+F Repair protein KO
#
DNA Repair and Recombination Proteins - Diospyros lotus (date-plum)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 127793832 DNA oxidative demethylase ALKBH2 isoform X1 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 127793113 DExH-box ATP-dependent RNA helicase DExH14 isoform X1 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 127813711 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 127809154 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 127790024 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 127805639 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 127804090 uncharacterized protein LOC127804090 isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 127811413 uncharacterized protein LOC127811413 isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 127798730 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 127790454 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 127811498 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 127804943 DNA-(apurinic or apyrimidinic site) endonuclease 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 127799508 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 127789108 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 127792615 uncharacterized protein LOC127792615 K03504 POLD3; DNA polymerase delta subunit 3
F 127797699 uncharacterized protein LOC127797699 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 127800417 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 127807777 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 127806430 DNA polymerase II subunit B4 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 127796457 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 127806128 LOW QUALITY PROTEIN: proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 127801230 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 127810658 flap endonuclease 1-like isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 127806982 DNA ligase 1-like isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 127795135 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 127795029 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 127788689 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 127786687 polynucleotide 3'-phosphatase ZDP-like K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 127792077 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 127787914 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 127786592 LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 127797371 poly [ADP-ribose] polymerase 2 isoform X1 K28005 PARP2; poly [ADP-ribose] polymerase 2 [EC:2.4.2.30]
E 127787243 protein ADP-ribosyltransferase PARP3 K10798 PARP3_4; protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 127804215 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 127795216 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 127797251 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 127806385 ubiquitin receptor RAD23c-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 127795893 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 127806936 RING-box protein 1a isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 127792943 cullin-4 K10609 CUL4; cullin 4
F 127794971 cullin-4-like K10609 CUL4; cullin 4
F 127793875 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 127798355 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 127794966 uncharacterized protein LOC127794966 K15082 RAD7; DNA repair protein RAD7
F 127792442 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 127807394 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 127791411 DNA-directed RNA polymerase II subunit RPB2-like K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 127795228 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 127812965 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 127807448 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 127812333 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 127788606 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 127805495 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 127797270 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 127798189 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 127801957 DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 127803067 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 127811539 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 127810894 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 127814050 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 127801030 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 127792193 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 127795893 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 127806936 RING-box protein 1a isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 127792943 cullin-4 K10609 CUL4; cullin 4
F 127794971 cullin-4-like K10609 CUL4; cullin 4
F 127793875 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 127800311 WD repeat-containing protein ATCSA-1-like K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 127786600 LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 127802803 UV-stimulated scaffold protein A homolog isoform X1 K23720 UVSSA; UV-stimulated scaffold protein A
F 127792620 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 127808979 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 127786870 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 127797575 general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 127811321 general transcription and DNA repair factor IIH subunit TFB1-3-like isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 127797536 general transcription factor IIH subunit 2 isoform X1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 127807330 general transcription and DNA repair factor IIH subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 127795231 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 127813855 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 127792876 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 127812552 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
E 127806150 uncharacterized protein LOC127806150 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 127789741 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 127806653 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 127813578 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 127787011 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 127806286 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 127789697 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 127802537 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 127813673 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 127803182 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 127806982 DNA ligase 1-like isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 127795046 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 127788650 protein CIA1 isoform X1 K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1
E 127804935 protein AE7-like 1 K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 127807885 protein AE7-like K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 127808115 protein AE7-like isoform X1 K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 127797865 cullin-3A K03869 CUL3; cullin 3
E 127799278 cullin-3A-like K03869 CUL3; cullin 3
E 127798502 elongin-C isoform X1 K03872 ELOC; elongin-C
E 127793882 LOW QUALITY PROTEIN: polyubiquitin 9 K03873 ELOB; elongin-B
E 127791777 uncharacterized protein LOC127791777 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 127793063 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 127809223 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 127795079 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 127808162 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 127807376 DNA mismatch repair protein MLH1 isoform X1 K08734 MLH1; DNA mismatch repair protein MLH1
E 127788374 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 127803833 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 127799508 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 127789108 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 127792615 uncharacterized protein LOC127792615 K03504 POLD3; DNA polymerase delta subunit 3
E 127797699 uncharacterized protein LOC127797699 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 127789741 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 127806653 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 127813578 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 127787011 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 127806286 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 127789697 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 127797113 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 127808820 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 127812525 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 127801425 uncharacterized protein LOC127801425 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 127804952 uncharacterized protein LOC127804952 K10756 RFC3_5; replication factor C subunit 3/5
E 127806229 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 127808120 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 127796457 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 127806128 LOW QUALITY PROTEIN: proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 127792865 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 127795886 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 127806982 DNA ligase 1-like isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 127805859 DNA damage-binding protein CMR1 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 127797019 LOW QUALITY PROTEIN: double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 127797084 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 127811496 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 127799946 nibrin homolog K10867 NBN; nibrin
D BRCA1-core complex
E 127792827 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 127796574 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 127813740 uncharacterized protein LOC127813740 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 127794492 uncharacterized protein LOC127794492 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 127808030 uncharacterized protein LOC127808030 isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 127795970 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 127796366 LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 127808852 uncharacterized protein LOC127808852 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 127797019 LOW QUALITY PROTEIN: double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 127797084 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 127811496 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 127799946 nibrin homolog K10867 NBN; nibrin
D BRCA complex
E 127787951 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 127806133 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 127806133 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 127797313 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 127793043 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 127807484 DNA repair protein RAD51 homolog 4 isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 127799908 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 127806233 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 127800644 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 127797685 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 127797945 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 127802092 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 127802093 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 127802817 SNF2 domain-containing protein CLASSY 4-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 127805756 protein CHROMATIN REMODELING 35 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 127806061 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 127801689 ATP-dependent DNA helicase Q-like 1 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 127812977 ATP-dependent DNA helicase Q-like 2 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 127801992 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 127794382 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 127810550 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 127810646 ATP-dependent DNA helicase Q-like 5 isoform X1 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 127794382 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 127810550 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 127799127 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 127804120 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 127794595 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 127799226 uncharacterized protein LOC127799226 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
E 127811234 uncharacterized protein LOC127811234 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 127789741 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 127806653 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 127813578 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 127787011 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 127806286 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 127789697 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 127791789 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 127787213 uncharacterized protein LOC127787213 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 127800020 uncharacterized protein LOC127800020 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 127811543 uncharacterized protein LOC127811543 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 127809898 uncharacterized protein LOC127809898 K19022 AP5B1; AP-5 complex subunit beta-1
E 127800369 AP-5 complex subunit mu isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
E 127792641 uncharacterized protein LOC127792641 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 127802063 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 127789285 structural maintenance of chromosomes protein 6B-like isoform X1 K22804 SMC6; structural maintenance of chromosomes protein 6
E 127809770 uncharacterized protein LOC127809770 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 127791441 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 127787911 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 127800658 crossover junction endonuclease EME1B-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 127787952 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 127787171 structure-specific endonuclease subunit slx1 isoform X1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 127798127 uncharacterized protein LOC127798127 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 127787389 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 127809247 single-strand DNA endonuclease 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 127804771 uncharacterized protein LOC127804771 isoform X1 K19026 SPG11; spatacsin
E 127813651 uncharacterized protein LOC127813651 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 127799187 protein MRG1-like isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 127803248 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 127788362 uncharacterized protein LOC127788362 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 127799470 uncharacterized protein LOC127799470 isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 127804027 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 127807098 uncharacterized protein LOC127807098 isoform X1 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 127794153 uncharacterized protein LOC127794153 K27803 HROB; homologous recombination OB-fold protein
E 127789302 probable DNA helicase MCM8 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 127801814 probable DNA helicase MCM9 isoform X1 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E 127808873 uncharacterized protein LOC127808873 isoform X1 K15047 HNRNPUL1; heterogeneous nuclear ribonucleoprotein U-like protein 1
E 127808341 uncharacterized protein LOC127808341 K28623 MRNIP; MRN complex-interacting protein
E 127810986 3'-5' exonuclease isoform X1 K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 127790780 uncharacterized protein LOC127790780 isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 127793935 DNA-dependent metalloprotease WSS1-like isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 127812234 uncharacterized protein LOC127812234 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 127797917 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 127800033 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 127789147 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 127802691 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 127797019 LOW QUALITY PROTEIN: double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 127797084 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 127811496 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 127805885 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 127810963 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 127787914 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 127788689 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 127795991 uncharacterized protein LOC127795991 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 127801613 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 127804229 uncharacterized protein LOC127804229 isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 127808204 LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase FANCM K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 127795114 protein MHF2 homolog isoform X1 K15360 STRA13; centromere protein X
E 127788129 uncharacterized protein LOC127788129 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
E 127813555 uncharacterized protein LOC127813555 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 127794382 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 127810550 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 127799127 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 127804120 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 127794595 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 127799226 uncharacterized protein LOC127799226 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
E 127811234 uncharacterized protein LOC127811234 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 127802435 uncharacterized protein LOC127802435 K10891 FANCD2; fanconi anemia group D2 protein
E 127810908 uncharacterized protein LOC127810908 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 127787951 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 127808030 uncharacterized protein LOC127808030 isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 127799988 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 127806133 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 127793043 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 127795278 uncharacterized protein LOC127795278 isoform X1 K11137 TELO2; telomere length regulation protein
E 127801914 uncharacterized protein LOC127801914 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 127795139 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 127792962 LOW QUALITY PROTEIN: uncharacterized protein LOC127792962 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 127794021 uncharacterized protein LOC127794021 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 127796751 uncharacterized protein LOC127796751 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 127805995 uncharacterized protein LOC127805995 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 127807682 uncharacterized protein LOC127807682 isoform X1 K23314 WRAP53; telomerase Cajal body protein 1
E 127814176 uncharacterized protein LOC127814176 K24752 WDR70; WD repeat-containing protein 70
E 127805859 DNA damage-binding protein CMR1 K24755 WDR76; WD repeat-containing protein 76
E 127787175 uncharacterized protein LOC127787175 K28434 HMCES; abasic site processing protein HMCES
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 127808612 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 127813641 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 127803630 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 127801440 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 127789043 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 127789933 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 127799919 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 127803682 ubiquitin-conjugating enzyme E2 2-like isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 127811933 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 127813541 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 127788822 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 127797647 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 127810352 LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1B-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 127812631 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 127813443 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 127792001 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 127792088 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 127796457 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 127806128 LOW QUALITY PROTEIN: proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 127801143 uncharacterized protein LOC127801143 isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 127795178 checkpoint protein hus1 K10903 HUS1; HUS1 checkpoint protein
D 127788286 uncharacterized protein LOC127788286 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 127803461 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 127808820 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 127812525 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 127801425 uncharacterized protein LOC127801425 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 127804952 uncharacterized protein LOC127804952 K10756 RFC3_5; replication factor C subunit 3/5
D 127806229 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 127808120 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 127788286 uncharacterized protein LOC127788286 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 127793960 uncharacterized protein LOC127793960 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 127810615 uncharacterized protein LOC127810615 isoform X1 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 127795278 uncharacterized protein LOC127795278 isoform X1 K11137 TELO2; telomere length regulation protein
D 127791774 uncharacterized protein LOC127791774 isoform X1 K20403 TTI1; TELO2-interacting protein 1
D 127798111 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 127806194 protein GET4 isoform X1 K23387 GET4; golgi to ER traffic protein 4
C SOSS complex
D 127789144 uncharacterized protein LOC127789144 isoform X1 K13140 INTS3; integrator complex subunit 3 (SOSS complex subunit A)
D 127814227 uncharacterized protein LOC127814227 K28889 NABP; SOSS complex subunit B
C Other check point factors
D 127801498 LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 127794269 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 127791667 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 127792000 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 127792060 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 127797226 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 127799412 14-3-3 protein 10 K06630 YWHAE; 14-3-3 protein epsilon
D 127799447 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 127802903 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 127803215 14-3-3 protein 1-like K06630 YWHAE; 14-3-3 protein epsilon
D 127803398 14-3-3-like protein GF14 psi isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 127804172 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 127804291 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 127804753 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 127808090 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 127808303 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 127810378 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 127810380 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 127811510 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 127797386 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 127799363 uncharacterized protein LOC127799363 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 127786501 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 127789027 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 127789534 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 127797156 serine/threonine-protein kinase Nek5-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 127801644 serine/threonine-protein kinase Nek2-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 127804426 serine/threonine-protein kinase Nek5-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 127805771 uncharacterized protein LOC127805771 K22422 DONSON; protein downstream neighbor of Son
D 127797121 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 127809836 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 127787376 uncharacterized protein LOC127787376 K25059 SDE2; replication stress response regulator SDE2
D 127807633 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 127812873 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 127801057 uncharacterized protein LOC127801057 isoform X1 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 127810238 uncharacterized protein LOC127810238 isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 127804860 uncharacterized protein LOC127804860 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 127813912 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 127812256 uncharacterized protein LOC127812256 isoform X1 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 127797623 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 127786696 uncharacterized protein LOC127786696 isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 127793271 uncharacterized protein LOC127793271 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 127806648 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 127807898 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 127807899 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 127811428 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 127811730 pre-mRNA-processing factor 19 homolog 1-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 127797182 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 127793266 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 127799473 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 127806473 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 127800509 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 127803541 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 127803542 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 127803543 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 127803544 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 127796015 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 127800781 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 127813711 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 127809154 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 127804614 alkylbase DNA glycosidase-like protein mag2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 127808075 DNA-3-methyladenine glycosylase-like isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 127790024 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 127805639 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 127790059 uncharacterized protein LOC127790059 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 127790973 uncharacterized protein LOC127790973 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 127793899 uncharacterized protein LOC127793899 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 127797766 uncharacterized protein LOC127797766 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 127798785 uncharacterized protein LOC127798785 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 127806847 uncharacterized protein LOC127806847 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 127790955 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 127790454 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 127811498 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 127788557 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 127811873 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 127811873 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 28482445 rpoB; (RefSeq) RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 28482443 rpoC2; (RefSeq) RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 28482444 rpoC1; (RefSeq) RNA polymerase beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 28482502 rpoA; (RefSeq) RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 127808411 uncharacterized protein LOC127808411 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 127793863 single-stranded DNA-binding protein, mitochondrial isoform X1 K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 127795557 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 127812002 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 127795557 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 127812002 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 127795430 uncharacterized protein LOC127795430 isoform X1 K04485 radA; DNA repair protein RadA/Sms
E 127796823 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 127801278 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 127788562 DNA gyrase subunit B, chloroplastic/mitochondrial isoform X1 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 127794709 uncharacterized protein LOC127794709 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 127795557 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 127812002 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D 127793863 single-stranded DNA-binding protein, mitochondrial isoform X1 K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 127806473 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 127800509 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2026