+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Drosophila grimshawi
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 6561979 mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 6565059 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 6566064 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 6566047 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 6560499 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 6558649 ATP-dependent RNA helicase laf-1 K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 6562089 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 6566283 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 6568059 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 6557329 cleavage and polyadenylation specificity factor subunit 5 isoform X2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 6556982 cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 6568947 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 6569091 uncharacterized protein LOC6569091 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 6569138 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 6567682 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 6563476 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 116805250 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 6564344 cleavage and polyadenylation specificity factor subunit 6 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 6563828 pre-mRNA 3' end processing protein WDR33 K15542 PFS2; polyadenylation factor subunit 2
E 6561965 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 6561426 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 6558123 serine/threonine-protein phosphatase PP1-2 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6559688 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6559689 serine/threonine-protein phosphatase alpha-3 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6560027 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6559028 serine/threonine-protein phosphatase alpha-3 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6563328 serine/threonine-protein phosphatase alpha-1 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6565163 serine/threonine-protein phosphatase beta isoform isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6568186 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6569452 serine/threonine-protein phosphatase alpha-3 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6564536 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 6563741 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 6563477 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 6564703 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3
E 116805603 protein suppressor of forked-like K14408 CSTF3; cleavage stimulation factor subunit 3
E 6564360 symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 6566562 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 6559949 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 116805244 probable small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 6569088 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 6565212 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 6567682 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 6563476 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 6563477 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 6564360 symplekin K06100 SYMPK; symplekin
E 6570870 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
E 6570869 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
D DRB sensitivity inducing factor (DSIF) complex
E 6559221 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 6560352 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 6563419 N6-adenosine-methyltransferase MT-A70-like protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 6562748 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 6563244 N(6)-adenine-specific methyltransferase METTL4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 6561347 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 6561309 pre-mRNA-splicing regulator female-lethal(2)D isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 6559393 protein virilizer K22910 VIRMA; protein virilizer
E 6560879 RNA-binding protein spenito K13190 RBM15; RNA-binding protein 15
E 6566514 E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 6568880 poly(A) polymerase type 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 6567923 poly(A) RNA polymerase gld-2 homolog A isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 6562495 zinc finger protein swm K13192 RBM26; RNA-binding protein 26
E 6559149 TAR DNA-binding protein 43 isoform X2 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 6556580 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 6558345 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 6564292 zinc finger CCCH domain-containing protein 14 isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 6559911 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
E 6559892 protein mago nashi K12877 MAGOH; protein mago nashi
E 6563918 THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 6562731 ATP-dependent RNA helicase WM6 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 6568470 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 6568253 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 6568071 mediator of RNA polymerase II transcription subunit 12 K14323 CASC3; protein CASC3
E 6563438 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 6562348 apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 6564894 suppressor protein SRP40 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 6563710 RNA-binding protein with serine-rich domain 1-A K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 6557596 serine/arginine repetitive matrix protein 1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 6568129 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 6566579 THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 6567943 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 6563918 THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 6559342 LOW QUALITY PROTEIN: THO complex subunit 5 K13174 THOC5; THO complex subunit 5
E 6558416 THO complex subunit 6 K13175 THOC6; THO complex subunit 6
E 6558673 THO complex protein 7 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 6557725 PCI domain-containing protein 2 homolog K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 6562695 probable 26S proteasome complex subunit sem1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 6563983 enhancer of yellow 2b transcription factor K11368 ENY2; enhancer of yellow 2 transcription factor
E 6564611 enhancer of yellow 2 transcription factor K11368 ENY2; enhancer of yellow 2 transcription factor
E 6565178 protein xmas-2 K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 6560273 nucleoprotein TPR isoform X1 K09291 TPR; nucleoprotein TPR
E 6568817 protein Rae1 K14298 RAE1; mRNA export factor
E 6563679 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 6568270 nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 6561178 nuclear pore complex protein Nup75 K14304 NUP85; nuclear pore complex protein Nup85
E 6563369 nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 6559435 nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 6560013 probable nucleoporin Nup54 K14308 NUP54; nuclear pore complex protein Nup54
E 6561313 nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 6567520 nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 6564414 nuclear pore complex protein Nup93-1 K14309 NUP93; nuclear pore complex protein Nup93
E 6569196 nuclear pore complex protein Nup93-1 K14309 NUP93; nuclear pore complex protein Nup93
E 6567595 nuclear pore complex protein Nup98-Nup96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 6562361 nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 6567499 nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 6560776 nucleoporin Nup188 K14311 NUP188; nuclear pore complex protein Nup188
E 116805643 nuclear pore complex protein Nup153 K14296 NUP153; nuclear pore complex protein Nup153
E 6567083 nuclear pore complex protein Nup154 K14312 NUP155; nuclear pore complex protein Nup155
E 6562181 nuclear pore complex protein Nup160 homolog K14303 NUP160; nuclear pore complex protein Nup160
E 6564759 nucleoporin Nup35 K14313 NUP35; nuclear pore complex protein Nup53
E 6566320 nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 6560000 nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 6561008 nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 6563604 mucin-5AC K14316 POM121; nuclear pore complex protein Nup121
E 6567636 nuclear pore complex protein Nup58 K14307 NUPL1; nucleoporin p58/p45
E 6566709 nucleoporin AMO1 K14321 NUPL2; nucleoporin-like protein 2
E 6568121 nucleoporin Ndc1 K14315 NDC1; nucleoporin NDC1
E 6559599 nucleoporin seh1 K14299 SEH1; nucleoporin SEH1
E 6567589 E3 SUMO-protein ligase RanBP2 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 6564477 aladin isoform X1 K14320 AAAS; aladin
E 6561035 nucleoporin Gle1 K18723 GLE1; nucleoporin GLE1
E 6563742 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 6564525 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 6567990 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 116805827 uncharacterized protein LOC116805827 K14284 NXF; nuclear RNA export factor
E 6565869 NTF2-related export protein isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
E 6566824 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2
E 6566051 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2
E 116805860 NTF2-related export protein-like K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 6558317 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 6566364 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 6560302 acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X2 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 6566328 ELAV-like protein 2 isoform X2 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 6564949 protein elav K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 6566445 LOW QUALITY PROTEIN: protein elav K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 6562238 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 6560158 transitional endoplasmic reticulum ATPase TER94 isoform X3 K13525 VCP; transitional endoplasmic reticulum ATPase
E 6566492 exportin-1 K14290 XPO1; exportin-1
E 6564739 ran-binding protein 16 K18460 XPO7; exportin-7
E 6561595 ran GTPase-activating protein K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 6556563 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6557872 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6558273 eukaryotic translation initiation factor 4E1 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 6558982 eukaryotic translation initiation factor 4E1 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 6563552 eukaryotic translation initiation factor 4E type 2 isoform X2 K03259 EIF4E; translation initiation factor 4E
E 6565483 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6565772 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6562212 eukaryotic initiation factor 4A isoform X1 K03257 EIF4A; translation initiation factor 4A
E 6559178 eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 6570305 eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 6563816 eukaryotic translation initiation factor 4B isoform X2 K03258 EIF4B; translation initiation factor 4B
E 6569828 probable serine/threonine-protein kinase clkA K24086 EIF4H; translation initiation factor 4H
E 6571660 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 6562049 eukaryotic translation initiation factor 4E-binding protein K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 6562050 eukaryotic translation initiation factor 4E-binding protein K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 6570302 eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 116804947 protein angel K18729 ANGEL; protein angel
E 6569615 synaptic functional regulator FMR1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 6567398 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 6567475 histone-lysine N-methyltransferase, H3 lysine-79 specific isoform X1 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 6556531 translational regulator orb2 isoform X4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 6562986 serine/threonine-protein kinase pakB isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 6567983 ATP-dependent RNA helicase bel isoform X2 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 6570314 GIGYF family protein Gyf K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 6560416 polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein
E 6568909 uncharacterized protein LOC6568909 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 6558488 deformed epidermal autoregulatory factor 1 isoform X2 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 6569181 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 6563195 density-regulated protein homolog K24272 DENR; density-regulated protein
E 6564724 density-regulated protein homolog K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 116805081 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 6568524 heterogeneous nuclear ribonucleoprotein A1 isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 6563706 heterogeneous nuclear ribonucleoprotein 87F K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 6563707 ribonucleoprotein RB97D isoform X1 K14411 MSI; RNA-binding protein Musashi
E 6566979 heterogeneous nuclear ribonucleoprotein 27C K14411 MSI; RNA-binding protein Musashi
E 6567679 ribonucleoprotein RB97D isoform X2 K14411 MSI; RNA-binding protein Musashi
E 6563237 poly(U)-binding-splicing factor PUF60-B isoform X2 K14411 MSI; RNA-binding protein Musashi
E 6557797 RNA-binding protein Musashi homolog Rbp6 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 6558145 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 6570123 protein pelota K06965 PELO; protein pelota
E 6559306 polyadenylate-binding protein 2 isoform X2 K14396 PABPN1; polyadenylate-binding protein 2
E 6556637 DEAD-box helicase Dbp80 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 6559134 pre-mRNA-splicing factor syf1 homolog K12867 SYF1; pre-mRNA-splicing factor SYF1
E 6563964 uncharacterized protein LOC6563964 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 6558798 regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 6559139 uncharacterized protein LOC6559139 K18733 LARP6; la-related protein 6
E 6570319 transcriptional activator protein Pur-beta K21772 PURA; transcriptional activator protein Pur-alpha
E 6565358 uncharacterized protein LOC6565358 K22414 POLDIP3; polymerase delta-interacting protein 3
E 6567100 leukocyte receptor cluster member 8 homolog K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 6556526 eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 6562336 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 6564880 regulator of nonsense transcripts 1 homolog isoform X2 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 6565792 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 6559919 regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 6562894 serine/threonine-protein phosphatase PP2A K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 6562903 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 6568038 protein phosphatase PP2A 55 kDa regulatory subunit isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 6567930 uncharacterized protein LOC6567930 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 6567568 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 6568055 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 6569502 serine/threonine-protein kinase Smg1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 6562724 protein SMG5 K11125 SMG5; protein SMG5
E 6567615 telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 6562118 protein SMG8 K18734 SMG8; protein SMG8
E 6569239 protein SMG9 K18735 SMG9; protein SMG9
E 6570314 GIGYF family protein Gyf K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 6557384 selenocysteine insertion sequence-binding protein 2 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 6569383 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 6561277 GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 6565795 protein penguin K14844 PUF6; pumilio homology domain family member 6
E 6560714 unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 6562557 protein bicaudal D K18739 BICD; protein bicaudal D
D Factors that have mRNA localization signals
E 6560454 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 6566198 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 6565066 myc protein K04377 MYC; Myc proto-oncogene protein
E 6564369 homeotic protein bicoid K18659 BCD; homeotic protein bicoid
E 6557963 T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 6557848 T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 6557666 T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 6563514 protein nanos K18741 NANOS1; protein nanos 1
E 6567956 maternal effect protein oskar K18742 OSK; maternal effect protein oskar
E 6565237 DNA-binding protein K10 isoform X2 K02524 K10; DNA binding protein (fs(1)K10, female sterile(1)K10)
E 6566405 protein gurken K02447 GRK; protein gruken
E 6561289 protein deadpan K09090 HESN; hairy and enhancer of split, invertebrate
E 6564339 enhancer of split mdelta protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6564340 enhancer of split mgamma protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6564342 enhancer of split mbeta protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6563566 enhancer of split m3 protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6563568 enhancer of split m5 protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6563570 enhancer of split m7 protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6563571 enhancer of split m8 protein K09090 HESN; hairy and enhancer of split, invertebrate
E 6571580 protein hairy K09090 HESN; hairy and enhancer of split, invertebrate
D Trans-acting binding proteins
E 6561024 far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 6563064 elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 6559322 elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 6569746 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 6562324 arf-GAP domain and FG repeat-containing protein 1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 6560912 maternal effect protein staufen isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 6568284 polypyrimidine tract-binding protein 1 isoform X3 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 6563619 RNA-binding protein squid isoform X1 K03102 SQD; squid
E 6556531 translational regulator orb2 isoform X4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 6562986 serine/threonine-protein kinase pakB isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 6569615 synaptic functional regulator FMR1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 6567398 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 6558379 poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 6558784 caprin homolog K18744 CAPRIN2; caprin-2
E 6562533 CUGBP Elav-like family member 2 isoform X1 K02177 BRU; bruno
E 6560545 maternal protein exuperantia K18745 EXU; maternal protein exuperantia
E 6558373 Y-box-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 6566947 protein cup K18746 CUP; protein cup
E 6565850 protein sex-lethal isoform X1 K18747 SXL; protein sex-lethal
E 6565235 sex-lethal homolog K18747 SXL; protein sex-lethal
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 6569382 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 6569124 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 6556563 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6557872 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6558273 eukaryotic translation initiation factor 4E1 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 6558982 eukaryotic translation initiation factor 4E1 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 6563552 eukaryotic translation initiation factor 4E type 2 isoform X2 K03259 EIF4E; translation initiation factor 4E
E 6565483 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6565772 eukaryotic translation initiation factor 4E1 K03259 EIF4E; translation initiation factor 4E
E 6564880 regulator of nonsense transcripts 1 homolog isoform X2 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 6567983 ATP-dependent RNA helicase bel isoform X2 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 6566973 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 6570291 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 6557082 protein LSM14 homolog B-B isoform X4 K18749 LSM14; protein LSM14
E 6558373 Y-box-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 6569195 LIM domain-containing protein jub K16682 AJUBA; LIM domain-containing protein
E 6557521 transportin-1 K18752 TNPO1; transportin-1
E 6569502 serine/threonine-protein kinase Smg1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 6562724 protein SMG5 K11125 SMG5; protein SMG5
E 6567615 telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 6569241 protein TIS11 K15308 TTP; tristetraprolin
E 116806236 protein lin-28 homolog K18754 LIN28; protein lin-28
E 6569724 uncharacterized protein LOC6569724 K04533 HD; huntingtin
E 6561495 protein bicaudal C K18756 BICC1; protein bicaudal C
E 6568524 heterogeneous nuclear ribonucleoprotein A1 isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 6563706 heterogeneous nuclear ribonucleoprotein 87F K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 6561425 cAMP-dependent protein kinase catalytic subunit 1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 6569722 cAMP-dependent protein kinase catalytic subunit 2 isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 6568540 la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 6563627 ataxin-2 homolog isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 6559921 mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 6560754 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 6557390 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 116805420 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 6566715 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 6557813 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 6561116 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 6562935 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 6557636 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 6556583 kinesin light chain K10407 KLC; kinesin light chain
E 6560714 unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 6557573 tubulin alpha-4 chain K07374 TUBA; tubulin alpha
E 6563921 tubulin alpha-1 chain K07374 TUBA; tubulin alpha
E 6568140 tubulin alpha chain K07374 TUBA; tubulin alpha
E 6569996 tubulin alpha-2 chain K07374 TUBA; tubulin alpha
E 6556531 translational regulator orb2 isoform X4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 6562986 serine/threonine-protein kinase pakB isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 6567475 histone-lysine N-methyltransferase, H3 lysine-79 specific isoform X1 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 6570311 protein Gawky isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 6561295 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 6566930 uncharacterized protein LOC6566930 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 6567449 regulator of gene activity isoform X2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 6566411 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 6567007 uncharacterized protein LOC6567007 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 116805456 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 6564809 CCR4-NOT transcription complex subunit 7 isoform X3 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 6558320 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 6568752 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 6557309 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 6564740 protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 6564741 protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 6570302 eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 6563715 DNA N6-methyl adenine demethylase K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 6556746 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 6561577 enhancer of mRNA-decapping protein 4 homolog K12616 EDC4; enhancer of mRNA-decapping protein 4
E 6565792 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 6559919 regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
E 6559884 protein wech K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 6559390 RING finger protein nhl-1 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 6563148 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 6569929 YTH domain-containing family protein K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 6563376 nucleolysin TIAR isoform X2 K13201 TIA1; nucleolysin TIA-1/TIAR
E 6568535 polyadenylate-binding protein RBP45C isoform X2 K13201 TIA1; nucleolysin TIA-1/TIAR
E 6568538 nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 6560416 polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein
E 6560912 maternal effect protein staufen isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 6569615 synaptic functional regulator FMR1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 6563708 ras GTPase-activating protein-binding protein 1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 6558367 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 6559447 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 6562212 eukaryotic initiation factor 4A isoform X1 K03257 EIF4A; translation initiation factor 4A
E 6568470 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 6563816 eukaryotic translation initiation factor 4B isoform X2 K03258 EIF4B; translation initiation factor 4B
E 6559178 eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 6570305 eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 116805666 LOW QUALITY PROTEIN: ribosomal protein S6 kinase 2 beta K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 6558483 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 6561900 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 6563742 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 6564525 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 6567990 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 116805827 uncharacterized protein LOC116805827 K14284 NXF; nuclear RNA export factor
E 6569456 histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 6558154 tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 6559921 mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 6566973 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 6556746 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 6561577 enhancer of mRNA-decapping protein 4 homolog K12616 EDC4; enhancer of mRNA-decapping protein 4
E 6563715 DNA N6-methyl adenine demethylase K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 6560754 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 6557390 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 116805420 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 6566715 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 6557813 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 6561116 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 6562935 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 6557636 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 6569382 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 6563776 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D Other 5'-3' decay factors
E 6564358 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 6558163 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 6561626 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 6560702 exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 6570242 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 6561711 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 6563020 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 6558564 exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 6559112 exosome complex exonuclease RRP42 K12589 RRP42; exosome complex component RRP42
E 6558259 exosome complex component rrp45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 6564173 exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 6563253 exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 6565222 uncharacterized protein LOC6565222 K12592 C1D; exosome complex protein LRP1
E 6566679 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 6567825 inactive non-canonical poly(A) RNA polymerase protein Trf4-2 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 6567053 non-canonical poly(A) RNA polymerase protein Trf4-1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 6566160 LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase protein Trf4-1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 6566498 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 6560345 tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3
E 6556747 vegetative incompatibility protein HET-E-1 K12602 WDR61; WD repeat-containing protein 61
E 6567583 WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 116805456 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 6561295 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 6566930 uncharacterized protein LOC6566930 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 6567449 regulator of gene activity isoform X2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 6566411 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 6567007 uncharacterized protein LOC6567007 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 6564809 CCR4-NOT transcription complex subunit 7 isoform X3 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 6558320 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 6566056 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 6564278 CCR4-NOT transcription complex subunit 10 isoform X2 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 6568752 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 6557309 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 6562474 ATP-dependent DNA/RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 6564740 protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 6564741 protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 116805427 LOW QUALITY PROTEIN: nocturnin K18764 NOCT; nocturnin [EC:3.1.3.108]
E 6564358 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 116806483 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 6558163 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C Other degradation factors
D RNases
E 6567357 probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 6559303 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 6567591 probable oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 6570241 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 6567695 polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 6559765 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 6560003 heat shock 70 kDa protein cognate 5 K04043 dnaK; molecular chaperone DnaK
E 6562869 60 kDa heat shock protein homolog 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 6562062 60 kDa heat shock protein homolog 1, mitochondrial isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 6569258 heat shock protein 60A K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 6560702 exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 6561626 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 6561711 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 6559112 exosome complex exonuclease RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024