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Dform_00218 small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Dform_00188 small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Dform_00217 small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Dform_00205 small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Dform_01184 small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Dform_00870 small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Dform_00201 small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Dform_01037 small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Dform_00196 small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Dform_02208 small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Dform_00627 small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Dform_01218 large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Dform_00195 large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Dform_00192 large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Dform_00193 large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Dform_00204 large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Dform_00207 large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Dform_00692 large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Dform_01217 large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Dform_01219 large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Dform_01216 large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Dform_00223 large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Dform_00202 large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Dform_00211 large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Dform_00199 large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Dform_00221 large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Dform_00208 large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Dform_02084 large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Dform_00833 large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Dform_01512 large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Dform_00197 large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Dform_00194 large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Dform_00203 large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Dform_01511 large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Dform_00593 large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Dform_00200 large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Dform_00210 large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Dform_01510 large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Dform_01340 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Dform_01222 large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Dform_00832 large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Dform_00216 large subunit ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Dform_02127 large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Dform_00087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:dfo03009] D Dform_01846 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dform_02211 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D Dform_00168 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D Dform_01212 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D Dform_01343 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D Dform_01220 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG D Dform_00128 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Dform_00468 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Dform_00983 gidB|rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Dform_01645 mraW|rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Dform_01901 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Dform_01104 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Dform_01484 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Dform_01044 rumA; 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Dform_00995 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Dform_00170 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Dform_00949 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Dform_00007 protein N-acetyltransferase, RimJ/RimL family K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D Dform_00641 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Dform_00067 ruvX; putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Dform_01880 rsgA|engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Dform_01574 GTP-binding protein K03977 engA; GTPase D Dform_00862 GTP-binding protein HflX K03665 hflX; GTPase D Dform_00723 tsaC|rimN; L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Dform_00057 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Dform_01209 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Dform_01884 ribosome-associated protein K09710 ybeB; ribosome-associated protein D Dform_01580 putative rRNA maturation factor K07042 ybeY; probable rRNA maturation factor D Dform_02164 putative sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor D Dform_00053 ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D Dform_01339 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dfo03016] D Dform_00126 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Dform_00154 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dform_01596 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dform_01032 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dform_01628 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dform_01903 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dform_00588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dform_00631 lysS; lysyl-tRNA synthetase, class 2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dform_00799 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dform_00068 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dform_00993 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dform_00865 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dform_00630 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dform_00119 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dform_01165 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dform_00711 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dform_00025 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dform_01633 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dform_01632 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dform_00956 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dform_01853 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dform_00008 dtd|DTD1; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Dform_01251 histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Dform_00222 truA; tRNA pseudouridine38-40 synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Dform_01208 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Dform_00101 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00123 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_01982 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00944 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D Dform_00723 tsaC|rimN; L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Dform_00839 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Dform_02178 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Dform_01036 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Dform_02034 Bacterial RNase P class A K01978 rnpB; M1 RNA D Dform_00567 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Dform_02158 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Dform_01877 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Dform_01315 threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Dform_02007 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Dform_02082 trmD; tRNA (guanine37-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Dform_00986 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Dform_01001 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Dform_02190 queD|ptpS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Dform_00828 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dform_01462 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dform_00368 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dform_00950 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Dform_00065 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Dform_02110 tilS|mesJ; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Dform_02123 tsaD; N(6)-L-threonylcarbamoyladenine synthase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Dform_01889 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Dform_01185 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dfo03012] D Dform_01210 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Dform_00831 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Dform_01377 ATP-binding cassette, subfamily F, member 3 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Dform_01273 elongation factor Ts K02357 tsf; elongation factor Ts D Dform_01223 elongation factor Tu K02358 tuf; elongation factor Tu D Dform_00190 elongation factor G K02355 fusA; elongation factor G D Dform_01332 elongation factor G K02355 fusA; elongation factor G D Dform_02180 selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor D Dform_01325 peptide chain release factor K02835 prfA; peptide chain release factor 1 D Dform_01275 ribosome recycling factor K02838 frr; ribosome recycling factor D Dform_01326 hemK|prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Dform_00961 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Dform_00215 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Dform_01197 elongation factor P K02356 efp; elongation factor P D Dform_01198 poxA; lysyl-tRNA synthetase, class 2 K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Dform_00868 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Dform_00642 peptide chain release factor K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:dfo03110] D Dform_00095 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Dform_02101 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Dform_00173 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Dform_02121 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dform_01577 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Dform_02103 molecular chaperone DnaJ/curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D Dform_00172 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Dform_01699 HSP20 family protein K13993 HSP20; HSP20 family protein D Dform_00650 HSP20 family protein K13993 HSP20; HSP20 family protein D Dform_02122 chaperonin GroES K04078 groES; chaperonin GroES D Dform_01529 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D Dform_00335 ftsH|hflB; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dform_01905 ftsH|hflB; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dform_00879 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dform_00907 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dform_02120 hydrogenase nickel incorporation protein HypA/HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Dform_02119 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Dform_00921 thioredoxin 1 K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:dfo04131] D Dform_01887 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dform_02036 arsA; arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dform_00972 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dform_00536 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:dfo03032] D Dform_01641 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Dform_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D Dform_01140 AAA domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dform_00691 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dform_00689 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D Dform_01083 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Dform_01038 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Dform_02161 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dform_00533 dnaN; DNA polymerase-3 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01749 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01774 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_02013 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00304 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00071 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dform_00684 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dform_00639 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dform_00987 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Dform_01592 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dform_00962 ligA|ligB; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dform_00019 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dform_00061 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dform_00764 topA; DNA topoisomerase-1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dfo03036] D Dform_01846 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dform_02103 molecular chaperone DnaJ/curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D Dform_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D Dform_01646 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dform_00668 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dform_01531 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Dform_01647 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dform_00669 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dform_01450 chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Dform_00983 gidB|rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Dform_01335 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_00475 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_01736 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_01771 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_00293 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_01971 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_01975 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D Dform_00463 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Dform_01747 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] C 03400 DNA repair and recombination proteins [BR:dfo03400] D Dform_02163 ogt; methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Dform_00741 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Dform_01351 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Dform_01514 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Dform_01535 dpo; DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Dform_00556 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Dform_01594 mutM|fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dform_01906 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dform_00869 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Dform_00767 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dform_00962 ligA|ligB; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dform_01592 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dform_01094 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Dform_02075 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Dform_00584 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Dform_01719 uvrD|pcrA; DNA helicase-2 / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dform_01418 uvrD|pcrA; DNA helicase-2 / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dform_00954 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dform_00953 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dform_00220 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dform_01347 mfd; transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Dform_00537 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Dform_01041 DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D Dform_01417 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Dform_02161 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dform_00533 dnaN; DNA polymerase-3 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01749 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_01774 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_02013 DNA polymerase III sliding clamp (beta) subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00304 DNA polymerase III beta subunit, central domain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dform_00071 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dform_00684 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dform_00639 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dform_01038 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Dform_02199 recombination protein RecA K03553 recA; recombination protein RecA D Dform_01170 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Dform_01715 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_00269 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_00951 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_01950 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dform_01152 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Dform_02085 priA; replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Dform_01091 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D Dform_00994 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D Dform_00110 DNA repair protein RadA/Sms K04485 radA; DNA repair protein RadA/Sms D Dform_00590 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dform_00633 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Dform_00637 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Dform_00664 DNA repair protein RecN (Recombination protein N) K03631 recN; DNA repair protein RecN (Recombination protein N) D Dform_00677 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku D Dform_01625 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Dform_00676 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Dform_00019 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dform_00061 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dform_00764 topA; DNA topoisomerase-1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Dform_00578 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Dform_02204 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Dform_00020 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Dform_00576 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D Dform_02198 regulatory protein K03565 recX; regulatory protein D Dform_01664 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01456 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00328 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00348 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01986 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_00609 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_02040 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dform_01606 nrdA|nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:dfo03029] D Dform_01210 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Dform_00831 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Dform_01273 elongation factor Ts K02357 tsf; elongation factor Ts D Dform_01223 elongation factor Tu K02358 tuf; elongation factor Tu D Dform_00190 elongation factor G K02355 fusA; elongation factor G D Dform_01332 elongation factor G K02355 fusA; elongation factor G D Dform_00956 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dform_01628 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dform_00799 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dform_00993 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dform_00588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dform_00389 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Dform_02079 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dform_00388 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dform_01038 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Dform_00173 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Dform_00172 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Dform_02121 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dform_02122 chaperonin GroES K04078 groES; chaperonin GroES D Dform_01577 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Dform_00101 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00123 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_01982 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_01034 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dfo02000] D Dform_01320 ATP-binding cassette, subfamily B K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Dform_01480 ATP-binding cassette, subfamily B, MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Dform_01329 tungstate transport system substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Dform_01330 tungstate transport system permease protein K05773 tupB; tungstate transport system permease protein D Dform_01331 tungstate transport system ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Dform_01403 osmoprotectant transport system substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D Dform_01400 osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Dform_01402 osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Dform_01401 osmoprotectant transport system ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Dform_01914 basic membrane protein A K07335 bmpA; basic membrane protein A and related proteins D Dform_01618 phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dform_01617 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D Dform_01616 phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein D Dform_01615 phosphate transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Dform_02175 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dform_01024 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dform_01026 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein D Dform_02171 branched-chain amino acid transport system permease K01997 livH; branched-chain amino acid transport system permease protein D Dform_01025 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D Dform_02172 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D Dform_01021 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dform_02173 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dform_02174 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dform_01023 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dform_01399 polar amino acid transport system substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Dform_01398 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Dform_01397 polar amino acid transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Dform_01123 oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01235 extracellular solute-binding protein, family 5 Middle K15580 oppA; oligopeptide transport system substrate-binding protein D Dform_01234 oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein D Dform_01233 oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein D Dform_01232 peptide/oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Dform_01231 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Dform_00931 iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dform_01980 iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dform_00904 iron complex transport system substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Dform_00903 iron complex transport system permease protein K25027 btuC; cobalamin transport system permease protein D Dform_00930 iron complex transport system permease protein K25027 btuC; cobalamin transport system permease protein D Dform_00902 iron complex transport system ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Dform_00929 iron complex transport system ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Dform_00004 cobalt/nickel transport system permease protein/cobalt/nickel transport protein K02009 cbiN; cobalt/nickel transport protein D Dform_01792 cobalt/nickel transport system permease protein K02008 cbiQ; cobalt/nickel transport system permease protein D Dform_00003 cobalt/nickel transport system permease protein K02008 cbiQ; cobalt/nickel transport system permease protein D Dform_01794 cbiM; cobalt/nickel transport system permease protein K02007 cbiM; cobalt/nickel transport system permease protein D Dform_00005 cobalt/nickel transport system permease protein K02007 cbiM; cobalt/nickel transport system permease protein D Dform_01791 cobalt/nickel transport system ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dform_00002 cobalt/nickel transport system ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dform_01238 biotin transport system substrate-specific component K03523 bioY; biotin transport system substrate-specific component D Dform_00166 zinc/manganese transport system substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Dform_01635 lipooligosaccharide transport system permease protein K09694 nodJ; lipooligosaccharide transport system permease protein D Dform_01634 lipooligosaccharide transport system ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D Dform_01652 ABC-2 type transport system permease protein K25147 berB; beta-exotoxin I transport system permease protein D Dform_01651 ABC-2 type transport system permease protein K25147 berB; beta-exotoxin I transport system permease protein D Dform_01653 ABC-2 type transport system ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein D Dform_01411 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dform_01528 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dform_01013 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dform_02125 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dform_02155 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dform_01000 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dform_01410 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dform_01527 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dform_00999 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dform_01012 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dform_02126 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dform_02154 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dform_00534 ABC transport system permease K02004 ABC.CD.P; putative ABC transport system permease protein D Dform_00535 putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dform_00702 Fe-S cluster assembly ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Dform_01909 Ion channel K10716 kch; voltage-gated potassium channel D Dform_01053 ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family D Dform_01055 ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family D Dform_00130 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D Dform_00056 small conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D Dform_01556 magnesium transporter K03284 corA; magnesium transporter D Dform_00636 magnesium transporter K03284 corA; magnesium transporter D Dform_00560 CrcB protein K06199 crcB; fluoride exporter D Dform_02114 Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dform_02095 hypothetical protein K21449 ata; trimeric autotransporter adhesin D Dform_00077 cobalt-zinc-cadmium efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D Dform_02056 zinc transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family D Dform_01659 cation:H+ antiporter K07301 yrbG; cation:H+ antiporter D Dform_01513 Na+:H+ antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D Dform_00066 NhaP-type Na+/H+ or K+/H+ antiporter K03316 nhaP; Na+:H+ antiporter D Dform_02031 monovalent cation:H+ antiporter-2, CPA2 family K26735 KEA4_5_6; K+:H+ antiporter D Dform_00776 Kef-type K+ transport system, membrane component KefB K26730 napA; Na+:H+ antiporter D Dform_00075 trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein D Dform_00072 Trk system potassium uptake protein TrkA like protein K03499 trkA; trk/ktr system potassium uptake protein D Dform_00073 trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D Dform_00076 trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D Dform_01477 chloride channel protein, CIC family K03281 clcA; chloride channel protein, CIC family D Dform_02036 arsA; arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dform_01065 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D Dform_02209 arsenite transporter, ACR3 family K03325 ACR3; arsenite transporter D Dform_00422 Na+ symporter, BASS family K03325 ACR3; arsenite transporter D Dform_01249 4-azaleucine resistance probable transporter AzlC K26605 azlC; branched chain amino acid efflux pump D Dform_01248 Branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump D Dform_01557 hypothetical protein K09125 yhhQ; queuosine precursor transporter D Dform_00108 multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein D Dform_02139 multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein D Dform_00319 hypothetical protein K03646 tolA; colicin import membrane protein D Dform_00466 hppA; K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Dform_00320 cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D Dform_01937 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Dform_00730 Mg2+ transporter-C (MgtC) family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:dfo02044] D Dform_01300 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Dform_01287 leader peptidase (prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dform_01290 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01288 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01289 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01299 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D Dform_01294 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Dform_00754 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_00387 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01236 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01872 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01293 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_00050 competence protein ComEA K02237 comEA; competence protein ComEA D Dform_02051 comEB; DCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Dform_00049 competence protein ComEC K02238 comEC; competence protein ComEC D Dform_01505 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dform_02087 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Dform_01221 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Dform_02088 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D Dform_02080 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Dform_00212 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Dform_01876 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Dform_01034 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dform_01756 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_01757 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_00656 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02186 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02187 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02188 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Dform_02185 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dfo02042] D Dform_02114 Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dform_02128 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:dfo02022] D Dform_01620 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dform_01056 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dform_01201 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00338 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_00614 two-component system, OmpR family, response regulator VicR K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01933 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01934 two-component system, OmpR family, KDP operon response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dform_01073 two-component system, OmpR family, KDP operon response regulator KdpE K07668 vicR; two-component system, OmpR family, response regulator VicR D Dform_00973 Signal transduction histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3] D Dform_01202 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Dform_01928 Response regulator receiver domain-containing protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Dform_00891 Signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dform_00918 Signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dform_01301 DNA-binding response regulator, NarL/FixJ family K07692 degU; two-component system, NarL family, response regulator DegU D Dform_01912 two-component system, NarL family, response regulator LiaR K11618 liaR; two-component system, NarL family, response regulator LiaR D Dform_00709 two-component system, NarL family, response regulator LiaR K11618 liaR; two-component system, NarL family, response regulator LiaR D Dform_01167 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR D Dform_01672 Signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:dfo02035] D Dform_00754 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_00387 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01236 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01872 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01293 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D Dform_01290 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01288 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01289 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D Dform_01299 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D Dform_01287 leader peptidase (prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dform_01294 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dfo04812] D Dform_01266 hypothetical protein K06990 MEMO1; MEMO1 family protein D Dform_01647 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dform_00669 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dform_01646 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dform_00668 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dform_00967 Cell division GTPase FtsZ K22222 cetZ; tubulin-like protein CetZ D Dform_01450 chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dfo04147] D Dform_00969 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dform_00972 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dform_00536 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dform_02121 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dform_00173 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Dform_01285 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Dform_01223 elongation factor Tu K02358 tuf; elongation factor Tu D Dform_01251 histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Dform_01027 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_01030 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dform_02193 atoB|fadA; acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dform_00230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dform_00213 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dform_00594 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dform_00595 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dform_01096 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Dform_01048 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01155 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dform_01784 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Dform_00958 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dform_02105 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dform_01328 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D Dform_00838 tpiA; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:dfo02048] D Dform_02093 mazF|chpA; mRNA interferase MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Dform_02108 looped-hinge helix DNA binding domain-containing protein, AbrB family K19156 prlF; antitoxin PrlF D Dform_01461 Helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Dform_01647 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dform_00669 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dform_00154 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dform_00101 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00123 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_01982 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dform_00309 DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:dfo01504] D Dform_01321 aac3-I; aminoglycoside 3-N-acetyltransferase I K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60] D Dform_00555 aacC; aminoglycoside 3-N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81] D Dform_02008 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dfo03100] D Dform_01434 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dform_00471 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dform_01940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dform_00834 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_00777 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_01896 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_02038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_01323 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dform_01007 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dform_01040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dform_02133 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Dform_01008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dform_01844 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dform_01679 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dform_01705 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dform_01179 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dform_02134 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dform_01016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dform_01324 tRNA-His K14226 tRNA-His; tRNA His D Dform_00257 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dform_00260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dform_02129 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_00826 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_01009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_02037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_02135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dform_00739 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dform_01100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dform_00863 tRNA-Met K14230 tRNA-Met; tRNA Met D Dform_01144 tRNA-Met K14230 tRNA-Met; tRNA Met D Dform_01548 tRNA-Met K14230 tRNA-Met; tRNA Met D Dform_01010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dform_00785 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dform_00031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dform_00821 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dform_00867 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_00774 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_01882 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_00773 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dform_01899 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dform_01226 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dform_01224 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dform_02136 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Dform_01225 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dform_00383 tRNA-Val K14237 tRNA-Val; tRNA Val D Dform_01237 tRNA-Val K14237 tRNA-Val; tRNA Val D Dform_02041 tRNA-Val K14237 tRNA-Val; tRNA Val D Dform_02176 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Dform_00087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dform_02034 Bacterial RNase P class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Dform_01821 UDP-N-acetylglucosamine 3-dehydrogenase K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374] D Dform_01308 iorA; indolepyruvate ferredoxin oxidoreductase alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Dform_01309 iorB; indolepyruvate ferredoxin oxidoreductase beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Dform_01203 lpd|pdhD; dihydrolipoamide dehydrogenase K17883 mtr; mycothione reductase [EC:1.8.1.15] D Dform_00653 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Dform_00092 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Dform_00654 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Dform_00012 di-heme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Dform_00385 dfx; superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2] D Dform_00084 fpr; ferredoxin--NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Dform_01386 mrx1; mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Dform_01178 mrx1; mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Dform_01612 Protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Dform_01267 pflA|pflC; pyruvate formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_00604 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_00606 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_00933 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_01989 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_01991 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_01604 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_00906 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_01384 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_00324 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_00152 pflX; putative pyruvate formate lyase activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dform_01866 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Dform_01864 hyfE; hydrogenase-4 component E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Dform_01863 hyfF; hydrogenase-4 component F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Dform_01661 dltE; putative oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D Dform_01409 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Dform_01485 pat; phosphinothricin acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D Dform_01440 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D Dform_01228 mshA; D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D Dform_00165 lgt|umpA; phosphatidylglycerol:prolipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Dform_02182 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Dform_00592 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Dform_01160 O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Dform_02195 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Dform_01153 putative two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Dform_00742 tatD; TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Dform_00822 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Dform_00451 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase/mycothiol S-conjugate amidase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D Dform_01199 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Dform_01172 ridA|tdcF; 2-iminobutanoate/2-iminopropanoate deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Dform_01393 moxR; MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Dform_01812 moxR; MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Dform_00499 protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Dform_01840 protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Dform_02081 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Dform_01562 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Dform_01550 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Dform_02169 copB; Cu2+-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Dform_01658 Ca2+-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Dform_01930 Ca2+-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Dform_00412 FdhD protein K02379 fdhD; FdhD protein D Dform_01311 ferredoxin K05337 fer; ferredoxin D Dform_01284 hypothetical protein K12263 cccB; cytochrome c551 D Dform_00014 hypothetical protein K12263 cccB; cytochrome c551 D Dform_01862 Ni,Fe-hydrogenase III large subunit K15830 hycE; formate hydrogenlyase subunit 5 D Dform_00660 Flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D Dform_01327 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Dform_01496 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D Dform_00591 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D Dform_01585 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D Dform_01767 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D Dform_01473 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Dform_00824 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D Dform_00411 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D Dform_01925 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D Dform_00459 Calcineurin-like phosphoesterase K22390 ACP7; acid phosphatase type 7 B B 09192 Unclassified: genetic information processing C 99973 Transcription D Dform_00081 hypothetical protein K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D Dform_01530 metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Dform_00800 trigger factor K03545 tig; trigger factor D Dform_01443 ssrA-binding protein K03664 smpB; SsrA-binding protein D Dform_02117 hydrogenase expression/formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D Dform_02116 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Dform_02115 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Dform_00539 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE D Dform_02118 hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Dform_00392 Glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D Dform_01213 magnesium chelatase family protein K07391 comM; magnesium chelatase family protein D Dform_00625 Cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D Dform_02162 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Dform_00041 endonuclease-3 related protein K07457 K07457; endonuclease III related protein D Dform_00988 putative endonuclease K07460 yraN; putative endonuclease D Dform_00716 putative endonuclease K07461 K07461; putative endonuclease D Dform_02069 putative endonuclease K07461 K07461; putative endonuclease D Dform_00765 DNA processing protein K04096 smf; DNA processing protein D Dform_00990 translin K07477 K07477; translin D Dform_01264 putative ATPase K07478 ycaJ; putative ATPase D Dform_01559 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D Dform_02076 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D Dform_02202 REP element-mobilizing transposase RayT K07491 rayT; REP-associated tyrosine transposase D Dform_01754 putative transposase K07497 K07497; putative transposase D Dform_01997 Transposase K07497 K07497; putative transposase D Dform_01998 Transposase K07497 K07497; putative transposase D Dform_01127 Transposase K07497 K07497; putative transposase D Dform_01128 Transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Dform_00638 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Dform_01051 Formate/nitrite transporter FocA, FNT family K21990 yfdC; formate-nitrite transporter family protein D Dform_00079 inorganic phosphate transporter, PiT family K03306 TC.PIT; inorganic phosphate transporter, PiT family D Dform_01454 putative Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D Dform_00883 CO dehydrogenase maturation factor K07321 cooC; CO dehydrogenase maturation factor D Dform_00911 CO dehydrogenase maturation factor K07321 cooC; CO dehydrogenase maturation factor D Dform_01033 spoIIIJ-associated protein K06346 jag; spoIIIJ-associated protein D Dform_01333 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D Dform_00515 site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D Dform_00532 Site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D Dform_01445 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D Dform_01768 Site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility D Dform_00552 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D Dform_01043 GTP-binding protein K06207 typA; GTP-binding protein D Dform_02144 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins C 99994 Others D Dform_01613 phosphate transport system protein K02039 phoU; phosphate transport system protein D Dform_01438 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Dform_00121 putative membrane protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D Dform_01491 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Dform_00770 DEAD/DEAH box helicase domain-containing protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Dform_00635 tRNA-binding protein K06878 K06878; tRNA-binding protein D Dform_01365 putative drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily D Dform_01183 Transport protein K06994 K06994; putative drug exporter of the RND superfamily D Dform_01762 NTE family protein K07001 K07001; NTE family protein D Dform_02151 NTE family protein K07001 K07001; NTE family protein D Dform_00682 putative hydrolase of the HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily D Dform_00965 Fe-S cluster assembly iron-binding protein IscA K15724 erpA; iron-sulfur cluster insertion protein D Dform_00701 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D Dform_01111 membrane protein K07058 K07058; membrane protein D Dform_01537 membrane protein K07058 K07058; membrane protein D Dform_00644 Dienelactone hydrolase family protein K07100 K07100; putative phosphoribosyl transferase D Dform_00996 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Dform_01856 PhnB protein K04750 phnB; PhnB protein D Dform_01493 LemA protein K03744 lemA; LemA protein D Dform_01662 hypothetical protein K08982 K08982; putative membrane protein D Dform_01667 hypothetical protein K08982 K08982; putative membrane protein D Dform_01668 hypothetical protein K08982 K08982; putative membrane protein C 99997 Function unknown D Dform_00058 hypothetical protein K06888 K06888; uncharacterized protein D Dform_01482 hypothetical protein K06889 K06889; uncharacterized protein D Dform_00623 hypothetical protein K06929 K06929; uncharacterized protein D Dform_00339 Fe-S-cluster containining protein K06940 K06940; uncharacterized protein D Dform_01885 hypothetical protein K06940 K06940; uncharacterized protein D Dform_01490 hypothetical protein K06940 K06940; uncharacterized protein D Dform_02070 hypothetical protein K06940 K06940; uncharacterized protein D Dform_00698 hypothetical protein K06940 K06940; uncharacterized protein D Dform_01741 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein D Dform_00343 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein D Dform_00871 UPF0109 family protein K06960 K06960; uncharacterized protein D Dform_02212 hypothetical protein K06973 K06973; uncharacterized protein D Dform_00159 hypothetical protein K06996 K06996; uncharacterized protein D Dform_01765 hypothetical protein K07003 K07003; uncharacterized protein D Dform_00337 hypothetical protein K07003 K07003; uncharacterized protein D Dform_01703 hypothetical protein K07006 K07006; uncharacterized protein D Dform_00258 hypothetical protein K07006 K07006; uncharacterized protein D Dform_01993 hypothetical protein K07006 K07006; uncharacterized protein D Dform_02006 hypothetical protein K07006 K07006; uncharacterized protein D Dform_01465 hypothetical protein K07006 K07006; uncharacterized protein D Dform_00231 hypothetical protein K07028 K07028; uncharacterized protein D Dform_02157 hypothetical protein K07045 K07045; uncharacterized protein D Dform_02192 hypothetical protein K07068 K07068; uncharacterized protein D Dform_01500 hypothetical protein K07089 K07089; uncharacterized protein D Dform_00358 hypothetical protein K07090 K07090; uncharacterized protein D Dform_01555 hypothetical protein K07090 K07090; uncharacterized protein D Dform_00028 hypothetical protein K07090 K07090; uncharacterized protein D Dform_01638 hypothetical protein K07137 K07137; uncharacterized protein D Dform_00243 hypothetical protein K07159 K07159; uncharacterized protein D Dform_00789 hypothetical protein K07159 K07159; uncharacterized protein D Dform_01642 hypothetical protein K07164 K07164; uncharacterized protein D Dform_00798 hypothetical protein K08999 K08999; uncharacterized protein D Dform_00142 hypothetical protein K09117 K09117; uncharacterized protein D Dform_01561 hypothetical protein K09122 K09122; uncharacterized protein D Dform_00564 hypothetical protein K09131 K09131; uncharacterized protein D Dform_00561 hypothetical protein K09137 K09137; uncharacterized protein D Dform_01825 hypothetical protein K09726 K09726; uncharacterized protein D Dform_00756 hypothetical protein K09740 K09740; uncharacterized protein D Dform_00771 hypothetical protein K09764 K09764; uncharacterized protein D Dform_01408 hypothetical protein K09807 K09807; uncharacterized protein D Dform_01492 hypothetical protein K09981 K09981; uncharacterized protein D Dform_00665 hypothetical protein K07502 yprB; uncharacterized protein D Dform_00078 hypothetical protein K07220 K07220; uncharacterized protein D Dform_01211 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024