+D GENES KO #

  KEGG Orthology (KO) - Dokdonella koreensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dko00010] D I596_2693 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D I596_773 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D I596_284 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D I596_2494 Fructose-1,6-bisphosphatase class 1 K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_2498 Fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D I596_1336 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D I596_837 Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D I596_898 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D I596_452 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D I596_1659 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D I596_961 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D I596_1874 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D I596_2953 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D I596_1432 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D I596_1749 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D I596_663 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D I596_1067 Methanol dehydrogenase large subunit protein K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7] D I596_1064 Methanol dehydrogenase, small subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7] D I596_887 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D I596_983 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_2341 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:dko00020] D I596_2679 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D I596_716 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D I596_721 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D I596_1638 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_1642 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_3302 Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D I596_2711 Isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D I596_3128 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D I596_3129 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_2046 Succinyl-CoA ligase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D I596_2047 Succinyl-CoA ligase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D I596_3154 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D I596_3153 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D I596_3156 Succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D I596_3155 Succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D I596_2548 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D I596_2341 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D I596_2953 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D I596_1432 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:dko00030] D I596_2693 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D I596_1577 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D I596_2499 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D I596_2496 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D I596_847 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D I596_966 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D I596_1167 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_2653 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D I596_930 Quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D I596_1672 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_2498 Fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D I596_284 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D I596_2494 Fructose-1,6-bisphosphatase class 1 K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D I596_773 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:dko00040] D I596_1181 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D I596_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D I596_1577 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D I596_2499 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:dko00051] D I596_3140 Mannose-6-phosphate isomerase, type 2 K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_3630 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D I596_1184 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D I596_773 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D I596_284 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D I596_2494 Fructose-1,6-bisphosphatase class 1 K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_2498 Fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D I596_1336 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D I596_1680 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:dko00052] D I596_3703 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D I596_1125 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D I596_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_773 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:dko00053] D I596_1181 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D I596_1119 Capsular polysaccharide biosynthesis protein I K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:dko00500] D I596_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D I596_2957 Alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D I596_2959 HAD-superfamily hydrolase, subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_2693 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dko00520] D I596_504 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D I596_3042 Glutamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D I596_1334 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D I596_581 Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D I596_3670 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D I596_2146 Phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D I596_1855 Aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D I596_1854 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D I596_1692 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D I596_1118 UDP-glucose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D I596_1181 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D I596_3703 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D I596_1125 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D I596_1119 Capsular polysaccharide biosynthesis protein I K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D I596_1680 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D I596_2693 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D I596_3140 Mannose-6-phosphate isomerase, type 2 K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D I596_3630 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D I596_1184 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] C 00620 Pyruvate metabolism [PATH:dko00620] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D I596_2953 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D I596_1432 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1749 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D I596_663 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D I596_1067 Methanol dehydrogenase large subunit protein K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7] D I596_1064 Methanol dehydrogenase, small subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7] D I596_887 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D I596_961 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D I596_905 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D I596_401 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D I596_402 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D I596_1964 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D I596_2664 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D I596_983 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D I596_889 Lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D I596_1674 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D I596_2129 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D I596_1672 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D I596_2947 Bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D I596_2548 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D I596_2920 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D I596_2341 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D I596_1874 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D I596_84 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_125 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dko00630] D I596_83 Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D I596_84 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D I596_2679 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D I596_716 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D I596_721 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D I596_1638 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_1642 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1189 3-oxoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D I596_1192 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D I596_186 Catalase K03781 katE; catalase [EC:1.11.1.6] D I596_2307 Catalase K03781 katE; catalase [EC:1.11.1.6] D I596_1672 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D I596_899 HAD-superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D I596_2497 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D I596_2491 Ribulose bisphosphate carboxylase large chain CbbL K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D I596_2492 Ribulose bisphosphate carboxylase small chain CbbS K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D I596_1563 Alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D I596_3683 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D I596_630 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D I596_710 Glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D I596_3359 Glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D I596_708 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_709 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D I596_699 D-glycerate 3-kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D I596_889 Lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D I596_212 Formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D I596_1992 Formate dehydrogenase O, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D I596_1993 Formate dehydrogenase O, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D I596_207 Formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D I596_1991 Formate dehydrogenase O, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D I596_206 NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D I596_1990 Formate dehydrogenase O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D I596_205 Formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D I596_1813 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:dko00640] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D I596_712 Acetyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D I596_868 Pyruvate dehydrogenase E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D I596_867 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D I596_3224 Transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D I596_866 Branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1196 Putative quinone oxidoreductase, YhdH/YhfP family protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_905 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D I596_401 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D I596_402 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D I596_1964 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D I596_2047 Succinyl-CoA ligase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D I596_2046 Succinyl-CoA ligase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D I596_1018 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D I596_721 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D I596_3014 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D I596_1642 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_718 Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:dko00650] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1378 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_2758 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D I596_2167 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D I596_2422 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D I596_2423 PHA synthase subunit K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE D I596_2233 Polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D I596_1189 3-oxoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D I596_1192 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D I596_3154 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D I596_3153 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D I596_3156 Succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D I596_3155 Succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D I596_1915 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D I596_2211 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D I596_3037 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A / Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D I596_3702 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D I596_529 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D I596_14 Putative D-3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22] D I596_118 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D I596_117 Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:dko00660] D I596_118 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D I596_117 Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D I596_2047 Succinyl-CoA ligase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D I596_2046 Succinyl-CoA ligase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D I596_123 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D I596_2202 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D I596_122 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D I596_2201 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D I596_121 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dko00562] D I596_3012 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D I596_3254 Putative phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D I596_1018 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D I596_1336 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dko00190] D I596_1339 NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D I596_1340 NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D I596_1341 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D I596_1342 NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D I596_1343 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D I596_1345 NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D I596_1346 NADH-ubiquinone oxidoreductase chainG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D I596_1347 NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D I596_1348 NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D I596_1349 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D I596_1350 NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D I596_1351 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D I596_1352 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D I596_1353 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D I596_3651 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D I596_3154 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D I596_3153 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D I596_3156 Succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D I596_3155 Succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D I596_2392 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D I596_2393 Ubiquinol-cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D I596_2394 Ubiquinol-cytochrome c reductase, cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D I596_3095 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D I596_3090 Cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D I596_3087 Cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D I596_3086 Cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D I596_3089 Putative cytochrome c oxidase assembly protein ctag/cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D I596_3094 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D I596_2389 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D I596_2388 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D I596_2387 Hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D I596_2386 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D I596_838 Cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D I596_839 Cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D I596_576 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D I596_578 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D I596_577 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D I596_575 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D I596_579 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D I596_572 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D I596_574 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D I596_573 F0F1 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D I596_1156 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D I596_2718 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D I596_2663 Transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:dko00710] D I596_2491 Ribulose bisphosphate carboxylase large chain CbbL K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D I596_2492 Ribulose bisphosphate carboxylase small chain CbbS K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D I596_898 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D I596_837 Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_2498 Fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D I596_284 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D I596_2494 Fructose-1,6-bisphosphatase class 1 K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D I596_2496 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D I596_847 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D I596_966 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D I596_2495 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D I596_1336 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D I596_1577 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D I596_2499 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D I596_2920 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D I596_2947 Bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:dko00720] D I596_1874 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D I596_2920 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D I596_2548 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D I596_3154 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D I596_3153 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D I596_3156 Succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D I596_3155 Succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D I596_2046 Succinyl-CoA ligase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D I596_2047 Succinyl-CoA ligase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_3302 Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D I596_1638 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_1642 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D I596_905 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D I596_401 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D I596_402 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D I596_1964 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D I596_1399 Methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D I596_946 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:dko00680] D I596_1067 Methanol dehydrogenase large subunit protein K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7] D I596_1066 MxaJ, protein involved in methanol oxidation K16254 mxaJ; mxaJ protein D I596_1065 Cytochrome c-L precursor K16255 mxaG; cytochrome c-L D I596_1064 Methanol dehydrogenase, small subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7] D I596_1061 MxaA protein K16256 mxaA; mxaA protein D I596_1060 MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase K16257 mxaC; mxaC protein D I596_1059 MxaK protein K16258 mxaK; mxaK protein D I596_1058 MxaL protein K16259 mxaL; mxaL protein D I596_1057 MxaD protein K16260 mxaD; mxaD protein D I596_1053 Methanol dehydrogenase large subunit protein K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D I596_2122 Glutathione-dependent formaldehyde-activating enzyme K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D I596_2683 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D I596_1992 Formate dehydrogenase O, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D I596_1993 Formate dehydrogenase O, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D I596_207 Formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D I596_1991 Formate dehydrogenase O, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D I596_206 NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D I596_1990 Formate dehydrogenase O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D I596_205 Formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D I596_212 Formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D I596_630 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D I596_1563 Alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D I596_1659 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D I596_2920 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_2498 Fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D I596_284 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D I596_2494 Fructose-1,6-bisphosphatase class 1 K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D I596_773 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D I596_1874 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D I596_452 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D I596_1571 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D I596_1702 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:dko00910] D I596_2865 Periplasmic nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D I596_2864 Nitrate reductase cytochrome c550-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D I596_3545 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D I596_3317 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D I596_3683 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D I596_2119 Glutamate synthase, large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D I596_2120 Glutamate synthase, small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D I596_1514 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dko00920] D I596_1474 Sulfate ABC transporter, periplasmic sulfate-binding protein, CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D I596_1472 Sulfate ABC transporter, periplasmic sulfate-binding protein, CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D I596_1473 Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D I596_1475 Sulfate ABC transporter, inner membrane subunit, CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D I596_1476 Sulfate ABC transporter, ATPase subunit, CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D I596_3355 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D I596_3356 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D I596_1565 Adenylylsulfate kinase ApsK K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D I596_2771 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D I596_1566 Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D I596_517 Anaerobic dimethyl sulfoxide reductase chain A K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D I596_518 Anaerobic dimethyl sulfoxide reductase chain B K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D I596_520 Anaerobic dimethyl sulfoxide reductase chain C K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D I596_1868 Flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D I596_1568 Sulfite reductase, flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D I596_1567 Sulfite reductase, hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D I596_2762 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D I596_1542 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D I596_1736 Cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D I596_2159 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D I596_735 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D I596_736 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D I596_1481 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dko00061] D I596_905 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D I596_401 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D I596_402 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D I596_1964 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D I596_3378 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_3379 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_2279 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_2281 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D I596_2283 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D I596_3391 3-oxoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D I596_1300 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D I596_3394 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D I596_2278 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D I596_1601 Dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_3393 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_2280 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_1301 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D I596_912 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D I596_2167 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D I596_1636 Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_1146 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dko00071] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1377 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_1378 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D I596_2338 Acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D I596_3228 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D I596_1636 Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_1146 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D I596_1749 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis D I596_3378 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_3379 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_2279 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_2281 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dko00561] D I596_699 D-glycerate 3-kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D I596_663 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D I596_3729 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D I596_3358 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D I596_362 Acylglycerol lipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D I596_2961 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00564 Glycerophospholipid metabolism [PATH:dko00564] D I596_3746 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D I596_3729 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D I596_3358 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D I596_3638 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D I596_2788 Phospholipid N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D I596_1427 Phospholipid N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D I596_1495 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D I596_918 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D I596_216 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D I596_2936 Phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D I596_1668 Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D I596_1446 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D I596_638 Phosphatidylglycerophosphatase A-like protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D I596_897 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D I596_1455 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D I596_1540 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D I596_132 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] D I596_1851 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D I596_878 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase D I596_877 Methyltransferase type 12 domain-containing protein K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase C 00565 Ether lipid metabolism [PATH:dko00565] D I596_3638 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism [PATH:dko00590] D I596_3638 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D I596_3443 Aminopeptidase N K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism [PATH:dko00591] D I596_3638 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D I596_2530 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] C 00592 alpha-Linolenic acid metabolism [PATH:dko00592] D I596_3638 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D I596_1377 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:dko01040] D I596_3431 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D I596_470 Acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D I596_1422 Acyl-CoA thiolesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dko00230] D I596_1932 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D I596_2772 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_2653 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D I596_3185 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D I596_411 Phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D I596_1848 Phosphoribosylformylglycinamidine synthase, clade II K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D I596_1419 Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D I596_749 Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D I596_1849 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D I596_3249 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D I596_3248 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D I596_1575 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D I596_2550 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D I596_432 Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D I596_1589 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D I596_2099 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D I596_1174 Multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D I596_505 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D I596_1405 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D I596_1380 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D I596_1009 Nucleoside 5-triphosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D I596_1407 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D I596_3469 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D I596_1006 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D I596_446 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D I596_2898 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D I596_445 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D I596_2674 RelA/SpoT family (P)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D I596_2719 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D I596_3101 RelA/SpoT family (P)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D I596_503 Hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D I596_409 Adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D I596_1978 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D I596_2775 Sugar kinase, ribokinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D I596_144 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D I596_1366 Putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D I596_1329 5'-nucleotidase domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D I596_772 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D I596_2770 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D I596_1595 Diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D I596_3355 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D I596_3356 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D I596_1565 Adenylylsulfate kinase ApsK K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:dko00240] D I596_1625 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D I596_1623 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D I596_801 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D I596_1331 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D I596_614 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D I596_3662 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D I596_627 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D I596_1944 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D I596_1380 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D I596_2770 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D I596_1930 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D I596_1656 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D I596_1707 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D I596_1589 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D I596_2099 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D I596_1329 5'-nucleotidase domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D I596_1366 Putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D I596_2316 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D I596_446 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D I596_2898 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D I596_445 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D I596_2274 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D I596_3659 Deoxyuridine 5''''-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D I596_33 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D I596_1592 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dko00250] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_2671 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D I596_471 Peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D I596_1144 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D I596_1471 Putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D I596_3793 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D I596_1563 Alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D I596_1821 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D I596_2175 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D I596_2170 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D I596_1978 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D I596_2550 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D I596_801 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D I596_2119 Glutamate synthase, large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D I596_2120 Glutamate synthase, small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D I596_3317 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D I596_3085 Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D I596_3683 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D I596_1625 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D I596_1623 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D I596_3042 Glutamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D I596_3185 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dko00260] D I596_2408 Bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_825 Aspartokinase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_818 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D I596_1958 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D I596_2407 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D I596_2406 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D I596_26 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D I596_630 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D I596_1563 Alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D I596_1672 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D I596_452 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D I596_699 D-glycerate 3-kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D I596_1571 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D I596_1702 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D I596_2038 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D I596_1969 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D I596_710 Glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D I596_3359 Glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D I596_708 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_709 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D I596_2936 Phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D I596_69 Cysteine synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D I596_3785 Cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D I596_2358 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D I596_3708 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D I596_3463 Putative pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D I596_1963 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D I596_1962 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dko00270] D I596_1542 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D I596_1736 Cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D I596_3785 Cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D I596_69 Cysteine synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D I596_3346 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_3348 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_444 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D I596_1079 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D I596_2257 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D I596_3459 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D I596_1174 Multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D I596_2148 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D I596_506 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D I596_964 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D I596_1906 Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D I596_1902 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D I596_1905 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D I596_3126 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D I596_1205 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D I596_949 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D I596_2408 Bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_825 Aspartokinase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_818 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D I596_1958 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D I596_2407 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D I596_2159 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D I596_735 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D I596_736 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D I596_944 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_124 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_2923 Glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D I596_797 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_2762 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D I596_3073 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D I596_2358 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D I596_1571 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D I596_1702 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:dko00280] D I596_944 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_124 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_1169 Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D I596_868 Pyruvate dehydrogenase E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D I596_867 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D I596_3224 Transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D I596_866 Branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1166 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_1377 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D I596_1022 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D I596_3457 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D I596_1018 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D I596_1916 Carbamoyl-phosphate synthase L chain ATP-binding protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D I596_1160 Methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D I596_1918 Enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D I596_1915 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D I596_2211 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D I596_3037 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A / Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D I596_3702 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dko00290] D I596_3708 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D I596_3463 Putative pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D I596_123 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D I596_2202 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D I596_122 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D I596_2201 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D I596_121 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D I596_118 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D I596_117 Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D I596_119 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D I596_120 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D I596_944 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_124 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_1169 Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D I596_3793 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D I596_125 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dko00300] D I596_2408 Bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_825 Aspartokinase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_818 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D I596_1958 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D I596_2702 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D I596_1727 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D I596_1949 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D I596_849 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D I596_1951 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D I596_689 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D I596_549 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D I596_550 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:dko00310] D I596_617 Aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D I596_3129 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_3228 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:dko00220] D I596_2178 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9] D I596_2175 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D I596_2170 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D I596_2931 Arginase K01476 rocF; arginase [EC:3.5.3.1] D I596_603 Putative N-Dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27] D I596_3683 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D I596_1625 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D I596_1623 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D I596_3317 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_3793 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D I596_2173 Acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8] D I596_2171 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D I596_849 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D I596_2174 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:dko00330] D I596_2206 Hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D I596_2205 Hydantoin utilization protein B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D I596_3458 Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D I596_901 Peptidylarginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D I596_903 Porphyromonas-type peptidyl-arginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D I596_1791 Putative amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D I596_3459 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D I596_2257 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D I596_603 Putative N-Dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27] D I596_2931 Arginase K01476 rocF; arginase [EC:3.5.3.1] D I596_705 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D I596_3085 Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D I596_973 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D I596_974 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D I596_3137 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D I596_3197 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:dko00340] D I596_3474 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D I596_3481 Phosphoribosyl-AMP cyclohydrolase / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D I596_3479 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D I596_3478 Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D I596_3480 Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D I596_3477 Imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D I596_1704 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3476 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_824 Inositol monophosphatase/fructose-1,6-bisphosphatase family protein K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D I596_3475 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D I596_1898 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D I596_3384 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D I596_1372 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D I596_1468 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D I596_1469 Formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D I596_1813 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00350 Tyrosine metabolism [PATH:dko00350] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_1704 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3476 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_872 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D I596_873 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D I596_875 Maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D I596_874 Fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D I596_1749 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D I596_1099 Fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:dko00360] D I596_3495 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_1704 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3476 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_872 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D I596_991 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D I596_1872 Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component C 00380 Tryptophan metabolism [PATH:dko00380] D I596_869 Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D I596_647 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9] D I596_654 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D I596_659 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D I596_656 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] D I596_481 2-aminomuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D I596_660 2-aminomuconate deaminase K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5] D I596_3129 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_3228 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_186 Catalase K03781 katE; catalase [EC:1.11.1.6] D I596_2307 Catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dko00400] D I596_2601 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D I596_566 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D I596_400 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D I596_3419 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D I596_567 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D I596_1671 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D I596_1583 Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D I596_2263 Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D I596_2262 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D I596_1961 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D I596_2261 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D I596_1963 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D I596_1962 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D I596_1703 Chorismate mutase I / Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_1704 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3476 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3495 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D I596_56 Pteridine-dependent deoxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dko00410] D I596_2694 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D I596_2695 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_1018 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:dko00430] D I596_1796 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_3734 Gamma-glutamyltransferase 2 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_1821 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D I596_3317 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:dko00450] D I596_736 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D I596_3346 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_3348 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_444 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D I596_3785 Cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D I596_1861 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D I596_1820 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D I596_3355 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D I596_3356 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D I596_1565 Adenylylsulfate kinase ApsK K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D I596_1985 Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D I596_1988 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D I596_2764 Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:dko00460] D I596_1796 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_3734 Gamma-glutamyltransferase 2 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_2671 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D I596_471 Peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D I596_630 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dko00470] D I596_1610 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D I596_555 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D I596_689 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D I596_818 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D I596_991 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:dko00480] D I596_1796 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_3734 Gamma-glutamyltransferase 2 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_1025 Cation transport protein ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D I596_2465 UPF0271 protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D I596_810 Carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D I596_2923 Glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D I596_797 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D I596_2902 Peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D I596_3218 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D I596_3461 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D I596_2962 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1223 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1249 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1564 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_2557 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_3226 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1157 Glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D I596_3302 Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D I596_2011 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D I596_2237 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D I596_2052 Peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D I596_3459 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D I596_1643 Putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:dko00540] D I596_911 Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D I596_559 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D I596_913 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D I596_863 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D I596_910 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D I596_3059 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D I596_1690 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D I596_1657 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D I596_1689 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D I596_1442 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D I596_2436 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D I596_2435 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D I596_535 Lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D I596_893 Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D I596_2754 Inner membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D I596_1882 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dko00541] D I596_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D I596_3703 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D I596_1125 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D I596_1181 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D I596_1119 Capsular polysaccharide biosynthesis protein I K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D I596_3143 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D I596_3060 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D I596_3142 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D I596_3141 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D I596_3140 Mannose-6-phosphate isomerase, type 2 K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D I596_3630 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D I596_1184 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D I596_581 Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D I596_1118 UDP-glucose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:dko00550] D I596_1692 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D I596_554 UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D I596_815 UDP-N-acetylmuramoylalanine-D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53] D I596_816 Hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23] D I596_549 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D I596_555 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D I596_550 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D I596_919 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D I596_3682 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D I596_2577 Hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D I596_551 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D I596_553 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D I596_1676 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D I596_2115 Penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D I596_3026 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D I596_1695 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D I596_2783 Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D I596_548 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D I596_3065 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D I596_1831 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D I596_2231 D-alanyl-D-alanine carboxypeptidase family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:dko00552] D I596_3682 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D I596_2577 Hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D I596_2961 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dko00730] D I596_951 Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D I596_2708 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D I596_743 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D I596_923 Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D I596_851 Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D I596_637 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D I596_3794 Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D I596_1158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_3493 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_772 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dko00740] D I596_634 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D I596_632 Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D I596_2901 Hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D I596_635 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D I596_633 Riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D I596_2329 Riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D I596_1932 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:dko00750] D I596_700 Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D I596_2873 Pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D I596_262 Aldo-keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D I596_1702 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D I596_1599 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D I596_3812 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D I596_2406 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:dko00760] D I596_3055 Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D I596_1589 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D I596_2099 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D I596_1999 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D I596_2770 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D I596_3324 Zn-finger containing NTP pyrophosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D I596_1147 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D I596_2039 Glutamine-dependent NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D I596_2297 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D I596_3318 Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D I596_1936 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D I596_1937 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D I596_1938 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D I596_2204 N-carbamoylsarcosine amidase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] C 00770 Pantothenate and CoA biosynthesis [PATH:dko00770] D I596_118 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D I596_117 Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D I596_119 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D I596_120 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D I596_2696 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D I596_3753 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D I596_2695 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D I596_29 Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D I596_3449 Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D I596_2770 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D I596_1799 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D I596_564 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D I596_3808 Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D I596_173 Hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D I596_944 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_124 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_2694 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:dko00780] D I596_3647 Biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D I596_3391 3-oxoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D I596_1300 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D I596_3394 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D I596_2278 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D I596_1601 Dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_3393 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_2280 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_912 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D I596_3648 Biotin synthesis protein BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D I596_3650 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D I596_2746 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D I596_3123 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D I596_3652 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D I596_30 Biotin operon repressor / Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:dko00785] D I596_3063 Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D I596_3062 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_2953 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D I596_1432 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D I596_3128 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D I596_3129 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D I596_868 Pyruvate dehydrogenase E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D I596_867 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D I596_3224 Transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D I596_866 Branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D I596_710 Glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D I596_3359 Glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D I596_708 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D I596_709 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dko00790] D I596_3233 GTP cyclohydrolase I, type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D I596_1570 GTP cyclohydrolase I, type 2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D I596_1158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_3493 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_2414 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D I596_2697 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D I596_2415 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D I596_2090 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D I596_1593 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D I596_3188 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D I596_634 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D I596_2277 Para-aminobenzoate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D I596_2276 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D I596_2403 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D I596_2592 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D I596_3495 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D I596_2416 Short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33] D I596_2988 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D I596_2989 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D I596_3440 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D I596_1884 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D I596_1885 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D I596_1887 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D I596_2662 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D I596_1388 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D I596_3033 Putative MobA-like protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D I596_1387 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dko00670] D I596_1593 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D I596_1399 Methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D I596_630 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D I596_1848 Phosphoribosylformylglycinamidine synthase, clade II K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D I596_432 Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D I596_464 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D I596_708 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D I596_3346 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_3348 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_1592 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D I596_946 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D I596_968 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dko00860] D I596_1458 Glutamate-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D I596_2659 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D I596_850 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D I596_3420 Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D I596_522 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D I596_45 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D I596_2368 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D I596_3371 Coproporphyrinogen-III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D I596_2373 Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D I596_3328 Putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D I596_3723 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D I596_44 Uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D I596_1544 Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D I596_3095 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D I596_3094 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D I596_2157 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D I596_953 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D I596_3332 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dko00130] D I596_56 Pteridine-dependent deoxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D I596_3656 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D I596_2153 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D I596_2147 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D I596_2154 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D I596_2411 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D I596_2256 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D I596_41 Uncharacterized protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D I596_2667 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D I596_678 Flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D I596_93 Putative nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D I596_872 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dko00900] D I596_743 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D I596_917 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D I596_1661 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D I596_2655 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D I596_1662 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D I596_1440 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D I596_514 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1966 Farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D I596_789 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D I596_919 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:dko00906] D I596_2145 Hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:dko00907] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_769 Short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase D I596_1915 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D I596_2211 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D I596_1377 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D I596_2496 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D I596_847 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:dko00523] D I596_3143 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D I596_3060 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D I596_3142 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D I596_3141 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D I596_3060 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:dko00311] D I596_1956 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D I596_231 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:dko00332] D I596_973 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D I596_974 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dko00261] D I596_3355 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D I596_3356 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D I596_1565 Adenylylsulfate kinase ApsK K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D I596_2408 Bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_825 Aspartokinase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D I596_818 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D I596_1958 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D I596_2702 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D I596_1727 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dko00521] D I596_3660 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D I596_3012 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D I596_3143 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D I596_3060 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D I596_3142 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D I596_3141 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:dko00525] D I596_3143 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D I596_3060 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:dko00401] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_1704 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3476 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D I596_1583 Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D I596_2263 Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D I596_2281 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D I596_1601 Dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_3393 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_2280 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D I596_3378 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_3379 Acyl carrier protein K02078 acpP; acyl carrier protein D I596_2279 Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:dko00999] D I596_1079 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D I596_3419 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:dko00362] D I596_1377 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D I596_481 2-aminomuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D I596_3508 Intradiol ring-cleavage dioxygenase K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D I596_1378 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D I596_3228 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D I596_2664 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation [PATH:dko00364] D I596_360 Carboxymethylenebutenolidase 3 K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D I596_1234 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D I596_2461 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:dko00625] D I596_1749 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D I596_1067 Methanol dehydrogenase large subunit protein K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7] D I596_1064 Methanol dehydrogenase, small subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7] D I596_887 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:dko00361] D I596_360 Carboxymethylenebutenolidase 3 K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D I596_1234 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D I596_2461 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:dko00623] D I596_360 Carboxymethylenebutenolidase 3 K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D I596_1234 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D I596_2461 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation D I596_481 2-aminomuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D I596_1377 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:dko00643] D I596_873 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D I596_875 Maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D I596_874 Fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:dko00930] D I596_485 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:dko00626] D I596_1749 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D I596_2121 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D I596_3508 Intradiol ring-cleavage dioxygenase K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dko03020] D I596_2635 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D I596_2634 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D I596_2604 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D I596_2673 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dko03010] D I596_1708 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D I596_1946 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D I596_2622 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D I596_2605 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D I596_2611 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D I596_1606 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D I596_2632 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D I596_2614 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D I596_2254 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D I596_2629 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D I596_2606 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D I596_2633 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D I596_2607 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D I596_2615 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D I596_1362 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D I596_1614 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D I596_2619 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D I596_1607 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D I596_2624 Ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D I596_2326 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D I596_2925 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D I596_2638 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D I596_2625 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D I596_2628 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D I596_2627 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D I596_2616 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D I596_2613 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D I596_2636 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D I596_1608 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D I596_2637 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D I596_2639 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D I596_2255 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D I596_2618 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D I596_2609 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D I596_2621 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D I596_2603 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D I596_2612 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D I596_1617 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D I596_3203 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D I596_2323 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D I596_2623 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D I596_2626 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D I596_2617 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D I596_2652 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D I596_2324 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D I596_3429 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D I596_2620 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D I596_2610 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D I596_2678 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D I596_2284 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D I596_3430 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D I596_3822 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D I596_3204 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D I596_2020 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D I596_854 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D I596_3667 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D I596_857 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D I596_3664 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D I596_3663 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D I596_858 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dko00970] D I596_2179 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_2458 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_856 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_3665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_621 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_2037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_2142 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_178 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_2506 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D I596_265 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D I596_2460 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D I596_1449 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D I596_266 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D I596_2654 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D I596_2253 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D I596_2459 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D I596_2699 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D I596_926 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D I596_2645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D I596_1448 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D I596_2141 tRNA-His K14226 tRNA-His; tRNA His D I596_3666 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D I596_855 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D I596_1338 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D I596_1980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D I596_2139 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D I596_2990 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D I596_2140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D I596_1355 tRNA-Met K14230 tRNA-Met; tRNA Met D I596_1509 tRNA-Met K14230 tRNA-Met; tRNA Met D I596_2566 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D I596_1895 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D I596_2143 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D I596_3198 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D I596_1807 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_2291 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_2597 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_1560 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_2644 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D I596_3445 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D I596_2332 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D I596_2642 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D I596_2646 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D I596_2133 tRNA-Val K14237 tRNA-Val; tRNA Val D I596_2333 tRNA-Val K14237 tRNA-Val; tRNA Val D I596_2501 tRNA-Val K14237 tRNA-Val; tRNA Val D I596_1986 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D I596_1458 Glutamate-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D I596_2777 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D I596_2776 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D I596_2778 Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D I596_731 Glutamine-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D I596_2293 Alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D I596_2973 Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D I596_1604 Asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D I596_3715 Glycine-tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D I596_3714 Glycine-tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D I596_3206 Threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D I596_1833 Serine-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D I596_1988 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D I596_2570 Cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D I596_2764 Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D I596_464 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D I596_3221 Valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D I596_2003 Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D I596_2330 Isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D I596_1631 Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D I596_3452 Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D I596_2934 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D I596_1897 Histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D I596_3202 Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D I596_3201 Phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D I596_3668 Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D I596_2399 Tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dko03060] D I596_2608 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D I596_2641 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D I596_1337 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D I596_3004 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D I596_3003 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D I596_3005 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D I596_3824 Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D I596_562 Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D I596_3745 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D I596_1613 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D I596_1801 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D I596_3720 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA D I596_3719 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D I596_3718 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC D I596_494 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D I596_515 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dko04122] D I596_2762 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D I596_1645 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D I596_1887 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D I596_1884 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D I596_1886 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein D I596_1390 Dinucleotide-utilizing enzyme K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D I596_1885 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D I596_2662 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D I596_924 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:dko03018] D I596_3334 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D I596_2594 Ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D I596_592 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D I596_1659 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D I596_1363 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D I596_2268 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D I596_1732 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D I596_1374 DNA/RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D I596_1503 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D I596_594 Transcription termination factor Rho K03628 rho; transcription termination factor Rho D I596_1725 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D I596_3697 Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D I596_1973 RNA-binding protein Hfq K03666 hfq; host factor-I protein D I596_2718 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D I596_2663 Transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D I596_2698 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dko03030] D I596_2126 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D I596_906 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D I596_2429 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D I596_2273 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D I596_2000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D I596_3220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D I596_3820 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D I596_1609 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D I596_399 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D I596_819 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D I596_2127 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D I596_907 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D I596_475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D I596_382 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dko03410] D I596_2767 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D I596_3047 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D I596_2085 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D I596_3436 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D I596_106 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D I596_3467 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D I596_23 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D I596_3673 Exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D I596_1219 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D I596_475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D I596_1628 Exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D I596_382 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dko03420] D I596_2589 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D I596_2322 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D I596_2503 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D I596_1445 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D I596_3447 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D I596_475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D I596_382 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:dko03430] D I596_2303 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D I596_2686 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D I596_3447 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D I596_3526 Exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D I596_1536 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D I596_1967 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D I596_1628 Exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D I596_819 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D I596_906 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D I596_3820 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D I596_2429 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D I596_2000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D I596_2273 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D I596_2126 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D I596_3220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D I596_382 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:dko03440] D I596_1628 Exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D I596_819 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D I596_3819 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D I596_498 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D I596_2427 Recombination protein RecR K06187 recR; recombination protein RecR D I596_2296 Protein RecA K03553 recA; recombination protein RecA D I596_475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D I596_2977 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D I596_2980 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D I596_2976 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D I596_2676 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D I596_2028 Exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D I596_2029 Exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D I596_2027 Exodeoxyribonuclease V, subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D I596_906 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D I596_3820 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D I596_2429 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D I596_2000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D I596_2273 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D I596_2126 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D I596_3220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D I596_3049 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:dko03450] D I596_2241 Ku domain-containing protein K10979 ku; DNA end-binding protein Ku D I596_2244 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D I596_1643 Putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:dko03250] D I596_864 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses D I596_18 Dipeptidyl aminopeptidase/acylaminoacyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_3688 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dko02010] D I596_1474 Sulfate ABC transporter, periplasmic sulfate-binding protein, CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D I596_1472 Sulfate ABC transporter, periplasmic sulfate-binding protein, CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D I596_1473 Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D I596_1475 Sulfate ABC transporter, inner membrane subunit, CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D I596_1476 Sulfate ABC transporter, ATPase subunit, CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D I596_1485 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein D I596_1484 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D I596_1483 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D I596_533 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D I596_532 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D I596_534 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D I596_1002 Organic solvent resistance ABC transporter auxiliary protein K07323 mlaC; phospholipid transport system substrate-binding protein D I596_1003 Organic solvent resistance ABC transporter periplasmic protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D I596_3111 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D I596_1004 Putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D I596_3109 Putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D I596_1001 Anti-anti-sigma regulatory factor K07122 mlaB; phospholipid transport system transporter-binding protein D I596_1005 Putative ABC transport system, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D I596_3110 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D I596_2717 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_2900 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_1741 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_2575 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D I596_1740 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D I596_2574 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D I596_1739 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D I596_2573 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D I596_1738 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D I596_2007 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D I596_2006 D-and L-methionine transport protein K02072 metI; D-methionine transport system permease protein D I596_2005 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D I596_3625 ABC-type polysaccharide/polyol phosphate export system, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D I596_766 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D I596_767 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D I596_3626 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D I596_3781 ABC transporter sodium permease K09696 natB; sodium transport system permease protein D I596_3780 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D I596_3149 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D I596_3148 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D I596_243 Heme exporter protein D K02196 ccmD; heme exporter protein D D I596_244 Heme exporter protein CcmC K02195 ccmC; heme exporter protein C D I596_245 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B D I596_246 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D I596_3217 Putative permease K07091 lptF; lipopolysaccharide export system permease protein D I596_3216 Putative permease K11720 lptG; lipopolysaccharide export system permease protein D I596_1686 ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D I596_3045 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D I596_3044 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D I596_3144 Lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D I596_1326 ABC transporter K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D I596_842 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D I596_841 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D I596_2229 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) [PATH:dko02060] D I596_1678 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D I596_1679 Phosphotransferase system HPr enzyme K02784 ptsH; phosphocarrier protein HPr D I596_1680 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D I596_1683 PTS mannitol importer K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:dko03070] D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein D I596_586 General secretion pathway protein GspD K02453 gspD; general secretion pathway protein D D I596_761 General secretion pathway protein GspD K02453 gspD; general secretion pathway protein D D I596_587 General secretion pathway protein GspC K02452 gspC; general secretion pathway protein C D I596_3043 General secretion pathway protein GspF K02455 gspF; general secretion pathway protein F D I596_752 General secretion pathway protein GspF K02455 gspF; general secretion pathway protein F D I596_2747 General secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D I596_753 General secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D I596_2748 General secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D I596_754 General secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D I596_2749 General secretion pathway protein GspI K02458 gspI; general secretion pathway protein I D I596_755 General secretion pathway protein GspI K02458 gspI; general secretion pathway protein I D I596_2750 General secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J D I596_756 General secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J D I596_2751 General secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D I596_757 General secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D I596_758 General secretion pathway protein L K02461 gspL; general secretion pathway protein L D I596_821 General secretion pathway protein L K02461 gspL; general secretion pathway protein L D I596_759 General secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D I596_822 General secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D I596_3716 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D I596_585 General secretory pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D I596_751 General secretory pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D I596_3004 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D I596_3003 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D I596_2641 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D I596_1337 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D I596_2608 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D I596_3005 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D I596_3824 Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D I596_562 Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D I596_1801 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D I596_3745 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D I596_1613 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D I596_3720 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA D I596_3719 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D I596_3718 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC D I596_2041 Serine/threonine protein kinase-related protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3053 Serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3102 Serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] B B 09132 Signal transduction C 02020 Two-component system [PATH:dko02020] D I596_2716 Two-component system sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D I596_2715 Phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D I596_1158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_3493 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_2717 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_2900 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_1741 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_3490 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D I596_3491 Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D I596_3364 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D I596_3363 Two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D I596_492 Periplasmic serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D I596_2945 Efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D I596_3498 Membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system D I596_2944 Acriflavin resistance protein K07788 mdtB; multidrug efflux pump D I596_3499 Acriflavin resistance protein K07788 mdtB; multidrug efflux pump D I596_2943 Acriflavin resistance protein K07789 mdtC; multidrug efflux pump D I596_3502 Acriflavin resistance protein K07789 mdtC; multidrug efflux pump D I596_1411 Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system D I596_1412 Cobalt-zinc-cadmium resistance protein CzcA/Cation efflux system protein CusA K07787 cusA; copper/silver efflux system protein D I596_427 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D I596_426 Putative two component system regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D I596_430 Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D I596_429 Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D I596_428 Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit D I596_3094 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D I596_3821 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D I596_3488 Oxacillin resistance-associated protein FmtC K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D I596_1582 Signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D I596_2231 D-alanyl-D-alanine carboxypeptidase family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D I596_524 Autolysin sensor kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D I596_523 Response regulator receiver protein K08083 algR; two-component system, LytTR family, response regulator AlgR D I596_3780 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D I596_3781 ABC transporter sodium permease K09696 natB; sodium transport system permease protein D I596_3743 Transcriptional regulator, LysR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D I596_2124 Signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D I596_3138 Two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D I596_3139 DNA-binding response regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D I596_2595 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D I596_2123 Two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D I596_2292 Carbon storage regulator K03563 csrA; carbon storage regulator D I596_61 Beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D I596_3192 Putative two-component system sensor kinase, ATP-binding region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D I596_3191 LuxR family two-component response regulator K07693 desR; two-component system, NarL family, response regulator DesR D I596_3772 Spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D I596_3775 Protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D I596_3774 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D I596_3773 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D I596_1948 Uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D I596_175 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D I596_140 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D I596_139 Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D I596_3683 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D I596_467 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D I596_528 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_2048 Two-component system, sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D I596_1068 Type IV fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D I596_1685 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor D I596_2534 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D I596_2526 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D I596_2525 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D I596_793 Type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ D I596_794 Type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI D I596_792 Signal transduction histidine kinase CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D I596_796 Twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D I596_1195 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_795 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_791 Chemotaxis response regulator protein-glutamate methylesterase CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D I596_790 Chemotaxis signal transduction protein CheW K06598 chpC; chemosensory pili system protein ChpC D I596_1402 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D I596_1403 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit D I596_1633 Putative regulation of pathogenicity factor rpfc protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D I596_1632 Response regulator K13815 rpfG; two-component system, response regulator RpfG D I596_2259 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D I596_1634 Enoyl-CoA hydratase/isomerase K13816 rpfF; DSF synthase D I596_3366 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D I596_2300 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D I596_3367 Response regulator K15012 regA; two-component system, response regulator RegA D I596_2301 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA D I596_2392 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D I596_2393 Ubiquinol-cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D I596_2394 Ubiquinol-cytochrome c reductase, cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D I596_2389 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D I596_2388 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D I596_2387 Hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D I596_2386 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D I596_838 Cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D I596_839 Cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein D I596_1120 Putative polysaccharide export protein, outer membrane K01991 wza; polysaccharide biosynthesis/export protein D I596_1443 Protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D I596_1771 Anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor D I596_698 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:dko04148] D I596_2931 Arginase K01476 rocF; arginase [EC:3.5.3.1] D I596_2392 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dko02024] D I596_1973 RNA-binding protein Hfq K03666 hfq; host factor-I protein D I596_1583 Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D I596_2263 Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D I596_2601 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D I596_426 Putative two component system regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D I596_1634 Enoyl-CoA hydratase/isomerase K13816 rpfF; DSF synthase D I596_1080 Metallopeptidase domain protein K20274 zmpB; zinc metalloprotease ZmpB D I596_1636 Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_1146 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_1633 Putative regulation of pathogenicity factor rpfc protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D I596_1632 Response regulator K13815 rpfG; two-component system, response regulator RpfG D I596_2259 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D I596_1460 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D I596_632 Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D I596_3824 Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D I596_992 Subtilisin K14645 K14645; serine protease [EC:3.4.21.-] D I596_2641 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D I596_1337 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D I596_2608 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D I596_3005 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D I596_562 Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D I596_1801 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D I596_3745 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D I596_1613 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:dko02030] D I596_2525 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D I596_2526 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D I596_3307 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:dko02040] D I596_3307 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D I596_537 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D I596_1685 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D I596_1659 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:dko04980] D I596_2157 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D I596_3346 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D I596_3348 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:dko01501] D I596_3671 Major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D I596_504 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D I596_232 Regulatory protein K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D I596_61 Beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D I596_1294 Ferric siderophore transport system, periplasmic binding protein TonB K02172 blaR1; bla regulator protein blaR1 D I596_941 TonB domain/peptidase M56 domain-containing protein K02172 blaR1; bla regulator protein blaR1 D I596_1559 Hypothetical protein K02172 blaR1; bla regulator protein blaR1 D I596_274 Antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1 D I596_1295 CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_1558 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_940 Transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_231 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D I596_1087 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_2054 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system D I596_3438 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_1088 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2055 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D I596_3439 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein D I596_2115 Penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D I596_2783 Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D I596_548 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:dko01502] D I596_555 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D I596_1610 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D I596_550 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D I596_551 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D I596_553 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D I596_2231 D-alanyl-D-alanine carboxypeptidase family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dko01503] D I596_3490 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D I596_3491 Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D I596_2754 Inner membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D I596_3364 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D I596_3363 Two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D I596_2687 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D I596_492 Periplasmic serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D I596_608 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D I596_609 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D I596_864 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D I596_1087 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_2054 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system D I596_3438 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_1088 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2055 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D I596_3439 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein D I596_911 Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D I596_3488 Oxacillin resistance-associated protein FmtC K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dko01000] C 01001 Protein kinases [BR:dko01001] D I596_2041 Serine/threonine protein kinase-related protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3053 Serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3102 Serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3528 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3589 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3686 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3690 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3694 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_95 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_115 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_1024 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2833 TPR repeat-containing serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_1100 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3756 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_201 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_208 Serine/threonine kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2950 TPR repeat-containing serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_590 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_1478 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_252 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_256 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_613 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_624 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2507 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3406 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3412 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_415 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2183 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2190 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2220 Non-specific serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2561 Serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_3225 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D I596_2474 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D I596_1751 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D I596_1122 Polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D I596_2716 Two-component system sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D I596_3490 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D I596_3364 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D I596_427 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D I596_1582 Signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D I596_2124 Signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D I596_3138 Two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D I596_3192 Putative two-component system sensor kinase, ATP-binding region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D I596_524 Autolysin sensor kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D I596_955 Sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D I596_3116 Histidine kinase family K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D I596_140 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D I596_467 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D I596_2048 Two-component system, sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D I596_792 Signal transduction histidine kinase CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D I596_1633 Putative regulation of pathogenicity factor rpfc protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D I596_3366 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D I596_2300 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D I596_698 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D I596_1824 Putative PAS/PAC sensor protein K19694 chiS; two-component system, sensor histidine kinase ChiS C 01009 Protein phosphatases and associated proteins [BR:dko01009] D I596_949 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D I596_1618 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D I596_2168 Serine-threonine specific protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:dko01002] D I596_515 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D I596_2537 Type IV prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D I596_2311 Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D I596_1407 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D I596_3469 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D I596_809 Peptidase C26 K07010 K07010; putative glutamine amidotransferase D I596_3185 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D I596_2119 Glutamate synthase, large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D I596_3042 Glutamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D I596_1144 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D I596_345 Hypothetical protein K07052 K07052; CAAX protease family protein D I596_2511 Hypothetical protein K07052 K07052; CAAX protease family protein D I596_2198 caax amino protease K07052 K07052; CAAX protease family protein D I596_3443 Aminopeptidase N K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D I596_3461 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D I596_1523 Dipeptidyl carboxypeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D I596_27 Zn-dependent oligopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D I596_2921 Dipeptidyl carboxypeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D I596_1080 Metallopeptidase domain protein K20274 zmpB; zinc metalloprotease ZmpB D I596_1979 Metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D I596_2064 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D I596_1899 Peptidase M14, carboxypeptidase A K05996 cpt; carboxypeptidase T [EC:3.4.17.18] D I596_3283 Peptidase M14, carboxypeptidase A K05996 cpt; carboxypeptidase T [EC:3.4.17.18] D I596_2231 D-alanyl-D-alanine carboxypeptidase family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D I596_3750 Putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D I596_3320 Putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D I596_3321 Putative ubiquinol-cytochrome-c reductase complex core protein I K07263 pqqL; zinc protease [EC:3.4.24.-] D I596_2902 Peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D I596_3218 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D I596_1951 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D I596_1947 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D I596_2049 Xaa-Pro dipeptidase PepQ K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D I596_1083 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D I596_2819 Bacterial leucyl aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10] D I596_2091 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D I596_1194 Protease HtpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D I596_2199 Peptidase M48, Ste24p K07387 K07387; metalloprotease [EC:3.4.24.-] D I596_2714 Putative Zn-dependent protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D I596_916 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D I596_1294 Ferric siderophore transport system, periplasmic binding protein TonB K02172 blaR1; bla regulator protein blaR1 D I596_941 TonB domain/peptidase M56 domain-containing protein K02172 blaR1; bla regulator protein blaR1 D I596_1559 Hypothetical protein K02172 blaR1; bla regulator protein blaR1 D I596_274 Antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1 D I596_1765 Peptidyl-Asp metalloendopeptidase K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D I596_604 Peptidyl-Asp metallopeptidase K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D I596_650 Peptidyl-Asp metallopeptidase K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D I596_32 MtfA domain containing protein K09933 mtfA; MtfA peptidase D I596_492 Periplasmic serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D I596_2391 Trypsin-like serine protease with C-terminal PDZ domain K04772 degQ; serine protease DegQ [EC:3.4.21.-] D I596_2899 Protease Do K04772 degQ; serine protease DegQ [EC:3.4.21.-] D I596_992 Subtilisin K14645 K14645; serine protease [EC:3.4.21.-] D I596_3319 Subtilase family K17734 aprX; serine protease AprX [EC:3.4.21.-] D I596_782 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D I596_18 Dipeptidyl aminopeptidase/acylaminoacyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_3688 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_3065 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D I596_351 Beta-lactamase K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D I596_3260 Beta-lactamase K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D I596_1831 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D I596_2137 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D I596_2135 ATP-dependent protease La, Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D I596_1779 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D I596_494 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D I596_3137 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D I596_3197 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D I596_362 Acylglycerol lipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D I596_3061 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D I596_454 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D I596_2773 Peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-] D I596_1034 Tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-] D I596_3709 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-] D I596_2089 Protease K08676 tri; tricorn protease [EC:3.4.21.-] D I596_1956 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D I596_2398 Signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D I596_1914 Cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D I596_620 Cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D I596_3006 Putative membrane protein K07059 K07059; rhomboid family protein D I596_693 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D I596_471 Peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D I596_1796 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_3734 Gamma-glutamyltransferase 2 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D I596_1720 Putative Zn-dependent protease-like protein K03592 pmbA; PmbA protein D I596_1718 Putative Zn-dependent protease-like protein K03568 tldD; TldD protein D I596_1697 Alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin D I596_1976 HflC protein K04087 hflC; modulator of FtsH protease HflC D I596_1975 Integral membrane protease subunit K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:dko01003] D I596_1643 Putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D I596_2961 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D I596_1676 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D I596_1695 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D I596_3026 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D I596_2115 Penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D I596_3269 Cyclic beta-1,2-glucan synthase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D I596_2957 Alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dko01005] D I596_911 Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D I596_910 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D I596_559 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D I596_913 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D I596_863 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D I596_3059 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D I596_2435 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D I596_535 Lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D I596_893 Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D I596_2436 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D I596_2754 Inner membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D I596_1882 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D I596_1657 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D I596_1442 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D I596_1689 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D I596_1690 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D I596_1881 ADP-heptose-lipooligosaccharide heptosyltransferase II K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D I596_3487 Glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D I596_1429 Glycosyl transferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D I596_3704 Glycosyl transferase, family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dko01011] D I596_1692 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D I596_554 UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D I596_549 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D I596_555 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D I596_1610 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D I596_551 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D I596_553 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D I596_3682 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D I596_2577 Hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D I596_2327 Integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D I596_2115 Penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D I596_3026 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D I596_1695 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D I596_2783 Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D I596_548 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D I596_3065 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D I596_1831 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D I596_351 Beta-lactamase K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D I596_3260 Beta-lactamase K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D I596_1676 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D I596_2231 D-alanyl-D-alanine carboxypeptidase family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D I596_606 Soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D I596_3067 Lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D I596_2130 Membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D I596_1666 Lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D I596_2275 Aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D I596_3066 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D I596_2687 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:dko01004] D I596_2281 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D I596_2283 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D I596_3391 3-oxoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D I596_1300 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D I596_3394 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D I596_2278 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D I596_1601 Dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_3393 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_2280 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D I596_1301 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D I596_912 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D I596_2167 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D I596_470 Acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D I596_1422 Acyl-CoA thiolesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D I596_3431 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D I596_2530 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] D I596_72 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D I596_712 Acetyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D I596_3702 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D I596_1636 Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_1146 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_3729 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:dko01006] D I596_1966 Farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D I596_789 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D I596_919 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D I596_2145 Hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D I596_1972 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D I596_3656 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D I596_3095 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D I596_3786 UbiA prenyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:dko01007] D I596_1458 Glutamate-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D I596_731 Glutamine-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D I596_1193 Glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D I596_3668 Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D I596_2399 Tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D I596_2570 Cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D I596_3452 Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D I596_2764 Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D I596_2330 Isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D I596_3221 Valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D I596_2003 Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D I596_1631 Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D I596_2973 Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D I596_1604 Asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D I596_1897 Histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D I596_3715 Glycine-tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D I596_3714 Glycine-tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D I596_1833 Serine-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D I596_2934 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D I596_3206 Threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D I596_2293 Alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D I596_3202 Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D I596_3201 Phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D I596_3075 Class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D I596_3793 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D I596_1470 Methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D I596_1704 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_3476 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D I596_2038 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D I596_3650 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D I596_849 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D I596_2746 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D I596_850 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D I596_944 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_124 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D I596_1563 Alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D I596_1702 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dko00194] D I596_3002 Copper-bind domain containing protein K02638 petE; plastocyanin D I596_579 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D I596_578 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D I596_577 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D I596_576 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D I596_575 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D I596_574 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D I596_573 F0F1 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D I596_572 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dko03000] D I596_1205 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D I596_237 Transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D I596_2817 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D I596_3738 Transcriptional regulator, AraC family protein K07506 K07506; AraC family transcriptional regulator D I596_412 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D I596_188 ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D I596_106 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D I596_738 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D I596_357 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D I596_1545 Transcriptional regulator CysB-like protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D I596_232 Regulatory protein K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D I596_2490 Transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D I596_880 Lactate-responsive regulator LldR, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D I596_1941 Transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D I596_713 Putative TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D I596_2440 Transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D I596_3494 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D I596_2012 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D I596_1393 Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D I596_2448 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D I596_1863 Ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D I596_2551 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D I596_1460 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D I596_2259 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D I596_2374 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D I596_193 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D I596_108 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D I596_3604 Transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D I596_1295 CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_1558 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_940 Transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_30 Biotin operon repressor / Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D I596_433 Transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D I596_2200 Two component Fis family sigma54-specific transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D I596_2473 Hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D I596_583 Transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D I596_984 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D I596_2425 Transcriptional activator of acetoin dehydrogenase operon AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D I596_884 Transcriptional activator of acetoin dehydrogenase operon AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D I596_1486 Molybdenum-binding transcriptional regulator, ModE family protein K02019 modE; molybdate transport system regulatory protein D I596_3733 Helix-turn-helix domain protein K07726 K07726; putative transcriptional regulator D I596_3777 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator D I596_2058 Transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D I596_711 Methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D I596_3085 Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D I596_1841 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D I596_3427 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D I596_1723 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D I596_2703 Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor D I596_737 Nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D I596_2177 Negative transcriptional regulator K07734 paiB; transcriptional regulator D I596_799 Putative transcriptional regulator K07735 algH; putative transcriptional regulator D I596_1333 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D I596_631 Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D I596_545 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dko03021] D I596_2604 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D I596_2635 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D I596_2634 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D I596_2673 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D I596_537 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D I596_2095 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D I596_489 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D I596_2744 RNA polymerase sigma factor ECF-type K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D I596_2342 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D I596_1292 RNA polymerase sigma-54 factor RpoN K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D I596_391 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D I596_1498 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D I596_3048 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D I596_1685 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor D I596_1965 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D I596_1357 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D I596_636 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB D I596_2640 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D I596_2395 Stringent starvation protein A K03599 sspA; stringent starvation protein A D I596_2396 Stringent starvation protein B K03600 sspB; stringent starvation protein B D I596_490 Negative regulator of sigma E activity K03597 rseA; sigma-E factor negative regulatory protein RseA D I596_491 Sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D I596_1333 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D I596_1626 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D I596_1664 Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D I596_594 Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dko03019] D I596_2594 Ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D I596_1716 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D I596_496 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D I596_1732 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D I596_3266 Ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D I596_3532 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D I596_592 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D I596_2268 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D I596_1374 DNA/RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D I596_1503 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D I596_1659 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D I596_1363 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D I596_594 Transcription termination factor Rho K03628 rho; transcription termination factor Rho D I596_1725 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D I596_3697 Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D I596_1973 RNA-binding protein Hfq K03666 hfq; host factor-I protein D I596_2718 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D I596_2663 Transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D I596_2698 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D I596_3334 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D I596_2292 Carbon storage regulator K03563 csrA; carbon storage regulator D I596_1681 UPF0042 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D I596_408 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:dko03011] D I596_1708 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D I596_1946 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D I596_2622 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D I596_2605 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D I596_2611 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D I596_1606 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D I596_2632 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D I596_2614 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D I596_2254 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D I596_2629 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D I596_2606 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D I596_2633 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D I596_2607 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D I596_2615 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D I596_1362 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D I596_1614 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D I596_2619 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D I596_1607 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D I596_2624 Ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D I596_2326 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D I596_2925 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D I596_1466 Hypothetical protein K19033 PSRP4; 30S ribosomal protein S31 D I596_2638 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D I596_2625 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D I596_2628 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D I596_2627 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D I596_2616 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D I596_2613 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D I596_1608 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D I596_2637 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D I596_2639 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D I596_2636 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D I596_2255 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D I596_2618 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D I596_2609 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D I596_2621 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D I596_2603 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D I596_2612 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D I596_1617 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D I596_3203 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D I596_2323 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D I596_2623 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D I596_2626 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D I596_2617 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D I596_2324 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D I596_3429 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D I596_2620 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D I596_2610 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D I596_2678 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D I596_2284 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D I596_3430 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D I596_3822 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D I596_3204 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D I596_2020 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D I596_2652 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D I596_3663 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D I596_858 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D I596_854 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D I596_3667 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D I596_857 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D I596_3664 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dko03009] D I596_496 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D I596_3532 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D I596_497 GTP-binding protein Era K03595 era; GTPase D I596_2362 Small GTP-binding protein domain K03595 era; GTPase D I596_2325 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-] D I596_1333 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D I596_1357 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D I596_636 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB D I596_2640 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D I596_3408 Pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D I596_1597 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D I596_465 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D I596_3409 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D I596_1800 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D I596_2742 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D I596_3425 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D I596_546 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D I596_645 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D I596_1734 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D I596_2092 Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D I596_2009 Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D I596_55 Oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D I596_1590 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D I596_2584 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D I596_1425 23S rRNA (guanine-N-2-) -methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D I596_728 Ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D I596_1381 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D I596_502 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D I596_3211 Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D I596_1837 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D I596_3058 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D I596_2593 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D I596_1173 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D I596_3306 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D I596_1090 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D I596_2938 Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D I596_686 Acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D I596_938 Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D I596_1615 Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D I596_1547 Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D I596_403 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D I596_1670 50S ribosomal protein L3/Protein-N(5)-glutamine methyltransferase PrmB K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D I596_2347 Hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D I596_2594 Ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D I596_1716 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D I596_800 Putative Holliday junction resolvase YggF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D I596_722 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D I596_1374 DNA/RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D I596_3794 Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D I596_1386 GTP-binding protein EngA K03977 engA; GTPase D I596_1974 GTP-binding protein HflX K03665 hflX; GTPase D I596_458 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D I596_2674 RelA/SpoT family (P)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D I596_1360 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D I596_1356 Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D I596_2010 Iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein D I596_3286 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor D I596_2093 Putative RNA-binding protein containing KH domain K07574 yhbY; RNA-binding protein D I596_1719 DUF615 domain containing protein K09889 yjgA; ribosome-associated protein D I596_1684 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D I596_2650 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase D I596_2285 Putative metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dko03016] D I596_3266 Ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D I596_2421 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D I596_263 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D I596_1458 Glutamate-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D I596_2934 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D I596_2330 Isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D I596_2003 Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D I596_2764 Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D I596_731 Glutamine-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D I596_3452 Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D I596_1631 Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D I596_2973 Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D I596_2293 Alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D I596_1604 Asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D I596_3206 Threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D I596_1833 Serine-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D I596_2570 Cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D I596_3221 Valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D I596_1897 Histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D I596_3202 Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D I596_3201 Phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D I596_3668 Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D I596_2399 Tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D I596_536 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D I596_2426 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D I596_3030 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D I596_922 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D I596_1960 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D I596_1361 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D I596_1663 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D I596_458 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D I596_1972 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D I596_3825 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D I596_49 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D I596_1985 Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D I596_2771 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D I596_3823 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D I596_1743 Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D I596_1008 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D I596_2567 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D I596_1304 Putative ligase protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D I596_628 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D I596_3715 Glycine-tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D I596_3714 Glycine-tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D I596_1193 Glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D I596_1573 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D I596_2792 tRNA-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D I596_2401 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D I596_2371 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D I596_2872 Hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D I596_3782 Methyltransferase type 12 K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D I596_1616 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D I596_1090 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D I596_3011 tRNA/rRNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D I596_3747 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D I596_3762 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D I596_3211 Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D I596_1645 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D I596_3727 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D I596_1605 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D I596_3158 Folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D I596_3190 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D I596_2989 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D I596_2403 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D I596_2988 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D I596_3440 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D I596_2690 Epoxyqueuosine (oQ) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D I596_3189 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D I596_1968 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D I596_215 Peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D I596_2926 Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D I596_2688 ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D I596_3166 Molybdopterin biosynthesis protein MoeB K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D I596_1732 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D I596_1363 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dko03012] D I596_1359 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D I596_3205 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D I596_1178 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D I596_778 Glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D I596_1945 Elongation factor Ts K02357 tsf; elongation factor Ts D I596_2630 Elongation factor Tu K02358 tuf; elongation factor Tu D I596_2643 Elongation factor Tu K02358 tuf; elongation factor Tu D I596_2631 Elongation factor G K02355 fusA; elongation factor G D I596_2732 Elongation factor G K02355 fusA; elongation factor G D I596_1929 Elongation factor G K02355 fusA; elongation factor G D I596_1987 Selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D I596_2660 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D I596_920 Ribosome-recycling factor K02838 frr; ribosome recycling factor D I596_741 Protein-N(5)-glutamine methyltransferase PrmC K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D I596_2651 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D I596_1817 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D I596_1912 Elongation factor P K02356 efp; elongation factor P D I596_2149 Elongation factor P K02356 efp; elongation factor P D I596_336 Lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D I596_2150 Lysyl-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D I596_1630 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D I596_2346 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D I596_3764 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:dko03110] D I596_1649 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D I596_2963 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D I596_2136 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D I596_694 ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D I596_1618 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D I596_1725 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D I596_3697 Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D I596_1726 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D I596_2050 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein D I596_1576 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein D I596_2290 Disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33 D I596_1724 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D I596_2051 Low molecular weight heat shock protein K13993 HSP20; HSP20 family protein D I596_1231 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D I596_3698 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES D I596_492 Periplasmic serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D I596_2091 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D I596_572 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D I596_3774 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D I596_3745 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D I596_2320 Copper(I)-binding protein K09796 pccA; periplasmic copper chaperone A D I596_992 Subtilisin K14645 K14645; serine protease [EC:3.4.21.-] D I596_864 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D I596_3078 Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D I596_2131 Peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D I596_1180 Peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D I596_986 Peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D I596_1842 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D I596_1600 Chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D I596_593 Thioredoxin K03671 TXN; thioredoxin D I596_200 Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D I596_2060 Thioredoxin K05838 ybbN; putative thioredoxin D I596_2713 Glutaredoxin K03676 grxC; glutaredoxin 3 D I596_3789 Glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D I596_3023 Glutaredoxin K07390 grxD; monothiol glutaredoxin D I596_608 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D I596_609 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D I596_2602 Disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D I596_747 Protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D I596_748 Disulfide bond isomerase, DsbC/G-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D I596_235 Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:dko04131] D I596_1380 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_837 Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D I596_961 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D I596_1618 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:dko03051] D I596_1618 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:dko03032] D I596_2127 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D I596_1205 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D I596_2134 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D I596_3200 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D I596_1709 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D I596_3821 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D I596_1609 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D I596_399 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D I596_819 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D I596_906 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D I596_3820 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D I596_3220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D I596_2000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D I596_2273 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D I596_2126 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D I596_2429 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D I596_907 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D I596_475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D I596_382 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D I596_1853 Putative permease K10763 hda; DnaA-homolog protein D I596_1748 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D I596_3818 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D I596_1957 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D I596_1653 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D I596_459 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D I596_2445 Putative DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dko03036] D I596_1643 Putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D I596_1205 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D I596_496 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_2932 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D I596_2134 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D I596_3200 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D I596_1709 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D I596_2050 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein D I596_3821 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D I596_3096 Ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein D I596_433 Transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D I596_1973 RNA-binding protein Hfq K03666 hfq; host factor-I protein D I596_357 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D I596_3494 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D I596_1843 Chromosome partition protein smc K03529 smc; chromosome segregation protein D I596_1839 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D I596_1838 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B D I596_557 Cell division protein FtsA K03590 ftsA; cell division protein FtsA D I596_1660 Cell division protein FtsB K05589 ftsB; cell division protein FtsB D I596_3044 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D I596_548 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D I596_1822 DNA segregation ATPase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D I596_547 Cell division protein FtsL K03586 ftsL; cell division protein FtsL D I596_556 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D I596_552 Cell division protein FtsW K03588 ftsW; cell division protein FtsW D I596_3045 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D I596_558 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D I596_1844 Cell division protein ZipA K03528 zipA; cell division protein ZipA D I596_970 Cell division protein ZapA K09888 zapA; cell division protein ZapA D I596_971 Hypothetical protein K09892 zapB; cell division protein ZapB D I596_171 Putative ATPase K06916 zapE; cell division protein ZapE D I596_2687 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D I596_1087 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_2054 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system D I596_3438 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_1528 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D I596_1527 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D I596_1526 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D I596_2780 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D I596_2781 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D I596_2782 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D I596_2784 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D I596_127 partition protein K03496 parA; chromosome partitioning protein D I596_3426 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein D I596_3427 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D I596_1957 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D I596_1653 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D I596_49 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D I596_3425 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D I596_691 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D I596_746 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D I596_2763 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D I596_2905 Filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D I596_397 GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:dko03400] D I596_105 Methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D I596_3706 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D I596_3047 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D I596_2085 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D I596_2767 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D I596_563 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D I596_1375 7,8-dihydro-8-oxoguanine-triphosphatase, MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D I596_3659 Deoxyuridine 5''''-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D I596_188 ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D I596_1415 2OG-Fe(II) oxygenase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D I596_106 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D I596_3467 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D I596_3436 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D I596_23 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D I596_3673 Exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D I596_1219 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D I596_1628 Exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D I596_382 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D I596_475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D I596_2322 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D I596_2503 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D I596_1445 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D I596_3447 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D I596_2635 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D I596_2634 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D I596_2604 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D I596_2673 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D I596_2589 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D I596_2303 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D I596_2686 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D I596_3526 Exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D I596_1536 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D I596_1967 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D I596_906 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D I596_3820 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D I596_3220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D I596_2000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D I596_2273 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D I596_2126 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D I596_2429 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D I596_819 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D I596_1206 Putative patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D I596_2028 Exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D I596_2029 Exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D I596_2027 Exodeoxyribonuclease V, subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D I596_2296 Protein RecA K03553 recA; recombination protein RecA D I596_2977 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D I596_2980 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D I596_2976 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D I596_3049 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D I596_1611 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D I596_3819 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D I596_2676 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D I596_498 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D I596_2427 Recombination protein RecR K06187 recR; recombination protein RecR D I596_1722 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D I596_3726 Recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D I596_2480 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D I596_1754 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D I596_1665 ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D I596_2241 Ku domain-containing protein K10979 ku; DNA end-binding protein Ku D I596_2244 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D I596_1748 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D I596_3818 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D I596_459 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D I596_2445 Putative DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D I596_2134 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D I596_433 Transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D I596_3200 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D I596_1709 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D I596_1503 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D I596_2932 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D I596_2941 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D I596_1779 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D I596_1780 Hypothetical protein K14160 imuA; protein ImuA D I596_1781 DNA repair nucleotidyltransferase/DNA polymerase-like protein K14161 imuB; protein ImuB D I596_1782 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D I596_2294 Regulatory protein RecX K03565 recX; regulatory protein D I596_37 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D I596_3028 DNA helicase, Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D I596_91 Putative ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D I596_446 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D I596_2898 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D I596_445 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:dko03029] D I596_2393 Ubiquinol-cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D I596_1359 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D I596_3205 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D I596_1945 Elongation factor Ts K02357 tsf; elongation factor Ts D I596_2630 Elongation factor Tu K02358 tuf; elongation factor Tu D I596_2643 Elongation factor Tu K02358 tuf; elongation factor Tu D I596_2631 Elongation factor G K02355 fusA; elongation factor G D I596_2732 Elongation factor G K02355 fusA; elongation factor G D I596_1929 Elongation factor G K02355 fusA; elongation factor G D I596_497 GTP-binding protein Era K03595 era; GTPase D I596_2362 Small GTP-binding protein domain K03595 era; GTPase D I596_3668 Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D I596_2003 Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D I596_2973 Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D I596_3452 Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D I596_2777 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D I596_2776 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D I596_2778 Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D I596_819 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D I596_915 Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D I596_1725 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D I596_1724 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D I596_3697 Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D I596_3698 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES D I596_1726 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D I596_3789 Glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D I596_3023 Glutaredoxin K07390 grxD; monothiol glutaredoxin D I596_2763 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D I596_3095 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D I596_3089 Putative cytochrome c oxidase assembly protein ctag/cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D I596_3094 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D I596_3824 Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D I596_3092 SURF1 domain containing protein K14998 SURF1; surfeit locus 1 family protein D I596_1669 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D I596_1618 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dko02000] D I596_3144 Lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D I596_3674 Beta-(1->2)glucan export ATP-binding/permease protein NdvA K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3] D I596_1326 ABC transporter K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D I596_3422 ABC transporter permease, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D I596_507 ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D I596_842 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D I596_841 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D I596_2229 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D I596_1036 Putative abc transporter atp-binding abc transporter, atp-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D I596_1474 Sulfate ABC transporter, periplasmic sulfate-binding protein, CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D I596_1472 Sulfate ABC transporter, periplasmic sulfate-binding protein, CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D I596_1473 Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D I596_1475 Sulfate ABC transporter, inner membrane subunit, CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D I596_1476 Sulfate ABC transporter, ATPase subunit, CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D I596_1485 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein D I596_1484 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D I596_1483 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D I596_533 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D I596_532 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D I596_534 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D I596_1003 Organic solvent resistance ABC transporter periplasmic protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D I596_3111 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D I596_1004 Putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D I596_3109 Putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D I596_1005 Putative ABC transport system, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D I596_3110 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D I596_3112 Putative lipoprotein K18480 linN; cholesterol transport system auxiliary component D I596_1002 Organic solvent resistance ABC transporter auxiliary protein K07323 mlaC; phospholipid transport system substrate-binding protein D I596_1001 Anti-anti-sigma regulatory factor K07122 mlaB; phospholipid transport system transporter-binding protein D I596_2717 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_2900 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_1741 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D I596_2575 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D I596_1740 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D I596_2574 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D I596_1739 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D I596_2573 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D I596_1738 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D I596_2007 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D I596_2006 D-and L-methionine transport protein K02072 metI; D-methionine transport system permease protein D I596_2005 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D I596_701 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D I596_3735 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D I596_3625 ABC-type polysaccharide/polyol phosphate export system, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D I596_766 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D I596_767 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D I596_3626 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D I596_3217 Putative permease K07091 lptF; lipopolysaccharide export system permease protein D I596_3216 Putative permease K11720 lptG; lipopolysaccharide export system permease protein D I596_1686 ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D I596_3781 ABC transporter sodium permease K09696 natB; sodium transport system permease protein D I596_3780 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D I596_1552 Putative ABC transporter, permease protein K25151 gldF; gliding motility-associated transport system permease protein D I596_3433 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein D I596_3432 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D I596_1551 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D I596_1553 ABC transporter involved in gliding motility, auxiliary component K25153 gldG; gliding motility-associatede transport system auxiliary component D I596_3434 ABC transporter K25153 gldG; gliding motility-associatede transport system auxiliary component D I596_2165 ABC transport system, permease component YbhR K25187 pltK; pyoluteorin transport system permease protein D I596_2164 ABC transport system, permease component YbhS K25188 pltJ; pyoluteorin transport system permease protein D I596_2163 ABC transporter related protein K25189 pltI; pyoluteorin transport system ATP-binding protein D I596_2162 Hemolysin D K25190 pltH; membrane fusion protein PltH D I596_2166 RND efflux system, outer membrane lipoprotein, NodT family K25184 pltN; outer membrane protein PltN D I596_3149 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D I596_3148 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D I596_243 Heme exporter protein D K02196 ccmD; heme exporter protein D D I596_244 Heme exporter protein CcmC K02195 ccmC; heme exporter protein C D I596_245 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B D I596_246 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D I596_3045 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D I596_3044 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D I596_3769 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D I596_3281 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D I596_2545 Putative ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D I596_3194 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D I596_1430 Membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D I596_3579 Putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_2880 ABC transporter-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_3770 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_3282 ABC transporter related-protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_2544 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_3195 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_1431 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D I596_2723 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_2724 ABC-type transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D I596_1111 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D I596_1112 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_468 Putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D I596_805 Putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D I596_308 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_309 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_310 ABC efflux pump, inner membrane subunit K02004 ABC.CD.P; putative ABC transport system permease protein D I596_312 Putative permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_313 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_314 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_315 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_316 ABC efflux pump, inner membrane subunit K02004 ABC.CD.P; putative ABC transport system permease protein D I596_318 Hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D I596_323 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_325 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_327 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_334 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_1307 Permease K02004 ABC.CD.P; putative ABC transport system permease protein D I596_2725 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D I596_1110 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D I596_307 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D I596_469 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D I596_804 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D I596_326 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D I596_1859 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D I596_441 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D I596_3603 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D I596_3052 Putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D I596_1212 Dicarboxylate transport protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D I596_335 Putative Major Facilitator Superfamily transport permease protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D I596_3671 Major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D I596_959 Tetracycline resistance protein, class A K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D I596_3234 Major facilitator superfamily protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D I596_1521 Major facilitator superfamily transmembrane protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D I596_1805 Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D I596_3017 Major facilitator superfamily transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D I596_3414 EmrB/QacA subfamily drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D I596_1815 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D I596_1678 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D I596_1679 Phosphotransferase system HPr enzyme K02784 ptsH; phosphocarrier protein HPr D I596_1680 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D I596_1683 PTS mannitol importer K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D I596_170 Aquaporin Z K06188 aqpZ; aquaporin Z D I596_174 Ammonium transporter K03320 amt; ammonium transporter, Amt family D I596_2962 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1223 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1249 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_1564 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_2557 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_3226 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D I596_2395 Stringent starvation protein A K03599 sspA; stringent starvation protein A D I596_2103 Membrane protein involved in colicin uptake K07114 yfbK; Ca-activated chloride channel homolog D I596_2104 Hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D I596_480 Carrier/transport protein K19416 yccA; modulator of FtsH protease D I596_1094 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D I596_2248 Small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel D I596_1675 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D I596_3113 Magnesium transporter K06213 mgtE; magnesium transporter D I596_3161 Mg/Co/Ni transporter MgtE K06213 mgtE; magnesium transporter D I596_3307 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D I596_150 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D I596_3815 Biopolymer transport ExbB protein K03561 exbB; biopolymer transport protein ExbB D I596_3146 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D I596_149 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D I596_3813 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D I596_3814 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D I596_3145 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D I596_2982 TolQ protein K03562 tolQ; biopolymer transport protein TolQ D I596_2983 Protein TolR K03560 tolR; biopolymer transport protein TolR D I596_3238 Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA K03284 corA; magnesium transporter D I596_1505 Hypothetical protein K06199 crcB; fluoride exporter D I596_2466 Putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D I596_2549 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D I596_848 Hypothetical protein K16079 omp31; outer membrane immunogenic protein D I596_1569 Pyrophosphate-specific outer membrane porin OprO K07221 oprO_P; phosphate-selective porin OprO and OprP D I596_1747 Putative polyphosphate-selective porin O K07221 oprO_P; phosphate-selective porin OprO and OprP D I596_3013 Outer membrane protein/peptidoglycan-associated (Lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D I596_213 Outer membrane protein K06076 fadL; long-chain fatty acid transport protein D I596_3773 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D I596_1869 Ferrichrome-iron receptor K16090 fiu; catecholate siderophore receptor D I596_2443 Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter D I596_3106 TonB-dependent receptor plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D I596_152 Putative hemin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D I596_2375 Putative heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D I596_9 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_2824 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_2858 TonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_565 Outer membrane vitamin B12 receptor BtuB K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_1462 Outer membrane hemin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_1487 Putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_3519 Iron transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_1774 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D I596_1097 Putative cobalt-zinc-cadmium resistance protein K15725 czcC; outer membrane protein, heavy metal efflux system D I596_1104 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D I596_1410 Heavy metal RND efflux outer membrane protein,CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein D I596_1120 Putative polysaccharide export protein, outer membrane K01991 wza; polysaccharide biosynthesis/export protein D I596_915 Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D I596_1385 Outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D I596_1172 Outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D I596_2552 TmRNA-binding small protein A K06186 bamE; outer membrane protein assembly factor BamE D I596_724 Surface antigen (D15) K07278 tamA; translocation and assembly module TamA D I596_723 Pathogenicity protein K09800 tamB; translocation and assembly module TamB D I596_2218 Fibronectin type III domain protein K21449 ata; trimeric autotransporter adhesin D I596_1687 Lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D I596_1688 Hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D I596_2467 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D I596_2001 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D I596_3236 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein D I596_1908 Amino acid permease K03757 cadB; cadaverine:lysine antiporter D I596_1465 Cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D I596_1165 Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family D I596_1095 Heavy metal efflux pump CzcA family K15726 czcA; heavy metal efflux system protein D I596_1412 Cobalt-zinc-cadmium resistance protein CzcA/Cation efflux system protein CusA K07787 cusA; copper/silver efflux system protein D I596_100 Multidrug efflux RND transporter, permease protein MexF K18299 mexF; multidrug efflux pump D I596_1088 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2055 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D I596_3439 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2944 Acriflavin resistance protein K07788 mdtB; multidrug efflux pump D I596_3499 Acriflavin resistance protein K07788 mdtB; multidrug efflux pump D I596_2943 Acriflavin resistance protein K07789 mdtC; multidrug efflux pump D I596_3502 Acriflavin resistance protein K07789 mdtC; multidrug efflux pump D I596_226 Small multidrug resistance protein K03297 emrE; small multidrug resistance pump D I596_2942 Small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D I596_2756 Putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D I596_2682 Hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D I596_1984 Calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter D I596_2082 Sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D I596_2045 Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D I596_3072 Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D I596_2769 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D I596_422 Kef-type K+ transport system K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D I596_681 Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D I596_2266 Cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D I596_1452 Na+/H+ antiporter K26731 CHX; K+:H+ antiporter D I596_305 Chromate transport protein ChrA K07240 chrA; chromate transporter D I596_3741 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family D I596_1402 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D I596_1403 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit D I596_1401 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein D I596_3527 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D I596_194 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter D I596_2327 Integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D I596_3740 Putative malate permease K24180 mleP; malate permease and related proteins D I596_2979 Putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein D I596_358 Lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D I596_2063 DUF165 domain containing protein K09125 yhhQ; queuosine precursor transporter D I596_94 Putative membrane protein K22736 VIT; vacuolar iron transporter family protein D I596_552 Cell division protein FtsW K03588 ftsW; cell division protein FtsW D I596_1730 Putative manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein D I596_148 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB D I596_3816 TonB family protein K03832 tonB; periplasmic protein TonB D I596_3068 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB D I596_783 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB D I596_798 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB D I596_2986 Peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D I596_2984 Protein TolA K03646 tolA; colicin import membrane protein D I596_2985 Protein TolB K03641 tolB; TolB protein D I596_780 K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D I596_3415 Multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system D I596_1096 Efflux system component, RND family K15727 czcB; membrane fusion protein, heavy metal efflux system D I596_1411 Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system D I596_99 RND efflux system, membrane fusion protein CmeA K18298 mexE; membrane fusion protein, multidrug efflux system D I596_1087 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_2054 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system D I596_3438 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_2945 Efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D I596_3498 Membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system D I596_2228 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D I596_1122 Polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D I596_1121 Lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator D I596_1810 Ferrous iron transport protein K04758 feoA; ferrous iron transport protein A D I596_1811 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D I596_236 Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D I596_3210 Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D I596_2835 MltA-interacting protein precursor K07274 mipA; MipA family protein D I596_2884 MltA-interacting protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:dko02044] D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein D I596_479 General secretion pathway protein A K02450 gspA; general secretion pathway protein A D I596_478 Hypothetical protein K02451 gspB; general secretion pathway protein B D I596_587 General secretion pathway protein GspC K02452 gspC; general secretion pathway protein C D I596_586 General secretion pathway protein GspD K02453 gspD; general secretion pathway protein D D I596_761 General secretion pathway protein GspD K02453 gspD; general secretion pathway protein D D I596_3716 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D I596_585 General secretory pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D I596_751 General secretory pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D I596_3043 General secretion pathway protein GspF K02455 gspF; general secretion pathway protein F D I596_752 General secretion pathway protein GspF K02455 gspF; general secretion pathway protein F D I596_2747 General secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D I596_753 General secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D I596_2748 General secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D I596_754 General secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D I596_2749 General secretion pathway protein GspI K02458 gspI; general secretion pathway protein I D I596_755 General secretion pathway protein GspI K02458 gspI; general secretion pathway protein I D I596_2750 General secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J D I596_756 General secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J D I596_2751 General secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D I596_757 General secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D I596_758 General secretion pathway protein L K02461 gspL; general secretion pathway protein L D I596_821 General secretion pathway protein L K02461 gspL; general secretion pathway protein L D I596_759 General secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D I596_822 General secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D I596_760 General secretion pathway protein GspN K02463 gspN; general secretion pathway protein N D I596_823 General secretion pathway protein GspN K02463 gspN; general secretion pathway protein N D I596_2537 Type IV prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D I596_2534 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D I596_2535 Type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D I596_2536 Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D I596_508 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE D I596_1382 Type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D I596_796 Twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D I596_1195 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_795 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_794 Type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI D I596_793 Type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ D I596_2114 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM D I596_2113 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN D I596_2112 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D I596_2111 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP D I596_2110 Type IV pilus secretin PilQ/competence protein K02666 pilQ; type IV pilus assembly protein PilQ D I596_707 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT D I596_64 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU D I596_3179 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU D I596_512 Type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D I596_511 Type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D I596_510 Type IV fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX D I596_509 Type IV fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D I596_2272 Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D I596_2505 Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT D I596_513 Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT D I596_1959 Tfp pilus assembly protein FimV-like protein K08086 fimV; pilus assembly protein FimV D I596_704 Putative integral membrane protein K02221 yggT; YggT family protein D I596_2068 Competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D I596_3147 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D I596_747 Protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D I596_748 Disulfide bond isomerase, DsbC/G-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D I596_2041 Serine/threonine protein kinase-related protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3053 Serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3102 Serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D I596_3774 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D I596_3773 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D I596_3772 Spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D I596_3775 Protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D I596_562 Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D I596_3745 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D I596_3004 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D I596_2641 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D I596_3003 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D I596_1337 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D I596_2608 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D I596_1613 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D I596_1801 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D I596_3005 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D I596_3824 Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D I596_3720 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA D I596_3719 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D I596_3718 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dko02042] D I596_2466 Putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D I596_2549 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D I596_834 Channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:dko02022] D I596_2716 Two-component system sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D I596_2715 Phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D I596_3490 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D I596_3491 Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D I596_3364 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D I596_3363 Two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D I596_427 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D I596_426 Putative two component system regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D I596_1582 Signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D I596_1493 Two-component regulatory system, response regulator protein K02483 K02483; two-component system, OmpR family, response regulator D I596_1581 Two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D I596_1073 Transcriptional regulator FeuP K02483 K02483; two-component system, OmpR family, response regulator D I596_3743 Transcriptional regulator, LysR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D I596_2124 Signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D I596_3138 Two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D I596_3139 DNA-binding response regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D I596_2595 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D I596_2123 Two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D I596_3192 Putative two-component system sensor kinase, ATP-binding region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D I596_3191 LuxR family two-component response regulator K07693 desR; two-component system, NarL family, response regulator DesR D I596_524 Autolysin sensor kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D I596_523 Response regulator receiver protein K08083 algR; two-component system, LytTR family, response regulator AlgR D I596_955 Sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D I596_3116 Histidine kinase family K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D I596_956 Two-component response regulator K02477 K02477; two-component system, LytTR family, response regulator D I596_3117 Sensory transduction protein lytT K02477 K02477; two-component system, LytTR family, response regulator D I596_3292 Two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D I596_140 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D I596_139 Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D I596_467 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D I596_528 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D I596_2048 Two-component system, sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D I596_1068 Type IV fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D I596_2525 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D I596_792 Signal transduction histidine kinase CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D I596_796 Twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D I596_1195 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_795 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_791 Chemotaxis response regulator protein-glutamate methylesterase CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D I596_1633 Putative regulation of pathogenicity factor rpfc protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D I596_1632 Response regulator K13815 rpfG; two-component system, response regulator RpfG D I596_3366 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D I596_2300 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D I596_3367 Response regulator K15012 regA; two-component system, response regulator RegA D I596_2301 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA D I596_698 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D I596_1824 Putative PAS/PAC sensor protein K19694 chiS; two-component system, sensor histidine kinase ChiS C 02035 Bacterial motility proteins [BR:dko02035] D I596_2526 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D I596_2525 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D I596_3307 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D I596_796 Twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D I596_1195 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_795 Twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D I596_794 Type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI D I596_793 Type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ D I596_792 Signal transduction histidine kinase CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D I596_1068 Type IV fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D I596_2048 Two-component system, sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D I596_707 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT D I596_64 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU D I596_3179 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU D I596_791 Chemotaxis response regulator protein-glutamate methylesterase CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D I596_790 Chemotaxis signal transduction protein CheW K06598 chpC; chemosensory pili system protein ChpC D I596_2534 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D I596_2535 Type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D I596_2536 Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D I596_2537 Type IV prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D I596_1382 Type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D I596_2110 Type IV pilus secretin PilQ/competence protein K02666 pilQ; type IV pilus assembly protein PilQ D I596_2111 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP D I596_2112 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D I596_2113 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN D I596_2114 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM D I596_2272 Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D I596_512 Type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D I596_511 Type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D I596_510 Type IV fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX D I596_509 Type IV fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D I596_508 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE D I596_3774 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D I596_3773 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D I596_3772 Spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D I596_3775 Protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dko04812] D I596_2780 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D I596_558 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D I596_557 Cell division protein FtsA K03590 ftsA; cell division protein FtsA D I596_1528 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D I596_1527 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D I596_1526 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D I596_127 partition protein K03496 parA; chromosome partitioning protein D I596_3426 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein D I596_3427 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dko04147] D I596_1618 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D I596_1084 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D I596_1659 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D I596_837 Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D I596_898 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D I596_961 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D I596_864 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D I596_3697 Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D I596_1725 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D I596_2693 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D I596_18 Dipeptidyl aminopeptidase/acylaminoacyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_3688 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_1405 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D I596_2630 Elongation factor Tu K02358 tuf; elongation factor Tu D I596_2643 Elongation factor Tu K02358 tuf; elongation factor Tu D I596_2426 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D I596_3030 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D I596_441 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D I596_1636 Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_1146 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D I596_135 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1162 3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D I596_1523 Dipeptidyl carboxypeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D I596_949 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D I596_772 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D I596_2170 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D I596_2175 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D I596_3785 Cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D I596_284 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D I596_3683 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D I596_3420 Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D I596_872 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D I596_2592 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D I596_1158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_3493 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_1571 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D I596_432 Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D I596_3130 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_1435 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D I596_2520 Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D I596_1336 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:dko02048] D I596_2480 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D I596_1754 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D I596_2479 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D I596_2485 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D I596_1755 CRISPR-associated helicase Cas3, Yersinia-type K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D I596_2481 CRISPR-associated RecB family exonuclease Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D I596_2483 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1 D I596_2482 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D I596_2484 CRISPR-associated protein, Cas5d family K19119 cas5d; CRISPR-associated protein Cas5d D I596_1757 CRISPR-associated protein, Csy2 family K19128 csy2; CRISPR-associated protein Csy2 D I596_1758 CRISPR-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3 D I596_1759 CRISPR-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D I596_1205 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D I596_3551 Hypothetical protein K19048 symE; toxic protein SymE D I596_2474 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D I596_1751 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D I596_2473 Hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D I596_558 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D I596_2780 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D I596_1957 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D I596_1653 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D I596_1458 Glutamate-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D I596_3151 Hypothetical protein K19168 cptA; toxin CptA D I596_3152 Hypothetical protein K09159 cptB; antitoxin CptB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins [BR:dko04031] C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:dko04090] D I596_18 Dipeptidyl aminopeptidase/acylaminoacyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_3688 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D I596_1523 Dipeptidyl carboxypeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:dko01504] D I596_3655 Neomycin phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95] D I596_2002 Streptomycin 6-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D I596_959 Tetracycline resistance protein, class A K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D I596_3234 Major facilitator superfamily protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D I596_1294 Ferric siderophore transport system, periplasmic binding protein TonB K02172 blaR1; bla regulator protein blaR1 D I596_941 TonB domain/peptidase M56 domain-containing protein K02172 blaR1; bla regulator protein blaR1 D I596_1559 Hypothetical protein K02172 blaR1; bla regulator protein blaR1 D I596_274 Antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1 D I596_1295 CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_1558 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_940 Transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D I596_231 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D I596_2231 D-alanyl-D-alanine carboxypeptidase family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D I596_3488 Oxacillin resistance-associated protein FmtC K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D I596_3490 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D I596_3491 Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D I596_1087 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_2054 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system D I596_3438 Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D I596_1088 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_2055 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D I596_3439 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump D I596_99 RND efflux system, membrane fusion protein CmeA K18298 mexE; membrane fusion protein, multidrug efflux system D I596_100 Multidrug efflux RND transporter, permease protein MexF K18299 mexF; multidrug efflux pump D I596_2440 Transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D I596_1393 Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D I596_2437 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dko00537] D I596_1158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D I596_3493 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dko03100] D I596_2179 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_2458 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_856 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_3665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D I596_621 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_2037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_2142 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_178 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D I596_2506 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D I596_265 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D I596_2460 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D I596_1449 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D I596_266 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D I596_2654 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D I596_2253 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D I596_2459 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D I596_2699 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D I596_926 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D I596_2645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D I596_1448 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D I596_2141 tRNA-His K14226 tRNA-His; tRNA His D I596_3666 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D I596_855 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D I596_1338 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D I596_1980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D I596_2139 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D I596_2990 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D I596_2140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D I596_1355 tRNA-Met K14230 tRNA-Met; tRNA Met D I596_1509 tRNA-Met K14230 tRNA-Met; tRNA Met D I596_2566 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D I596_1895 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D I596_2143 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D I596_3198 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D I596_1807 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_2291 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_2597 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_1560 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D I596_2644 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D I596_3445 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D I596_2332 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D I596_2642 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D I596_2646 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D I596_2133 tRNA-Val K14237 tRNA-Val; tRNA Val D I596_2333 tRNA-Val K14237 tRNA-Val; tRNA Val D I596_2501 tRNA-Val K14237 tRNA-Val; tRNA Val D I596_1986 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D I596_854 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D I596_3667 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D I596_857 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D I596_3664 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D I596_3663 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D I596_858 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D I596_3755 3-beta hydroxysteroid dehydrogenase/isomerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D I596_981 Quinoprotein alcohol dehydrogenase K20937 boh; 1-butanol dehydrogenase (quinone) [EC:1.1.5.11] D I596_2432 Glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D I596_680 FAD linked oxidase domain protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D I596_1541 Short-chain dehydrogenase/reductase SDR K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-] D I596_2288 Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D I596_3021 NADH:flavin oxidoreductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D I596_1320 Oxidoreductase, zinc-binding dehydrogenase family protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D I596_3134 Pyrroloquinoline-quinone (PQQ) synthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D I596_2741 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D I596_3036 Isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D I596_2270 Putative dehydrogenase subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D I596_845 Putative isoquinoline 1-oxidoreductase, alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D I596_2740 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D I596_3035 Aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D I596_844 Putative isoquinoline 1-oxidoreductase, beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D I596_2269 Putative membrane-bound aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D I596_1272 NADP oxidoreductase, coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D I596_1574 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D I596_2670 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D I596_338 Alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D I596_3521 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D I596_3520 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D I596_287 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D I596_1701 Sulfoxide reductase catalytic subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D I596_3585 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D I596_363 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D I596_2704 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D I596_168 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D I596_1543 Peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D I596_337 Alkyl hydroperoxide reductase protein C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D I596_1981 Osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D I596_2807 Dyp-type peroxidase family K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D I596_3587 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D I596_2017 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D I596_21 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D I596_2160 Cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D I596_1870 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D I596_846 Flavodoxin reductase family protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D I596_1835 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D I596_3074 Glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D I596_195 Arsenate reductase / phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D I596_3132 Pyrroloquinoline-quinone (PQQ) synthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D I596_2438 Protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D I596_2098 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D I596_1504 Cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D I596_3640 GCN5-like N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D I596_2745 Acetyltransferase, GNAT family K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D I596_2222 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D I596_1818 Leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D I596_2514 Transglutaminase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D I596_1420 Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D I596_2967 Putative glycosyl transferase K03692 E2.4.1.213; glucosylglycerol-phosphate synthase [EC:2.4.1.213] D I596_1591 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D I596_1867 Protein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D I596_2377 Thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D I596_1879 Putative phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D I596_59 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D I596_1035 Hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D I596_3303 bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D I596_1682 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D I596_2981 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D I596_3385 Putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D I596_2321 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D I596_130 Putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D I596_2355 Sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D I596_143 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D I596_3165 Hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D I596_1313 Penicillin-binding protein, beta-lactamase class C K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D I596_1423 Putative N-acetylmuramoyl-l-alanine amidase protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D I596_2087 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D I596_463 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D I596_1132 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D I596_2287 Septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D I596_2107 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D I596_2516 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D I596_2689 Carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D I596_1202 Methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D I596_619 Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D I596_771 UDP-N-acetylmuramate-L-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D I596_2766 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D I596_2382 Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D I596_881 Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE D I596_883 Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF K18929 lldF; L-lactate dehydrogenase complex protein LldF D I596_882 Putative L-lactate dehydrogenase, hypothetical protein subunit YkgG K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D I596_211 Formate dehydrogenase chain D K02379 fdhD; FdhD protein D I596_2700 Putative ferredoxin protein K05524 fdxA; ferredoxin D I596_2866 NapD family protein K02570 napD; periplasmic nitrate reductase NapD D I596_2867 Ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D I596_2868 Hypothetical protein K02571 napE; periplasmic nitrate reductase NapE D I596_888 Rieske (2Fe-2S) domain protein K15878 K15878; rieske iron-sulfur protein D I596_2863 Cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC D I596_2521 Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D I596_2568 Putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D I596_2874 Alanine racemase, N-terminal domain protein 2 K06997 yggS; PLP dependent protein D I596_706 Hypothetical protein K06997 yggS; PLP dependent protein D I596_2172 Acetyltransferase, ribosomal protein N-acetylase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D I596_1710 Hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D I596_1711 Putative N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B D I596_1456 Inner membrane protein YbhQ K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D I596_43 Putative enzyme of heme biosynthesis K02498 hemY; HemY protein D I596_3760 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein D I596_3759 Sterol-binding domain protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D I596_77 Hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism D I596_2317 Hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase D I596_987 NADPH:quinone oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D I596_3223 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D I596_2908 Hypothetical protein K15977 K15977; putative oxidoreductase D I596_241 DoxX family protein K15977 K15977; putative oxidoreductase D I596_3120 Hypothetical protein K15977 K15977; putative oxidoreductase D I596_525 Carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D I596_3274 Cold shock protein CspA K03704 cspA; cold shock protein D I596_3173 Cold shock protein CspE K03704 cspA; cold shock protein D I596_3213 Cold shock protein CspA K03704 cspA; cold shock protein D I596_50 Transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D I596_1648 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D I596_2138 Cell division trigger factor K03545 tig; trigger factor D I596_1700 Sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D I596_1989 Formate dehydrogenase formation protein FdhE K02380 fdhE; FdhE protein D I596_2555 SsrA-binding protein K03664 smpB; SsrA-binding protein D I596_78 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D I596_2413 Putative proteasome-type protease K07395 K07395; putative proteasome-type protease D I596_2591 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D I596_3034 Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor D I596_2455 Glutathione S-transferase, N-terminal domain K11208 yncG; GST-like protein C 99976 Replication and repair D I596_3007 Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D I596_2797 DNA repair protein RadC K03630 radC; DNA repair protein RadC D I596_3450 DNA repair protein RadC K03630 radC; DNA repair protein RadC D I596_1907 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D I596_643 Putative endonuclease K07460 yraN; putative endonuclease D I596_1290 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D I596_461 DNA protecting protein DprA K04096 smf; DNA processing protein D I596_1830 ATPase K07478 ycaJ; putative ATPase D I596_676 Transposase, IS5 family protein K07481 K07481; transposase, IS5 family D I596_295 Integrase, catalytic region K07482 K07482; transposase, IS30 family D I596_2993 Mobile element protein K07483 K07483; transposase D I596_482 Mobile element protein K07483 K07483; transposase D I596_1208 Transposase K07491 rayT; REP-associated tyrosine transposase D I596_1210 Transposase K07491 rayT; REP-associated tyrosine transposase D I596_180 Transposase IS3/IS911 family protein K07497 K07497; putative transposase D I596_2801 Integrase catalytic subunit K07497 K07497; putative transposase D I596_2848 Mobile element protein K07497 K07497; putative transposase D I596_179 Integrase catalytic subunit K07497 K07497; putative transposase D I596_1115 Mobile element protein K07497 K07497; putative transposase D I596_483 Mobile element protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D I596_965 Sulfur carrier protein adenylyltransferase ThiF K03972 pspE; phage shock protein E D I596_2428 Hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D I596_1909 Amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D I596_3470 Amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D I596_434 Amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D I596_2681 Putative transmembrane protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D I596_2034 Putative inner membrane protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D I596_1728 Major facilitator superfamily MFS_1 K03301 TC.AAA; ATP:ADP antiporter, AAA family D I596_1369 TGF-beta receptor type I/II extracellular region K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D I596_870 Amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D I596_3009 Phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D I596_1762 Sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D I596_2118 Nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D I596_2463 Allophanate hydrolase 2 subunit 1 K06351 kipI; inhibitor of KinA D I596_453 Peptidase M23B K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D I596_3323 Signaling modulator of AmpD, AmpE K03807 ampE; AmpE protein D I596_2486 GTP-binding elongation factor protein K06207 typA; GTP-binding protein D I596_3284 Phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D I596_2705 Putative phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase D I596_3763 Hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D I596_1823 Outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D I596_2656 Outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D I596_2672 Surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D I596_3160 Hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D I596_914 Putative outer membrane protein OmpH K06142 hlpA; outer membrane protein D I596_2096 Peptidase M23 K06194 nlpD; lipoprotein NlpD D I596_3523 Outer membrane protein W K07275 ompW; outer membrane protein D I596_521 Hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D I596_2513 Slp family outer membrane protein K07285 slp; outer membrane lipoprotein D I596_2585 Outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein D I596_977 Putative membrane protein K07340 ybbJ; inner membrane protein D I596_2726 ABC transporter permease K02005 ABC.CD.TX; HlyD family secretion protein D I596_803 Secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein D I596_306 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D I596_242 Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D I596_233 Cytochrome c-type biogenesis protein CcmI/CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D I596_234 Cytochrome C biogenesis protein ccmh K02200 ccmH; cytochrome c-type biogenesis protein CcmH D I596_1383 Membrane protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D I596_2572 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D I596_1737 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D I596_3333 BFD-like (2Fe-2S) binding domain superfamily protein K02192 bfd; bacterioferritin-associated ferredoxin D I596_1596 Protein ApaG K06195 apaG; ApaG protein D I596_1919 Putative exported protein K07231 K07231; putative iron-regulated protein D I596_1394 Copper resistance protein B CopB K07233 pcoB; copper resistance protein B D I596_3563 Hypothetical protein K21904 smtA; metallothionein B B 09194 Poorly characterized C 99996 General function prediction only D I596_3186 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D I596_35 Transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D I596_3135 Pyrroloquinoline-quinone (PQQ) synthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D I596_3133 Pyrroloquinoline-quinone (PQQ) synthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D I596_260 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D I596_1804 Export-related chaperone CsaA K06878 K06878; tRNA-binding protein D I596_1467 Patatin K07001 K07001; NTE family protein D I596_277 Patatin K07001 K07001; NTE family protein D I596_530 Putative Patatin K07001 K07001; NTE family protein D I596_812 Hydrolase, haloacid delahogenase-like family K07025 K07025; putative hydrolase of the HAD superfamily D I596_3325 Iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D I596_1857 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D I596_1860 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D I596_2666 UPF0761 membrane protein K07058 K07058; membrane protein D I596_2571 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE D I596_2289 Rhodanese domain protein K07146 K07146; UPF0176 protein D I596_1644 High frequency lysogenization protein HflD-like protein K07153 hflD; high frequency lysogenization protein D I596_1519 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein D I596_1214 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein D I596_1308 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein D I596_192 Arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D I596_62 LemA family protein K03744 lemA; LemA protein D I596_3337 LemA family protein K03744 lemA; LemA protein D I596_3352 LemA family protein K03744 lemA; LemA protein D I596_1185 SlyX family protein K03745 slyX; SlyX protein D I596_3187 Sporulation domain-containing protein K03749 dedD; DedD protein D I596_3464 Putative transmembrane protein K08983 K08983; putative membrane protein D I596_333 Putative integral membrane protein K08984 yjdF; putative membrane protein D I596_90 Hypothetical protein K09914 K09914; putative lipoprotein D I596_1030 Alkilphosphonate uptake protein K06193 phnA; protein PhnA C 99997 Function unknown D I596_2454 Ankrin repeat protein K06867 K06867; uncharacterized protein D I596_164 Ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D I596_2816 Ankrin repeat protein K06867 K06867; uncharacterized protein D I596_3351 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein D I596_2366 GTP-binding domain protein K06883 K06883; uncharacterized protein D I596_2814 Alpha/beta fold family hydrolase K06889 K06889; uncharacterized protein D I596_1513 Alpha/beta family hydrolase K06889 K06889; uncharacterized protein D I596_2227 Hypothetical protein K06889 K06889; uncharacterized protein D I596_2760 NUDIX hydrolase K06938 K06938; uncharacterized protein D I596_1298 Putative Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein D I596_3418 Putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein D I596_1032 Hypothetical protein K06940 K06940; uncharacterized protein D I596_744 Putative GTPase K06945 K06945; uncharacterized protein D I596_1039 Acetyltransferase-like protein K06975 K06975; uncharacterized protein D I596_1529 Acetyltransferase, GNAT family K06977 K06977; uncharacterized protein D I596_1255 Putative methyltransferase K06983 K06983; uncharacterized protein D I596_3801 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D I596_390 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D I596_2074 Putative exporter of the RND superfamily K07003 K07003; uncharacterized protein D I596_2209 Transporter K07003 K07003; uncharacterized protein D I596_3263 Extracellular nuclease K07004 K07004; uncharacterized protein D I596_172 Alpha/beta family hydrolase K07018 K07018; uncharacterized protein D I596_38 Putative hydrolase of the alpha/beta-hydrolase fold protein K07019 K07019; uncharacterized protein D I596_1518 Lactoylglutathione lyase GloA K07032 K07032; uncharacterized protein D I596_22 Hypothetical protein K07039 K07039; uncharacterized protein D I596_2180 Amidohydrolase 2 K07045 K07045; uncharacterized protein D I596_1506 Hypothetical protein K07093 K07093; uncharacterized protein D I596_1508 Hypothetical protein K07093 K07093; uncharacterized protein D I596_2786 Nuclear protein SET K07117 K07117; uncharacterized protein D I596_2299 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein D I596_644 Putative lipoprotein K07121 K07121; uncharacterized protein D I596_1871 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D I596_785 Hypothetical protein K07131 K07131; uncharacterized protein D I596_1931 Putative membrane protein K07136 K07136; uncharacterized protein D I596_2680 Putative Fe-S protein K07140 K07140; MOSC domain-containing protein D I596_770 Peptidase S16, lon domain-containing protein K07157 K07157; uncharacterized protein D I596_1332 Hypothetical protein K08998 K08998; uncharacterized protein D I596_2924 GatB-Yqey K09117 K09117; uncharacterized protein D I596_3064 Hypothetical protein K09158 K09158; uncharacterized protein D I596_2685 Hypothetical protein K09164 K09164; uncharacterized protein D I596_1501 Hypothetical protein K09164 K09164; uncharacterized protein D I596_3517 ATP/GTP-binding protein K09384 K09384; uncharacterized protein D I596_2590 Hypothetical protein K09705 K09705; uncharacterized protein D I596_1370 Hypothetical protein K09768 K09768; uncharacterized protein D I596_1840 YciL protein K09780 K09780; uncharacterized protein D I596_1029 Putative membrane protein K09781 K09781; uncharacterized protein D I596_2380 Membrane protein K09792 K09792; uncharacterized protein D I596_833 Putative membrane protein K09793 K09793; uncharacterized protein D I596_68 Hypothetical protein K09794 K09794; uncharacterized protein D I596_2553 Protein RnfH K09801 K09801; uncharacterized protein D I596_1082 Hypothetical protein K09895 K09895; uncharacterized protein D I596_163 YcgL domain-containing protein K09902 K09902; uncharacterized protein D I596_1186 Nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein D I596_269 DUF480 domain containing protein K09915 K09915; uncharacterized protein D I596_1819 Hypothetical protein K09919 K09919; uncharacterized protein D I596_1880 Hypothetical protein K09920 K09920; uncharacterized protein D I596_690 Hypothetical protein K09921 K09921; uncharacterized protein D I596_396 Hypothetical protein K09922 K09922; uncharacterized protein D I596_3176 DUF1006 domain containing protein K09927 K09927; uncharacterized protein D I596_1744 Hypothetical protein K09929 K09929; uncharacterized protein D I596_239 Hypothetical protein K09930 K09930; uncharacterized protein D I596_1745 Hypothetical protein K09930 K09930; uncharacterized protein D I596_1977 Hypothetical protein K09937 K09937; uncharacterized protein D I596_1850 Hypothetical protein K09938 K09938; uncharacterized protein D I596_1864 Putative membrane protein K09939 K09939; uncharacterized protein D I596_1721 Hypothetical protein K09940 K09940; uncharacterized protein D I596_4 Hypothetical protein K09946 K09946; uncharacterized protein D I596_1922 Tat pathway signal sequence domain-containing protein 18 K09947 K09947; uncharacterized protein D I596_1397 DUF1244 domain containing protein K09948 K09948; uncharacterized protein D I596_979 Hypothetical protein K09959 K09959; uncharacterized protein D I596_1279 Hypothetical protein K09962 K09962; uncharacterized protein D I596_2071 Histidine utilization protein HutD K09975 K09975; uncharacterized protein D I596_501 Hypothetical protein K09978 K09978; uncharacterized protein D I596_2450 Hypothetical protein K09983 K09983; uncharacterized protein D I596_259 Hypothetical protein K07502 yprB; uncharacterized protein D I596_3010 Hypothetical protein K07220 K07220; uncharacterized protein D I596_1049 Putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein D I596_1921 Imelysin K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024