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Transcription Machinery - Drosophila grimshawi
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E 6569252 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E 6570411 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E 6561411 DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 6562570 DNA-directed RNA polymerase II subunit RPB11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E 6563409 transcriptional adapter 2A isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E 6563148 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 6567293 DNA-directed RNA polymerase II subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
E 6569986 uncharacterized protein LOC6569986 K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A
D Pol I, II, III common subunits
E 6559544 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 122322346 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 6558924 DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 6559526 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 6563276 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E 6567787 transcription initiation factor IIA subunit 1 isoform X1 K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 6567676 transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E 6566733 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E 6561401 TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6562500 TBP-related factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6564977 TNF receptor-associated factor family protein DDB_G0272098 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6568771 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6563196 transcription initiation factor TFIID subunit 1 isoform X1 K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E 6557039 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 6562592 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 6570252 uncharacterized protein LOC6570252 isoform X1 K14650 TAF3; transcription initiation factor TFIID subunit 3
E 6558885 transcription initiation factor TFIID subunit 4 isoform X2 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 6559069 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 6562988 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 6557942 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 6558134 transcription initiation factor TFIID subunit 6 isoform X2 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 6559279 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 6569368 transcription initiation factor TFIID subunit 8 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 6558853 proline-, glutamic acid- and leucine-rich protein 1 isoform X1 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 6563966 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 6562371 transcription initiation factor TFIID subunit 10 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 6567159 transcription initiation factor TFIID subunit 10b K03134 TAF10; transcription initiation factor TFIID subunit 10
E 6570102 transcription initiation factor TFIID subunit 11 K03135 TAF11; transcription initiation factor TFIID subunit 11
E 6563558 transcription initiation factor TFIID subunit 12 isoform X2 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 6566532 transcription initiation factor TFIID subunit 13 K03127 TAF13; transcription initiation factor TFIID subunit 13
D TFIIE
E 6556560 general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 6558700 general transcription factor IIE subunit 2 K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E 6564111 general transcription factor IIF subunit 1 K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E 6568310 general transcription factor IIF subunit 2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E 6560780 general transcription factor IIH subunit 1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 6557406 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 6562877 general transcription factor IIH subunit 3 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 6557512 general transcription factor IIH subunit 4 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 6557969 general transcription and DNA repair factor IIH helicase subunit XPB K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 6560968 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 116805248 general transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 6566064 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 6559288 CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 6557253 cyclin-H K06634 CCNH; cyclin H
C Mediator complex
D Head
E 6568430 mediator of RNA polymerase II transcription subunit 6 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 6559973 mediator of RNA polymerase II transcription subunit 8 K15129 MED8; mediator of RNA polymerase II transcription subunit 8
E 6558447 mediator of RNA polymerase II transcription subunit 11 K15131 MED11; mediator of RNA polymerase II transcription subunit 11
E 6568503 mediator of RNA polymerase II transcription subunit 17 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 6565637 mediator of RNA polymerase II transcription subunit 18 K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 6558923 mediator of RNA polymerase II transcription subunit 19 K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 6565449 mediator of RNA polymerase II transcription subunit 20 K13528 MED20; mediator of RNA polymerase II transcription subunit 20
E 6565023 mediator of RNA polymerase II transcription subunit 22 K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E 6564258 mediator of RNA polymerase II transcription subunit 28 K15141 MED28; mediator of RNA polymerase II transcription subunit 28
E 6561233 mediator of RNA polymerase II transcription subunit 29 K15142 MED29; mediator of RNA polymerase II transcription subunit 29
E 6556675 mediator of RNA polymerase II transcription subunit 30 K15143 MED30; mediator of RNA polymerase II transcription subunit 30
D Middle
E 6556647 mediator of RNA polymerase II transcription subunit 1 isoform X1 K15144 MED1; mediator of RNA polymerase II transcription subunit 1
E 6556706 mediator of RNA polymerase II transcription subunit 1 isoform X1 K15144 MED1; mediator of RNA polymerase II transcription subunit 1
E 6558242 mediator of RNA polymerase II transcription subunit 4 K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E 6568271 mediator of RNA polymerase II transcription subunit 7 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 6560951 protein NCBP2AS2 homolog K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E 6560952 mediator of RNA polymerase II transcription subunit 9 K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E 6557795 mediator of RNA polymerase II transcription subunit 10 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E 6569984 mediator of RNA polymerase II transcription subunit 21 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
D Tail
E 6557805 mediator of RNA polymerase II transcription subunit 14 isoform X1 K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E 6562400 mediator of RNA polymerase II transcription subunit 15 K15157 MED15; mediator of RNA polymerase II transcription subunit 15
E 6568784 mediator of RNA polymerase II transcription subunit 16 K15159 MED16; mediator of RNA polymerase II transcription subunit 16
D CDK-module
E 6571734 cyclin-dependent kinase 8 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 6563250 cyclin-C K15161 CCNC; cyclin-C
E 6558514 mediator of RNA polymerase II transcription subunit 12 isoform X1 K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 6558375 mediator of RNA polymerase II transcription subunit 13 isoform X1 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E 6560974 mediator of RNA polymerase II transcription subunit 23 K15166 MED23; mediator of RNA polymerase II transcription subunit 23
E 6558102 mediator of RNA polymerase II transcription subunit 24 K15167 MED24; mediator of RNA polymerase II transcription subunit 24
E 6563594 mediator of RNA polymerase II transcription subunit 25 K15168 MED25; mediator of RNA polymerase II transcription subunit 25
E 6563041 mediator of RNA polymerase II transcription subunit 27 K15170 MED27; mediator of RNA polymerase II transcription subunit 27
C Coactivators
D SAGA/TFTC/STAGA complex
E 6557099 histone acetyltransferase KAT2A K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 6560614 transcription-associated protein 1 K08874 TRRAP; transformation/transcription domain-associated protein
E 6568007 transcription initiation protein SPT3 homolog isoform X2 K11313 SUPT3H; transcription initiation protein SPT3
E 6563076 transcriptional adapter 2B isoform X1 K15127 TADA2B; transcriptional adapter 2-beta
E 6565100 transcriptional adapter 3 K11315 TADA3; transcriptional adapter 3
E 6566708 transcriptional adapter 1 K11317 TADA1; transcriptional adapter 1
E 6557039 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 6562592 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 6558885 transcription initiation factor TFIID subunit 4 isoform X2 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 6559069 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 6562988 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 6557942 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 6558134 transcription initiation factor TFIID subunit 6 isoform X2 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 6559279 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 6563966 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 6562371 transcription initiation factor TFIID subunit 10 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 6567159 transcription initiation factor TFIID subunit 10b K03134 TAF10; transcription initiation factor TFIID subunit 10
E 6563558 transcription initiation factor TFIID subunit 12 isoform X2 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 6558876 SAGA-associated factor 11 homolog 1 K11363 SGF11; SAGA-associated factor 11
E 6558802 SAGA-associated factor 11 homolog 2 K11363 SGF11; SAGA-associated factor 11
E 6561208 SAGA-associated factor 29 K11364 SGF29; SAGA-associated factor 29
E 6557105 uncharacterized protein LOC6557105 K11316 SUPT7L; STAGA complex 65 subunit gamma
E 6562417 chromodomain-helicase-DNA-binding protein 1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 6563983 enhancer of yellow 2b transcription factor K11368 ENY2; enhancer of yellow 2 transcription factor
E 6564611 enhancer of yellow 2 transcription factor K11368 ENY2; enhancer of yellow 2 transcription factor
E 6570345 ubiquitin carboxyl-terminal hydrolase nonstop K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 6556963 splicing factor 3B subunit 3 isoform X1 K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E 6557388 ATP-dependent helicase brm K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 6563882 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 6567598 SWI/SNF complex subunit SMARCC1 isoform X2 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 6566036 brahma-associated protein of 60 kDa isoform X2 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 6565383 basic proline-rich protein K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
E 6560454 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 6566198 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 6560525 actin-like protein 6A K11652 ACTL6B; actin-like protein 6B
E 6568136 trithorax group protein osa K11653 ARID1; AT-rich interactive domain-containing protein 1
E 6568830 AT-rich interactive domain-containing protein 2 K11765 ARID2; AT-rich interactive domain-containing protein 2
E 6563991 protein polybromo-1 K11757 PBRM1; protein polybromo-1
D SWI/SNF complex
E 6563882 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E 6562904 transcription elongation factor S-II K03145 TFIIS; transcription elongation factor S-II
E 6559221 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 6560352 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
E 6565932 transcription elongation factor SPT6 K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E 6567978 transcription termination factor 2 K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-]
E 6569091 uncharacterized protein LOC6569091 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 6569138 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 6563476 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 116805250 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 6558123 serine/threonine-protein phosphatase PP1-2 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6559688 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6559689 serine/threonine-protein phosphatase alpha-3 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6560027 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6559028 serine/threonine-protein phosphatase alpha-3 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6563328 serine/threonine-protein phosphatase alpha-1 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6565163 serine/threonine-protein phosphatase beta isoform isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6568186 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6569452 serine/threonine-protein phosphatase alpha-3 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 6564360 symplekin K06100 SYMPK; symplekin
E 6564536 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 6563776 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 6564790 decapping nuclease DXO homolog K14845 RAI1; RAT1-interacting protein
E 6558632 regulation of nuclear pre-mRNA domain-containing protein 1A K15559 RTT103; regulator of Ty1 transposition protein 103
E 6566417 protein no-on-transient A K13219 SFPQ; splicing factor, proline- and glutamine-rich
E 6564968 protein no-on-transient A K13219 SFPQ; splicing factor, proline- and glutamine-rich
E 6561268 SR-related and CTD-associated factor 4 isoform X1 K13191 RBM16; RNA-binding protein 16
E 6558752 probable helicase senataxin K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E 6565796 putative peptidyl-prolyl cis-trans isomerase dodo K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E 6567478 RNA polymerase II-associated factor 1 homolog K15174 PAF1; RNA polymerase II-associated factor 1
E 6562883 uncharacterized protein LOC6562883 K15174 PAF1; RNA polymerase II-associated factor 1
E 6563911 parafibromin K15175 CDC73; parafibromin
E 6557861 RNA polymerase-associated protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 6568690 RNA polymerase-associated protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 6567450 another transcription unit protein K15177 LEO1; RNA polymerase-associated protein LEO1
E 6560448 RNA polymerase-associated protein Rtf1 K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
E 6564153 negative elongation factor B K15180 COBRA1; negative elongation factor B
E 6564997 negative elongation factor B K15180 COBRA1; negative elongation factor B
E 6569024 negative elongation factor D K15181 TH1L; negative elongation factor C/D
E 6557079 negative elongation factor E K15182 RDBP; negative elongation factor E
D Super elongation complex (SEC)
E 6558554 RNA polymerase II elongation factor Ell K15183 ELL; RNA polymerase II elongation factor ELL
E 6559116 ell-associated factor Eaf K15186 EAF; ELL-associated factor
E 6562994 protein ENL K15187 MLLT1_3; YEATS domain-containing protein 1/3
E 6557064 cyclin-T K15188 CCNT; cyclin T
E 6559543 cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D Little elongation complex (LEC)
E 6558554 RNA polymerase II elongation factor Ell K15183 ELL; RNA polymerase II elongation factor ELL
D Brd4/P-TEFb complex
E 6557064 cyclin-T K15188 CCNT; cyclin T
E 6559543 cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E 6564460 protein HEXIM1 K15189 HEXIM1_2; protein HEXIM1/2
E 6568627 probable RNA methyltransferase CG1239 K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E 6564792 la-related protein 7 K15191 LARP7; La-related protein 7
E 6557064 cyclin-T K15188 CCNT; cyclin T
E 6559543 cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D DBIRD complex
D Others
E 6567599 TATA-binding protein-associated factor 172 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E 6561771 protein Dr1 K21751 DR1; down-regulator of transcription 1
E 6568949 dr1-associated corepressor K21752 DRAP1; Dr1-associated corepressor
E 6564499 protein SPT2 homolog isoform X2 K15193 SPTY2D1; protein SPT2
E 6566444 AF4/FMR2 family member lilli K15194 AFF2; AF4/FMR2 family member 2
E 6559239 RNA polymerase II subunit A C-terminal domain phosphatase K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E 6557377 phosphatase Herzog isoform X1 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 6565349 IWS1-like protein K17498 SPN1; transcription factor SPN1
E 6566605 LOW QUALITY PROTEIN: uncharacterized protein LOC6566605 K17494 CSRNP; cysteine/serine-rich nuclear protein
E 6559155 RNA polymerase II-associated protein 3 K23002 RPAP3; RNA polymerase II-associated protein 3
E 6562071 cyclin-K K23326 CCNK; cyclin K
E 6558706 GPN-loop GTPase 2 K24104 GPN; GPN-loop GTPase
E 6564080 GPN-loop GTPase 3 K24104 GPN; GPN-loop GTPase
E 6563720 GPN-loop GTPase 1 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E 6565857 DNA-directed RNA polymerase III subunit RPC1 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E 6560284 DNA-directed RNA polymerase III subunit RPC2 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E 6562760 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 6566591 probable DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E 6564322 DNA-directed RNA polymerase III subunit RPC3 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E 6558313 DNA-directed RNA polymerase III subunit RPC4 isoform X1 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 6556461 DNA-directed RNA polymerase III subunit RPC5 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E 6567907 probable DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 6558939 DNA-directed RNA polymerase III subunit RPC7 isoform X1 K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 6558625 DNA-directed RNA polymerase III subunit RPC8 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E 6564725 DNA-directed RNA polymerase III subunit RPC9 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E 6560268 DNA-directed RNA polymerase III subunit RPC10 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E 6559544 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 122322346 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 6558924 DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 6559526 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 6563276 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E 6565821 zinc finger protein 436 K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E 6561401 TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6562500 TBP-related factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6564977 TNF receptor-associated factor family protein DDB_G0272098 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6568771 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6568111 transcription factor IIIB 90 kDa subunit K15196 BRF1; transcription factor IIIB 90 kDa subunit
D TFIIIC
E 6561594 general transcription factor 3C polypeptide 1 K15199 GTF3C1; general transcription factor 3C polypeptide 1
E 6557139 uncharacterized protein LOC6557139 K15200 GTF3C2; general transcription factor 3C polypeptide 2
E 6559675 general transcription factor 3C polypeptide 3 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E 6558757 uncharacterized protein LOC6558757 isoform X1 K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
E 6566594 general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 116804931 uncharacterized protein LOC116804931 K15203 GTF3C6; general transcription factor 3C polypeptide 6
D TFIIIC, fungi type
E 6566594 general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 6559675 general transcription factor 3C polypeptide 3 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E 6567216 snRNA-activating protein complex subunit 1 K15208 SNAPC1; snRNA-activating protein complex subunit 1
E 6559305 snRNA-activating protein complex subunit 3 K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
E 6561389 POU domain protein 2 isoform X1 K09364 POU2F; POU domain transcription factor, class 2
E 6561451 protein nubbin isoform X2 K09364 POU2F; POU domain transcription factor, class 2
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E 6561222 LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E 6562065 DNA-directed RNA polymerase I subunit RPA2 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E 6562760 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 6566591 probable DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E 6563181 uncharacterized protein LOC6563181 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E 6566975 probable DNA-directed RNA polymerase I subunit RPA43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E 6568522 DNA-directed RNA polymerase I subunit RPA12 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E 6559544 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 122322346 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 6558924 DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 6559526 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 6563276 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E 6561401 TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6562500 TBP-related factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6564977 TNF receptor-associated factor family protein DDB_G0272098 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6568771 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 6568039 TATA box-binding protein-associated factor RNA polymerase I subunit B K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B
C Other transcription-related factors
D UBF
D Transcription initiation factors
E 6566398 RNA polymerase I-specific transcription initiation factor RRN3 K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
D Transcription elongation factors
E 6559221 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 6560352 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E 6568918 chromatin-remodeling complex ATPase chain Iswi K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E 6566733 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E 6556560 general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024