+D GENES KO #

  KEGG Orthology (KO) - Dehalogenimonas lykanthroporepellens

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dly00010] D Dehly_1365 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Dehly_1064 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dehly_1005 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dehly_0699 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dehly_0863 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dehly_0804 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Dehly_0700 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dehly_0045 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dehly_0861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dehly_0947 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dehly_0790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dehly_0331 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dehly_0332 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00020 Citrate cycle (TCA cycle) [PATH:dly00020] D Dehly_1331 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Dehly_0358 Isocitrate dehydrogenase (NAD(+)) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Dehly_0331 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dehly_0332 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dehly_0360 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dehly_0361 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dehly_0029 Carbamoyl-phosphate synthase L chain ATP-binding protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Dehly_0355 Conserved carboxylase region K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:dly00030] D Dehly_1064 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dehly_0889 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Dehly_0590 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dehly_0592 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dehly_1437 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Dehly_0664 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dehly_0591 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dehly_1132 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Dehly_0890 Alcohol dehydrogenase GroES domain protein K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D Dehly_0560 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Dehly_1005 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:dly00040] D Dehly_1290 short-chain dehydrogenase/reductase SDR K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Dehly_1366 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dehly_0590 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dehly_1376 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:dly00051] D Dehly_1064 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dehly_1003 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Dehly_1376 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Dehly_0877 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dehly_1005 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dehly_0699 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dehly_0664 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dehly_0591 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:dly00052] D Dehly_1366 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dehly_1365 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dehly_1218 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:dly00500] D Dehly_1366 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dehly_0958 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Dehly_0957 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Dehly_0595 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Dehly_0596 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Dehly_0888 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Dehly_1365 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Dehly_1064 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dly00520] D Dehly_0585 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dehly_0583 Nucleotidyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dehly_1365 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Dehly_1366 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dehly_1064 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Dehly_1003 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Dehly_0958 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:dly00620] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dehly_0331 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dehly_0332 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dehly_0947 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dehly_0416 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Dehly_0769 putative metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Dehly_0029 Carbamoyl-phosphate synthase L chain ATP-binding protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Dehly_0355 Conserved carboxylase region K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dehly_0360 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dehly_0361 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dehly_0790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dehly_0669 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Dehly_0674 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dly00630] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dehly_0559 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1485 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1131 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dehly_0560 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Dehly_0033 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dehly_0034 molybdopterin oxidoreductase Fe4S4 region K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dehly_0443 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dehly_0032 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dehly_0444 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dehly_0027 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dehly_0859 Arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D Dehly_1026 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:dly00640] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dehly_1317 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:dly00650] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dehly_0331 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dehly_0332 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dehly_0666 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dehly_0667 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:dly00660] D Dehly_0666 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dehly_0667 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dehly_0671 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0356 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0672 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0357 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0673 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dly00562] D Dehly_0526 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Dehly_0699 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dly00190] D Dehly_0831 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Dehly_0832 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Dehly_0833 NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Dehly_0834 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Dehly_0229 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Dehly_0625 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Dehly_0228 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Dehly_0835 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Dehly_0839 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Dehly_0840 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Dehly_0841 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Dehly_0838 NADH-ubiquinone oxidoreductase chain 4L K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2] D Dehly_0836 4Fe-4S ferredoxin iron-sulfur binding domain protein K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2] D Dehly_0623 ferredoxin K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Dehly_0549 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Dehly_0551 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Dehly_0550 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Dehly_0548 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Dehly_0552 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Dehly_0545 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dehly_0547 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Dehly_0546 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Dehly_0581 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:dly00710] D Dehly_0863 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dehly_0804 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Dehly_0592 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dehly_0664 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dehly_0591 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dehly_0699 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dehly_0590 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dehly_1437 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:dly00720] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dehly_0790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dehly_0029 Carbamoyl-phosphate synthase L chain ATP-binding protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Dehly_0355 Conserved carboxylase region K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dehly_0360 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dehly_0361 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dehly_0331 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Dehly_0332 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Dehly_0227 formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D Dehly_0151 FAD dependent oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D Dehly_1357 4Fe-4S ferredoxin iron-sulfur binding domain protein K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D Dehly_0812 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dehly_0815 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dehly_0458 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Dehly_0819 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dehly_0992 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dehly_0817 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169] D Dehly_0818 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dehly_0816 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:dly00680] D Dehly_0033 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dehly_0034 molybdopterin oxidoreductase Fe4S4 region K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dehly_0443 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dehly_0032 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dehly_0444 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dehly_0027 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dehly_0227 formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D Dehly_0151 FAD dependent oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D Dehly_1357 4Fe-4S ferredoxin iron-sulfur binding domain protein K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] D Dehly_0818 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dehly_0816 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D Dehly_0992 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dehly_1131 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dehly_0560 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Dehly_0861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dehly_1005 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dehly_0725 hydrogenase maturation protease K00442 frhD; coenzyme F420 hydrogenase subunit delta D Dehly_0730 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dehly_0707 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dehly_0731 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dehly_0732 putative heterodisulfide reductase, C subunit K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Dehly_0729 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Dehly_0726 nickel-dependent hydrogenase large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D Dehly_0727 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Dehly_0790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dehly_0700 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dehly_0045 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dehly_0744 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00910 Nitrogen metabolism [PATH:dly00910] D Dehly_0055 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Dehly_0883 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Dehly_0559 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1485 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1208 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dehly_1580 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dly00920] D Dehly_1592 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dehly_1593 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dehly_1594 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dehly_0131 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Dehly_0382 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Dehly_0384 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dly00061] D Dehly_0305 acyl carrier protein K02078 acpP; acyl carrier protein D Dehly_0302 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dehly_0979 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dehly_0303 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dehly_0798 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D Dehly_0798 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:dly00074] D Dehly_0226 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Dehly_0305 acyl carrier protein K02078 acpP; acyl carrier protein D Dehly_0302 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dly00561] D Dehly_0560 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Dehly_0638 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Dehly_1383 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0111 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0981 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0012 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0259 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0238 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Dehly_0796 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] C 00564 Glycerophospholipid metabolism [PATH:dly00564] D Dehly_0112 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Dehly_1383 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0111 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0981 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0012 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0259 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0238 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Dehly_0199 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dly00230] D Dehly_0365 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Dehly_1132 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Dehly_0397 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dehly_1631 glucosamine 6-phosphate synthetase-like protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dehly_0660 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Dehly_0686 formyl transferase domain protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Dehly_1201 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dehly_1202 phosphoribosylformylglycinamidine synthase II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D Dehly_0659 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Dehly_0657 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Dehly_0658 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dehly_1425 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dehly_0615 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dehly_0777 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Dehly_0137 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Dehly_1125 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dehly_1004 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Dehly_0662 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Dehly_0085 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Dehly_0719 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dehly_1284 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dehly_0791 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Dehly_0316 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Dehly_1359 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Dehly_0529 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Dehly_0776 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Dehly_0010 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Dehly_1076 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dehly_0288 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dehly_0046 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dehly_0144 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] C 00240 Pyrimidine metabolism [PATH:dly00240] D Dehly_0915 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dehly_0914 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dehly_0912 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Dehly_0913 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Dehly_0067 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Dehly_0916 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Dehly_0892 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Dehly_0004 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Dehly_1018 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Dehly_1125 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dehly_0046 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dehly_1436 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Dehly_0615 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dehly_0911 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Dehly_0010 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Dehly_0719 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dehly_1284 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dehly_1230 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Dehly_0875 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Dehly_1214 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Dehly_0677 thymidylate synthase, putative K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Dehly_1032 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dly00250] D Dehly_1113 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Dehly_0919 Ornithine cyclodeaminase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] D Dehly_0932 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dehly_0933 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dehly_0529 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Dehly_0658 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dehly_0912 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Dehly_1208 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dehly_0559 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1485 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_0915 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dehly_0914 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dehly_1201 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dehly_0585 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dehly_0397 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dehly_1631 glucosamine 6-phosphate synthetase-like protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dly00260] D Dehly_0042 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dehly_0532 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dehly_0961 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dehly_0962 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Dehly_1315 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Dehly_1131 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dehly_0560 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Dehly_0700 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dehly_0045 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dehly_0744 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dehly_0500 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Dehly_0499 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dehly_0648 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dehly_1307 diaminobutyrate/2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Dehly_1306 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D Dehly_1308 Ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:dly00270] D Dehly_0131 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Dehly_0382 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Dehly_0142 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dehly_1062 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Dehly_1057 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Dehly_1056 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Dehly_0644 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D Dehly_1061 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dehly_0042 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dehly_0532 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dehly_0961 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dehly_0384 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Dehly_0385 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Dehly_1382 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dehly_0359 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dehly_0236 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Dehly_1596 Pyridoxal-5'-phosphate-dependent protein beta subunit K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Dehly_0744 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:dly00280] D Dehly_1382 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dly00290] D Dehly_0671 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0356 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0672 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0357 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dehly_0673 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Dehly_0666 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dehly_0667 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dehly_0668 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Dehly_0665 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dehly_1382 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dehly_0669 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Dehly_0674 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dly00300] D Dehly_0961 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dehly_0042 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dehly_0532 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dehly_0531 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Dehly_0533 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Dehly_0924 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Dehly_0697 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Dehly_0696 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dehly_0692 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00310 Lysine degradation D Dehly_0994 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:dly00220] D Dehly_0109 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Dehly_0932 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dehly_0933 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dehly_1201 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dehly_0559 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1485 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_0915 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dehly_0914 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dehly_0366 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Dehly_0926 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Dehly_0925 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Dehly_1121 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Dehly_0924 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:dly00330] D Dehly_1000 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Dehly_1144 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Dehly_0308 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Dehly_0299 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:dly00340] D Dehly_0653 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Dehly_1138 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Dehly_1137 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Dehly_0991 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Dehly_0988 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Dehly_0656 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Dehly_0655 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dehly_0654 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism D Dehly_0655 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism D Dehly_0655 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:dly00380] D Dehly_0859 Arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dly00400] D Dehly_0225 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dehly_0136 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dehly_0224 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Dehly_0115 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Dehly_0223 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Dehly_0222 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Dehly_0221 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Dehly_0220 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Dehly_0219 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Dehly_0494 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dehly_0495 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Dehly_0496 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Dehly_0498 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Dehly_0497 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Dehly_0500 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Dehly_0499 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dehly_0648 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dehly_0218 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Dehly_0217 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Dehly_1488 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Dehly_0655 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dly00410] D Dehly_0613 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Dehly_0611 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D Dehly_0919 Ornithine cyclodeaminase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:dly00450] D Dehly_0142 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dehly_0637 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Dehly_1500 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Dehly_1501 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Dehly_1271 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D Dehly_1131 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dly00470] D Dehly_0995 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dehly_1201 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Dehly_0697 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Dehly_0692 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:dly00480] D Dehly_0800 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Dehly_0889 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:dly00515] D Dehly_1537 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:dly00514] D Dehly_1537 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dly00541] D Dehly_1366 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dehly_0584 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Dehly_0583 Nucleotidyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:dly00550] D Dehly_0995 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dehly_0200 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dly00543] D Dehly_0131 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dly00730] D Dehly_0872 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Dehly_0381 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dehly_0702 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Dehly_0766 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Dehly_0248 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Dehly_1128 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Dehly_1316 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dehly_1076 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dehly_0288 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dly00740] D Dehly_0514 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dehly_0516 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Dehly_0513 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Dehly_0515 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Dehly_0741 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Dehly_0365 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:dly00750] D Dehly_0962 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Dehly_0205 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Dehly_0745 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:dly00760] D Dehly_1113 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Dehly_0133 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Dehly_1112 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Dehly_1424 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Dehly_0615 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dehly_1340 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Dehly_0046 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dehly_0763 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Dehly_0297 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Dehly_0367 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:dly00770] D Dehly_0666 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dehly_0667 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dehly_0668 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Dehly_0665 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dehly_0612 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Dehly_0611 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Dehly_0250 transcriptional activator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Dehly_0251 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Dehly_0046 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Dehly_1146 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Dehly_0346 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Dehly_0226 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Dehly_1382 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dehly_0613 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:dly00780] D Dehly_0979 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dehly_0303 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dehly_0846 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:dly00790] D Dehly_0964 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Dehly_1316 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dehly_0007 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Dehly_0006 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Dehly_1719 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Dehly_0514 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dehly_1457 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Dehly_0478 beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Dehly_0801 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dehly_0802 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Dehly_0641 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Dehly_0642 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Dehly_0414 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dly00670] D Dehly_0812 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dehly_0815 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dehly_1131 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dehly_0686 formyl transferase domain protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Dehly_1425 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dehly_1722 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Dehly_0677 thymidylate synthase, putative K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Dehly_1032 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Dehly_1026 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Dehly_0458 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dly00860] D Dehly_0104 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dehly_0453 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Dehly_0457 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Dehly_0456 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Dehly_0454 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Dehly_0850 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Dehly_0455 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Dehly_0452 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Dehly_0451 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Dehly_0449 Radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase D Dehly_0450 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Dehly_0579 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Dehly_0610 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Dehly_0580 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dehly_1006 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dehly_0845 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Dehly_0714 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Dehly_0709 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Dehly_0711 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Dehly_0712 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Dehly_0710 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dly00130] D Dehly_0113 Methyltransferase type 11 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Dehly_0114 Methyltransferase type 11 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Dehly_0116 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Dehly_1023 conserved hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dly00900] D Dehly_0702 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Dehly_0197 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Dehly_1711 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Dehly_1513 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Dehly_1710 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Dehly_0195 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Dehly_0237 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Dehly_0200 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Dehly_0592 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Dehly_0584 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:dly00332] D Dehly_0308 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Dehly_0299 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dly00261] D Dehly_0042 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dehly_0532 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dehly_0531 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Dehly_0533 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dly00521] D Dehly_1365 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Dehly_0526 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Dehly_0584 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Dehly_1365 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Dehly_0584 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis [PATH:dly00401] D Dehly_0217 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Dehly_0655 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Dehly_0494 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dehly_0495 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Dehly_0302 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dehly_0303 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Dehly_0305 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:dly00999] D Dehly_1062 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Dehly_0222 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D Dehly_0416 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:dly00633] D Dehly_0026 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dehly_1287 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dehly_0992 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dehly_0627 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Dehly_0626 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Dehly_0629 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Dehly_0628 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dly03020] D Dehly_0740 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dehly_0739 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dehly_1069 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dly03010] D Dehly_1016 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Dehly_1091 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Dehly_1070 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Dehly_1080 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Dehly_0755 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Dehly_1100 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Dehly_1083 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Dehly_1065 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Dehly_1098 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Dehly_1071 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Dehly_1101 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Dehly_1072 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Dehly_1084 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Dehly_0535 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Dehly_0554 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Dehly_1088 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Dehly_0753 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Dehly_1093 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Dehly_0002 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Dehly_0099 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Dehly_0342 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Dehly_1094 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Dehly_1097 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Dehly_1096 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Dehly_1085 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Dehly_1082 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Dehly_0344 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Dehly_0636 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Dehly_0343 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Dehly_0341 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Dehly_1066 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Dehly_1087 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Dehly_1078 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Dehly_1090 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Dehly_1068 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Dehly_1081 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Dehly_1472 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Dehly_0821 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Dehly_0201 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Dehly_1092 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Dehly_1095 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Dehly_1086 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Dehly_1387 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Dehly_0202 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Dehly_0934 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Dehly_1089 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Dehly_1079 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Dehly_0203 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Dehly_0301 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Dehly_0752 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Dehly_0822 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Dehly_1073 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Dehly_R0011 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dehly_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dehly_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dly00970] D Dehly_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dehly_R0042 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dehly_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dehly_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0021 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dehly_R0027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dehly_R0044 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Dehly_R0015 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dehly_R0033 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dehly_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dehly_R0040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dehly_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dehly_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dehly_R0045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dehly_R0013 tRNA-His K14226 tRNA-His; tRNA His D Dehly_R0012 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dehly_R0043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dehly_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dehly_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met D Dehly_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D Dehly_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Dehly_R0031 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dehly_R0002 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dehly_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dehly_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dehly_R0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dehly_R0041 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dehly_R0010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dehly_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Dehly_R0009 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dehly_R0001 tRNA-Val K14237 tRNA-Val; tRNA Val D Dehly_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val D Dehly_R0003 tRNA-Val K14237 tRNA-Val; tRNA Val D Dehly_R0051 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Dehly_0104 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dehly_1039 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Dehly_1476 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dehly_1038 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dehly_1367 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dehly_0682 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dehly_0772 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dehly_0824 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dehly_0621 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dehly_1501 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Dehly_1709 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dehly_1271 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dehly_1722 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Dehly_1035 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dehly_1143 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dehly_0746 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dehly_0620 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dehly_1020 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dehly_0193 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dehly_0652 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dehly_1372 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dehly_1236 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dehly_1235 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dehly_0742 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dehly_1025 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dly03060] D Dehly_1077 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dehly_0339 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dehly_1475 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dehly_1468 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Dehly_1467 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Dehly_1114 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dehly_0213 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dehly_1466 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dehly_0851 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1346 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1347 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1348 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1349 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Dehly_0893 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dehly_0107 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dly04122] D Dehly_0381 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dehly_1597 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Dehly_0024 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Dehly_0801 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dehly_0802 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Dehly_0641 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:dly03018] D Dehly_0861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dehly_0534 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dehly_1167 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Dehly_0318 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dehly_1439 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Dehly_1343 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Dehly_0210 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dehly_0057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dehly_1407 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dehly_1469 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dly03030] D Dehly_0536 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Dehly_1577 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dehly_0465 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dehly_0693 DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dehly_1505 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dehly_0949 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1187 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_0635 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dehly_0792 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Dehly_1689 DNA primase catalytic core domain protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Dehly_0754 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dehly_0126 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Dehly_0764 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Dehly_0095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dehly_0651 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dly03410] D Dehly_0844 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Dehly_0097 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dehly_0211 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Dehly_1123 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dehly_0095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dehly_0980 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dehly_0651 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dly03420] D Dehly_0632 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Dehly_0797 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Dehly_1052 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Dehly_0938 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Dehly_0900 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dehly_0095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dehly_0651 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dehly_1691 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] C 03430 Mismatch repair [PATH:dly03430] D Dehly_0941 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Dehly_0756 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Dehly_0470 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Dehly_0900 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dehly_0980 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dehly_0754 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dehly_1577 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dehly_0949 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1187 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_0465 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dehly_1505 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dehly_0693 DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dehly_0536 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Dehly_0651 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:dly03440] D Dehly_0980 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dehly_0754 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dehly_0459 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Dehly_0463 recombination protein RecR K06187 recR; recombination protein RecR D Dehly_1345 recA protein K03553 recA; recombination protein RecA D Dehly_0095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dehly_1142 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Dehly_0738 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dehly_0208 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Dehly_0937 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dehly_1690 UvrD/REP helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Dehly_1577 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dehly_0949 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1187 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_0465 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dehly_1505 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dehly_0693 DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dehly_0536 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Dehly_1471 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dly02010] D Dehly_0970 ABC transporter tungsten-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Dehly_0971 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Dehly_0972 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Dehly_1592 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dehly_1593 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dehly_1594 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dehly_0376 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Dehly_0377 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Dehly_0378 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Dehly_0909 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Dehly_0906 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Dehly_0908 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Dehly_0907 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Dehly_1318 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dehly_1320 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Dehly_1321 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Dehly_1322 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Dehly_1452 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Dehly_1453 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Dehly_1455 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dehly_1456 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dehly_0558 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dehly_1243 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Dehly_1242 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Dehly_1241 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dehly_1244 conserved hypothetical protein K16915 cbiL; nickel transport protein D Dehly_0511 BioY protein K03523 bioY; biotin transport system substrate-specific component D Dehly_0440 cytochrome c assembly protein K02195 ccmC; heme exporter protein C D Dehly_0439 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Dehly_0438 ABC transporter related protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:dly03070] D Dehly_1221 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Dehly_1468 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Dehly_1467 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Dehly_0339 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dehly_1475 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dehly_1077 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dehly_1114 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dehly_0213 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dehly_0851 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1346 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1347 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1348 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1349 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:dly02020] D Dehly_1190 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dehly_1314 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dehly_0016 response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dehly_0985 putative two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dehly_1316 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dehly_1318 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dehly_0895 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_1022 serine protease, DegP K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_0482 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_1547 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_1149 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dehly_0866 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Dehly_0999 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Dehly_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Dehly_1220 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Dehly_1140 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR D Dehly_0878 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Dehly_0559 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1485 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_0161 general secretion family protein K02650 pilA; type IV pilus assembly protein PilA D Dehly_0171 general secretion K02650 pilA; type IV pilus assembly protein PilA D Dehly_0026 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dehly_1287 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dehly_0598 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dehly_1336 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dehly_0920 PAS/PAC sensor signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dly02024] D Dehly_0494 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dehly_0495 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Dehly_1149 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dehly_1452 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Dehly_1453 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Dehly_1455 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dehly_1456 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dehly_0798 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dehly_0598 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dehly_1336 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dehly_0516 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Dehly_0558 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dehly_1218 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D Dehly_0339 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dehly_1475 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dehly_1077 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dehly_1114 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dehly_0213 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dehly_1220 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D Dehly_0793 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Dehly_0861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance D Dehly_0558 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein C 01502 Vancomycin resistance [PATH:dly01502] D Dehly_0995 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] C 01503 Cationic antimicrobial peptide (CAMP) resistance D Dehly_0895 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_1022 serine protease, DegP K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dly01000] C 01001 Protein kinases [BR:dly01001] D Dehly_1190 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dehly_1314 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dehly_0482 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_1547 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_0295 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Dehly_0920 PAS/PAC sensor signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:dly01009] D Dehly_1061 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:dly01002] D Dehly_0107 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Dehly_1130 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dehly_0411 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Dehly_1289 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Dehly_0662 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Dehly_0397 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dehly_1631 glucosamine 6-phosphate synthetase-like protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dehly_0585 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dehly_0868 hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG D Dehly_0800 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Dehly_1075 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Dehly_0688 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Dehly_0286 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Dehly_1122 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dehly_1170 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Dehly_0196 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Dehly_0895 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_1022 serine protease, DegP K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_0684 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Dehly_1623 ATP-dependent Lon-type protease-like protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Dehly_1700 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Dehly_1375 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Dehly_0425 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Dehly_0893 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dehly_0796 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D Dehly_1237 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Dehly_0372 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein C 01003 Glycosyltransferases [BR:dly01003] D Dehly_0597 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Dehly_1537 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Dehly_0527 glycosyl transferase group 1 K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D Dehly_0957 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Dehly_0877 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dly01011] D Dehly_0995 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dehly_0868 hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG C 01004 Lipid biosynthesis proteins [BR:dly01004] D Dehly_0302 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dehly_0979 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dehly_0303 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dehly_1002 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dehly_0798 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dehly_0638 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Dehly_1383 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0111 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0981 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0012 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0259 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dehly_0238 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:dly01006] D Dehly_0200 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dehly_0698 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Dehly_0116 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:dly01007] D Dehly_0104 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dehly_0742 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dehly_1025 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dehly_1709 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dehly_1020 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dehly_1271 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dehly_0746 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dehly_1035 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dehly_1143 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dehly_0620 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dehly_0682 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dehly_0652 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dehly_1372 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dehly_0772 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dehly_0621 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dehly_0193 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dehly_0824 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dehly_1367 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dehly_1236 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dehly_1235 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dehly_0696 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dehly_1027 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Dehly_0655 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dehly_0142 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dehly_0924 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Dehly_1307 diaminobutyrate/2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Dehly_0457 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Dehly_1382 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dly00194] D Dehly_0552 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Dehly_0551 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Dehly_0550 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Dehly_0549 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Dehly_0548 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Dehly_0547 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Dehly_0546 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Dehly_0545 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dehly_0544 conserved hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dly03000] D Dehly_1024 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Dehly_1431 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Dehly_1134 cobalamin B12-binding domain protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Dehly_0065 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dehly_0130 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dehly_1342 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dehly_0598 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dehly_1336 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dehly_1663 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Dehly_0828 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D Dehly_0386 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Dehly_1708 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D Dehly_0127 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Dehly_0846 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Dehly_1519 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Dehly_0408 Protein of unknown function DUF128 K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI D Dehly_1177 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Dehly_0808 conserved hypothetical protein K07730 K07730; putative transcriptional regulator D Dehly_1350 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dehly_1356 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dehly_1204 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Dehly_0059 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Dehly_0911 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Dehly_0108 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Dehly_1285 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Dehly_1231 MraZ domain protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dly03021] D Dehly_1069 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dehly_0740 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dehly_0739 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dehly_0793 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Dehly_1696 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dehly_0519 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Dehly_0304 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Dehly_0340 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Dehly_0108 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Dehly_0870 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D Dehly_1439 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dly03019] D Dehly_0418 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dehly_0210 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dehly_1343 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Dehly_1167 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Dehly_0318 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dehly_0861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dehly_0534 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dehly_1439 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Dehly_0918 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dehly_0057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dehly_1407 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dehly_1469 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:dly03011] D Dehly_1016 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Dehly_1091 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Dehly_1070 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Dehly_1080 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Dehly_0755 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Dehly_1100 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Dehly_1083 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Dehly_1065 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Dehly_1098 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Dehly_1071 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Dehly_1101 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Dehly_1072 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Dehly_1084 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Dehly_0535 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Dehly_0554 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Dehly_1088 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Dehly_0753 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Dehly_1093 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Dehly_0002 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Dehly_0099 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Dehly_0342 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Dehly_1094 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Dehly_1097 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Dehly_1096 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Dehly_1085 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Dehly_1082 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Dehly_0636 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Dehly_0343 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Dehly_0341 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Dehly_0344 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Dehly_1066 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Dehly_1087 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Dehly_1078 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Dehly_1090 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Dehly_1068 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Dehly_1081 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Dehly_1472 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Dehly_0821 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Dehly_0201 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Dehly_1092 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Dehly_1095 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Dehly_1086 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Dehly_0202 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Dehly_0934 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Dehly_1089 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Dehly_1079 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Dehly_0203 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Dehly_0301 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Dehly_0752 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Dehly_0822 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Dehly_1073 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Dehly_1387 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Dehly_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dehly_R0011 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dehly_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dly03009] D Dehly_0418 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dehly_1339 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Dehly_0108 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Dehly_0519 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Dehly_0304 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Dehly_0340 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Dehly_1512 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Dehly_1147 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Dehly_0873 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Dehly_1232 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Dehly_1269 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Dehly_0021 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Dehly_0609 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Dehly_0761 maf protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Dehly_0774 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Dehly_0106 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Dehly_0736 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Dehly_1368 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Dehly_0110 ribosome-associated GTPase EngA K03977 engA; GTPase D Dehly_0695 GTP-binding proten HflX K03665 hflX; GTPase D Dehly_0663 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Dehly_1359 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Dehly_0522 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Dehly_1118 Iojap-related protein K09710 ybeB; ribosome-associated protein D Dehly_1299 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Dehly_1714 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Dehly_1371 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Dehly_0300 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dly03016] D Dehly_0093 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Dehly_0104 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dehly_0193 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dehly_0746 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dehly_1143 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dehly_1271 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dehly_1020 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dehly_0620 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dehly_0682 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dehly_1367 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dehly_0772 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dehly_0824 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dehly_0621 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dehly_1709 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dehly_1035 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dehly_0652 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dehly_1372 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dehly_1236 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dehly_1235 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dehly_0742 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dehly_1025 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dehly_1327 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Dehly_0362 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Dehly_0734 Methyltransferase type 11 K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229] D Dehly_1067 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Dehly_0523 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Dehly_0381 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dehly_0733 Histone acetyltransferase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D Dehly_0663 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Dehly_0698 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Dehly_1500 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Dehly_0751 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Dehly_R0006 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Dehly_0298 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Dehly_1587 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Dehly_1115 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Dehly_0407 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Dehly_1473 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Dehly_0024 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Dehly_1597 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Dehly_0618 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Dehly_1457 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Dehly_0829 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_0275 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_0156 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_1054 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_1152 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_1523 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_0737 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Dehly_1369 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Dehly_1421 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Dehly_1405 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Dehly_1127 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Dehly_0534 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dehly_0163 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:dly03012] D Dehly_0521 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Dehly_0823 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Dehly_0054 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Dehly_1017 Translation elongation factor EFTs/EF1B dimerization K02357 tsf; elongation factor Ts D Dehly_0337 translation elongation factor Tu K02358 tuf; elongation factor Tu D Dehly_0973 small GTP-binding protein K02355 fusA; elongation factor G D Dehly_1099 translation elongation factor G K02355 fusA; elongation factor G D Dehly_1502 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D Dehly_0966 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Dehly_1019 ribosome recycling factor K02838 frr; ribosome recycling factor D Dehly_0967 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Dehly_0650 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Dehly_1074 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Dehly_0880 translation elongation factor P K02356 efp; elongation factor P D Dehly_0881 tRNA synthetase class II (D K and N) K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Dehly_0556 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Dehly_1510 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:dly03110] D Dehly_1312 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Dehly_1200 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Dehly_1432 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Dehly_0057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dehly_1407 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dehly_1302 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Dehly_1430 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Dehly_0058 GrpE protein K03687 GRPE; molecular chaperone GrpE D Dehly_1282 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Dehly_1406 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Dehly_0895 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_1022 serine protease, DegP K04771 degP; serine protease Do [EC:3.4.21.107] D Dehly_1122 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dehly_0545 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dehly_1408 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Dehly_1409 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Dehly_0708 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:dly04131] D Dehly_1125 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dehly_1466 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dehly_0863 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dehly_0947 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome [BR:dly03051] C 03032 DNA replication proteins [BR:dly03032] D Dehly_0126 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Dehly_1691 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Dehly_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Dehly_0635 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dehly_0633 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC D Dehly_0792 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Dehly_1689 DNA primase catalytic core domain protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Dehly_0754 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dehly_1577 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dehly_0949 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1187 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1505 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dehly_0693 DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dehly_0536 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Dehly_0465 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dehly_0764 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Dehly_0095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dehly_0651 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dehly_1374 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dehly_1362 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dehly_0690 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dly03036] D Dehly_0418 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dehly_1430 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Dehly_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Dehly_0573 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dehly_1233 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dehly_0150 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Dehly_0574 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dehly_1234 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dehly_0873 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Dehly_0689 integrase family protein K03733 xerC; integrase/recombinase XerC D Dehly_1685 integrase family protein K03733 xerC; integrase/recombinase XerC D Dehly_0977 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Dehly_1379 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] C 03400 DNA repair and recombination proteins [BR:dly03400] D Dehly_1713 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Dehly_0844 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Dehly_1691 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Dehly_1214 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Dehly_0211 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Dehly_0097 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dehly_1123 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dehly_0555 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Dehly_0980 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dehly_0651 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dehly_0095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Dehly_0797 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Dehly_1052 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Dehly_0938 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Dehly_0900 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dehly_0740 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dehly_0739 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dehly_1069 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dehly_0632 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Dehly_0941 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Dehly_0756 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Dehly_0470 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Dehly_1577 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dehly_0949 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1187 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dehly_1505 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dehly_0693 DNA-directed DNA polymerase, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dehly_0536 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Dehly_0465 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dehly_0754 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dehly_1690 UvrD/REP helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Dehly_1345 recA protein K03553 recA; recombination protein RecA D Dehly_1142 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Dehly_0738 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dehly_0208 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Dehly_1471 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Dehly_0794 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Dehly_0773 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Dehly_1160 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Dehly_0937 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dehly_0459 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Dehly_0463 recombination protein RecR K06187 recR; recombination protein RecR D Dehly_0568 Sigma 54 interacting domain protein K03631 recN; DNA repair protein RecN (Recombination protein N) D Dehly_1619 DEAD/DEAH box helicase domain protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D Dehly_1374 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dehly_1362 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dehly_0690 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Dehly_0318 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dehly_1700 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Dehly_1375 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Dehly_0425 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Dehly_0428 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D Dehly_1344 regulatory protein RecX K03565 recX; regulatory protein D Dehly_0719 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dehly_1284 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:dly03029] D Dehly_0521 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Dehly_0823 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Dehly_1017 Translation elongation factor EFTs/EF1B dimerization K02357 tsf; elongation factor Ts D Dehly_0337 translation elongation factor Tu K02358 tuf; elongation factor Tu D Dehly_0973 small GTP-binding protein K02355 fusA; elongation factor G D Dehly_1099 translation elongation factor G K02355 fusA; elongation factor G D Dehly_0742 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dehly_1143 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dehly_0682 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dehly_0772 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Dehly_1020 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dehly_1039 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Dehly_1476 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dehly_1038 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dehly_0754 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dehly_0057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dehly_0058 GrpE protein K03687 GRPE; molecular chaperone GrpE D Dehly_1407 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dehly_1406 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Dehly_1302 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Dehly_0381 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dly02000] D Dehly_0399 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Dehly_0970 ABC transporter tungsten-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Dehly_0971 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Dehly_0972 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Dehly_1592 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dehly_1593 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dehly_1594 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dehly_0376 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Dehly_0377 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Dehly_0378 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Dehly_0909 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Dehly_0906 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Dehly_0908 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Dehly_0907 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Dehly_0422 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D Dehly_0421 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Dehly_1318 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dehly_1320 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Dehly_1321 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Dehly_1322 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Dehly_1452 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Dehly_1453 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Dehly_1455 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dehly_1456 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dehly_0402 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Dehly_0403 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Dehly_0558 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dehly_0717 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Dehly_0718 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Dehly_0716 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Dehly_0715 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Dehly_1242 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Dehly_1243 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Dehly_1241 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dehly_1244 conserved hypothetical protein K16915 cbiL; nickel transport protein D Dehly_0511 BioY protein K03523 bioY; biotin transport system substrate-specific component D Dehly_0064 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Dehly_1292 putative ABC-2 type transport system permease protein K25147 berB; beta-exotoxin I transport system permease protein D Dehly_1293 ABC-type multidrug transport system, permease component K25147 berB; beta-exotoxin I transport system permease protein D Dehly_1291 ABC transporter related protein K25148 berA; beta-exotoxin I transport system ATP-binding protein D Dehly_0440 cytochrome c assembly protein K02195 ccmC; heme exporter protein C D Dehly_0439 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Dehly_0438 ABC transporter related protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Dehly_1385 sodium extrusion protein NatB, putative K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_0944 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_1297 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_1390 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_1567 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_1296 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_0487 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dehly_1386 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dehly_0486 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dehly_1295 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dehly_1389 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dehly_0945 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dehly_1568 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dehly_0942 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dehly_0943 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dehly_0681 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Dehly_0879 ammonium transporter K03320 amt; ammonium transporter, Amt family D Dehly_1536 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Dehly_1049 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Dehly_0462 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Dehly_1415 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dehly_1448 hypothetical protein K21449 ata; trimeric autotransporter adhesin D Dehly_0088 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Dehly_0476 zinc/iron permease K16267 zipB; zinc and cadmium transporter D Dehly_1614 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Dehly_1608 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Dehly_0153 Na+/solute symporter K14393 actP; cation/acetate symporter D Dehly_1199 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Dehly_1120 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter D Dehly_0090 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Dehly_0089 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Dehly_1507 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Dehly_1508 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Dehly_1466 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dehly_1603 arsenical-resistance protein K03325 ACR3; arsenite transporter D Dehly_0363 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Dehly_0364 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Dehly_1050 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter D Dehly_0825 conserved hypothetical protein K03646 tolA; colicin import membrane protein D Dehly_1217 hypothetical protein K03646 tolA; colicin import membrane protein D Dehly_0768 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Dehly_0722 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Dehly_0129 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Dehly_0435 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Dehly_0670 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:dly02044] D Dehly_1221 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Dehly_1130 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dehly_0161 general secretion family protein K02650 pilA; type IV pilus assembly protein PilA D Dehly_0171 general secretion K02650 pilA; type IV pilus assembly protein PilA D Dehly_1222 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Dehly_1227 putative type IV pilus assembly family protein K02662 pilM; type IV pilus assembly protein PilM D Dehly_0787 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_1228 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_0905 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_0313 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_0036 Soluble ligand binding domain protein K02237 comEA; competence protein ComEA D Dehly_1230 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Dehly_0037 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Dehly_0213 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dehly_1468 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Dehly_0339 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dehly_1467 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Dehly_1475 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dehly_1077 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dehly_1114 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dehly_0851 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1346 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1347 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1348 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Dehly_1349 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dly02042] D Dehly_1415 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dehly_1394 Hly-III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:dly02022] D Dehly_1190 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dehly_1314 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dehly_0016 response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dehly_0985 putative two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dehly_0482 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_1547 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_1149 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dehly_0866 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Dehly_0999 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Dehly_1313 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Dehly_1220 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Dehly_1140 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR D Dehly_0295 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Dehly_0920 PAS/PAC sensor signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Dehly_0758 response regulator receiver protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:dly02035] D Dehly_0787 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_1228 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_0905 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_0313 twitching motility protein K02669 pilT; twitching motility protein PilT D Dehly_0161 general secretion family protein K02650 pilA; type IV pilus assembly protein PilA D Dehly_0171 general secretion K02650 pilA; type IV pilus assembly protein PilA D Dehly_1222 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Dehly_1130 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dehly_1227 putative type IV pilus assembly family protein K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dly04812] D Dehly_0349 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Dehly_0574 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dehly_1234 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dehly_0573 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dehly_1233 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Dehly_0830 Tubulin/FtsZ GTPase K22222 cetZ; tubulin-like protein CetZ D Dehly_0864 Tubulin/FtsZ GTPase K22222 cetZ; tubulin-like protein CetZ D Dehly_0607 Tubulin/FtsZ GTPase K22222 cetZ; tubulin-like protein CetZ C 04147 Exosome [BR:dly04147] D Dehly_0861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dehly_0863 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dehly_0947 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dehly_1407 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dehly_0057 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dehly_0137 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Dehly_0337 translation elongation factor Tu K02358 tuf; elongation factor Tu D Dehly_0362 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Dehly_0798 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dehly_1061 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dehly_1076 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dehly_0288 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dehly_0933 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dehly_0932 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dehly_0595 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Dehly_0559 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_1485 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dehly_0456 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Dehly_1316 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dehly_0744 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dehly_1425 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dehly_0969 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dehly_0699 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:dly02048] D Dehly_0233 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Dehly_0319 Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Dehly_0232 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Dehly_0322 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Dehly_0230 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Dehly_0323 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Dehly_0468 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Dehly_1253 conserved hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Dehly_1675 Site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Dehly_1610 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Dehly_1612 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Dehly_0167 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Dehly_1564 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Dehly_1563 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE D Dehly_1434 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Dehly_1519 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Dehly_0077 death-on-curing family protein K07341 doc; death on curing protein D Dehly_1447 cytotoxic translational repressor K07334 higB-1; toxin HigB-1 D Dehly_0163 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Dehly_0574 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dehly_1234 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dehly_0104 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Dehly_0381 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:dly01504] D Dehly_0482 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Dehly_1547 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dly00537] D Dehly_1316 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dly03100] D Dehly_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dehly_R0042 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dehly_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dehly_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0021 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dehly_R0034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dehly_R0027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dehly_R0044 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Dehly_R0015 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dehly_R0033 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dehly_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dehly_R0040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dehly_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dehly_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dehly_R0045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dehly_R0013 tRNA-His K14226 tRNA-His; tRNA His D Dehly_R0012 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dehly_R0043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dehly_R0025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dehly_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dehly_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met D Dehly_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D Dehly_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Dehly_R0031 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dehly_R0002 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dehly_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dehly_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dehly_R0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dehly_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dehly_R0041 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dehly_R0010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dehly_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Dehly_R0009 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dehly_R0001 tRNA-Val K14237 tRNA-Val; tRNA Val D Dehly_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val D Dehly_R0003 tRNA-Val K14237 tRNA-Val; tRNA Val D Dehly_R0051 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Dehly_R0011 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dehly_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dehly_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dehly_R0006 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Dehly_R0050 ssrA; tmRNA as predicted by Rfam (RF00023), score 149.70 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Dehly_0886 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D Dehly_0852 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Dehly_0141 Methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Dehly_1209 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Dehly_0509 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Dehly_1324 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Dehly_0348 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dehly_0720 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dehly_0101 radical SAM domain-containing protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dehly_0335 glycosyl transferase group 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D Dehly_0063 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Dehly_1358 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Dehly_0257 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Dehly_0935 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Dehly_0011 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Dehly_0842 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Dehly_0643 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Dehly_0882 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Dehly_1474 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Dehly_0249 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Dehly_0243 carbohydrate kinase, YjeF related protein K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D Dehly_1043 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Dehly_0931 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Dehly_0134 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Dehly_0380 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Dehly_0563 flavodoxin/nitric oxide synthase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D Dehly_0968 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Dehly_1240 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Dehly_0235 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Dehly_1538 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Dehly_1166 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Dehly_0645 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D Dehly_0959 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Dehly_0084 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D Dehly_0149 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Dehly_0683 trigger factor K03545 tig; trigger factor D Dehly_0030 formate dehydrogenase accessory protein K02380 fdhE; FdhE protein D Dehly_1478 SsrA-binding protein K03664 smpB; SsrA-binding protein D Dehly_1411 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Dehly_1412 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Dehly_1413 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Dehly_0247 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Dehly_1410 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Dehly_1030 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D Dehly_1009 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D Dehly_1712 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Dehly_1609 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Dehly_1589 HhH-GPD family protein K07457 K07457; endonuclease III related protein D Dehly_0765 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Dehly_0160 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Dehly_0691 DNA protecting protein DprA K04096 smf; DNA processing protein D Dehly_0317 SMF family protein K04096 smf; DNA processing protein D Dehly_1621 SMF family protein K04096 smf; DNA processing protein D Dehly_0767 Translin K07477 K07477; translin D Dehly_0351 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Dehly_0401 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Dehly_0578 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Dehly_1428 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Dehly_1586 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Dehly_1156 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Dehly_0278 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1660 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1558 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1542 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1527 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1521 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1354 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1305 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_1260 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_0784 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_0281 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_0781 transposase IS3/IS911 family protein K07483 K07483; transposase D Dehly_0617 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase D Dehly_0518 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase D Dehly_1535 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dehly_1037 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dehly_0003 transposase mutator type K07493 K07493; putative transposase D Dehly_0023 transposase mutator type K07493 K07493; putative transposase D Dehly_0180 transposase mutator type K07493 K07493; putative transposase D Dehly_0212 transposase mutator type K07493 K07493; putative transposase D Dehly_0284 transposase mutator type K07493 K07493; putative transposase D Dehly_0264 transposase mutator type K07493 K07493; putative transposase D Dehly_0466 transposase mutator type K07493 K07493; putative transposase D Dehly_0480 transposase mutator type K07493 K07493; putative transposase D Dehly_0542 transposase mutator type K07493 K07493; putative transposase D Dehly_0646 transposase mutator type K07493 K07493; putative transposase D Dehly_0430 transposase mutator type K07493 K07493; putative transposase D Dehly_1560 transposase mutator type K07493 K07493; putative transposase D Dehly_1583 transposase mutator type K07493 K07493; putative transposase D Dehly_1616 transposase mutator type K07493 K07493; putative transposase D Dehly_1109 transposase mutator type K07493 K07493; putative transposase D Dehly_1618 transposase mutator type K07493 K07493; putative transposase D Dehly_1515 transposase mutator type K07493 K07493; putative transposase D Dehly_1529 transposase mutator type K07493 K07493; putative transposase D Dehly_1015 transposase mutator type K07493 K07493; putative transposase D Dehly_1191 transposase mutator type K07493 K07493; putative transposase D Dehly_1196 transposase mutator type K07493 K07493; putative transposase D Dehly_1352 transposase mutator type K07493 K07493; putative transposase D Dehly_1378 transposase mutator type K07493 K07493; putative transposase D Dehly_0070 transposase mutator type K07493 K07493; putative transposase D Dehly_0280 integrase catalytic subunit K07497 K07497; putative transposase D Dehly_0272 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Dehly_0279 Integrase catalytic region K07497 K07497; putative transposase D Dehly_0783 Integrase catalytic region K07497 K07497; putative transposase D Dehly_0447 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Dehly_1559 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1259 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1304 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1522 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1526 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1543 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1661 Integrase catalytic region K07497 K07497; putative transposase D Dehly_1353 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Dehly_0464 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Dehly_1606 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Dehly_0086 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Dehly_1010 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth D Dehly_0814 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Dehly_0747 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Dehly_0974 protein of unknown function DUF95 transmembrane K06384 spoIIM; stage II sporulation protein M D Dehly_1703 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D Dehly_0760 GTP-binding protein TypA K06207 typA; GTP-binding protein D Dehly_1463 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Dehly_0434 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D Dehly_1323 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Dehly_0132 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Dehly_1707 protein of unknown function DUF1648 K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D Dehly_1173 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Dehly_0983 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Dehly_0461 export-related chaperone CsaA K06878 K06878; tRNA-binding protein D Dehly_0008 Patatin K07001 K07001; NTE family protein D Dehly_0956 Patatin K07001 K07001; NTE family protein D Dehly_0588 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Dehly_0680 SufBD protein K09014 sufB; Fe-S cluster assembly protein SufB D Dehly_0600 ribonuclease BN K07058 K07058; membrane protein D Dehly_0775 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Dehly_0854 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Dehly_1392 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D Dehly_1171 LemA family protein K03744 lemA; LemA protein D Dehly_1277 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein D Dehly_0412 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein C 99997 Function unknown D Dehly_0239 protein of unknown function DUF255 K06888 K06888; uncharacterized protein D Dehly_1641 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W D Dehly_1650 phage protein D-like protein K06905 D; Bacteriophage probable baseplate hub protein D Dehly_1657 tail sheath protein K06907 FI; Bacteriophage tail sheath protein D Dehly_0333 CoA-binding domain protein K06929 K06929; uncharacterized protein D Dehly_1263 protein of unknown function DUF134 K06933 K06933; uncharacterized protein D Dehly_1145 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Dehly_0198 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Dehly_0553 conserved hypothetical protein K06960 K06960; uncharacterized protein D Dehly_1335 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein D Dehly_1667 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07006 K07006; uncharacterized protein D Dehly_1060 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein D Dehly_1588 amidohydrolase 2 K07045 K07045; uncharacterized protein D Dehly_1047 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D Dehly_1601 permease K07089 K07089; uncharacterized protein D Dehly_0896 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dehly_0898 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dehly_1048 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dehly_0373 protein of unknown function DUF75 K07159 K07159; uncharacterized protein D Dehly_0538 protein of unknown function DUF75 K07159 K07159; uncharacterized protein D Dehly_0125 protein of unknown function DUF164 K07164 K07164; uncharacterized protein D Dehly_0750 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Dehly_0789 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Dehly_0119 hypothetical protein K09117 K09117; uncharacterized protein D Dehly_0296 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Dehly_0984 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Dehly_1163 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Dehly_0899 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Dehly_1172 conserved hypothetical protein K09981 K09981; uncharacterized protein D Dehly_0570 conserved hypothetical protein K07502 yprB; uncharacterized protein D Dehly_0087 Putitive phosphate transport regulator K07220 K07220; uncharacterized protein D Dehly_0520 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024