+D GENES KO
#
KEGG Orthology (KO) - Dermabacter jinjuensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:djj00010]
D COP05_01035 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D COP05_07420 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D COP05_07425 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D COP05_04090 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D COP05_01725 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_09750 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_05295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_09745 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_05285 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D COP05_05290 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D COP05_08765 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D COP05_06385 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D COP05_05180 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D COP05_01835 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D COP05_05800 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D COP05_05690 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D COP05_06205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D COP05_01705 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D COP05_06565 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_05755 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D COP05_04940 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D COP05_03215 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:djj00020]
D COP05_07365 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D COP05_05020 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D COP05_07435 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D COP05_08655 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D COP05_07850 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D COP05_06560 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D COP05_05800 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D COP05_05690 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:djj00030]
D COP05_07420 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D COP05_05315 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D COP05_09165 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D COP05_05535 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D COP05_05325 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D COP05_05320 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D COP05_07060 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D COP05_08410 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D COP05_03415 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D COP05_09930 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D COP05_09915 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_06410 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D COP05_07170 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D COP05_07155 transferase K00851 idnK; gluconokinase [EC:2.7.1.12]
D COP05_01725 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_09750 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_07425 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D COP05_04090 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:djj00040]
D COP05_09010 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D COP05_09505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D COP05_06070 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D COP05_05535 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D COP05_00255 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
C 00051 Fructose and mannose metabolism [PATH:djj00051]
D COP05_07845 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D COP05_10440 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D COP05_03420 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D COP05_03630 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D COP05_03375 mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D COP05_07425 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D COP05_04090 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D COP05_01725 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_09750 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_05295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_09745 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_07060 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D COP05_09830 hypothetical protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D COP05_02905 haloacid dehalogenase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D COP05_09770 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D COP05_09765 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D COP05_09760 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:djj00052]
D COP05_06565 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D COP05_08440 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D COP05_08340 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D COP05_02460 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D COP05_06070 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_01035 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D COP05_02255 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D COP05_03575 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D COP05_09315 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D COP05_09730 PTS fructose transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D COP05_04485 PTS fructose transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D COP05_02465 PTS lactose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D COP05_09740 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D COP05_09735 PTS sugar transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D COP05_07425 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D COP05_10615 glycoside hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D COP05_06840 alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D COP05_06845 alpha-amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D COP05_10760 glucohydrolase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:djj00053]
D COP05_09505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D COP05_07170 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00500 Starch and sucrose metabolism [PATH:djj00500]
D COP05_10615 glycoside hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D COP05_06840 alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D COP05_06845 alpha-amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D COP05_06070 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D COP05_02300 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D COP05_03215 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D COP05_05445 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D COP05_04315 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D COP05_07200 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D COP05_02540 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D COP05_10760 glucohydrolase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D COP05_04320 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D COP05_05440 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D COP05_04325 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D COP05_06240 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D COP05_06245 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D COP05_06250 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D COP05_04200 bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D COP05_02510 family 65 glycosyl hydrolase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_01035 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D COP05_07420 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D COP05_07845 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:djj00520]
D COP05_07020 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D COP05_01550 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_09620 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_07085 PTS sucrose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D COP05_04290 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D COP05_06360 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D COP05_07845 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D COP05_07940 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D COP05_07950 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D COP05_07030 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D COP05_07025 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D COP05_04575 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D COP05_03345 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D COP05_01030 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D COP05_03530 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D COP05_03485 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D COP05_01035 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D COP05_05755 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_06070 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D COP05_09505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D COP05_01410 NAD-dependent dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D COP05_08440 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D COP05_08340 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D COP05_02460 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D COP05_03575 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D COP05_07420 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D COP05_10440 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D COP05_03420 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D COP05_03630 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D COP05_03375 mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D COP05_05445 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:djj00620]
D COP05_05800 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D COP05_05690 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D COP05_07990 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D COP05_01705 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D COP05_08855 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D COP05_08850 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D COP05_05180 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D COP05_03430 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D COP05_06205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D COP05_00690 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D COP05_06130 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D COP05_03845 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D COP05_06560 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D COP05_07850 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D COP05_01175 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D COP05_01835 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D COP05_04465 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D COP05_05915 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:djj00630]
D COP05_07365 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D COP05_05020 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D COP05_03430 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D COP05_03450 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D COP05_00045 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05720 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05735 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_10860 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_03350 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D COP05_06800 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D COP05_06795 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D COP05_10480 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D COP05_07125 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D COP05_07120 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D COP05_07115 ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D COP05_08025 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:djj00640]
D COP05_08855 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D COP05_08850 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D COP05_01855 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D COP05_01860 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D COP05_01865 pyruvate dehydrogenase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D COP05_07990 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D COP05_03430 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D COP05_03450 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D COP05_08655 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D COP05_06205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:djj00650]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D COP05_07990 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D COP05_04540 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D COP05_04440 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D COP05_04445 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:djj00660]
D COP05_04440 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D COP05_04445 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D COP05_08655 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D COP05_04570 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D COP05_04455 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:djj00562]
D COP05_07375 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D COP05_06490 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D COP05_08575 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D COP05_05295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_09745 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:djj00190]
D COP05_09485 6-phosphogluconate dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D COP05_06365 NADH dehydrogenase FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D COP05_04860 ubiquinol-cytochrome C reductase K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D COP05_04855 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D COP05_04865 cystathionine beta-lyase K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D COP05_05330 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D COP05_04850 hypothetical protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D COP05_04870 cytochrome B K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D COP05_04845 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D COP05_04840 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D COP05_05045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D COP05_04680 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D COP05_04675 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D COP05_04270 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D COP05_04280 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D COP05_04275 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D COP05_04265 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D COP05_04285 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D COP05_04250 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D COP05_04260 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D COP05_04255 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D COP05_06645 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D COP05_08365 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:djj00710]
D COP05_05290 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D COP05_05285 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D COP05_01725 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_09750 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_05325 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D COP05_07060 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D COP05_05295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_09745 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_05535 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D COP05_05320 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D COP05_01175 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D COP05_01835 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:djj00720]
D COP05_01835 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D COP05_01175 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D COP05_07850 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D COP05_08655 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D COP05_07435 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D COP05_05020 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D COP05_02140 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D COP05_03355 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D COP05_08850 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D COP05_08855 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:djj00680]
D COP05_07125 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D COP05_07120 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D COP05_07115 ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D COP05_03350 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D COP05_06385 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D COP05_01175 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D COP05_01725 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_09750 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D COP05_07425 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D COP05_08855 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D COP05_08850 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D COP05_08765 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:djj00910]
D COP05_08025 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D COP05_06100 nitrite reductase (NAD(P)H) K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D COP05_06105 nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D COP05_08675 copper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D COP05_00595 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D COP05_00045 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05720 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05735 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_10860 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_08350 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
D COP05_00985 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:djj00061]
D COP05_03430 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D COP05_05820 acyl carrier protein K02078 acpP; acyl carrier protein
D COP05_05810 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D COP05_05815 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D COP05_05825 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D COP05_05455 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D COP05_06745 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01690 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_04885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:djj00071]
D COP05_06745 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01690 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_04885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
D COP05_01185 HAD-IB family hydrolase K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
C 00074 Mycolic acid biosynthesis [PATH:djj00074]
D COP05_03430 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D COP05_07935 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D COP05_05820 acyl carrier protein K02078 acpP; acyl carrier protein
D COP05_05810 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D COP05_03450 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:djj00561]
D COP05_10480 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D COP05_01705 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D COP05_00860 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D COP05_06320 haloacid dehalogenase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D COP05_01195 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_02230 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_04890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_05505 sphingosine kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D COP05_01120 sphingosine kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D COP05_06880 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D COP05_01410 NAD-dependent dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D COP05_09315 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:djj00564]
D COP05_04585 glycerol-3-phosphate acyltransferase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D COP05_01195 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_02230 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_04890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_05505 sphingosine kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D COP05_01120 sphingosine kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D COP05_07380 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D COP05_02785 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D COP05_02930 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D COP05_00585 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D COP05_01200 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:djj00600]
D COP05_02255 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D COP05_01020 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D COP05_01045 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D COP05_09315 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D COP05_01550 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_09620 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:djj01040]
D COP05_04125 lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D COP05_07165 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:djj00230]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_06410 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D COP05_08725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D COP05_07980 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D COP05_08375 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D COP05_08040 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D COP05_08010 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D COP05_08015 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D COP05_08720 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D COP05_03475 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D COP05_03480 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D COP05_07985 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D COP05_01845 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D COP05_08370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D COP05_06150 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D COP05_03425 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D COP05_06760 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D COP05_03105 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D COP05_06625 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D COP05_08860 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D COP05_08875 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D COP05_02655 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D COP05_03890 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D COP05_08835 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D COP05_05125 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D COP05_02250 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D COP05_07750 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D COP05_02290 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D COP05_07745 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D COP05_08790 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D COP05_05865 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D COP05_06145 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D COP05_06370 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D COP05_02810 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D COP05_03460 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D COP05_08740 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D COP05_00350 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D COP05_08090 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D COP05_06195 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:djj00240]
D COP05_02775 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D COP05_02655 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D COP05_03435 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D COP05_03410 uridylate kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D COP05_09975 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D COP05_05115 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D COP05_00350 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D COP05_03400 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D COP05_00020 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D COP05_10835 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D COP05_08790 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D COP05_02100 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D COP05_02250 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D COP05_07750 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D COP05_02290 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D COP05_07745 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D COP05_01620 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D COP05_04980 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D COP05_03405 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D COP05_06040 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D COP05_02910 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:djj00250]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_06870 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D COP05_00850 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D COP05_07045 isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D COP05_05365 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D COP05_09310 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D COP05_05095 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D COP05_08360 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D COP05_03250 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D COP05_03255 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D COP05_08740 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D COP05_01845 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D COP05_00595 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D COP05_00045 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05720 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05735 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_10860 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_08015 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D COP05_07940 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D COP05_08725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:djj00260]
D COP05_09525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D COP05_09520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D COP05_04210 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D COP05_03350 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D COP05_10480 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D COP05_08765 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D COP05_03830 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D COP05_03835 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D COP05_06800 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D COP05_06795 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D COP05_06865 creatininase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D COP05_02570 ferredoxin K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D COP05_02580 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D COP05_02565 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D COP05_02575 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D COP05_06690 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D COP05_08610 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D COP05_05170 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D COP05_05165 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:djj00270]
D COP05_06935 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D COP05_00955 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D COP05_06785 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D COP05_03805 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D COP05_05140 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D COP05_01000 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D COP05_03105 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D COP05_01960 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D COP05_09525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D COP05_09520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D COP05_04210 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D COP05_04460 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_00985 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D COP05_06205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D COP05_06690 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:djj00280]
D COP05_04460 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D COP05_01855 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D COP05_01860 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D COP05_01865 pyruvate dehydrogenase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D COP05_03430 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D COP05_03450 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D COP05_04540 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:djj00290]
D COP05_04570 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D COP05_04455 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D COP05_04440 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D COP05_04445 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D COP05_04450 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D COP05_04435 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D COP05_04460 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D COP05_09310 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D COP05_04465 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D COP05_05915 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:djj00300]
D COP05_09525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D COP05_09520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D COP05_01040 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D COP05_02915 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D COP05_02885 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D COP05_07355 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D COP05_07350 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D COP05_02975 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D COP05_04205 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D COP05_03060 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D COP05_03065 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:djj00220]
D COP05_03250 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D COP05_03255 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D COP05_08015 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D COP05_00045 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05720 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05735 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_10860 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_00595 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_09310 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D COP05_10485 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:djj00330]
D COP05_06860 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D COP05_00020 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D COP05_10835 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D COP05_06865 creatininase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D COP05_08820 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D COP05_08795 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D COP05_08520 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D COP05_04705 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D COP05_04710 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:djj00340]
D COP05_03155 bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D COP05_01850 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D COP05_04095 histidinol phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D COP05_00680 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:djj00350]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_01850 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:djj00360]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_01850 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D COP05_05075 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:djj00400]
D COP05_04895 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D COP05_05230 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D COP05_05305 aroD; type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D COP05_05225 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D COP05_04105 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D COP05_05220 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D COP05_05145 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D COP05_04875 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D COP05_03155 bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D COP05_05160 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D COP05_05170 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D COP05_05165 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D COP05_02560 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D COP05_05350 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D COP05_01115 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_01850 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:djj00410]
D COP05_06700 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D COP05_06580 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:djj00430]
D COP05_05095 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D COP05_08850 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D COP05_08855 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:djj00450]
D COP05_06935 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D COP05_00955 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D COP05_06785 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D COP05_03805 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D COP05_05785 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D COP05_00420 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D COP05_07105 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D COP05_07095 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D COP05_06075 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:djj00460]
D COP05_02300 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D COP05_00850 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D COP05_07045 isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D COP05_03350 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D COP05_08025 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:djj00470]
D COP05_07930 bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K01775 alr; alanine racemase [EC:5.1.1.1]
D COP05_04590 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D COP05_08015 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D COP05_03875 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D COP05_03075 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D COP05_06870 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D COP05_08610 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D COP05_02975 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D COP05_04205 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:djj00480]
D COP05_07130 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D COP05_07435 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D COP05_09165 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D COP05_05315 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D COP05_00970 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D COP05_08820 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D COP05_08795 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:djj00515]
D COP05_06470 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:djj00514]
D COP05_06470 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:djj00511]
D COP05_01020 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D COP05_01045 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D COP05_02255 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D COP05_01550 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_09620 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_09685 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:djj00542]
D COP05_04240 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:djj00541]
D COP05_06070 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D COP05_02460 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D COP05_03575 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D COP05_09505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D COP05_08445 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D COP05_09500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D COP05_09495 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D COP05_10440 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D COP05_03420 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D COP05_03630 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D COP05_03375 mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D COP05_03530 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D COP05_03485 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:djj00550]
D COP05_04575 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D COP05_03345 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D COP05_03090 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D COP05_03075 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D COP05_03060 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D COP05_04590 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D COP05_03065 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D COP05_05905 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D COP05_05610 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D COP05_03070 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D COP05_03085 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D COP05_03055 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D COP05_01380 cell division protein FtsI K05364 pbpA; penicillin-binding protein A
C 00552 Teichoic acid biosynthesis [PATH:djj00552]
D COP05_05610 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D COP05_04240 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D COP05_02455 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D COP05_06880 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D COP05_06890 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:djj00572]
D COP05_04240 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D COP05_03580 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
C 00543 Exopolysaccharide biosynthesis [PATH:djj00543]
D COP05_04240 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:djj00730]
D COP05_09120 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D COP05_04360 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D COP05_09130 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D COP05_09125 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D COP05_04605 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D COP05_04100 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D COP05_08090 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D COP05_09115 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:djj00740]
D COP05_04015 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D COP05_04000 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D COP05_04020 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D COP05_04005 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D COP05_02860 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D COP05_09130 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:djj00750]
D COP05_00790 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D COP05_06045 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
C 00760 Nicotinate and nicotinamide metabolism [PATH:djj00760]
D COP05_03860 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D COP05_03425 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D COP05_06760 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D COP05_04720 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D COP05_07260 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D COP05_00515 NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D COP05_02935 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D COP05_06810 NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D COP05_06310 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D COP05_08690 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D COP05_08685 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:djj00770]
D COP05_04440 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D COP05_04445 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D COP05_04450 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D COP05_04435 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D COP05_05740 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D COP05_06580 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D COP05_07945 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D COP05_05135 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D COP05_04630 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D COP05_05240 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D COP05_07935 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D COP05_04460 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D COP05_06700 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:djj00780]
D COP05_05825 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D COP05_05455 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D COP05_03455 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:djj00785]
D COP05_05700 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D COP05_05705 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D COP05_05800 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D COP05_05690 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D COP05_01855 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D COP05_01860 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D COP05_01865 pyruvate dehydrogenase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D COP05_06800 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D COP05_06795 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:djj00790]
D COP05_06615 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D COP05_06605 dihydroneopterin aldolase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D COP05_06610 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D COP05_03600 hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D COP05_02645 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D COP05_04015 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D COP05_01365 anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D COP05_02430 pabB; aminodeoxychorismate synthase, component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D COP05_08925 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D COP05_08915 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D COP05_08905 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D COP05_08920 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D COP05_08980 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D COP05_08555 bifunctional protein IspD/ispF K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:djj00670]
D COP05_02140 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D COP05_03355 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D COP05_03350 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D COP05_08375 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D COP05_08370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D COP05_10695 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D COP05_06800 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D COP05_02910 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D COP05_06530 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:djj00860]
D COP05_04510 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_10540 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_01465 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D COP05_01425 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D COP05_01430 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D COP05_01440 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D COP05_01435 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D COP05_06090 uroporphyrinogen III synthetase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D COP05_01455 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D COP05_01445 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D COP05_06095 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D COP05_05330 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D COP05_05045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:djj00130]
D COP05_06350 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D COP05_08390 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D COP05_08400 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D COP05_08405 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D COP05_08420 acyl-CoA synthetase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D COP05_08415 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D COP05_08425 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:djj00900]
D COP05_04540 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D COP05_04535 hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D COP05_04515 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D COP05_04525 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D COP05_04520 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D COP05_04530 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D COP05_04910 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D COP05_07860 uppS; di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D COP05_05905 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:djj00903]
D COP05_01005 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D COP05_05325 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:djj00523]
D COP05_08445 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D COP05_09500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D COP05_09495 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:djj01054]
D COP05_06870 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D COP05_08390 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D COP05_09500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:djj00946]
D COP05_02300 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:djj00332]
D COP05_04705 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D COP05_04710 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:djj00261]
D COP05_09525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D COP05_09520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D COP05_01040 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D COP05_02915 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D COP05_02885 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:djj00521]
D COP05_01035 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D COP05_09350 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D COP05_07375 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D COP05_06490 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D COP05_08575 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D COP05_08445 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D COP05_09500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D COP05_09495 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D COP05_01035 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:djj00525]
D COP05_08445 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D COP05_09500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:djj00401]
D COP05_05350 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_01850 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D COP05_05145 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D COP05_05810 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D COP05_05455 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D COP05_05820 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:djj00999]
D COP05_05140 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D COP05_02300 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:djj00625]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:djj00930]
D COP05_07170 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D COP05_01005 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:djj00626]
D COP05_08290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:djj03020]
D COP05_08260 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D COP05_08060 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D COP05_05130 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D COP05_09175 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:djj03010]
D COP05_05215 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D COP05_02765 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D COP05_08185 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D COP05_05660 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D COP05_08110 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D COP05_00450 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D COP05_08240 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D COP05_08125 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D COP05_07965 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D COP05_08220 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D COP05_08065 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D COP05_08245 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D COP05_08070 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D COP05_08130 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D COP05_02865 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D COP05_02680 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D COP05_08170 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D COP05_00460 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D COP05_08195 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D COP05_05985 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D COP05_08305 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D COP05_08200 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D COP05_08210 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D COP05_08135 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D COP05_10680 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D COP05_08120 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D COP05_08280 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D COP05_00465 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D COP05_08285 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D COP05_08310 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D COP05_07970 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D COP05_08145 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D COP05_08100 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D COP05_08180 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D COP05_08055 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D COP05_08115 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D COP05_02710 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D COP05_03200 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D COP05_04690 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D COP05_08190 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D COP05_08205 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D COP05_08140 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D COP05_06405 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D COP05_04695 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D COP05_04615 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D COP05_08175 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D COP05_08105 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D COP05_04220 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D COP05_06460 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D COP05_03330 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D COP05_00375 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D COP05_03195 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D COP05_08075 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D COP05_03265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_06345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_09910 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_03270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_06340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_09905 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_03275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_06335 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_03280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_09900 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:djj00970]
D COP05_10430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D COP05_00310 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D COP05_04740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D COP05_01335 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_04165 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_08560 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_04055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_05840 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D COP05_02150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D COP05_06220 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D COP05_04545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D COP05_06420 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D COP05_04550 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D COP05_02210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D COP05_06225 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_02095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_02525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_06235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_04025 tRNA-His K14226 tRNA-His; tRNA His
D COP05_00315 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D COP05_09155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_03905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_05185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_00485 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_05630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_03955 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D COP05_08805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D COP05_02415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D COP05_04075 tRNA-Met K14230 tRNA-Met; tRNA Met
D COP05_03325 tRNA-Met K14230 tRNA-Met; tRNA Met
D COP05_05835 tRNA-Met K14230 tRNA-Met; tRNA Met
D COP05_02145 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D COP05_01560 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D COP05_02530 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D COP05_05370 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D COP05_09585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_01135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_01170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_09940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_03320 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D COP05_09270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D COP05_02200 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D COP05_08325 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D COP05_03315 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D COP05_06215 tRNA-Val K14237 tRNA-Val; tRNA Val
D COP05_05790 tRNA-Val K14237 tRNA-Val; tRNA Val
D COP05_06230 tRNA-Val K14237 tRNA-Val; tRNA Val
D COP05_07100 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D COP05_04510 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_10540 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_04415 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D COP05_04420 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D COP05_04410 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D COP05_05655 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D COP05_04820 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D COP05_05875 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D COP05_06200 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D COP05_01125 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D COP05_07095 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D COP05_06675 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D COP05_06075 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D COP05_10695 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D COP05_02585 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D COP05_06720 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D COP05_02635 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D COP05_08800 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D COP05_01010 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D COP05_02815 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D COP05_06125 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D COP05_03235 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D COP05_03240 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D COP05_03260 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D COP05_06815 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:djj03060]
D COP05_08095 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D COP05_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D COP05_06160 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D COP05_06155 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D COP05_06165 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D COP05_00390 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D COP05_02670 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D COP05_09570 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D COP05_02665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D COP05_05515 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D COP05_07330 translocase K03117 tatB; sec-independent protein translocase protein TatB
D COP05_05510 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D COP05_02715 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D COP05_02720 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D COP05_03125 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:djj04122]
D COP05_04360 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D COP05_00985 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D COP05_03795 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D COP05_04365 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D COP05_08905 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D COP05_08925 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D COP05_08930 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D COP05_08940 thiamine biosynthesis protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D COP05_08915 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome [PATH:djj03050]
D COP05_05590 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D COP05_05570 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D COP05_05575 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:djj03018]
D COP05_04685 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D COP05_06385 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D COP05_02870 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D COP05_04810 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D COP05_04215 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D COP05_02920 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D COP05_06910 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D COP05_08895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_09220 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_08365 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D COP05_00440 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:djj03030]
D COP05_04880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_08865 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D COP05_09550 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D COP05_01615 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D COP05_05990 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D COP05_00365 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D COP05_10025 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D COP05_05860 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D COP05_00455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_04060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_10400 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_09195 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D COP05_02725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D COP05_04405 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:djj03410]
D COP05_01600 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D COP05_09250 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D COP05_06545 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D COP05_04645 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D COP05_07055 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D COP05_06110 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D COP05_03360 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D COP05_01675 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D COP05_04405 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:djj03420]
D COP05_06395 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D COP05_05260 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D COP05_07540 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D COP05_05245 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D COP05_05265 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D COP05_08695 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D COP05_07270 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D COP05_04405 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D COP05_09175 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:djj03430]
D COP05_08695 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D COP05_07270 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D COP05_07810 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D COP05_07815 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D COP05_00455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_04060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_10400 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D COP05_00365 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D COP05_09550 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D COP05_05990 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D COP05_01615 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D COP05_04880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_08865 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_04405 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:djj03440]
D COP05_00455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_04060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_10400 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_00360 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D COP05_05910 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D COP05_09535 recombination protein RecR K06187 recR; recombination protein RecR
D COP05_02950 recA; recombinase RecA K03553 recA; recombination protein RecA
D COP05_06175 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D COP05_06170 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D COP05_06180 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D COP05_00815 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D COP05_04620 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D COP05_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D COP05_00365 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D COP05_09550 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D COP05_05990 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D COP05_01615 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D COP05_04880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_08865 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_05550 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:djj03250]
D COP05_10525 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:djj02010]
D COP05_06505 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D COP05_06500 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D COP05_06495 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D COP05_06660 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D COP05_06825 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D COP05_06830 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D COP05_06835 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D COP05_10780 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D COP05_10775 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D COP05_10770 ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D COP05_08985 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D COP05_08990 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D COP05_08995 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D COP05_09650 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D COP05_09655 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D COP05_09660 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D COP05_07005 sugar ABC transporter substrate-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D COP05_07010 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D COP05_07015 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D COP05_09680 ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D COP05_09675 ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D COP05_03380 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D COP05_03395 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D COP05_03385 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D COP05_09845 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D COP05_09850 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D COP05_09855 ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D COP05_09815 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D COP05_09805 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D COP05_09810 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D COP05_01795 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D COP05_01800 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D COP05_01805 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D COP05_01810 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D COP05_00555 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D COP05_00565 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D COP05_00560 ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D COP05_06930 amino acid ABC transporter amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D COP05_06925 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D COP05_06920 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D COP05_09955 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D COP05_09960 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D COP05_08960 peptide ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D COP05_08965 peptide ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D COP05_08945 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D COP05_08950 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D COP05_08955 peptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D COP05_07530 iron ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D COP05_10690 iron siderophore-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D COP05_10210 iron siderophore-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D COP05_07525 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D COP05_10660 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D COP05_07520 ferrichrome ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D COP05_10220 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D COP05_10665 iron ABC transporter K23187 fepG; iron-siderophore transport system permease protein
D COP05_07515 fecE; Fe(3+)-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D COP05_10225 hypothetical protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D COP05_10670 cobalamin/Fe(3+)-siderophore ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D COP05_05880 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D COP05_05890 ABC transporter K09816 znuB; zinc transport system permease protein
D COP05_05885 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D COP05_09595 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D COP05_09605 zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D COP05_09610 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D COP05_09600 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D COP05_02160 BioY protein K03523 bioY; biotin transport system substrate-specific component
D COP05_03775 cell division protein K09811 ftsX; cell division transport system permease protein
D COP05_03770 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D COP05_00180 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D COP05_00175 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D COP05_09400 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D COP05_04665 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D COP05_04670 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D COP05_00295 ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:djj02060]
D COP05_09840 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D COP05_09835 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D COP05_07085 PTS sucrose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D COP05_09830 hypothetical protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D COP05_09770 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D COP05_09765 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D COP05_09760 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D COP05_09730 PTS fructose transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D COP05_04485 PTS fructose transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D COP05_02465 PTS lactose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D COP05_09740 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D COP05_09735 PTS sugar transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
C 03070 Bacterial secretion system [PATH:djj03070]
D COP05_06160 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D COP05_06155 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D COP05_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D COP05_08095 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D COP05_06165 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D COP05_00390 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D COP05_02665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D COP05_02670 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D COP05_05515 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D COP05_07330 translocase K03117 tatB; sec-independent protein translocase protein TatB
D COP05_05510 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D COP05_10395 type VI secretion protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:djj02020]
D COP05_02490 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D COP05_02495 DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D COP05_01795 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D COP05_02385 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D COP05_02405 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D COP05_02400 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D COP05_05045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D COP05_08395 peptidase K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D COP05_03640 two-component sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D COP05_03635 DNA-binding response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D COP05_00370 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D COP05_03845 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D COP05_03935 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D COP05_00745 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D COP05_03930 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D COP05_00740 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D COP05_04660 two-component sensor histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D COP05_04655 DNA-binding response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D COP05_03730 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D COP05_01660 secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D COP05_03735 type II secretion system protein F K12510 tadB; tight adherence protein B
D COP05_01655 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D COP05_03740 pilus assembly protein TadB K12511 tadC; tight adherence protein C
D COP05_00045 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05720 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05735 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_10860 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_01595 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D COP05_04680 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D COP05_04675 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D COP05_06710 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D COP05_09360 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D COP05_03530 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D COP05_08820 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D COP05_08795 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:djj02024]
D COP05_05145 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D COP05_04895 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D COP05_02385 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D COP05_07400 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D COP05_07385 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D COP05_00285 hypothetical protein K20276 bapA; large repetitive protein
D COP05_06745 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01690 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_04885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01595 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D COP05_04015 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D COP05_04000 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D COP05_00890 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D COP05_01065 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D COP05_01075 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D COP05_01060 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D COP05_01055 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D COP05_00390 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D COP05_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D COP05_08095 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D COP05_06165 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D COP05_02665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D COP05_02670 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:djj02030]
D COP05_09815 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D COP05_08160 hypothetical protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:djj02040]
D COP05_08160 hypothetical protein K02557 motB; chemotaxis protein MotB
D COP05_06930 amino acid ABC transporter amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D COP05_04925 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D COP05_06385 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:djj01501]
D COP05_07020 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D COP05_03055 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:djj01502]
D COP05_04590 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D COP05_07930 bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K01775 alr; alanine racemase [EC:5.1.1.1]
D COP05_03065 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D COP05_03070 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D COP05_03085 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D COP05_10525 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:djj01000]
C 01001 Protein kinases [BR:djj01001]
D COP05_01370 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D COP05_01375 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D COP05_04900 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D COP05_10010 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D COP05_02490 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D COP05_03640 two-component sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D COP05_09190 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D COP05_08150 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D COP05_03935 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D COP05_00745 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D COP05_04660 two-component sensor histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D COP05_03705 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:djj01009]
D COP05_00520 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D COP05_01390 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D COP05_03290 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:djj01002]
D COP05_03125 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D COP05_05625 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D COP05_07830 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D COP05_08835 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D COP05_00050 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D COP05_10865 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D COP05_00925 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D COP05_08625 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D COP05_08725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D COP05_07940 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D COP05_05365 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D COP05_01360 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D COP05_07705 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D COP05_07130 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D COP05_09320 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D COP05_06965 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D COP05_07350 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D COP05_04765 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D COP05_05040 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D COP05_08085 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D COP05_07310 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D COP05_06620 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D COP05_06190 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D COP05_08395 peptidase K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D COP05_00880 serine protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D COP05_00345 hypothetical protein K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D COP05_09110 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D COP05_09945 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D COP05_02000 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D COP05_02545 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D COP05_02550 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D COP05_10120 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D COP05_10125 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D COP05_07230 hypothetical protein K07177 K07177; Lon-like protease
D COP05_02995 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D COP05_02715 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D COP05_02720 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D COP05_01270 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D COP05_05570 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D COP05_05575 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D COP05_07045 isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
C 01003 Glycosyltransferases [BR:djj01003]
D COP05_05490 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D COP05_06470 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D COP05_06880 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D COP05_06780 alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D COP05_06890 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D COP05_05440 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D COP05_04240 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D COP05_03580 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D COP05_04200 bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D COP05_01105 glycosyl transferase family 2 K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:djj01005]
D COP05_04240 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:djj01011]
D COP05_04575 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D COP05_03345 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D COP05_03090 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D COP05_03075 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D COP05_03060 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D COP05_04590 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D COP05_07930 bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K01775 alr; alanine racemase [EC:5.1.1.1]
D COP05_03875 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D COP05_03070 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D COP05_03085 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D COP05_05610 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D COP05_00430 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D COP05_06285 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D COP05_03055 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D COP05_01380 cell division protein FtsI K05364 pbpA; penicillin-binding protein A
D COP05_00925 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D COP05_08625 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D COP05_01360 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D COP05_05645 ABC transporter substrate-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:djj01004]
D COP05_05810 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D COP05_05815 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D COP05_05825 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D COP05_05455 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D COP05_04125 lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D COP05_07165 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D COP05_06745 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01690 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_04885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01195 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_02230 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D COP05_04890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:djj01008]
D COP05_06870 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:djj01006]
D COP05_04910 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D COP05_07860 uppS; di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D COP05_05905 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D COP05_02970 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D COP05_08425 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D COP05_05330 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:djj01007]
D COP05_04510 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_10540 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_03260 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D COP05_06815 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D COP05_06675 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D COP05_01010 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D COP05_06075 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D COP05_02635 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D COP05_02585 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D COP05_06720 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D COP05_08800 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D COP05_04820 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D COP05_06125 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D COP05_05875 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D COP05_01125 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D COP05_02815 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D COP05_06200 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D COP05_05655 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D COP05_03235 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D COP05_03240 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D COP05_08330 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D COP05_09310 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D COP05_01850 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D COP05_03830 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D COP05_00955 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D COP05_01425 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D COP05_04460 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:djj00194]
D COP05_02505 ferredoxin K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D COP05_04285 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D COP05_04280 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D COP05_04275 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D COP05_04270 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D COP05_04265 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D COP05_04260 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D COP05_04255 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D COP05_04250 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:djj03000]
D COP05_01960 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D COP05_10290 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D COP05_02315 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D COP05_09015 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D COP05_10590 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D COP05_07620 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D COP05_10140 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D COP05_06895 transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D COP05_00835 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D COP05_05895 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D COP05_01595 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D COP05_07630 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D COP05_00915 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D COP05_03820 transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D COP05_02940 XRE family transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D COP05_08630 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D COP05_00540 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D COP05_09615 transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D COP05_03455 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D COP05_03985 transcriptional regulator K07727 K07727; putative transcriptional regulator
D COP05_03605 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D COP05_01575 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D COP05_03710 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D COP05_01840 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D COP05_00410 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D COP05_10320 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D COP05_02470 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D COP05_03245 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D COP05_05955 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D COP05_09115 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D COP05_09935 deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D COP05_05115 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D COP05_03005 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D COP05_03040 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:djj03021]
D COP05_09175 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D COP05_08060 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D COP05_08260 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D COP05_05130 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D COP05_04925 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D COP05_04115 RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D COP05_02825 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D COP05_05110 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D COP05_08315 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D COP05_07885 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D COP05_04215 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:djj03019]
D COP05_04685 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D COP05_04640 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D COP05_02920 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D COP05_04040 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D COP05_04810 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D COP05_06385 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D COP05_02870 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D COP05_04215 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D COP05_06910 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D COP05_08895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_09220 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_08365 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D COP05_00440 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D COP05_05500 RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D COP05_03840 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D COP05_02155 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:djj03011]
D COP05_05215 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D COP05_02765 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D COP05_08185 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D COP05_05660 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D COP05_08110 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D COP05_00450 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D COP05_08240 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D COP05_08125 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D COP05_07965 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D COP05_08220 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D COP05_08065 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D COP05_08245 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D COP05_08070 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D COP05_08130 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D COP05_02865 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D COP05_02680 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D COP05_08170 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D COP05_00460 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D COP05_08195 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D COP05_05985 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D COP05_08305 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D COP05_08200 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D COP05_08210 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D COP05_08135 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D COP05_10680 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D COP05_08120 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D COP05_00465 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D COP05_08285 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D COP05_08310 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D COP05_08280 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D COP05_07970 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D COP05_08145 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D COP05_08100 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D COP05_08180 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D COP05_08055 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D COP05_08115 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D COP05_02710 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D COP05_03200 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D COP05_04690 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D COP05_08190 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D COP05_08205 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D COP05_08140 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D COP05_04695 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D COP05_04615 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D COP05_08175 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D COP05_08105 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D COP05_04220 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D COP05_06460 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D COP05_03330 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D COP05_00375 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D COP05_03195 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D COP05_08075 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D COP05_06405 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D COP05_03275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_06335 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_03280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_09900 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_03265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_06345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_09910 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_03270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_06340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_09905 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:djj03009]
D COP05_04640 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D COP05_04040 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D COP05_05920 GTPase Era K03595 era; GTPase
D COP05_04700 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D COP05_02825 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D COP05_05110 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D COP05_08315 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D COP05_06450 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D COP05_05540 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D COP05_08020 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D COP05_02980 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D COP05_04625 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D COP05_05945 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D COP05_00400 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D COP05_03045 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D COP05_06465 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D COP05_06315 16S/23S rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D COP05_06670 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D COP05_02790 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D COP05_00865 23S rRNA (uracil(747)-C(5))-methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D COP05_08885 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D COP05_05345 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D COP05_03130 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D COP05_07550 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D COP05_07920 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D COP05_06525 hypothetical protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D COP05_02695 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D COP05_04685 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D COP05_05650 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D COP05_04810 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D COP05_04100 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D COP05_05355 cytidylate kinase K03977 engA; GTPase
D COP05_02985 hflX; GTPase HflX K03665 hflX; GTPase
D COP05_04235 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D COP05_06145 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D COP05_02845 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D COP05_04730 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D COP05_05930 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D COP05_04635 metal-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:djj03016]
D COP05_04510 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_10540 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_02815 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D COP05_02635 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D COP05_06720 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D COP05_06075 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D COP05_01010 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D COP05_08800 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D COP05_04820 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D COP05_05655 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D COP05_05875 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D COP05_06200 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D COP05_01125 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D COP05_06675 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D COP05_02585 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D COP05_06125 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D COP05_03235 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D COP05_03240 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D COP05_03260 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D COP05_06815 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D COP05_08760 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D COP05_05940 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D COP05_07640 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D COP05_05595 SAM-dependent methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D COP05_02500 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D COP05_07975 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D COP05_02850 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D COP05_04360 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D COP05_04235 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D COP05_02970 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D COP05_07105 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D COP05_00380 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D COP05_05760 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D COP05_03885 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D COP05_06270 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D COP05_07220 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D COP05_09970 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D COP05_02960 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D COP05_02700 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D COP05_05635 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D COP05_03205 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D COP05_08885 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D COP05_04365 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D COP05_03795 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D COP05_01775 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D COP05_01505 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D COP05_06630 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D COP05_07925 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D COP05_04160 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D COP05_02870 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:djj03012]
D COP05_02835 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D COP05_03190 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D COP05_02770 elongation factor Ts K02357 tsf; elongation factor Ts
D COP05_08230 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D COP05_08235 fusA; elongation factor G K02355 fusA; elongation factor G
D COP05_07090 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D COP05_04225 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D COP05_04230 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D COP05_06400 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D COP05_08080 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D COP05_05105 efp; elongation factor P K02356 efp; elongation factor P
D COP05_03765 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:djj03110]
D COP05_06730 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D COP05_06555 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D COP05_02555 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D COP05_00520 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D COP05_06910 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D COP05_08895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_09220 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_06900 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D COP05_05950 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D COP05_06905 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D COP05_06735 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D COP05_03915 co-chaperone GroES K04078 groES; chaperonin GroES
D COP05_08900 co-chaperone GroES K04078 groES; chaperonin GroES
D COP05_06620 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D COP05_04250 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D COP05_03365 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D COP05_00880 serine protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D COP05_00345 hypothetical protein K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D COP05_01550 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_09620 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D COP05_10525 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D COP05_06120 thiol reductase thioredoxin K03671 TXN; thioredoxin
D COP05_04310 thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:djj04131]
D COP05_02655 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D COP05_09685 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D COP05_05285 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D COP05_08765 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D COP05_05180 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D COP05_00520 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:djj04121]
D COP05_05580 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:djj03051]
D COP05_00520 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D COP05_05570 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D COP05_05575 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D COP05_05590 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D COP05_05565 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D COP05_05520 hypothetical protein K24033 pafBC; proteasome accessory factor BC
D COP05_05585 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:djj03032]
D COP05_09195 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D COP05_01960 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D COP05_00370 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D COP05_10025 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D COP05_05860 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D COP05_00455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_04060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_10400 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D COP05_00365 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D COP05_05990 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D COP05_01615 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D COP05_04880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_08865 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_09550 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D COP05_02725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D COP05_04405 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D COP05_04945 DNA topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D COP05_00335 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D COP05_04935 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D COP05_00340 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D COP05_01630 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:djj03036]
D COP05_01960 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D COP05_04640 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D COP05_06570 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D COP05_00370 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D COP05_03770 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D COP05_03055 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D COP05_02925 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D COP05_03295 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D COP05_03095 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D COP05_03080 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D COP05_03775 cell division protein K09811 ftsX; cell division transport system permease protein
D COP05_03110 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D COP05_00405 ParA family protein K03496 parA; chromosome partitioning protein
D COP05_05340 ParA family protein K03496 parA; chromosome partitioning protein
D COP05_05385 ParA family protein K03496 parA; chromosome partitioning protein
D COP05_00410 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D COP05_10320 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D COP05_00400 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D COP05_02755 tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D COP05_01205 integrase K03733 xerC; integrase/recombinase XerC
D COP05_05335 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D COP05_07325 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D COP05_05280 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:djj03400]
D COP05_06915 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D COP05_09250 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D COP05_06545 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D COP05_01600 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D COP05_09175 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D COP05_10715 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D COP05_00895 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D COP05_04980 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D COP05_10290 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D COP05_06110 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D COP05_04645 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D COP05_07055 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D COP05_03360 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D COP05_01675 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D COP05_04405 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D COP05_05260 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D COP05_07540 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D COP05_05245 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D COP05_05265 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D COP05_08695 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D COP05_07270 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D COP05_08260 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D COP05_08060 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D COP05_05130 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D COP05_06395 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D COP05_07810 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D COP05_07815 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D COP05_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D COP05_00365 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D COP05_05990 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D COP05_01615 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D COP05_04880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_08865 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D COP05_09550 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D COP05_00455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_04060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_10400 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_02950 recA; recombinase RecA K03553 recA; recombination protein RecA
D COP05_06175 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D COP05_06170 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D COP05_06180 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D COP05_05550 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D COP05_09470 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D COP05_09475 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D COP05_00360 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D COP05_00815 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D COP05_04620 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D COP05_05910 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D COP05_09535 recombination protein RecR K06187 recR; recombination protein RecR
D COP05_06305 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D COP05_10580 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D COP05_08770 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D COP05_04945 DNA topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D COP05_00335 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D COP05_04935 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D COP05_00340 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D COP05_01630 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D COP05_03030 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D COP05_02995 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D COP05_05410 DNA repair nucleotidyltransferase K14161 imuB; protein ImuB
D COP05_05405 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D COP05_02955 hypothetical protein K03565 recX; regulatory protein
D COP05_02990 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D COP05_01790 ADP-ribose pyrophosphatase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D COP05_06275 NTP pyrophosphohydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D COP05_02250 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D COP05_07750 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D COP05_02290 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D COP05_07745 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:djj03029]
D COP05_02835 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D COP05_03190 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D COP05_02770 elongation factor Ts K02357 tsf; elongation factor Ts
D COP05_08230 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D COP05_08235 fusA; elongation factor G K02355 fusA; elongation factor G
D COP05_05920 GTPase Era K03595 era; GTPase
D COP05_03260 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D COP05_06720 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D COP05_04820 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D COP05_05875 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D COP05_01010 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D COP05_04415 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D COP05_04420 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D COP05_04410 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D COP05_00455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_04060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_10400 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D COP05_06910 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D COP05_06905 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D COP05_08895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_09220 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_03915 co-chaperone GroES K04078 groES; chaperonin GroES
D COP05_08900 co-chaperone GroES K04078 groES; chaperonin GroES
D COP05_06900 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D COP05_05950 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D COP05_04360 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D COP05_07325 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D COP05_05330 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D COP05_05045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D COP05_00390 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D COP05_00520 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:djj02000]
D COP05_00180 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D COP05_00175 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D COP05_03505 ABC transporter ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D COP05_09400 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D COP05_10470 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D COP05_10475 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D COP05_02600 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D COP05_00630 iron ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D COP05_10015 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D COP05_10155 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D COP05_04665 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D COP05_04670 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D COP05_00295 ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D COP05_06445 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D COP05_10200 ABC transporter ATP-binding protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D COP05_06505 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D COP05_06500 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D COP05_06495 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D COP05_07400 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D COP05_07385 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D COP05_06660 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D COP05_06825 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D COP05_06830 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D COP05_06835 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D COP05_10780 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D COP05_10775 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D COP05_10770 ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D COP05_09845 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D COP05_09850 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D COP05_09855 ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D COP05_08985 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D COP05_08990 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D COP05_08995 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D COP05_09650 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D COP05_09655 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D COP05_09660 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D COP05_07005 sugar ABC transporter substrate-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D COP05_07010 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D COP05_07015 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D COP05_09680 ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D COP05_09675 ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D COP05_09815 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D COP05_09805 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D COP05_09810 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D COP05_03380 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D COP05_03395 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D COP05_03385 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D COP05_06080 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D COP05_08600 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_02270 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_02320 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_00700 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_00715 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_09665 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_09705 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_07185 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_10600 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D COP05_02265 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D COP05_02325 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D COP05_09710 amino acid ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D COP05_08595 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D COP05_07195 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D COP05_10605 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D COP05_02260 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D COP05_02330 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D COP05_00710 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D COP05_09715 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D COP05_08580 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D COP05_07190 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D COP05_01795 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D COP05_01800 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D COP05_01805 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D COP05_01810 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D COP05_00555 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D COP05_00565 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D COP05_00560 ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D COP05_06930 amino acid ABC transporter amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D COP05_06925 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D COP05_06920 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D COP05_09955 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D COP05_09960 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D COP05_09385 amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D COP05_09375 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D COP05_08960 peptide ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D COP05_08965 peptide ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D COP05_08945 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D COP05_08950 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D COP05_08955 peptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D COP05_01065 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D COP05_01075 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D COP05_01060 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D COP05_01055 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D COP05_07530 iron ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D COP05_10690 iron siderophore-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D COP05_10210 iron siderophore-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D COP05_07525 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D COP05_10660 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D COP05_07520 ferrichrome ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D COP05_10220 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D COP05_10665 iron ABC transporter K23187 fepG; iron-siderophore transport system permease protein
D COP05_07515 fecE; Fe(3+)-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D COP05_10225 hypothetical protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D COP05_10670 cobalamin/Fe(3+)-siderophore ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D COP05_03185 iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D COP05_03175 enterochelin ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein
D COP05_03180 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D COP05_03170 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D COP05_10170 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D COP05_10230 iron siderophore-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D COP05_10235 iron siderophore-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D COP05_10180 hypothetical protein K02015 ABC.FEV.P; iron complex transport system permease protein
D COP05_05425 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D COP05_05880 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D COP05_05890 ABC transporter K09816 znuB; zinc transport system permease protein
D COP05_05885 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D COP05_09595 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D COP05_09605 zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D COP05_09610 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D COP05_09600 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D COP05_00645 anchored repeat-type ABC transporter permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein
D COP05_00650 anchored repeat-type ABC transporter ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D COP05_02160 BioY protein K03523 bioY; biotin transport system substrate-specific component
D COP05_00765 ECF transporter S component K16924 mtsT; energy-coupling factor transport system substrate-specific component
D COP05_00770 heme ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D COP05_06985 energy-coupling factor ABC transporter ATP-binding protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D COP05_00185 ABC transporter K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D COP05_00190 ABC transporter permease K16925 ykoE; energy-coupling factor transport system permease protein
D COP05_06975 ABC transporter permease K16925 ykoE; energy-coupling factor transport system permease protein
D COP05_03775 cell division protein K09811 ftsX; cell division transport system permease protein
D COP05_03770 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D COP05_03585 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D COP05_03940 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D COP05_00750 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D COP05_05050 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D COP05_07900 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D COP05_07300 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D COP05_00805 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_03590 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_03945 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_00755 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_05055 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_07895 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_07210 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D COP05_00005 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_00070 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_00075 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_00095 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_06945 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_08870 ABC transporter permease K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D COP05_10885 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_10890 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D COP05_00085 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D COP05_01815 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D COP05_10895 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D COP05_00100 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D COP05_05080 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D COP05_01745 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D COP05_10435 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D COP05_09925 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D COP05_00820 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D COP05_07765 chloramphenicol efflux MFS transporter Cmx K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D COP05_07600 chloramphenicol efflux MFS transporter Cmx K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D COP05_09145 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D COP05_10245 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D COP05_08825 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D COP05_06055 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D COP05_09840 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D COP05_09835 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D COP05_07085 PTS sucrose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D COP05_09830 hypothetical protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D COP05_09770 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D COP05_09765 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D COP05_09760 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D COP05_09730 PTS fructose transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D COP05_04485 PTS fructose transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D COP05_02465 PTS lactose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D COP05_09740 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D COP05_09735 PTS sugar transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D COP05_04350 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D COP05_04345 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D COP05_01180 formate transporter K06212 focA; formate transporter
D COP05_06540 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D COP05_07135 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D COP05_08160 hypothetical protein K02557 motB; chemotaxis protein MotB
D COP05_01870 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D COP05_01875 hypothetical protein K06199 crcB; fluoride exporter
D COP05_04150 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D COP05_04145 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D COP05_08815 putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D COP05_00040 amino acid ABC transporter permease K16238 eat; ethanolamine permease
D COP05_10855 amino acid ABC transporter permease K16238 eat; ethanolamine permease
D COP05_00920 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D COP05_07430 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D COP05_10275 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D COP05_00890 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D COP05_08615 permease DsdX K13629 dsdX; D-serine transporter
D COP05_06855 transporter K05020 opuD; glycine betaine transporter
D COP05_07145 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D COP05_10490 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D COP05_10495 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D COP05_00605 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D COP05_03925 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D COP05_08510 potassium transporter Trk K03498 trkH; trk/ktr system potassium uptake protein
D COP05_08515 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D COP05_05000 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D COP05_05005 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D COP05_00025 cytosine permease K10974 codB; cytosine permease
D COP05_10840 cytosine permease K10974 codB; cytosine permease
D COP05_06355 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D COP05_04650 chromate transporter K07240 chrA; chromate transporter
D COP05_07615 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D COP05_10710 divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D COP05_09030 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D COP05_00260 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D COP05_02110 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D COP05_02115 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D COP05_02120 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D COP05_02125 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D COP05_02130 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D COP05_02135 sodium:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D COP05_00430 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D COP05_06285 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D COP05_06705 permease K13936 mdcF; malonate transporter and related proteins
D COP05_07440 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D COP05_00940 branched-chain amino acid transporter AzlC K26605 azlC; branched chain amino acid efflux pump
D COP05_00945 branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D COP05_07890 AI-2E family transporter K20469 K20469; putative heme transporter
D COP05_05400 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D COP05_10545 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D COP05_03080 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D COP05_01905 hypothetical protein K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D COP05_08465 cytochrome C biogenesis protein ResC K06196 ccdA; cytochrome c-type biogenesis protein
D COP05_08705 hypothetical protein K20468 K20468; putative heme transporter
D COP05_00720 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D COP05_00725 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D COP05_08550 hypothetical protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:djj02044]
D COP05_05625 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D COP05_03730 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D COP05_01660 secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D COP05_03735 type II secretion system protein F K12510 tadB; tight adherence protein B
D COP05_01655 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D COP05_03740 pilus assembly protein TadB K12511 tadC; tight adherence protein C
D COP05_03115 YggT family protein K02221 yggT; YggT family protein
D COP05_06010 competence protein ComEA K02237 comEA; competence protein ComEA
D COP05_06005 competence protein ComEC K02238 comEC; competence protein ComEC
D COP05_10395 type VI secretion protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D COP05_06160 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D COP05_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D COP05_06155 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D COP05_08095 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D COP05_02670 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D COP05_02665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D COP05_06165 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D COP05_00390 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D COP05_05515 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D COP05_07330 translocase K03117 tatB; sec-independent protein translocase protein TatB
D COP05_05510 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:djj02042]
D COP05_04150 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D COP05_04145 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D COP05_07865 hemolysin III family channel protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:djj02022]
D COP05_02490 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D COP05_02495 DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D COP05_02385 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D COP05_03640 two-component sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D COP05_03635 DNA-binding response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D COP05_09190 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D COP05_08150 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D COP05_09185 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D COP05_03935 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D COP05_00745 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D COP05_03930 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D COP05_00740 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D COP05_04660 two-component sensor histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D COP05_04655 DNA-binding response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D COP05_03705 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D COP05_05190 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:djj02035]
D COP05_08160 hypothetical protein K02557 motB; chemotaxis protein MotB
D COP05_06930 amino acid ABC transporter amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D COP05_05625 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D COP05_03730 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D COP05_01660 secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:djj04812]
D COP05_00405 ParA family protein K03496 parA; chromosome partitioning protein
D COP05_05340 ParA family protein K03496 parA; chromosome partitioning protein
D COP05_05385 ParA family protein K03496 parA; chromosome partitioning protein
D COP05_00410 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D COP05_10320 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:djj04147]
D COP05_00520 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D COP05_06385 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D COP05_05285 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D COP05_05290 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D COP05_05180 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D COP05_10525 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D COP05_08895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_09220 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D COP05_06910 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D COP05_07420 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D COP05_07170 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D COP05_08860 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D COP05_08875 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D COP05_08230 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D COP05_05940 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D COP05_07640 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D COP05_06205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D COP05_06745 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_01690 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_04885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D COP05_08090 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D COP05_06150 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D COP05_03255 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D COP05_03250 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D COP05_08440 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D COP05_08340 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D COP05_04315 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D COP05_00860 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D COP05_00045 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05720 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_05735 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_10860 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D COP05_01430 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D COP05_08370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D COP05_05315 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D COP05_05295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_09745 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D COP05_08765 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:djj02048]
D COP05_04195 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D COP05_04190 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D COP05_04185 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D COP05_07785 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D COP05_01960 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D COP05_02355 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D COP05_02350 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D COP05_00140 restriction endonuclease K07448 mrr; restriction system protein
D COP05_02310 mRNA interferase MazF3 K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D COP05_02305 hypothetical protein K26983 mazE3; antitoxin MazE3
D COP05_07560 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D COP05_07650 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D COP05_07565 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D COP05_07645 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D COP05_07720 PIN domain-containing protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D COP05_07725 toxin-antitoxin system K21495 fitA; antitoxin FitA
D COP05_04510 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_10540 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D COP05_04360 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:djj01504]
D COP05_00605 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D COP05_07550 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D COP05_00295 ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D COP05_07265 aminoglycoside phosphotransferase K06979 mph; macrolide phosphotransferase
D COP05_07765 chloramphenicol efflux MFS transporter Cmx K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D COP05_07600 chloramphenicol efflux MFS transporter Cmx K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D COP05_08825 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D COP05_06055 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D COP05_07620 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:djj03100]
D COP05_10430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D COP05_00310 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D COP05_04740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D COP05_01335 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_04165 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_08560 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_04055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D COP05_05840 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D COP05_02150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D COP05_06220 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D COP05_04545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D COP05_06420 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D COP05_04550 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D COP05_02210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D COP05_06225 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_02095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_02525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_06235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D COP05_04025 tRNA-His K14226 tRNA-His; tRNA His
D COP05_00315 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D COP05_09155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_03905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_05185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_00485 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_05630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D COP05_03955 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D COP05_08805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D COP05_02415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D COP05_04075 tRNA-Met K14230 tRNA-Met; tRNA Met
D COP05_03325 tRNA-Met K14230 tRNA-Met; tRNA Met
D COP05_05835 tRNA-Met K14230 tRNA-Met; tRNA Met
D COP05_02145 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D COP05_01560 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D COP05_02530 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D COP05_05370 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D COP05_09585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_01135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_01170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_09940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D COP05_03320 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D COP05_09270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D COP05_02200 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D COP05_08325 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D COP05_03315 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D COP05_06215 tRNA-Val K14237 tRNA-Val; tRNA Val
D COP05_05790 tRNA-Val K14237 tRNA-Val; tRNA Val
D COP05_06230 tRNA-Val K14237 tRNA-Val; tRNA Val
D COP05_07100 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D COP05_03265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_06345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_09910 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D COP05_03270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_06340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_09905 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D COP05_03275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_06335 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_03280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_09900 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D COP05_09570 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D COP05_05760 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D COP05_03790 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D COP05_03230 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D COP05_10510 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D COP05_06020 nucleoside-diphosphate sugar epimerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D COP05_09390 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D COP05_02450 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D COP05_09075 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D COP05_06260 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D COP05_03370 peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D COP05_01140 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D COP05_07445 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D COP05_09305 pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D COP05_08785 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D COP05_08000 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D COP05_05495 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D COP05_09055 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D COP05_05175 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D COP05_05730 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D COP05_00265 low molecular weight phosphatase family protein K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D COP05_00635 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D COP05_10455 esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D COP05_07140 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D COP05_04735 fructose 1,6-bisphosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D COP05_07305 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D COP05_05450 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D COP05_06455 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D COP05_04295 endonuclease K07503 nucS; endonuclease [EC:3.1.-.-]
D COP05_01225 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D COP05_06655 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D COP05_05850 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D COP05_04080 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D COP05_07875 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D COP05_04385 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D COP05_04330 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D COP05_06025 acyl-CoA synthetase K25044 oleBC; cis-3-alkyl-4-acyloxetan-2-one decarboxylase / olefin beta-lactone synthetase [EC:4.1.1.114 6.1.3.1]
D COP05_10555 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D COP05_04035 N-acyl-D-glucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D COP05_00035 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D COP05_06875 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D COP05_10850 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D COP05_07635 cadA; cadmium-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D COP05_09790 sulfurtransferase FdhD K02379 fdhD; FdhD protein
D COP05_05780 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D COP05_02245 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D COP05_07755 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D COP05_09150 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D COP05_00570 N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D COP05_08250 septal ring lytic transglycosylase RlpA family protein K21688 rpfB; resuscitation-promoting factor RpfB
D COP05_03555 glycosyl transferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D COP05_01605 cold-shock protein K03704 cspA; cold shock protein
D COP05_03015 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D COP05_03865 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D COP05_02535 trigger factor K03545 tig; trigger factor
D COP05_03785 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D COP05_02240 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D COP05_02740 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D COP05_08460 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D COP05_00730 hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D COP05_07795 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D COP05_02735 hypothetical protein K07460 yraN; putative endonuclease
D COP05_02745 DNA processing protein DprA K04096 smf; DNA processing protein
D COP05_05665 AAA family ATPase K07478 ycaJ; putative ATPase
D COP05_10740 IS30 family transposase K07482 K07482; transposase, IS30 family
D COP05_00825 IS30 family transposase K07482 K07482; transposase, IS30 family
D COP05_01915 hypothetical protein K07483 K07483; transposase
D COP05_07680 helix-turn-helix domain-containing protein K07483 K07483; transposase
D COP05_00170 IS256 family transposase K07493 K07493; putative transposase
D COP05_07775 hypothetical protein K07497 K07497; putative transposase
D COP05_07780 hypothetical protein K07497 K07497; putative transposase
D COP05_05830 hypothetical protein K07497 K07497; putative transposase
D COP05_07685 IS3 family transposase K07497 K07497; putative transposase
D COP05_07730 hypothetical protein K07497 K07497; putative transposase
D COP05_07760 hypothetical protein K07497 K07497; putative transposase
D COP05_09090 IS3 family transposase K07497 K07497; putative transposase
D COP05_09435 hypothetical protein K07497 K07497; putative transposase
D COP05_10630 IS3 family transposase K07497 K07497; putative transposase
D COP05_10645 hypothetical protein K07497 K07497; putative transposase
D COP05_10655 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D COP05_04805 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D COP05_08300 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D COP05_07485 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D COP05_09340 hypothetical protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D COP05_09575 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D COP05_04425 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D COP05_04430 amino acid transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D COP05_00675 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D COP05_07955 hypothetical protein K07085 K07085; putative transport protein
C 99978 Cell growth
D COP05_00395 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
D COP05_02090 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D COP05_10100 DNA invertase Pin K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D COP05_07415 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D COP05_05935 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D COP05_07855 ribonuclease K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D COP05_00500 lysozyme K07273 acm; lysozyme
D COP05_03545 DUF2304 domain-containing protein K09153 K09153; small membrane protein
C 99994 Others
D COP05_02485 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D COP05_07050 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D COP05_01640 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D COP05_07225 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D COP05_05065 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D COP05_05070 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D COP05_03725 hypothetical protein K07058 K07058; membrane protein
D COP05_05485 hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D COP05_05395 rhodanese domain-containing protein K07146 K07146; UPF0176 protein
D COP05_03900 histidine phosphatase family protein K15640 K15640; uncharacterized phosphatase
D COP05_10675 DedA family protein K03975 dedA; membrane-associated protein
D COP05_00525 hypothetical protein K01421 yhgE; putative membrane protein
D COP05_06590 hypothetical protein K08981 K08981; putative membrane protein
D COP05_01735 hypothetical protein K08996 yagU; putative membrane protein
C 99997 Function unknown
D COP05_06990 hypothetical protein K06867 K06867; uncharacterized protein
D COP05_02685 hypothetical protein K06960 K06960; uncharacterized protein
D COP05_10030 N-acetyltransferase K06975 K06975; uncharacterized protein
D COP05_02805 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D COP05_04800 peptidase S15 K06978 K06978; uncharacterized protein
D COP05_07470 hypothetical protein K07003 K07003; uncharacterized protein
D COP05_01685 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D COP05_00600 permease K07090 K07090; uncharacterized protein
D COP05_05995 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D COP05_01565 metallophosphoesterase K07098 K07098; uncharacterized protein
D COP05_07465 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D COP05_10280 NADH-flavin reductase K07118 K07118; uncharacterized protein
D COP05_01190 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D COP05_01680 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D COP05_00305 hypothetical protein K07133 K07133; uncharacterized protein
D COP05_07740 ATPase K07133 K07133; uncharacterized protein
D COP05_00385 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D COP05_06375 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D COP05_04070 hypothetical protein K09118 K09118; uncharacterized protein
D COP05_06595 hypothetical protein K09167 K09167; uncharacterized protein
D COP05_09700 metal-independent alpha-mannosidase K09704 K09704; uncharacterized protein
D COP05_07460 ABC transporter K09781 K09781; uncharacterized protein
D COP05_09465 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D COP05_05765 hypothetical protein K09861 K09861; uncharacterized protein
D COP05_06485 hypothetical protein K09940 K09940; uncharacterized protein
D COP05_00290 hypothetical protein K05937 K05937; uncharacterized protein
D COP05_02830 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024