+D GENES KO
#
KEGG Orthology (KO) - Desulfonema magnum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dmm00010]
D dnm_052480 pgi; Glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_079890 Phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D dnm_063300 Ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D dnm_037710 aroA2; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_078980 aroA'; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_023020 tpiA1; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_030900 tpiA2; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_024810 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_092270 gapB; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_003590 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D dnm_071260 gpmI; Phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D dnm_070630 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D dnm_014920 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D dnm_064270 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D dnm_072800 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_092260 Pyruvate phosphate dikinase, PEP/pyruvate-binding K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_042800 por1; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_078040 por2; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_032550 2-oxoglutarate synthase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_058640 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_069410 korA2; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_032540 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_058650 korB1; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_069400 korB2; 2-oxoglutarate synthase subunit KorN K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_090160 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_025880 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_078120 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_061870 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:dmm00020]
D dnm_056360 gltA1; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D dnm_062050 gltA2; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D dnm_086830 acnA; Aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D dnm_056460 icd; Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D dnm_035370 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D dnm_035380 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_032550 2-oxoglutarate synthase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_058640 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_069410 korA2; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_032540 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_058650 korB1; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_069400 korB2; 2-oxoglutarate synthase subunit KorN K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_032530 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D dnm_058660 korC; 2-oxoglutarate synthase subunit KorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D dnm_032560 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D dnm_058630 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D dnm_056670 sucD1; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_059050 sucD2; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_056660 sucC1; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_059060 sucC2; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_035860 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_042820 sdhA2; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_035870 sdhB1; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_042810 sdhB2; putative succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_035850 sdhC1; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_042840 sdhC2; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_078000 fumA; Fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D dnm_099370 fumC; Fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059070 Putative pyruvate carboxylase subunit B, PycB-like K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D dnm_061870 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_042800 por1; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_078040 por2; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:dmm00030]
D dnm_052480 pgi; Glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D dnm_096100 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D dnm_061930 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D dnm_034480 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D dnm_024160 rpiB; Ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_078710 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D dnm_060290 aor1; Tungsten-containing aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D dnm_069970 bamB; Tungsten-containing aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D dnm_063300 Ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D dnm_037710 aroA2; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_078980 aroA'; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_079890 Phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:dmm00040]
D dnm_057900 Cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D dnm_044510 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D dnm_084400 Putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D dnm_096100 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D dnm_005840 Alcohol dehydrogenase family protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:dmm00051]
D dnm_045760 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_009510 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D dnm_009460 fcl; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_079890 Phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D dnm_005840 Alcohol dehydrogenase family protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D dnm_063300 Ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D dnm_037710 aroA2; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_078980 aroA'; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_023020 tpiA1; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_030900 tpiA2; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_024160 rpiB; Ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D dnm_024800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_072850 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:dmm00052]
D dnm_071860 HIT domain-containing protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D dnm_008000 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_047080 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_059610 NADH dehydrogenase domain-containing protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_084400 Putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:dmm00053]
D dnm_044510 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D dnm_059590 NADH dehydrogenase domain-containing protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:dmm00500]
D dnm_084400 Putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D dnm_012600 Putative glycogen synthase, GlgA-like K00703 glgA; starch synthase [EC:2.4.1.21]
D dnm_012590 glgB; 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D dnm_045230 Putative glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D dnm_021390 Glycoside hydrolase, family 77 K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_052480 pgi; Glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dmm00520]
D dnm_094810 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D dnm_063020 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D dnm_086020 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D dnm_092990 Nucleotidyl transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D dnm_022260 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D dnm_000640 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D dnm_008230 wecB1; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D dnm_049770 DegT/DnrJ/EryC1/StrS aminotransferase domain-containing protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D dnm_039420 pseB; UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D dnm_097000 Polysaccharide biosynthesis protein, CapD-like K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D dnm_039410 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D dnm_097120 Acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D dnm_039590 NAD(P)-binding domain-containing protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D dnm_039640 NAD(P)-binding domain-containing protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D dnm_091810 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_084400 Putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D dnm_044510 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D dnm_097180 NAD dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D dnm_071860 HIT domain-containing protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D dnm_008000 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_047080 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_059610 NADH dehydrogenase domain-containing protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_059590 NADH dehydrogenase domain-containing protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D dnm_024800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_072850 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_052480 pgi; Glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D dnm_045760 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D dnm_009510 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D dnm_097160 Aminotransferase family protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D dnm_009460 fcl; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:dmm00620]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_042800 por1; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_078040 por2; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_032550 2-oxoglutarate synthase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_058640 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_069410 korA2; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_032540 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_058650 korB1; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_069400 korB2; 2-oxoglutarate synthase subunit KorN K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_090160 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D dnm_064270 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D dnm_055070 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D dnm_025880 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_078120 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_003080 Beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D dnm_013390 Beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D dnm_028170 Beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D dnm_058160 Beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D dnm_067810 Beta-lactamase and rhodanese-like domains-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D dnm_094120 oadB; Oxaloacetate decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D dnm_059070 Putative pyruvate carboxylase subunit B, PycB-like K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_078000 fumA; Fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D dnm_099370 fumC; Fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D dnm_096230 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D dnm_061870 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D dnm_072800 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_092260 Pyruvate phosphate dikinase, PEP/pyruvate-binding K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_015080 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D dnm_015100 cimA; (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dmm00630]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_056360 gltA1; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D dnm_062050 gltA2; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D dnm_086830 acnA; Aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_047770 Dehydratase domain-containing protein, MaoC-like K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D dnm_019390 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_047430 mce; Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_059120 sbm; Methylmalonyl-CoA mutase-like K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D dnm_031580 FAD-binding domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D dnm_031600 FAD-binding domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D dnm_092390 FAD-linked oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D dnm_057920 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, cysteine-rich domain-containing K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D dnm_031080 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D dnm_091930 gyaR; Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D dnm_026790 HAD hydrolase domain-containing protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D dnm_070620 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_074730 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_024180 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D dnm_049830 gcvPA; Glycine cleavage system, dehydrogenase (decarboxylating) protein P subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D dnm_049820 gcvPB; Glycine cleavage system, dehydrogenase (decarboxylating) protein P subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D dnm_067580 gcvT; Glycine cleavage system, aminomethyltransferase protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_049840 gcvH; Glycine cleavage system, octanoyl/lipoyl carrier protein H K02437 gcvH; glycine cleavage system H protein
D dnm_020710 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D dnm_035380 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:dmm00640]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_042780 prpE1; Propionate-CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D dnm_076770 prpE2; Propionate-CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D dnm_025880 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_078120 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_054720 bcd; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_076040 Acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_096200 Putative quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D dnm_042300 Aminotransferase family protein, class III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D dnm_019390 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_047430 mce; Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_059120 sbm; Methylmalonyl-CoA mutase-like K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D dnm_056660 sucC1; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_059060 sucC2; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_056670 sucD1; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_059050 sucD2; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:dmm00650]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036490 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D dnm_054750 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D dnm_009430 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D dnm_021500 crt; Short-chain-enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D dnm_037080 Enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D dnm_054720 bcd; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_076040 Acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_063620 AMP-binding enzyme K01896 ACSM; medium-chain acyl-CoA synthetase [EC:6.2.1.2]
D dnm_047770 Dehydratase domain-containing protein, MaoC-like K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D dnm_047750 phaC; Poly(3-hydroxyalkanoate) polymerase, subunit PhaC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D dnm_047740 Poly(3-hydroxyalkanoate) synthase domain-containing protein K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D dnm_079260 gcdA; Glutaconyl-CoA decarboxylase, subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D dnm_094120 oadB; Oxaloacetate decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D dnm_076260 Coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D dnm_076270 Coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D dnm_035860 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_042820 sdhA2; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_035870 sdhB1; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_042810 sdhB2; putative succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_035850 sdhC1; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_042840 sdhC2; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_042300 Aminotransferase family protein, class III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D dnm_056620 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_042800 por1; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_078040 por2; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_032550 2-oxoglutarate synthase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_058640 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_069410 korA2; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_032540 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_058650 korB1; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_069400 korB2; 2-oxoglutarate synthase subunit KorN K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_037070 Pyruvate carboxyltransferase family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D dnm_081650 Pyruvate carboxyltransferase family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D dnm_029230 acsA2; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D dnm_023790 Enoyl-reductase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D dnm_083990 3HB-oligomer hydrolase domain-containing protein K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D dnm_015130 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_032190 Thiamine pyrophosphate enzyme family protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_015120 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:dmm00660]
D dnm_015130 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_032190 Thiamine pyrophosphate enzyme family protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_015120 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D dnm_056660 sucC1; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_059060 sucC2; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_056670 sucD1; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_059050 sucD2; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_036080 leuC1; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D dnm_064560 leuC2; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D dnm_036060 leuD1; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D dnm_064550 leuD2; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D dnm_006180 3-isopropylmalate dehydrogenase, LeuB-like K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:dmm00562]
D dnm_023010 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D dnm_052160 Inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D dnm_089400 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D dnm_023020 tpiA1; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_030900 tpiA2; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dmm00190]
D dnm_084370 nuoF2; NADH-quinone oxidoreductase subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D dnm_095790 nuoF3; NADH-quinone oxidoreductase subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D dnm_001490 Molybdopterin oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D dnm_034440 Formate dehydrogenase domain-containing protein K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D dnm_084350 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D dnm_035860 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_042820 sdhA2; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_035870 sdhB1; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_042810 sdhB2; putative succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_035850 sdhC1; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_042840 sdhC2; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_085570 cydA; Cytochrome bd ubiquinol oxidase, subunit alpha K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D dnm_085560 cydB; Cytochrome bd ubiquinol oxidase, subunit beta K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D dnm_017420 Double cache domain-containing protein K08738 CYC; cytochrome c
D dnm_018720 Double Cache domain-containing protein K08738 CYC; cytochrome c
D dnm_079430 Double cache domain-containing protein K08738 CYC; cytochrome c
D dnm_081730 Single Cache domain-containing protein K08738 CYC; cytochrome c
D dnm_093040 atpA; ATP synthase, subunit alpha (ATP synthase F1 sector subunit alpha) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D dnm_093020 atpD; ATP synthase, subunit beta (ATP synthase F1 sector subunit beta) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D dnm_093030 atpG; ATP synthase, subunit gamma (ATP synthase F1 sector subunit gamma) K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D dnm_093050 atpH; ATP synthase, subunit delta (ATP synthase F1 sector subunit delta) K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D dnm_093010 atpC; ATP synthase, subunit epsilon (ATP synthase F1 sector subunit epsilon) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D dnm_000730 atpB1; ATP synthase, subunit alpha (ATP synthase F0 sector subunit a) K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D dnm_080660 atpB2; ATP synthase, subunit alpha (ATP synthase F0 sector subunit a) K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D dnm_080690 atpF1; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_080700 atpF2; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_093060 atpF3; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_093070 atpF4; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_000720 atpE1; ATP synthase, subunit gamma (ATP synthase F0 sector subunit c) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D dnm_080670 atpE2; ATP synthase, subunit gamma (ATP synthase F0 sector subunit c) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D dnm_080680 atpE3; ATP synthase, subunit gamma (ATP synthase F0 sector subunit c) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D dnm_060260 Uncharacterized protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:dmm00710]
D dnm_003590 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D dnm_024810 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_092270 gapB; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_063300 Ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D dnm_061930 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D dnm_024160 rpiB; Ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D dnm_023020 tpiA1; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_030900 tpiA2; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_096100 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D dnm_034480 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D dnm_096230 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D dnm_072800 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_092260 Pyruvate phosphate dikinase, PEP/pyruvate-binding K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:dmm00720]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_042800 por1; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_078040 por2; Pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D dnm_072800 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_092260 Pyruvate phosphate dikinase, PEP/pyruvate-binding K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D dnm_096230 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D dnm_059070 Putative pyruvate carboxylase subunit B, PycB-like K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_078000 fumA; Fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D dnm_099370 fumC; Fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D dnm_035860 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_042820 sdhA2; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D dnm_035870 sdhB1; Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_042810 sdhB2; putative succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D dnm_035850 sdhC1; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_042840 sdhC2; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D dnm_056670 sucD1; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_059050 sucD2; Succinate--CoA ligase [ADP-forming], subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D dnm_056660 sucC1; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_059060 sucC2; Succinate--CoA ligase [ADP-forming], subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D dnm_056620 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D dnm_055620 Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_032550 2-oxoglutarate synthase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_058640 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_069410 korA2; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D dnm_032540 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_058650 korB1; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_069400 korB2; 2-oxoglutarate synthase subunit KorN K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D dnm_032530 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D dnm_058660 korC; 2-oxoglutarate synthase subunit KorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D dnm_032560 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D dnm_058630 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D dnm_056460 icd; Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D dnm_086830 acnA; Aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D dnm_019390 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_047430 mce; Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_059120 sbm; Methylmalonyl-CoA mutase-like K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D dnm_034450 Formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D dnm_095740 Methylenetetrahydrofolate reductase domain-containing protein K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D dnm_072420 rnfB2; Ion-translocating oxidoreductase complex, subunit B K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D dnm_023930 folD; Bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D dnm_068610 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D dnm_095810 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_036670 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_084020 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_095730 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_033650 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_013350 Pterin-binding domain-containing protein K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D dnm_058130 Pterin-binding domain-containing protein K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D dnm_013300 cdhA1; Acetyl-CoA decarbonylase/synthase complex, subunit alpha K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_058880 cooS; Carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_066390 cdhA2; Acetyl-CoA decarbonylase/synthase complex, subunit alpha K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_058860 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D dnm_013320 cdhC; Acetyl-CoA decarbonylase/synthase complex, subunit beta K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D dnm_013340 cdhE; Acetyl-CoA decarbonylase/synthase complex, subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D dnm_013290 cdhD; Acetyl-CoA decarbonylase/synthase complex, subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:dmm00680]
D dnm_011400 Formate dehydrogenase family protein K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D dnm_084970 4Fe-4S cluster protein K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D dnm_034450 Formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D dnm_095740 Methylenetetrahydrofolate reductase domain-containing protein K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D dnm_072420 rnfB2; Ion-translocating oxidoreductase complex, subunit B K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D dnm_013340 cdhE; Acetyl-CoA decarbonylase/synthase complex, subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D dnm_013290 cdhD; Acetyl-CoA decarbonylase/synthase complex, subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D dnm_013300 cdhA1; Acetyl-CoA decarbonylase/synthase complex, subunit alpha K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_058880 cooS; Carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_066390 cdhA2; Acetyl-CoA decarbonylase/synthase complex, subunit alpha K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_058860 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D dnm_024180 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D dnm_014920 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D dnm_096230 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_063300 Ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D dnm_037710 aroA2; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_078980 aroA'; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_049960 Molybdenum formylmethanofuran dehydrogenase domain-containing protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D dnm_069860 Molybdenum formylmethanofuran dehydrogenase domain-containing protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D dnm_016200 Coenzyme F420 hydrogenase family protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D dnm_011450 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_033690 Fe-4S ferredoxin K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_036620 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_049570 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_070030 bamE; putative heterodisulfide reductase, iron-sulfur subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_090980 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_100760 Two component system response regulator domain-containing protein, FAD/NAD(P)-binding domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_100780 Cysteine-rich domain-containing protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_100770 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D dnm_031590 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, cysteine-rich domain-containing K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D dnm_011420 Methyl-viologen-reducing hydrogenase family protein K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D dnm_033670 Hydrogenase domain-containing protein K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D dnm_036630 Methyl-viologen-reducing hydrogenase family protein K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D dnm_070070 bamF; Coenzyme F420 non-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D dnm_084990 Methyl-viologen-reducing hydrogenase domain-containing protein K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_071260 gpmI; Phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D dnm_070630 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D dnm_040360 Phosphoglycerate dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_048250 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_078580 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_084670 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D dnm_053380 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional proteiP K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D dnm_012050 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D dnm_012100 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D dnm_030020 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D dnm_093820 Cobalamin-binding domain-containing protein K14084 mttC; trimethylamine corrinoid protein
D dnm_029950 Aminotransferase, class I and II K19793 mfnC; (5-formylfuran-3-yl)methyl phosphate transaminase [EC:2.6.1.108]
C 00910 Nitrogen metabolism [PATH:dmm00910]
D dnm_059680 hcp; Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D dnm_030860 Multi-heme domain-containing protein K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6]
D dnm_065120 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D dnm_070620 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_074730 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_087220 Glutamate synthase protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D dnm_073720 Glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D dnm_058020 arcC; Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:dmm00920]
D dnm_073650 cysC; Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_073870 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_073660 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D dnm_094920 DHH domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D dnm_076470 aprA; Adenylylsulfate reductase, subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D dnm_076460 aprB; Adenylylsulfate reductase, subunit beta K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D dnm_057430 Phosphoadenosine phosphosulfate reductase domain-containing protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D dnm_073380 dsrA; Sulfite reductase, dissimilatory-type, subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D dnm_073370 dsrB; Sulfite reductase, dissimilatory-type, subunit beta K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D dnm_008670 dsrM; putative redox complex linked to DsrAB, transmembrane subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D dnm_008680 dsrK; putative redox complex linked to DsrAB, iron-sulfur binding subunit K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D dnm_008690 dsrJ; putative redox complex linked to DsrAB, cytochrome c subunit K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D dnm_008700 dsrO; putative redox complex linked to DsrAB, iron-sulfur binding subunit K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D dnm_008710 dsrP; putative redox complex linked to DsrAB, transmembrane subunit K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D dnm_034970 molybdopterin oxidoreductase family protein K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D dnm_062860 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D dnm_100020 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D dnm_062870 cysK; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dmm00061]
D dnm_091050 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D dnm_032230 Putative 3-oxoacyl-[acyl-carrier-protein] synthase 3, FabH-like K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D dnm_060600 Putative 3-oxoacyl-[acyl-carrier-protein] synthase 3, FabH-like K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D dnm_063770 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D dnm_018320 Beta-ketoacyl-acyl synthase N-terminal domain-containing protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D dnm_091040 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D dnm_023000 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_055550 Beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_058990 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_091060 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_002180 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D dnm_023080 AMP-dependent synthetase/ligase family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_061130 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_065910 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_072360 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_096520 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:dmm00071]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_009440 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D dnm_009430 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D dnm_054720 bcd; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_076040 Acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_023080 AMP-dependent synthetase/ligase family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_061130 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_065910 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_072360 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_096520 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_090160 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dmm00561]
D dnm_020710 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D dnm_067700 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D dnm_075010 plsY; Glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D dnm_012420 Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D dnm_097180 NAD dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:dmm00564]
D dnm_096380 gpsA; Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D dnm_056590 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D dnm_067700 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D dnm_075010 plsY; Glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D dnm_012420 Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D dnm_050030 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D dnm_006170 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D dnm_006160 psd; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D dnm_034470 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D dnm_080590 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D dnm_092060 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D dnm_060570 Transferase hexapeptide repeat containing protein K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:dmm00592]
D dnm_009440 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dmm00230]
D dnm_027040 Hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D dnm_034820 Hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_078710 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D dnm_015330 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D dnm_085700 TP-grasp domain-containing protein K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D dnm_032060 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D dnm_054300 purQ; Phosphoribosylformylglycinamidine synthase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D dnm_054320 purL; Phosphoribosylformylglycinamidine, synthase subunit K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D dnm_061050 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D dnm_062890 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D dnm_059295 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D dnm_042090 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D dnm_008570 MGS domain-containing protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D dnm_008580 Bifunctional purine biosynthesis protein dimain-containing protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D dnm_085660 Phosphoesterase and nucleotidase domains-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D dnm_063450 surE; Nucleoside 5'-monophosphate phosphohydrolase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D dnm_000070 HAD hydrolase family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D dnm_058730 Polyphenol oxidoreductase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D dnm_075850 YfiH family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D dnm_062550 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D dnm_076200 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D dnm_069520 Ndk; Ndk: nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D dnm_088080 rdgB; ITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D dnm_031510 Dehydrogenase domain-containing protein K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D dnm_094170 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D dnm_075760 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D dnm_058480 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D dnm_005200 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D dnm_000700 Adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_004520 Nucleotide cyclase, CHASE2 domain-containing K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_010040 Adenylate/guanylate cyclase catalytic domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_034160 Two component system response regulator receiver and adenyl cyclase domains-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_037030 Adenylyl/guanylyl cyclase domain-containing protein, GAF and PAS domains-containing K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_037830 Adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_064230 Adenylyl/guanylyl cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_067390 Adenylate/guanylate cyclase domain-containing protein, CHASE2 domain-containing K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_080900 Adenylyl/guanylyl cyclase domain-containing protein, PAS domain-containing K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_083620 Adenylate/guanylate cyclase catalytic domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_091840 Adenylyl/guanylyl cyclase domain-containing protein, GAF and PAS domains-containing K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D dnm_079620 cyaB; Putative adenylyl cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D dnm_026390 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D dnm_016610 ade1; Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D dnm_076620 ade2; Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D dnm_032760 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D dnm_036840 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D dnm_082650 Histidine triad (HIT) family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D dnm_073650 cysC; Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_073870 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_058020 arcC; Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:dmm00240]
D dnm_007630 carB1; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D dnm_015320 carB2; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D dnm_013170 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D dnm_045900 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D dnm_045890 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D dnm_090170 Amidohydrolase-related family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D dnm_020270 pyrD; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D dnm_096240 pyrK2; Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D dnm_006670 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D dnm_087540 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D dnm_050060 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D dnm_069520 Ndk; Ndk: nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D dnm_036840 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D dnm_021200 dTTP/UTP pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D dnm_014890 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D dnm_076240 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D dnm_085660 Phosphoesterase and nucleotidase domains-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D dnm_063450 surE; Nucleoside 5'-monophosphate phosphohydrolase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D dnm_000070 HAD hydrolase family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D dnm_088420 udp; Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D dnm_037800 Phosphoribosyl transferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D dnm_007350 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D dnm_080240 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D dnm_007360 thymidylate synthase domain-containing protein K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D dnm_084880 Carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dmm00250]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_048370 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D dnm_005170 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D dnm_012070 asnB1; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_016270 asnB2; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_016290 asnB3; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_073570 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_100060 asnB4; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_048230 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D dnm_077310 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D dnm_046140 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D dnm_026390 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D dnm_042090 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D dnm_045900 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D dnm_042300 Aminotransferase family protein, class III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D dnm_087220 Glutamate synthase protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D dnm_073720 Glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D dnm_065120 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D dnm_059410 rocA; 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D dnm_070620 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_074730 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_007630 carB1; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D dnm_015320 carB2; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D dnm_013170 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D dnm_054300 purQ; Phosphoribosylformylglycinamidine synthase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D dnm_063020 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D dnm_015330 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dmm00260]
D dnm_019670 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D dnm_006540 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D dnm_053360 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D dnm_053380 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional proteiP K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D dnm_022990 Pyridoxal-phosphate dependent enzyme domain-containing protein K01733 thrC; threonine synthase [EC:4.2.3.1]
D dnm_063100 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D dnm_024180 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D dnm_020710 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D dnm_071260 gpmI; Phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D dnm_070630 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D dnm_040360 Phosphoglycerate dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_048250 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_078580 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_084670 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D dnm_049830 gcvPA; Glycine cleavage system, dehydrogenase (decarboxylating) protein P subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D dnm_049820 gcvPB; Glycine cleavage system, dehydrogenase (decarboxylating) protein P subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D dnm_067580 gcvT; Glycine cleavage system, aminomethyltransferase protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_049840 gcvH; Glycine cleavage system, octanoyl/lipoyl carrier protein H K02437 gcvH; glycine cleavage system H protein
D dnm_038680 methyltransferase domain-containing protein K00542 GAMT; guanidinoacetate N-methyltransferase [EC:2.1.1.2]
D dnm_076910 SAM-dependent methyltransferase domain-containing protein K00542 GAMT; guanidinoacetate N-methyltransferase [EC:2.1.1.2]
D dnm_006170 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D dnm_060420 ilvA; L-threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D dnm_024040 trpA; Tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D dnm_024020 trpB1; Tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D dnm_028150 trpB2; Tryptophan synthase, subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:dmm00270]
D dnm_062860 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D dnm_100020 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D dnm_062870 cysK; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D dnm_012350 Cys/Met metabolism PLP-dependent family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D dnm_041960 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D dnm_058170 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D dnm_058180 speE1; Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_061070 speE2; Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_084820 Spermine/spermidine synthase domain-containing protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_062560 mtnP; Methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D dnm_058730 Polyphenol oxidoreductase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D dnm_075850 YfiH family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D dnm_081700 mtnA; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D dnm_044840 Pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D dnm_095130 Cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D dnm_041950 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D dnm_019670 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D dnm_006540 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D dnm_053360 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D dnm_024620 Homocysteine biosynthesis domain-containing protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D dnm_091980 4Fe-4S ferredoxin iron-sulfur protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D dnm_064100 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084410 ilvE; Branched-chain-amino-acid transaminase 1 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_042790 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_059240 mdh2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dnm_040360 Phosphoglycerate dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_048250 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_078580 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_084670 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:dmm00280]
D dnm_064100 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084410 ilvE; Branched-chain-amino-acid transaminase 1 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_023500 Pyruvate synthase family protein K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7]
D dnm_054720 bcd; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_076040 Acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_037100 acdA3; Acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D dnm_009440 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D dnm_019390 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_047430 mce; Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D dnm_059120 sbm; Methylmalonyl-CoA mutase-like K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D dnm_037070 Pyruvate carboxyltransferase family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D dnm_081650 Pyruvate carboxyltransferase family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D dnm_029230 acsA2; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dmm00290]
D dnm_060420 ilvA; L-threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D dnm_036080 leuC1; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D dnm_064560 leuC2; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D dnm_036060 leuD1; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D dnm_064550 leuD2; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D dnm_006180 3-isopropylmalate dehydrogenase, LeuB-like K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D dnm_015130 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_032190 Thiamine pyrophosphate enzyme family protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_015120 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D dnm_015110 ilvC; Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D dnm_015180 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D dnm_064100 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084410 ilvE; Branched-chain-amino-acid transaminase 1 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_015080 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D dnm_015100 cimA; (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:dmm00300]
D dnm_053360 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D dnm_019670 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D dnm_006540 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D dnm_055420 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D dnm_054810 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D dnm_071100 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D dnm_046150 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D dnm_100270 Putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D dnm_010970 dapL; LL-diaminopimelate aminotransferase (LL-DAP-aminotransferase) K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D dnm_008350 Diaminopimelate decarboxylase family protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D dnm_009910 Diaminopimelate decarboxylase family protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D dnm_064370 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D dnm_000490 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:dmm00310]
D dnm_069000 Aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D dnm_035370 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_029430 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D dnm_051080 kamA1; Lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D dnm_068000 kamA2; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D dnm_046980 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:dmm00220]
D dnm_077320 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D dnm_077310 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D dnm_046140 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D dnm_054300 purQ; Phosphoribosylformylglycinamidine synthase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D dnm_070620 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_074730 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_007630 carB1; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D dnm_015320 carB2; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D dnm_013170 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D dnm_058020 arcC; Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D dnm_065120 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_064430 GNAT domain-containing protein K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D dnm_019240 argJ; Arginine biosynthesis bifunctional protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D dnm_071110 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D dnm_023950 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D dnm_071100 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:dmm00330]
D dnm_038680 methyltransferase domain-containing protein K00542 GAMT; guanidinoacetate N-methyltransferase [EC:2.1.1.2]
D dnm_076910 SAM-dependent methyltransferase domain-containing protein K00542 GAMT; guanidinoacetate N-methyltransferase [EC:2.1.1.2]
D dnm_038690 speA; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D dnm_078930 speB; Agmatinase (Agmatine ureohydrolase) K01480 speB; agmatinase [EC:3.5.3.11]
D dnm_058180 speE1; Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_061070 speE2; Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_084820 Spermine/spermidine synthase domain-containing protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_058170 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D dnm_039480 GNAT domain-containing protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D dnm_058060 rocD; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D dnm_086890 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D dnm_059410 rocA; 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D dnm_075500 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D dnm_048380 proA; Gamma-glutamyl phosphate reductase (glutamate-5-semialdehyde dehydrogenase) K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_046980 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:dmm00340]
D dnm_073930 hisG1; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D dnm_073940 hisG2; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D dnm_047040 Phosphoribosyl-AMP cyclohydrolase domain-containing protein K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D dnm_010610 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D dnm_036830 hisH1; Imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D dnm_097020 hisH2; Imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D dnm_005130 hisF1; Imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D dnm_079290 hisF2; Imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D dnm_097010 hisF3; Imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D dnm_010600 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D dnm_058670 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D dnm_050900 Histidinol phosphate phosphatase, HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D dnm_084650 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D dnm_048120 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D dnm_080260 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D dnm_068620 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D dnm_068630 ftcD; Formimidoyltetrahydrofolate cyclodeaminase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:dmm00350]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_058670 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D dnm_090160 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D dnm_014970 Aldolase domain-containing protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
C 00360 Phenylalanine metabolism [PATH:dmm00360]
D dnm_007510 Phenylacetate-coenzyme A ligase family protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D dnm_036200 paaK; Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D dnm_055680 Putative phenylacetate-coenzyme A ligase, paaK-like K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D dnm_003880 Uncharacterized protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D dnm_079480 Phenylacetic acid degradation-related domain-containing protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D dnm_070300 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D dnm_036490 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D dnm_054750 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_058670 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D dnm_046980 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:dmm00380]
D dnm_035370 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_031080 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dmm00400]
D dnm_039870 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D dnm_039890 aroB2; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D dnm_037710 aroA2; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_078980 aroA'; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D dnm_037720 aroB1; 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24]
D dnm_096110 aoQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D dnm_033580 aroE1; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D dnm_037750 aroE2; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D dnm_031160 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D dnm_031150 aroA1; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D dnm_031210 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D dnm_064640 trpE; Putative Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D dnm_064650 TrpG; Anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D dnm_036790 trpD1; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D dnm_064660 trpD2; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D dnm_005850 trpF1; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D dnm_024010 trpF2; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D dnm_043550 N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D dnm_064670 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D dnm_024040 trpA; Tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D dnm_024020 trpB1; Tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D dnm_028150 trpB2; Tryptophan synthase, subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D dnm_037730 pheA; Bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D dnm_031240 Prephenate dehydratase family protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_058670 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:dmm00410]
D dnm_042300 Aminotransferase family protein, class III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D dnm_041980 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D dnm_084880 Carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D dnm_054720 bcd; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D dnm_076040 Acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:dmm00430]
D dnm_025980 Putative glutathione hydrolase proenzyme, Ggt-like K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D dnm_048230 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D dnm_012090 Beta-lactamase domain-containing protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:dmm00450]
D dnm_012350 Cys/Met metabolism PLP-dependent family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D dnm_044840 Pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D dnm_005320 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D dnm_073650 cysC; Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_073870 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_010900 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D dnm_079330 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D dnm_063120 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:dmm00460]
D dnm_025980 Putative glutathione hydrolase proenzyme, Ggt-like K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D dnm_005170 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D dnm_024180 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dmm00470]
D dnm_003750 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D dnm_046980 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D dnm_025990 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_026310 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_062900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_054300 purQ; Phosphoribosylformylglycinamidine synthase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D dnm_020170 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D dnm_000520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D dnm_046150 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D dnm_100270 Putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D dnm_008350 Diaminopimelate decarboxylase family protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D dnm_009910 Diaminopimelate decarboxylase family protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:dmm00480]
D dnm_025980 Putative glutathione hydrolase proenzyme, Ggt-like K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D dnm_070750 Hydantoinase/oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D dnm_088920 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D dnm_056460 icd; Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D dnm_007670 Uncharacterized protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D dnm_058180 speE1; Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_061070 speE2; Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D dnm_084820 Spermine/spermidine synthase domain-containing protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D dnm_061660 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_061670 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_072110 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_074790 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:dmm00540]
D dnm_002170 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D dnm_077400 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D dnm_083140 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D dnm_002140 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D dnm_070810 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D dnm_029310 kdsD; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D dnm_024670 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D dnm_024680 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D dnm_084550 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D dnm_060950 3-deoxy-D-manno-octulosonic-acid transferase N-terminal domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D dnm_070800 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D dnm_003470 Lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D dnm_039220 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D dnm_061810 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D dnm_098060 hldE; Bifunctional protein RfaE domain I domain-containing protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D dnm_037400 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D dnm_056430 Bifunctional protein RfaE domain II-containing protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D dnm_055040 Lipopolysaccharide heptosyltransferase II K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D dnm_085500 Glycosyltransferase protein, family 9 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D dnm_055050 Lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D dnm_003450 Glycosyltransferase, family I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D dnm_003430 O-Antigen ligase domain-containing protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:dmm00542]
D dnm_061030 Glycosyl transferase, family IV K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dmm00541]
D dnm_084400 Putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D dnm_008000 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_047080 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_059610 NADH dehydrogenase domain-containing protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D dnm_044510 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D dnm_059590 NADH dehydrogenase domain-containing protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D dnm_017660 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D dnm_004820 NAD(P)-binding domain-containing protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_062250 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_017670 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D dnm_057700 Putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D dnm_017680 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D dnm_090090 RmlD substrate binding domain-containing protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D dnm_045760 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D dnm_009510 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D dnm_009460 fcl; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D dnm_097160 Aminotransferase family protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D dnm_092990 Nucleotidyl transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D dnm_008230 wecB1; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D dnm_039420 pseB; UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D dnm_097000 Polysaccharide biosynthesis protein, CapD-like K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D dnm_096990 NADH dehydrogenase domain-containing protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D dnm_096980 wecB2; UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D dnm_039410 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D dnm_049770 DegT/DnrJ/EryC1/StrS aminotransferase domain-containing protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:dmm00550]
D dnm_022260 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D dnm_000640 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D dnm_000550 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D dnm_000520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D dnm_064370 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D dnm_025990 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_026310 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_062900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_000490 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D dnm_050040 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D dnm_045390 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D dnm_000510 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D dnm_000540 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D dnm_047010 pbpA1; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_089020 pbpA2; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_075160 mrcB; Penicillin-binding 1B protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D dnm_091360 pbpC; Penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D dnm_093120 mrdA; Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D dnm_000480 Putative Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D dnm_063190 Transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D dnm_006270 Peptidase, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D dnm_093160 Beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:dmm00552]
D dnm_045390 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D dnm_061030 Glycosyl transferase, family IV K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:dmm00543]
D dnm_061030 Glycosyl transferase, family IV K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D dnm_038250 O-acyltransferase family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D dnm_100090 Uncharacterized protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D dnm_062860 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D dnm_100020 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dmm00730]
D dnm_073470 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D dnm_015270 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D dnm_062850 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D dnm_089230 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D dnm_073520 thiG; Thiazole synthase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D dnm_012840 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D dnm_012830 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D dnm_012820 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D dnm_032710 rsgA; Ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D dnm_032760 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:dmm00740]
D dnm_024250 ribBA; Riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D dnm_024230 ribD; Riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D dnm_022830 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D dnm_028130 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D dnm_024240 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D dnm_011640 ribF; Bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D dnm_012840 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D dnm_027040 Hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D dnm_034820 Hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D dnm_091520 ubiX; Flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:dmm00750]
D dnm_084670 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D dnm_022990 Pyridoxal-phosphate dependent enzyme domain-containing protein K01733 thrC; threonine synthase [EC:4.2.3.1]
D dnm_063100 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D dnm_073530 pdxS; Pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D dnm_073540 pdxT; Pyridoxal 5'-phosphate synthase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dmm00760]
D dnm_048370 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D dnm_048360 nadA; Quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D dnm_048350 nadC1; putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D dnm_069510 nadC2; putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D dnm_045300 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D dnm_085660 Phosphoesterase and nucleotidase domains-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D dnm_063450 surE; Nucleoside 5'-monophosphate phosphohydrolase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D dnm_000070 HAD hydrolase family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D dnm_048390 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D dnm_036840 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D dnm_021140 Hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D dnm_068210 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D dnm_000230 Sirtuin family NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D dnm_045440 cobB1; Cobyrinic acid a,c-diamide synthase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D dnm_083880 Putative sirtuin family NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D dnm_011300 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D dnm_038790 Methyltransferase domain-containing protein K00541 NNMT; nicotinamide N-methyltransferase [EC:2.1.1.1]
D dnm_064570 Putative 3-methylitaconate isomerase K20451 mii; methylitaconate Delta-isomerase [EC:5.3.3.6]
D dnm_064600 Phosphoenolpyruvate phosphomutase family protein K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
C 00770 Pantothenate and CoA biosynthesis [PATH:dmm00770]
D dnm_015130 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_032190 Thiamine pyrophosphate enzyme family protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D dnm_015120 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D dnm_015110 ilvC; Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D dnm_015180 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D dnm_045680 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D dnm_025910 Putative phenylpyruvate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D dnm_045670 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D dnm_041980 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D dnm_087000 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D dnm_070870 coaBC; Coenzyme A biosynthesis bifunctional protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D dnm_036840 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D dnm_067490 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D dnm_036870 transferase domain-containing protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D dnm_071800 4'-phosphopantetheinyl transferase domain-containing protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D dnm_064100 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084410 ilvE; Branched-chain-amino-acid transaminase 1 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084880 Carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D dnm_049230 panP; Aspartate 1-decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:dmm00780]
D dnm_018320 Beta-ketoacyl-acyl synthase N-terminal domain-containing protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D dnm_091040 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D dnm_023000 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_055550 Beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_058990 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_091060 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_002180 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D dnm_035590 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D dnm_062600 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:dmm00785]
D dnm_049800 lipA4; Lipoyl synthase (lipoate synthase) K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D dnm_048210 lipA3; Lipoyl synthase (lipoate synthase) K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_035370 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D dnm_035380 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D dnm_049830 gcvPA; Glycine cleavage system, dehydrogenase (decarboxylating) protein P subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D dnm_049820 gcvPB; Glycine cleavage system, dehydrogenase (decarboxylating) protein P subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D dnm_067580 gcvT; Glycine cleavage system, aminomethyltransferase protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D dnm_049840 gcvH; Glycine cleavage system, octanoyl/lipoyl carrier protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:dmm00790]
D dnm_006260 folE; GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D dnm_046160 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D dnm_065960 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D dnm_016570 Dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D dnm_032720 folC; Dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D dnm_024250 ribBA; Riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D dnm_006660 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D dnm_090790 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D dnm_090800 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D dnm_062060 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH-dependent nitrile oxidoreductase) K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D dnm_005860 robosomal protein domain-containing protein K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D dnm_011390 Beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D dnm_066470 Beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D dnm_087160 Beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D dnm_097390 ATP-grasp protein K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D dnm_019730 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D dnm_034880 moaC; Molybdopterin biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D dnm_037810 moaB; Molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D dnm_055860 Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D dnm_055890 Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D dnm_069990 Putative molybdopterin molybdenumtransferase, MoeA-like K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D dnm_031920 mobA; Molbdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:dmm00670]
D dnm_016570 Dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D dnm_074850 fhs; Formate-tetrahydrofolate ligase K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3]
D dnm_023930 folD; Bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D dnm_068610 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D dnm_024180 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D dnm_032060 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D dnm_008570 MGS domain-containing protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D dnm_008580 Bifunctional purine biosynthesis protein dimain-containing protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D dnm_068630 ftcD; Formimidoyltetrahydrofolate cyclodeaminase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D dnm_011690 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D dnm_067580 gcvT; Glycine cleavage system, aminomethyltransferase protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D dnm_007360 thymidylate synthase domain-containing protein K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D dnm_095810 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_036670 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_084020 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_095730 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_033650 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D dnm_061270 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dmm00860]
D dnm_090200 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D dnm_001560 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D dnm_039390 Transferase domains-containing protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D dnm_029820 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D dnm_087670 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D dnm_093830 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D dnm_014420 Uncharacterized protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D dnm_087680 hemD; Porphyrin biosynthesis protein K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D dnm_090220 Siroheme synthase family protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D dnm_081690 AsnC-like ligand binding domain-containing protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D dnm_084890 Putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D dnm_040490 12,18-didecarboxysiroheme deacetylase K22226 ahbC; Fe-coproporphyrin III synthase
D dnm_051150 pqqE; PqqA peptide cyclase K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D dnm_048060 Anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D dnm_050830 Cobalt chelatase, CbiK-like K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D dnm_050780 cbiL; Cobalt-precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D dnm_086630 Tetrapyrrole methylase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D dnm_047320 cobJ; Precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D dnm_047300 cobM; Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D dnm_086570 Tetrapyrrole methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D dnm_086580 Tetrapyrrole methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D dnm_047310 Cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D dnm_050750 Methyltransferase family protein, CbiD-like K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D dnm_047290 cbiET; Cobalamin biosynthesis bifunctional protein K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D dnm_050800 cbiC; Cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D dnm_050820 cbiA; Cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D dnm_070950 cobB2; NAD-dependent protein deacylase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D dnm_068890 Chelatase domain-containing protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D dnm_036820 Corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D dnm_093690 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D dnm_093680 cobD; Cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D dnm_029360 Cobinamide kinase/cobinamide phosphate guanyltransferasefamily protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D dnm_029400 Putative adenosylcobinamide-GDP ribazoletransferase, CobS-like K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D dnm_058120 Xylose isomerase domain-containing protein K25496 cbiR; adenosylcobalamin phosphodiesterase
D dnm_082310 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D dnm_029410 Putative threonine-phosphate decarboxylase, CobD-like K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dmm00130]
D dnm_074430 4-Hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D dnm_050660 Prenyltransferase family protein, UbiA-like K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D dnm_050670 Decarboxylase family protein, UbiD-like K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D dnm_091520 ubiX; Flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D dnm_099960 SAM-dependent methyltransferase domain-containing protein K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D dnm_006640 Ubiquinone/menaquinone biosynthesis methyltransferase family protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D dnm_058290 Menaquinone biosynthesis protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D dnm_058280 Radical SAM domain-containing protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D dnm_058300 Radical SAM domain-containing protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D dnm_058310 Menaquinone biosynthesis family protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dmm00900]
D dnm_089230 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D dnm_090900 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D dnm_010780 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D dnm_078700 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D dnm_071910 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D dnm_087870 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_091520 ubiX; Flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D dnm_042080 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D dnm_089260 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D dnm_085090 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D dnm_050040 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D dnm_014850 Peptidase, M48 family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:dmm00907]
D dnm_037070 Pyruvate carboxyltransferase family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D dnm_081650 Pyruvate carboxyltransferase family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D dnm_009440 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D dnm_061930 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:dmm00523]
D dnm_017660 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D dnm_004820 NAD(P)-binding domain-containing protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_062250 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_017670 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D dnm_057700 Putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D dnm_017680 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D dnm_090090 RmlD substrate binding domain-containing protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:dmm01055]
D dnm_004820 NAD(P)-binding domain-containing protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_062250 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_061690 Methyltransferase domain-containing protein K16437 evaC; methylation protein EvaC
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:dmm00332]
D dnm_075500 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D dnm_048380 proA; Gamma-glutamyl phosphate reductase (glutamate-5-semialdehyde dehydrogenase) K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:dmm00261]
D dnm_073650 cysC; Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_073870 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D dnm_019670 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D dnm_006540 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D dnm_055420 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D dnm_054810 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:dmm00521]
D dnm_045380 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D dnm_023010 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D dnm_052160 Inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D dnm_089400 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D dnm_017660 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D dnm_004820 NAD(P)-binding domain-containing protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_062250 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_017670 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D dnm_057700 Putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D dnm_017680 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D dnm_090090 RmlD substrate binding domain-containing protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:dmm00525]
D dnm_017660 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D dnm_004820 NAD(P)-binding domain-containing protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D dnm_062250 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:dmm00401]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_058670 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:dmm00405]
D dnm_064640 trpE; Putative Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D dnm_064650 TrpG; Anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D dnm_046970 Beta-lactamase domain-containing protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
C 00333 Prodigiosin biosynthesis [PATH:dmm00333]
D dnm_038650 Amino acid adenylation domain-containing protein K21780 pigI; L-proline---[L-prolyl-carrier protein] ligase [EC:6.2.1.53]
D dnm_038660 Acyl-CoA dehydrogenase K21782 pigA; L-prolyl-PCP dehydrogenase [EC:1.3.8.14]
D dnm_023000 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_055550 Beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_058990 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_091060 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D dnm_091050 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:dmm00999]
D dnm_041960 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D dnm_033580 aroE1; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D dnm_037750 aroE2; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:dmm00362]
D dnm_009440 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D dnm_014580 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D dnm_087120 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D dnm_074430 4-Hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D dnm_055580 Enoyl-CoA hydratase/isomerase K07537 dch; cyclohexa-1,5-dienecarbonyl-CoA hydratase [EC:4.2.1.100]
D dnm_057830 had; 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase K07538 had; 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase [EC:1.1.1.368]
D dnm_057820 oah; 6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase K07539 oah; 6-oxocyclohex-1-ene-carbonyl-CoA hydrolase [EC:3.7.1.21]
D dnm_009430 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D dnm_014610 acdA1; Acyl-CoA dehydrogenase K16173 acd; glutaryl-CoA dehydrogenase (non-decarboxylating) [EC:1.3.99.32]
D dnm_079260 gcdA; Glutaconyl-CoA decarboxylase, subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D dnm_094120 oadB; Oxaloacetate decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D dnm_036490 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D dnm_054750 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:dmm00627]
D dnm_055070 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D dnm_091520 ubiX; Flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D dnm_091580 Uncharacterized protein K22960 lpdD; gallate decarboxylase subunit D
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:dmm00625]
D dnm_090160 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation [PATH:dmm00623]
D dnm_089690 hbsB; Hydroxybenzylsuccinate synthase activating enzyme K07540 E4.1.99.11; benzylsuccinate synthase [EC:4.1.99.11]
D dnm_089710 hbsC; Hydroxybenzylsuccinate synthase, gamma subunit K07540 E4.1.99.11; benzylsuccinate synthase [EC:4.1.99.11]
D dnm_089790 bhsE; Hydroxybenzylsuccinate CoA-transferase, subunit E K07543 bbsE; benzylsuccinate CoA-transferase BbsE subunit [EC:2.8.3.15]
D dnm_089800 bhsF; Benzylsuccinate CoA-transferase, subunit F K07544 bbsF; benzylsuccinate CoA-transferase BbsF subunit [EC:2.8.3.15]
D dnm_089810 bhsG; Hydroxybenzylsuccinyl-CoA dehydrogenase K07545 bbsG; (R)-benzylsuccinyl-CoA dehydrogenase [EC:1.3.8.3]
D dnm_089830 bhsH; Putative E-phenylitaconyl-CoA hydratase K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180]
D dnm_089750 bhsA; Hydroxybenzylsuccinyl-CoA thiolase, subunit A K07549 bbsA; benzoylsuccinyl-CoA thiolase BbsA subunit [EC:2.3.1.310]
D dnm_089760 bhsB; Hydroxybenzylsuccinyl-CoA thiolase, subunit B K07550 bbsB; benzoylsuccinyl-CoA thiolase BbsB subunit [EC:2.3.1.310]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:dmm00633]
D dnm_013300 cdhA1; Acetyl-CoA decarbonylase/synthase complex, subunit alpha K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_058880 cooS; Carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_066390 cdhA2; Acetyl-CoA decarbonylase/synthase complex, subunit alpha K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D dnm_058860 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D dnm_022420 porA; Pyruvate synthase, subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D dnm_022440 porC; Pyruvate synthase subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D dnm_073380 dsrA; Sulfite reductase, dissimilatory-type, subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D dnm_073370 dsrB; Sulfite reductase, dissimilatory-type, subunit beta K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
D dnm_009440 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
D dnm_076260 Coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D dnm_076270 Coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:dmm00626]
D dnm_090160 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dmm03020]
D dnm_013700 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D dnm_013710 rpoC; DNA-directed RNA polymerase, subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D dnm_014060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D dnm_006230 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D dnm_050580 Helicase family protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dmm03010]
D dnm_051890 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D dnm_076230 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D dnm_050080 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D dnm_013830 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D dnm_014040 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D dnm_013950 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D dnm_028670 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D dnm_013730 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D dnm_013920 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D dnm_079580 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D dnm_013750 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D dnm_014020 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D dnm_013720 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D dnm_014010 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D dnm_013910 rpsZ; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D dnm_094940 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D dnm_033890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D dnm_013860 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D dnm_028660 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D dnm_013810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D dnm_052190 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D dnm_032730 Putative 30S ribosomal protein S21, RpsU-like K02970 RP-S21; small subunit ribosomal protein S21
D dnm_013670 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D dnm_013790 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D dnm_013760 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D dnm_013770 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D dnm_013900 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D dnm_013930 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D dnm_013690 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D dnm_022060 Uncharacterized protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D dnm_028640 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D dnm_077330 Uncharacterized protein K02939 RP-L9; large subunit ribosomal protein L9
D dnm_013680 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D dnm_013660 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D dnm_079590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D dnm_013870 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D dnm_013970 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D dnm_013840 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D dnm_014070 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D dnm_013940 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D dnm_033940 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D dnm_076570 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D dnm_076080 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D dnm_013820 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D dnm_013780 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D dnm_013880 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D dnm_078720 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D dnm_076090 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D dnm_005210 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D dnm_013850 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D dnm_013960 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D dnm_050280 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D dnm_091080 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D dnm_013620 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D dnm_088280 50S ribosomal protein domain-containing protein K02914 RP-L34; large subunit ribosomal protein L34
D dnm_076580 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D dnm_092935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D dnm_092920 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dmm00970]
D dnm_092925 tRNA-Ala3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D dnm_085205 tRNA-Ala2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D dnm_032715 tRNA-Arg4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_026405 tRNA-Arg3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_013535 tRNA-Arg1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_020593 tRNA-Arg2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_034333 tRNA-Asn1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D dnm_034336 tRNA-Asn2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D dnm_041103 tRNA-Asp1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D dnm_041106 tRNA-Asp2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D dnm_034462 tRNA-Cys1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D dnm_034466 tRNA-Cys2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D dnm_078705 tRNA-Gln1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D dnm_091115 tRNA-Gln2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D dnm_020823 tRNA-Glu1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D dnm_031865 tRNA-Glu2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D dnm_094855 tRNA-Gly4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_034464 tRNA-Gly2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_034468 tRNA-Gly3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_013596 tRNA-Gly1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_020596 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D dnm_092930 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D dnm_041145 tRNA-Leu4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_062875 tRNA-Leu8; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_011635 tRNA-Leu1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_030915 tRNA-Leu3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_001575 tRNA-Lys1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D dnm_020826 tRNA-Lys2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D dnm_010655 tRNA-Met1; tRNA-Met K14230 tRNA-Met; tRNA Met
D dnm_062925 tRNA-Met2; tRNA-Met K14230 tRNA-Met; tRNA Met
D dnm_069445 tRNA-Phe2; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D dnm_041170 tRNA-Pro1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D dnm_045050 tRNA-Pro2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D dnm_093180 tRNA-Pro3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D dnm_043606 tRNA-Ser4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_020100 tRNA-Ser2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_020095 tRNA-Ser1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_043603 tRNA-Ser3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_013592 tRNA-Thr1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D dnm_040040 tRNA-Thr3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D dnm_013630 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D dnm_013594 tRNA-Tyr1; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D dnm_089385 tRNA-Val3; tRNA-Val K14237 tRNA-Val; tRNA Val
D dnm_041109 tRNA-Val1; tRNA-Val K14237 tRNA-Val; tRNA Val
D dnm_063515 tRNA-Val2; tRNA-Val K14237 tRNA-Val; tRNA Val
D dnm_058800 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D dnm_066030 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D dnm_058790 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D dnm_066420 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D dnm_024550 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D dnm_034320 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D dnm_000880 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D dnm_055140 glyQ; Glycyl-tRNA synthetase, subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D dnm_055130 glyS; Glycyl--tRNA synthetase, subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D dnm_062480 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D dnm_061280 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D dnm_079330 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D dnm_071750 cysS1; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D dnm_077230 cysS2; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D dnm_063120 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D dnm_011690 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D dnm_069500 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D dnm_052220 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D dnm_046680 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D dnm_079780 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D dnm_058770 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D dnm_005180 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D dnm_066060 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D dnm_073950 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D dnm_076560 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D dnm_076550 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D dnm_092950 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D dnm_063480 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dmm03060]
D dnm_013980 secY; Protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D dnm_013640 Protein translocase subunit, SecE-like K03073 secE; preprotein translocase subunit SecE
D dnm_030910 Protein-export membrane protein family protein, secG K03075 secG; preprotein translocase subunit SecG
D dnm_052360 secD; Protein translocase subunit D K03072 secD; preprotein translocase subunit SecD
D dnm_052370 secF; Protein translocase subunit F K03074 secF; preprotein translocase subunit SecF
D dnm_052350 yajC; Sec translocon accessory complex subunit K03210 yajC; preprotein translocase subunit YajC
D dnm_088310 Putative membrane protein insertase, YidC-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D dnm_028030 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D dnm_033880 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D dnm_023730 ftsY; Signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D dnm_065410 Sec-independent protein translocase protein domain-containing protein K03116 tatA; sec-independent protein translocase protein TatA
D dnm_034840 Protein transocase domain-containing protein K03117 tatB; sec-independent protein translocase protein TatB
D dnm_034830 tatC; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
D dnm_011560 Putative signal peptidase, LepB-like K03100 lepB; signal peptidase I [EC:3.4.21.89]
D dnm_045940 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D dnm_046660 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dmm04122]
D dnm_062850 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D dnm_091990 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D dnm_019730 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D dnm_085030 THIF-type NAD/FAD binding fold-containing protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D dnm_088010 THIF-type NAD/FAD binding fold-containing protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D dnm_071880 Rhodanese-like and rubrerythrin domains-containing protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D dnm_034880 moaC; Molybdopterin biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D dnm_037810 moaB; Molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D dnm_040410 Sulfur carrier ThiS/MoaD-like family protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:dmm03018]
D dnm_052310 Ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D dnm_014920 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D dnm_094950 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D dnm_076420 cshA; DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D dnm_091670 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D dnm_094500 Putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D dnm_050290 rho; Transcription termination factor K03628 rho; transcription termination factor Rho
D dnm_092960 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D dnm_012410 rnjA; Robonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_002330 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_007960 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_020320 Putative chaperone protein, DnaK-like K04043 dnaK; molecular chaperone DnaK
D dnm_025770 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045030 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045810 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_052840 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_066010 dnaK; Chaperone Hsp70 family K04043 dnaK; molecular chaperone DnaK
D dnm_068440 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068480 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068500 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_098010 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_088700 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnm_079450 Poly A polymerase head and HD domains-containing K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dmm03030]
D dnm_065670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnm_020110 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnm_063410 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnm_063220 DNA polymerase III N-terminal domain-containing protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnm_006400 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnm_028630 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D dnm_010620 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D dnm_047990 ssb; single-stranded DNA-binding protein, helix-destabilizing K03111 ssb; single-strand DNA-binding protein
D dnm_054770 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D dnm_033950 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D dnm_080790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D dnm_055080 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_098170 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dmm03410]
D dnm_076700 Putative endonuclease III, Nth-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D dnm_031290 Adenine DNA glycosylase domain-containing protein, MutY-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D dnm_100400 Putative DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D dnm_063730 DNA-3-methyladenine glycosylase 1, Tag-like K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D dnm_070860 Uracil DNA glycolyase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D dnm_088570 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D dnm_080790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D dnm_083670 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D dnm_055080 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_098170 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dmm03420]
D dnm_040050 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D dnm_070440 uvrA; UvrABC system, protein A K03701 uvrA; excinuclease ABC subunit A
D dnm_070360 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D dnm_076180 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D dnm_023670 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_027100 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_030730 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_080790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D dnm_055080 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_098170 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_050580 Helicase family protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:dmm03430]
D dnm_082690 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D dnm_045820 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D dnm_023670 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_027100 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_030730 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_079140 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D dnm_089290 xseA; Exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D dnm_089280 xseB; Exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D dnm_083670 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D dnm_047990 ssb; single-stranded DNA-binding protein, helix-destabilizing K03111 ssb; single-strand DNA-binding protein
D dnm_065670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnm_006400 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnm_020110 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnm_063220 DNA polymerase III N-terminal domain-containing protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnm_063410 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnm_055080 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_098170 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_010570 SAM-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:dmm03440]
D dnm_083670 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D dnm_047990 ssb; single-stranded DNA-binding protein, helix-destabilizing K03111 ssb; single-strand DNA-binding protein
D dnm_060320 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D dnm_020130 recR; Recombination protein K06187 recR; recombination protein RecR
D dnm_024560 recA; Recombinase A K03553 recA; recombination protein RecA
D dnm_080790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D dnm_035640 ruvA; Holliday junction ATP-dependent DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D dnm_079370 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D dnm_035650 ruvC; Crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D dnm_002100 Schlafen AAA domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_024440 Schlafen and ATP-dependent DNA helicase domains-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_054930 Schlafen and ATP-dependent DNA helicase domains-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_080400 ATP-dependent DNA helicase RecG C-terminal domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_018670 recB; Exodeoxyribonuclease V, subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D dnm_049980 recC; Exodeoxyribonuclease V, subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D dnm_018690 recD; Exodeoxyribonuclease V, subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D dnm_049990 ATP-dependent DNA helicase RecD domain-containing protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D dnm_065670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnm_006400 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnm_020110 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnm_063220 DNA polymerase III N-terminal domain-containing protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnm_063410 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnm_010890 priA; Primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D dnm_061660 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_061670 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_072110 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_074790 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:dmm03250]
D dnm_077980 Peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dmm02010]
D dnm_002270 Periplasmic binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D dnm_094410 putative ABC transporter, permease protein MetI-like K05773 tupB; tungstate transport system permease protein
D dnm_099570 putative ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D dnm_020870 Molybdate/tungstate-binding protein, WtpA-like K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D dnm_020860 putative ABC transporter, permease protein MetI-like K15496 wtpB; molybdate/tungstate transport system permease protein
D dnm_020850 wtpC; Molybdate/tungstate import ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D dnm_071230 modA; Molybdate ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein
D dnm_071220 modB; Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D dnm_071180 AAA ATPase domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D dnm_019300 Glycine betaine/proline betaine transport system, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D dnm_029830 Glycine betaine/proline betaine transport system, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D dnm_019320 Glycine betaine/proline betaine transport system, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D dnm_029840 Glycine betaine/proline betaine transport system, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D dnm_030090 Uncharacterized protein K02001 proW; glycine betaine/proline transport system permease protein
D dnm_019330 Glycine betaine/proline betaine transport system, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D dnm_029850 Glycine betaine/proline betaine transport system, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D dnm_029760 Glycine betaine/proline betaine transport system, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D dnm_029780 Glycine betaine/proline betaine transport system, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D dnm_049690 mlaC; Intermembrane phospholipid transport system binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D dnm_049700 mlaD; Intermembrane phospholipid transport system binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D dnm_053640 MlaD protein domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D dnm_049720 mlaE; Intermembrane phospholipid transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D dnm_061600 putative ABC transport system, permease protein, STAS domain-containing K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D dnm_049710 mlaF; Intermembrane phospholipid transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D dnm_053650 putative ABC transport system, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D dnm_082950 ABC transporter, substrate-binding protein, PnrA-like K07335 bmpA; basic membrane protein A and related proteins
D dnm_083010 Branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D dnm_083020 Branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D dnm_082970 putative ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D dnm_073600 Periplasmic binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D dnm_011140 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_011190 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_013110 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_030300 PBM domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_046260 PBM domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063920 pstS1; Phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063970 pstS2; Phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063930 Phosphate transport system, permease protein, PstC-like K02037 pstC; phosphate transport system permease protein
D dnm_063990 pstC; Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D dnm_063940 Phosphate ABC transporter, permease protein PstA-like K02038 pstA; phosphate transport system permease protein
D dnm_064000 pstA; Phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D dnm_063950 Phosphate ABC transporter, ATP-binding protein PstB-like K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D dnm_064010 pstB; Phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D dnm_057600 phnD; Phosphonates-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D dnm_085670 Amino acid ABC transporter, substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D dnm_010250 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_011280 Amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_020970 Periplasmic binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_022760 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_037680 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_043340 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_061700 Amino acid ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_065900 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_070700 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_077130 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_077140 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_010270 putative ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D dnm_011260 Amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D dnm_011250 Amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D dnm_083220 putative ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D dnm_011240 livG; High-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D dnm_083230 putative ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D dnm_011230 Amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D dnm_014500 Amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D dnm_038390 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_099710 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_087520 putative ABC transporter, substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D dnm_013050 putative ABC transporter, permease protein MetI-like K13894 yejB; microcin C transport system permease protein
D dnm_087510 putative ABC transporter, permease protein MetI-like K13895 yejE; microcin C transport system permease protein
D dnm_087530 gsiA; Glutathione import ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D dnm_079910 Putative zinc ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D dnm_079930 Zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D dnm_079920 Zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D dnm_028690 Metal transport protein domain-containing protein K02007 cbiM; cobalt/nickel transport system permease protein
D dnm_091960 Putative cobalt transport protein, CbiQ-like K02008 cbiQ; cobalt/nickel transport system permease protein
D dnm_091950 putative ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D dnm_028700 DUF4198 K10094 cbiK; nickel transport protein
D dnm_028680 Uncharacterized protein K16915 cbiL; nickel transport protein
D dnm_086350 Uncharacterized protein K16915 cbiL; nickel transport protein
D dnm_035600 bioY; Biotin transporter K03523 bioY; biotin transport system substrate-specific component
D dnm_035530 ABC transporter, permease protein domain-containing protein K16783 bioN; biotin transport system permease protein
D dnm_035540 putative ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D dnm_004690 putative ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D dnm_004680 putative ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D dnm_083100 lolC; Lipoprotein-releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D dnm_083110 Putative lipoprotein-releasing system, ATP-binding protein, LolD-like K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D dnm_066300 Permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D dnm_003490 lptG; ABC-type lipopolysaccharide export system, permease protein K11720 lptG; lipopolysaccharide export system permease protein
D dnm_024740 lptB; Lipopolysaccharide export system, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D dnm_090290 Putative cell division protein, FtsX-like K09811 ftsX; cell division transport system permease protein
D dnm_090300 Putve cell division ATP-binding protein, FtsE-like K09812 ftsE; cell division transport system ATP-binding protein
D dnm_003510 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D dnm_097810 putative ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D dnm_029520 putative ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D dnm_029530 putative ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D dnm_059940 Cyclic nucleotdide binding and ABC transporter permease domains-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
C 02060 Phosphotransferase system (PTS) [PATH:dmm02060]
D dnm_054160 ptsP; Phosphoenolpyruvate-dependent phosphotransferase system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D dnm_054150 ptsH; Phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D dnm_024800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_072850 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_073430 Putative phosphoenolpyruvate-protein phosphotransferase, PtsI-like K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D dnm_002570 Phosphotransferase domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D dnm_024770 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D dnm_072770 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2-type domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:dmm03070]
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_059910 HylD family secretion domain-containing protein K11003 hlyD; membrane fusion protein, hemolysin D
D dnm_059940 Cyclic nucleotdide binding and ABC transporter permease domains-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D dnm_005020 gspD; General secrestion pathway protein D K02453 gspD; general secretion pathway protein D
D dnm_093330 Putative general secretion pathway protein D, GspD-like K02453 gspD; general secretion pathway protein D
D dnm_093310 Putative general secretion pathway protein C, GspC-like K02452 gspC; general secretion pathway protein C
D dnm_093190 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D dnm_007040 gspG; Type II secretion system protein G K02456 gspG; general secretion pathway protein G
D dnm_093200 Type II secretion system protein G domain-containing K02456 gspG; general secretion pathway protein G
D dnm_093210 Putative general secretion pathway protein G, GspG-like K02456 gspG; general secretion pathway protein G
D dnm_007030 Type II secretion system protein, GspH-like K02457 gspH; general secretion pathway protein H
D dnm_003380 Prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D dnm_093240 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02458 gspI; general secretion pathway protein I
D dnm_093250 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02459 gspJ; general secretion pathway protein J
D dnm_005080 Type II secretion system protein, protein K K02460 gspK; general secretion pathway protein K
D dnm_093260 Type II secretion system protein G domain-containing K02460 gspK; general secretion pathway protein K
D dnm_093270 Pilus assembly protein domain-containing protein K02461 gspL; general secretion pathway protein L
D dnm_005060 Type II secretion system protein, protein M K02462 gspM; general secretion pathway protein M
D dnm_093280 Type II secretion system protein M domain-containing protein K02462 gspM; general secretion pathway protein M
D dnm_052530 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D dnm_093370 Putative general secretion pathway protein E, GspE-like K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D dnm_052360 secD; Protein translocase subunit D K03072 secD; preprotein translocase subunit SecD
D dnm_052370 secF; Protein translocase subunit F K03074 secF; preprotein translocase subunit SecF
D dnm_013640 Protein translocase subunit, SecE-like K03073 secE; preprotein translocase subunit SecE
D dnm_030910 Protein-export membrane protein family protein, secG K03075 secG; preprotein translocase subunit SecG
D dnm_013980 secY; Protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D dnm_052350 yajC; Sec translocon accessory complex subunit K03210 yajC; preprotein translocase subunit YajC
D dnm_088310 Putative membrane protein insertase, YidC-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D dnm_028030 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D dnm_023730 ftsY; Signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D dnm_033880 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D dnm_065410 Sec-independent protein translocase protein domain-containing protein K03116 tatA; sec-independent protein translocase protein TatA
D dnm_034840 Protein transocase domain-containing protein K03117 tatB; sec-independent protein translocase protein TatB
D dnm_034830 tatC; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
D dnm_018290 Type VI secretion protein domain-containing protein, RhsGE-like K11904 vgrG; type VI secretion system secreted protein VgrG
D dnm_018140 Type VI secretion protein domain-containing protein, Hcp-like K11903 hcp; type VI secretion system secreted protein Hcp
D dnm_017850 Type VI secretion system protein domain-containing protein, IcmF-like K11891 impL; type VI secretion system protein ImpL
D dnm_017830 Type VI secretion system protein, DotU-like K11892 impK; type VI secretion system protein ImpK
D dnm_018280 Chaperone protein ClpB K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dmm02020]
D dnm_020820 Two component system histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D dnm_064070 Putative alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D dnm_020800 Two component system response regulator, DNA-binding domain-containing K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D dnm_064030 Two component system response regulator, DNA-binding domain-containing K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D dnm_011140 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_011190 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_013110 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_030300 PBM domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_046260 PBM domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063920 pstS1; Phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063970 pstS2; Phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_020930 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_078690 degP; Periplasmic serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_016460 Two component system histidine kinase, HAMP domain-containing K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D dnm_016470 Two component system response regulator, BaeR-like K07664 baeR; two-component system, OmpR family, response regulator BaeR
D dnm_083580 Two component system response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D dnm_092400 dnaA; Chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D dnm_059780 TonB-dependent receptor domain-containing protein K19611 fepA; ferric enterobactin receptor
D dnm_095620 Two component system histidine kinase, PAS domain-containing K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D dnm_026620 Two component system response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D dnm_022800 Two component system response regulator, LuxR domains-containing K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D dnm_063850 Two component system response regulator, LuxR domain-containing K07696 nreC; two-component system, NarL family, response regulator NreC
D dnm_065830 Two component system response regulator, LuxR domain-containing K07696 nreC; two-component system, NarL family, response regulator NreC
D dnm_027620 Putative Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D dnm_027710 Pilus formation protein domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D dnm_091270 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D dnm_074720 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D dnm_070620 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_074730 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_077380 Two component system histidine kinase, HAMP and PAS domain-containing K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D dnm_067470 Two component system response regulator, sigma factor 54 interaction domain-containing K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D dnm_061290 Transcriptional regulator related to NifA, Fis family K02584 nifA; Nif-specific regulatory protein
D dnm_058430 Two component system histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D dnm_062390 Metal-binding domain-containing protein K07803 zraP; zinc resistance-associated protein
D dnm_002760 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_017010 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_026940 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_027260 Sigma-54 interaction domain-containing protein K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_063800 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_071840 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_079500 Two component system response regulator, sigma54-specific K02667 pilR; two-component system, NtrC family, response regulator PilR
D dnm_024750 rpoN; RNA polymerase sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D dnm_084710 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D dnm_012720 Chemotaxis protein methyltransferase, CheR-like K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_012730 Chemotaxis protein methyltransferase, CheR-like K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_032570 SAM-dependent methyltransferase domain-containing protein, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_040890 cheR1; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_044710 cheR2; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_065430 cheR3; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_067250 cheR4; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_056010 Protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D dnm_000810 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_003030 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_003400 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_011120 Methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_011180 Methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_012700 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_013080 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_016900 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_022500 Methyl-accepting chemotaxis protein, double Cache and HAMP domains-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_024060 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_026350 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_027050 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_027350 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_029280 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_029510 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_032390 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_032780 PAS and HAMP domains-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_034100 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_034130 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_036860 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_037650 Methyl-accepting chemotaxis protein domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_037700 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_040700 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_041070 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043320 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043700 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043710 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043730 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043900 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043920 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043940 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_044670 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_044690 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_045090 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046200 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046300 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046920 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_047110 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_051220 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_052250 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_054880 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_056030 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_056810 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_057590 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_061540 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_063560 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_063680 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_065450 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_068170 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_069770 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_070330 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_070420 Methyl-accepting chemotaxis protein signailing domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_074860 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_074880 Methyl-accepting chemotaxis protein, HlyB domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_076730 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_079310 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_079440 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_081710 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_082840 Methyl-accepting chemotaxis protein signailing domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_084360 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_087020 Methyl-accepting chemotaxis protein signailingdomain-containing protein, HAMP and double Cache domains-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_089560 Methyl-accepting chemotaxis protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_091700 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_095080 Methyl-accepting chemotaxis protein domain-containing protein, single Cache and HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_099400 Methyl-accepting chemotaxis protein signailling domain-containing protein, single cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_100190 Methyl-accepting chemotaxis protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_028330 CheW-like domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_033000 cheW1; Chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_040710 cheW4; Chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_043690 cheW5; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_044640 cheW6; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_046910 CheW-like domain containing-protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_047100 cheW7; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_065470 Chemotaxis protein, CheW/CheV-like K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_067140 cheW8; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_072100 CheW domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_087040 cheW9; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_012740 Two component system histidine kinase, CheA and CheW domains-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_040750 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_041060 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_043950 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_044630 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_046900 Two component system histidine kinase, Hpt domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_053810 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_056970 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_063710 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_065480 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_087070 Two component system histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_029370 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_032690 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040780 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040970 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041010 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041040 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041050 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_043960 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_061320 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_084530 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_085900 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_087050 Chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_012650 cheB1; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_040720 cheB3; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_044700 cheB4; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052730 cheB5; Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052750 Two component system response regulator/histidine kinase, CheB domain-containing K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_065440 cheB6; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_067240 cheB7; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_028210 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K02660 pilJ; twitching motility protein PilJ
D dnm_028280 Two component system response regulator/histidine kinase, CheW domain-containing K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D dnm_028380 Two component system response regulator, DUF4388 K02657 pilG; twitching motility two-component system response regulator PilG
D dnm_028220 Signal transduction response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_028340 Two component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_034030 Tetratricopeptide repeat-containing protein, DUF560 K13486 wspC; chemotaxis protein methyltransferase WspC
D dnm_034140 Methyl-accepting chemotaxis protein signailing-domain containing protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D dnm_034020 cheW2; Chemotaxis protein K13488 wspB; chemotaxis-related protein WspB
D dnm_034040 cheW3; Chemotaxis protein K13489 wspD; chemotaxis-related protein WspD
D dnm_034060 Histidine kinase, CheW domain-containing K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D dnm_034150 cheB2; Protein-glutamate methylesterase/protein-glutamine glutaminase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D dnm_041180 Two component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D dnm_074340 rrf; Response regulator protein K11443 divK; two-component system, cell cycle response regulator DivK
D dnm_092180 Two component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D dnm_014640 C4-dicarboxylate TRAP transporter DctQ domain-containing protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D dnm_000340 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_014690 Transcriptional regulator, Crp-type K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_015340 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_015470 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_041990 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_045040 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_060940 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_061990 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_062000 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_065320 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_080750 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_084390 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_087860 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_092560 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_093940 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_017420 Double cache domain-containing protein K08738 CYC; cytochrome c
D dnm_018720 Double Cache domain-containing protein K08738 CYC; cytochrome c
D dnm_079430 Double cache domain-containing protein K08738 CYC; cytochrome c
D dnm_081730 Single Cache domain-containing protein K08738 CYC; cytochrome c
D dnm_085570 cydA; Cytochrome bd ubiquinol oxidase, subunit alpha K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D dnm_085560 cydB; Cytochrome bd ubiquinol oxidase, subunit beta K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_015220 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D dnm_015480 Polysaccharide export protein domain-containing K01991 wza; polysaccharide biosynthesis/export protein
D dnm_060500 Putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D dnm_068080 Polysaccharide export protein domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D dnm_008230 wecB1; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dmm02024]
D dnm_064640 trpE; Putative Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D dnm_064650 TrpG; Anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D dnm_046970 Beta-lactamase domain-containing protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D dnm_045160 Glycosyltransferase domain-containing protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D dnm_003660 Putative 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, LsrF-like K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D dnm_063690 extracellular binding protein domain-containing protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D dnm_010250 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_011280 Amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_020970 Periplasmic binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_022760 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_037680 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_043340 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_061700 Amino acid ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_065900 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_070700 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_077130 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_077140 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_010270 putative ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D dnm_011260 Amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D dnm_011250 Amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D dnm_083220 putative ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D dnm_011240 livG; High-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D dnm_083230 putative ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D dnm_011230 Amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D dnm_014500 Amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D dnm_071370 Immunoglobulin repeat-containing protein K20276 bapA; large repetitive protein
D dnm_023080 AMP-dependent synthetase/ligase family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_061130 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_065910 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_072360 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_096520 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_000340 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_014690 Transcriptional regulator, Crp-type K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_015340 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_015470 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_041990 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_045040 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_060940 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_061990 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_062000 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_065320 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_080750 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_084390 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_087860 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_092560 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_093940 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_024230 ribD; Riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D dnm_053430 putative RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D dnm_038390 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_099710 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_026570 Extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_037220 Extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_002690 putative ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_002840 putative ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_086140 Uncharacterized protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D dnm_086090 Uncharacterized protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D dnm_088310 Putative membrane protein insertase, YidC-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D dnm_013640 Protein translocase subunit, SecE-like K03073 secE; preprotein translocase subunit SecE
D dnm_030910 Protein-export membrane protein family protein, secG K03075 secG; preprotein translocase subunit SecG
D dnm_013980 secY; Protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D dnm_052350 yajC; Sec translocon accessory complex subunit K03210 yajC; preprotein translocase subunit YajC
D dnm_028030 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D dnm_023730 ftsY; Signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D dnm_033880 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D dnm_026620 Two component system response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:dmm02030]
D dnm_000810 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_003030 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_003400 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_011120 Methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_011180 Methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_012700 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_013080 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_016900 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_022500 Methyl-accepting chemotaxis protein, double Cache and HAMP domains-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_024060 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_026350 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_027050 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_027350 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_029280 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_029510 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_032390 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_032780 PAS and HAMP domains-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_034100 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_034130 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_036860 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_037650 Methyl-accepting chemotaxis protein domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_037700 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_040700 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_041070 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043320 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043700 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043710 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043730 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043900 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043920 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043940 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_044670 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_044690 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_045090 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046200 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046300 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046920 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_047110 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_051220 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_052250 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_054880 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_056030 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_056810 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_057590 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_061540 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_063560 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_063680 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_065450 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_068170 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_069770 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_070330 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_070420 Methyl-accepting chemotaxis protein signailing domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_074860 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_074880 Methyl-accepting chemotaxis protein, HlyB domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_076730 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_079310 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_079440 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_081710 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_082840 Methyl-accepting chemotaxis protein signailing domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_084360 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_087020 Methyl-accepting chemotaxis protein signailingdomain-containing protein, HAMP and double Cache domains-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_089560 Methyl-accepting chemotaxis protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_091700 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_095080 Methyl-accepting chemotaxis protein domain-containing protein, single Cache and HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_099400 Methyl-accepting chemotaxis protein signailling domain-containing protein, single cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_100190 Methyl-accepting chemotaxis protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_073600 Periplasmic binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D dnm_012740 Two component system histidine kinase, CheA and CheW domains-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_040750 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_041060 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_043950 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_044630 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_046900 Two component system histidine kinase, Hpt domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_053810 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_056970 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_063710 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_065480 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_087070 Two component system histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_028330 CheW-like domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_033000 cheW1; Chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_040710 cheW4; Chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_043690 cheW5; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_044640 cheW6; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_046910 CheW-like domain containing-protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_047100 cheW7; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_065470 Chemotaxis protein, CheW/CheV-like K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_067140 cheW8; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_072100 CheW domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_087040 cheW9; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_029370 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_032690 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040780 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040970 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041010 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041040 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041050 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_043960 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_061320 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_084530 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_085900 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_087050 Chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_029380 CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040790 Chemotaxis protein CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040810 Chemotaxis protein CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040840 CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040990 STAS domain-containing protein K03409 cheX; chemotaxis protein CheX
D dnm_012650 cheB1; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_040720 cheB3; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_044700 cheB4; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052730 cheB5; Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052750 Two component system response regulator/histidine kinase, CheB domain-containing K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_065440 cheB6; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_067240 cheB7; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_056010 Protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D dnm_012630 Putative chemoreceptor glutamine deamidase, CheD-like K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_012680 cheD1; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_012710 cheD2; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_047090 Putative chemoreceptor glutamine deamidase, CheD-like K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_064410 Putative chemoreceptor glutamine deamidase, CheD-like K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_012720 Chemotaxis protein methyltransferase, CheR-like K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_012730 Chemotaxis protein methyltransferase, CheR-like K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_032570 SAM-dependent methyltransferase domain-containing protein, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_040890 cheR1; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_044710 cheR2; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_065430 cheR3; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_067250 cheR4; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C 02040 Flagellar assembly [PATH:dmm02040]
D dnm_010650 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D dnm_024750 rpoN; RNA polymerase sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D dnm_014920 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:dmm04980]
D dnm_059110 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D dnm_059120 sbm; Methylmalonyl-CoA mutase-like K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:dmm01501]
D dnm_086500 MFS domain-containing protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D dnm_094810 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D dnm_038390 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_099710 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_018050 Release factor family protein, RctB-like K18148 rtcB; release factor H-coupled RctB family protein
D dnm_015850 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_038950 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_075270 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_097310 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_015840 Acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D dnm_053430 putative RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_047010 pbpA1; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_089020 pbpA2; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_093120 mrdA; Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D dnm_000480 Putative Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:dmm01502]
D dnm_025990 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_026310 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_062900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_003750 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D dnm_000490 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D dnm_000510 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D dnm_000540 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dmm01503]
D dnm_082710 amiC; N-acetylmuramoyl-L-alanine amidase catalytic domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D dnm_020930 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_078690 degP; Periplasmic serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_077980 Peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D dnm_015850 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_038950 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_075270 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_097310 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_015840 Acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_002170 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dmm01000]
C 01001 Protein kinases [BR:dmm01001]
D dnm_003690 Putative protein kinase, CHASE2 and tetratricopeptide domains-containing K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_014660 Cyclase and kinase domains-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_020990 Protein kinase domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_021490 Protein kinase domain-containing protein, DUF1566 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_032120 Cyclic nucleotide-binding domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_037890 Protein kinase, Zinc finger domain-containing and double Cache domain-containing K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_056400 Protein kinase domain-containing protein, DUF1566 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_095270 Tetratricopeptide repeat-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D dnm_004160 HipA kinase-like domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D dnm_069330 HipA-like N-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D dnm_069340 HipA-like C-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D dnm_034350 Histidine kinase domain-containing protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D dnm_040920 Histidine kinase superfamily protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D dnm_065490 Histidine kinase and STAS domains-containing protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D dnm_071420 rsbW; Serine-protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D dnm_015230 Kinase domain-containing protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D dnm_015390 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D dnm_015400 Capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D dnm_060450 AAA ATPase-like domain-containing protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D dnm_020820 Two component system histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D dnm_064070 Putative alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D dnm_016460 Two component system histidine kinase, HAMP domain-containing K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D dnm_042910 Histidine kinase domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D dnm_095620 Two component system histidine kinase, PAS domain-containing K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D dnm_077380 Two component system histidine kinase, HAMP and PAS domain-containing K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D dnm_058430 Two component system histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D dnm_000990 Two component system response regulator/histidine kinase, PAS domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_017000 Two component system histidine kinase, PAS domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_019910 Two component system histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_050410 Two component system response regulator/histidine kinase, PAS domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_051010 Two component system response regulator/histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_056170 Two component system histidine kinase, double Cache domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_063790 Two component system histidine kinase, HAMP domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_065880 Histidine kinase, double Cache and PAS domains-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_083560 Two component system histidine kinase, double Cache domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_083810 Two component system histidine kinase, double Cache domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_012740 Two component system histidine kinase, CheA and CheW domains-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_040750 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_041060 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_043950 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_044630 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_046900 Two component system histidine kinase, Hpt domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_053810 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_056970 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_063710 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_065480 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_087070 Two component system histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_028280 Two component system response regulator/histidine kinase, CheW domain-containing K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D dnm_034060 Histidine kinase, CheW domain-containing K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D dnm_006030 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_006050 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_011550 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_020720 Two component system histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_021030 Two component system response regulator/histidine kinase, PAS and GAF domains-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_033050 Two component system response regulator/histidine kinase, HAMP domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_037210 Two component system response regulator/histidine kinase, PAS and HAMP domains-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_041210 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_046000 Two component system response regulator/histidine kinase, CHASE2 domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_047350 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_055330 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_061360 Two component system response regulator/histidine kinase, PAS domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_064180 Two component system response regulator/histidine kinase, PAS domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_080820 Two component system response regulator/histidine kinase, HAMP domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_085890 Two component sstem response regulator/histidine kinase, EAL domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_093790 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_096180 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:dmm01009]
D dnm_041950 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_049240 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D dnm_003710 Phosphatase, PPM-type K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D dnm_079230 Protein phosphatase domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:dmm01002]
D dnm_046660 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D dnm_006120 pilD; Type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D dnm_027630 Prepilin endopeotidase domain-containing protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D dnm_017330 Peptidase, C1A family K01363 CTSB; cathepsin B [EC:3.4.22.1]
D dnm_082430 Putative peptidoglycan binding domain-containing protein K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D dnm_094170 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D dnm_014990 Endopeptidase NLPC/P60 domain-containing protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D dnm_061420 Endopeptidase NLPC/P60 domain-containing protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D dnm_012750 putative endopeptidase, NLPC/P60 K13695 nlpC; probable lipoprotein NlpC
D dnm_015330 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D dnm_087220 Glutamate synthase protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D dnm_063020 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D dnm_012070 asnB1; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_016270 asnB2; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_016290 asnB3; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_073570 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_100060 asnB4; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D dnm_062360 Metalloprotease domain-containing protein K07052 K07052; CAAX protease family protein
D dnm_091000 CAAX prenyl protease-related protein K07052 K07052; CAAX protease family protein
D dnm_067860 Peptidase, M16 family K06972 PITRM1; presequence protease [EC:3.4.24.-]
D dnm_061880 Peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D dnm_088920 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D dnm_045970 Putative peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D dnm_026740 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D dnm_022560 Aminopeptidase family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D dnm_065970 ftsH; ATP-dependent zinc metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D dnm_014850 Peptidase, M48 family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D dnm_090890 Zinc metallopeptidase, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D dnm_038890 HylD family secretion domain-containing protein K16922 yydH; putative peptide zinc metalloprotease protein
D dnm_097440 HylD family secretion domain-containing protein K16922 yydH; putative peptide zinc metalloprotease protein
D dnm_017020 Peptidase, M54 family K06974 amzA; archaemetzincin [EC:3.4.-.-]
D dnm_013490 Peptidase, M74 family K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D dnm_019950 Uncharacterized protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D dnm_020930 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_078690 degP; Periplasmic serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_002940 Peptidase S8/S53 domain-containing protein K01342 aprE; subtilisin [EC:3.4.21.62]
D dnm_002930 Peptidase S8/S53 domain-containing protein K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D dnm_093160 Beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D dnm_006270 Peptidase, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D dnm_041130 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D dnm_006140 lon1; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D dnm_037470 lon2; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D dnm_041110 lon3; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D dnm_057460 ATP-dependent Lon protease domain-containing K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D dnm_086080 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D dnm_011560 Putative signal peptidase, LepB-like K03100 lepB; signal peptidase I [EC:3.4.21.89]
D dnm_045940 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D dnm_033550 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D dnm_090260 Peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D dnm_034800 sppA1; Signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D dnm_072880 sppA2; Signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D dnm_093170 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D dnm_071130 hslV; ATP-dependent protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D dnm_025980 Putative glutathione hydrolase proenzyme, Ggt-like K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D dnm_037930 Peptidase U32 domain-containing protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D dnm_068270 Peptidase U32 domain-containing protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D dnm_081810 Putative modulator of DNA gyrase K03592 pmbA; PmbA protein
D dnm_026800 Putative modulator of DNA gyrase K03568 tldD; TldD protein
D dnm_095230 Macroglobulin domain-containing protein K06894 yfhM; alpha-2-macroglobulin
D dnm_088640 hflC; Protein HflC K04087 hflC; modulator of FtsH protease HflC
D dnm_088630 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:dmm01003]
D dnm_008390 Glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D dnm_061660 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_061670 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_072110 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_074790 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_015250 Tetratricopeptide repeat-containing protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D dnm_080960 Tetratricopeptide repeat-containing protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D dnm_084750 Glycosyltransferase domain-containing protein, tetratricopeptide repeat-containing K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D dnm_084760 Tetratricopeptide repeat-containing protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D dnm_084770 Glycosyltransferase domain-containing protein, tetratricopeptide repeat-containing K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D dnm_084790 Glycosyltransferase domain-containing protein, tetratricopeptide repeat-containing K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D dnm_012600 Putative glycogen synthase, GlgA-like K00703 glgA; starch synthase [EC:2.4.1.21]
D dnm_091360 pbpC; Penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D dnm_075160 mrcB; Penicillin-binding 1B protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D dnm_047010 pbpA1; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_089020 pbpA2; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_061030 Glycosyl transferase, family IV K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D dnm_056230 Glycosyl transferase domain-containing protein, family I K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
D dnm_067040 Glycosyltransferase family I N-terminal domain-containing protein K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
D dnm_059560 Glycosyltransferase, family II K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dmm01005]
D dnm_002170 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D dnm_002140 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D dnm_077400 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D dnm_083140 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D dnm_070810 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D dnm_003470 Lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D dnm_060950 3-deoxy-D-manno-octulosonic-acid transferase N-terminal domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D dnm_070800 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D dnm_065170 DegT/DnrJ/EryC1/StrS aminotransferase domain-containing protein K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109]
D dnm_075570 Adh; Iron-containing alcohol dehydrogenase K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48]
D dnm_024670 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D dnm_084550 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D dnm_024680 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D dnm_029310 kdsD; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D dnm_056430 Bifunctional protein RfaE domain II-containing protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D dnm_055040 Lipopolysaccharide heptosyltransferase II K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D dnm_085500 Glycosyltransferase protein, family 9 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D dnm_055050 Lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D dnm_003450 Glycosyltransferase, family I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D dnm_003430 O-Antigen ligase domain-containing protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D dnm_039220 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D dnm_061810 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D dnm_037400 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D dnm_098060 hldE; Bifunctional protein RfaE domain I domain-containing protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D dnm_045160 Glycosyltransferase domain-containing protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D dnm_061030 Glycosyl transferase, family IV K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dmm01011]
D dnm_022260 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D dnm_000640 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D dnm_000550 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D dnm_000520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D dnm_064370 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D dnm_025990 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_026310 D-alanine--D-alanine ligase domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_062900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dnm_003750 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D dnm_020170 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D dnm_093170 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D dnm_000510 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D dnm_000540 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D dnm_045390 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D dnm_049790 murJ; putative lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D dnm_047010 pbpA1; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_089020 pbpA2; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D dnm_075160 mrcB; Penicillin-binding 1B protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D dnm_091360 pbpC; Penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D dnm_093120 mrdA; Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D dnm_000480 Putative Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D dnm_063190 Transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D dnm_006270 Peptidase, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D dnm_093160 Beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D dnm_013490 Peptidase, M74 family K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D dnm_014990 Endopeptidase NLPC/P60 domain-containing protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D dnm_061420 Endopeptidase NLPC/P60 domain-containing protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D dnm_025340 Transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D dnm_034870 Lytic transglycosylase domain-containing protein, MltA-domain K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D dnm_018900 Lytic transglycosylase SLT domain-containing protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D dnm_010090 Lytic transglycosylase family protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D dnm_013540 LysM motif-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D dnm_046560 Lytic transglycosylase LysM domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D dnm_055690 LysM motif-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D dnm_094840 Putative endolytic murein transglycosylase, MltG-like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D dnm_036150 Peptidoglycan transglycosylase domain-containing protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D dnm_037440 Putative endolytic peptidoglycan transglycosylase, RlpA-like K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D dnm_082710 amiC; N-acetylmuramoyl-L-alanine amidase catalytic domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:dmm01004]
D dnm_032230 Putative 3-oxoacyl-[acyl-carrier-protein] synthase 3, FabH-like K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D dnm_060600 Putative 3-oxoacyl-[acyl-carrier-protein] synthase 3, FabH-like K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D dnm_063770 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D dnm_018320 Beta-ketoacyl-acyl synthase N-terminal domain-containing protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D dnm_091040 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D dnm_023000 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_055550 Beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_058990 Reductase domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_091060 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D dnm_002180 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D dnm_026500 acsA1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085720 acsA3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_085800 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D dnm_042780 prpE1; Propionate-CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D dnm_076770 prpE2; Propionate-CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D dnm_029230 acsA2; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D dnm_063620 AMP-binding enzyme K01896 ACSM; medium-chain acyl-CoA synthetase [EC:6.2.1.2]
D dnm_025880 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_078120 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D dnm_023080 AMP-dependent synthetase/ligase family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_061130 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_065910 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_072360 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_096520 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_037090 AMP binding domains-containing protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D dnm_067700 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D dnm_075010 plsY; Glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D dnm_012420 Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:dmm01008]
D dnm_041240 PfaD family protein K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
C 01006 Prenyltransferases [BR:dmm01006]
D dnm_089260 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D dnm_085090 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D dnm_050040 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D dnm_074520 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D dnm_050660 Prenyltransferase family protein, UbiA-like K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:dmm01007]
D dnm_079780 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D dnm_066420 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D dnm_092950 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D dnm_063480 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D dnm_071750 cysS1; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D dnm_077230 cysS2; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D dnm_058770 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D dnm_063120 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D dnm_046680 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D dnm_069500 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D dnm_052220 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D dnm_034320 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D dnm_000880 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D dnm_066060 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D dnm_073950 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D dnm_055140 glyQ; Glycyl-tRNA synthetase, subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D dnm_055130 glyS; Glycyl--tRNA synthetase, subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D dnm_061280 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D dnm_005180 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D dnm_062480 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D dnm_024550 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D dnm_076560 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D dnm_076550 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D dnm_031220 Aminotransferase family protein, class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D dnm_047440 aspC; Aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D dnm_053350 Aminotransferase, class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D dnm_010970 dapL; LL-diaminopimelate aminotransferase (LL-DAP-aminotransferase) K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D dnm_058670 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D dnm_058060 rocD; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D dnm_071100 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D dnm_042300 Aminotransferase family protein, class III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D dnm_001560 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D dnm_039390 Transferase domains-containing protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D dnm_046980 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D dnm_064100 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084410 ilvE; Branched-chain-amino-acid transaminase 1 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D dnm_084670 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D dnm_049770 DegT/DnrJ/EryC1/StrS aminotransferase domain-containing protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D dnm_097160 Aminotransferase family protein K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:dmm00194]
D dnm_085970 Rieske [2Fe-2S] domain-containing protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D dnm_093010 atpC; ATP synthase, subunit epsilon (ATP synthase F1 sector subunit epsilon) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D dnm_093020 atpD; ATP synthase, subunit beta (ATP synthase F1 sector subunit beta) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D dnm_093030 atpG; ATP synthase, subunit gamma (ATP synthase F1 sector subunit gamma) K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D dnm_093040 atpA; ATP synthase, subunit alpha (ATP synthase F1 sector subunit alpha) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D dnm_093050 atpH; ATP synthase, subunit delta (ATP synthase F1 sector subunit delta) K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D dnm_080690 atpF1; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_080700 atpF2; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_093060 atpF3; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_093070 atpF4; ATP synthase, subunit beta (ATP synthase F0 sector subunit b) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D dnm_000720 atpE1; ATP synthase, subunit gamma (ATP synthase F0 sector subunit c) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D dnm_080670 atpE2; ATP synthase, subunit gamma (ATP synthase F0 sector subunit c) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D dnm_080680 atpE3; ATP synthase, subunit gamma (ATP synthase F0 sector subunit c) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D dnm_000730 atpB1; ATP synthase, subunit alpha (ATP synthase F0 sector subunit a) K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D dnm_080660 atpB2; ATP synthase, subunit alpha (ATP synthase F0 sector subunit a) K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D dnm_000750 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter K02116 atpI; ATP synthase protein I
D dnm_080640 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter domain-containing protein K02116 atpI; ATP synthase protein I
D dnm_080650 ATP synthase domain-containing protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dmm03000]
D dnm_095130 Cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D dnm_086540 DNA-binding HTH domain-containing protein K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D dnm_100400 Putative DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D dnm_059130 Transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D dnm_015860 Transcriptional regulator, TetR-type K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D dnm_015900 Transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D dnm_092450 Transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D dnm_092470 Transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D dnm_093490 Uncharacterized protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D dnm_031400 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D dnm_073330 MarR-type HTH domain-containing protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D dnm_023640 fur; Ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D dnm_056350 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D dnm_095970 Transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D dnm_000340 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_014690 Transcriptional regulator, Crp-type K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_015340 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_015470 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_041990 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_045040 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_060940 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_061990 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_062000 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_065320 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_080750 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_084390 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_087860 Cyclic nucleotide-binding domain-containing protein, DUF4388 K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_092560 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_093940 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D dnm_037280 Transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D dnm_089900 Cyclic nucleotide-binding domain-containing protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D dnm_046630 Putative transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D dnm_044580 Iron dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D dnm_062600 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D dnm_076530 Helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D dnm_005940 HigA domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_043250 Uncharacterized protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_050930 HTH domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_085210 antotoxin domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_006000 Transcriptional regulator, sigma54-dependent K12146 hyfR; hydrogenase-4 transcriptional activator
D dnm_061290 Transcriptional regulator related to NifA, Fis family K02584 nifA; Nif-specific regulatory protein
D dnm_001480 Transcription regulator HTH motif-containing protein K02019 modE; molybdate transport system regulatory protein
D dnm_006470 HTH domain-containing protein, Cro/C1-type K07726 K07726; putative transcriptional regulator
D dnm_011590 HTH domain-containing protein, Cro/C1-type K07727 K07727; putative transcriptional regulator
D dnm_018830 Uncharacterized protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D dnm_059410 rocA; 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D dnm_008200 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D dnm_059310 ParB-like nuclease domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D dnm_078770 carD; Transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D dnm_061910 Amino acid-binding ACT domain-containing protein K03567 gcvR; glycine cleavage system transcriptional repressor
D dnm_083340 Putative sigma54-specific transcriptional activator of phage shock protein, PspF-like K03974 pspF; psp operon transcriptional activator
D dnm_087330 pspC; Phage shock protein C K03973 pspC; phage shock protein C
D dnm_037800 Phosphoribosyl transferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D dnm_097270 UPF0301 K07735 algH; putative transcriptional regulator
D dnm_017610 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D dnm_024220 nrdR; Transcriptional repressor K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:dmm03021]
D dnm_050580 Helicase family protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D dnm_042860 Uncharacterized protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7
D dnm_014060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D dnm_013700 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D dnm_013710 rpoC; DNA-directed RNA polymerase, subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D dnm_006230 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D dnm_010650 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D dnm_015570 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D dnm_025000 RNA polymerase sigma factor sigma-24 domain-containing K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D dnm_065290 rpoE; RNA polymerase sigma-E factor (sigma24) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D dnm_069210 RNA polymerase sigma factor sigma-70 domain-containing protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D dnm_098140 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D dnm_000170 rpoH1; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D dnm_082600 rpoH2; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D dnm_024750 rpoN; RNA polymerase sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D dnm_094880 nusA; Transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D dnm_028140 nusB; Transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D dnm_013650 nusG; Transcription termination/antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D dnm_034350 Histidine kinase domain-containing protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D dnm_040920 Histidine kinase superfamily protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D dnm_040910 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
D dnm_040900 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
D dnm_019360 PPM-type phosphatase domain-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_027090 Signal transduction response regulator, receiver domain phosphatase PPM-type K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_046880 Signal transduction response regulator, receiver domain phosphatase PPM-type K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_048310 Two component system response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_064220 PPM-type phosphatase domain-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_065500 Signal transduction response regulator, receiver domain phosphatase PPM-type K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_066310 Signal transduction response regulator, receiver domain phosphatase PPM-type K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_071410 PPM-type phosphatase domain-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_073580 PPM-type phosphatase and HAMP domains-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_074350 PPM-type phosphatase and HAMP domains-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_077020 Two component system response regulator receiver, PPM domain-containing K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_077150 HAMP and PPM-type domains-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_090110 HAMP and PPM-type phosphatase domains-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D dnm_067420 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D dnm_099380 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D dnm_065490 Histidine kinase and STAS domains-containing protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D dnm_071420 rsbW; Serine-protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D dnm_084870 Putative transcriptional regulator, ResC family K03803 rseC; sigma-E factor negative regulatory protein RseC
D dnm_017610 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D dnm_006220 greA; Transcription elongation factor K03624 greA; transcription elongation factor GreA
D dnm_050290 rho; Transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dmm03019]
D dnm_052310 Ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D dnm_044910 Ribonuclease E/G family protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D dnm_017640 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D dnm_012410 rnjA; Robonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D dnm_092960 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D dnm_066110 Uncharacterized protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D dnm_076420 cshA; DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D dnm_091670 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D dnm_094500 Putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D dnm_014920 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D dnm_094950 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D dnm_050290 rho; Transcription termination factor K03628 rho; transcription termination factor Rho
D dnm_076280 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnm_002330 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_007960 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_020320 Putative chaperone protein, DnaK-like K04043 dnaK; molecular chaperone DnaK
D dnm_025770 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045030 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045810 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_052840 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_066010 dnaK; Chaperone Hsp70 family K04043 dnaK; molecular chaperone DnaK
D dnm_068440 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068480 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068500 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_098010 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_088700 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnm_079450 Poly A polymerase head and HD domains-containing K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D dnm_024780 Nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D dnm_063890 ATP-dependent DNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D dnm_038190 Helicase domain-containing protein, DUF1605 and DUF3418 K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:dmm03011]
D dnm_051890 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D dnm_076230 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D dnm_050080 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D dnm_013830 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D dnm_014040 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D dnm_013950 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D dnm_028670 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D dnm_013730 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D dnm_013920 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D dnm_079580 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D dnm_013750 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D dnm_014020 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D dnm_013720 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D dnm_014010 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D dnm_013910 rpsZ; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D dnm_094940 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D dnm_033890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D dnm_013860 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D dnm_028660 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D dnm_013810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D dnm_052190 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D dnm_032730 Putative 30S ribosomal protein S21, RpsU-like K02970 RP-S21; small subunit ribosomal protein S21
D dnm_013670 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D dnm_013790 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D dnm_013760 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D dnm_013770 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D dnm_013900 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D dnm_013930 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D dnm_028640 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D dnm_077330 Uncharacterized protein K02939 RP-L9; large subunit ribosomal protein L9
D dnm_013680 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D dnm_013660 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D dnm_013690 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D dnm_022060 Uncharacterized protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D dnm_079590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D dnm_013870 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D dnm_013970 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D dnm_013840 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D dnm_014070 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D dnm_013940 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D dnm_033940 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D dnm_076570 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D dnm_076080 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D dnm_013820 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D dnm_013780 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D dnm_013880 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D dnm_076090 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D dnm_005210 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D dnm_013850 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D dnm_013960 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D dnm_050280 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D dnm_091080 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D dnm_013620 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D dnm_088280 50S ribosomal protein domain-containing protein K02914 RP-L34; large subunit ribosomal protein L34
D dnm_076580 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D dnm_078720 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D dnm_092935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D dnm_092920 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dmm03009]
D dnm_017640 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D dnm_030810 era; GTPase K03595 era; GTPase
D dnm_076100 obg; GTPase K03979 obgE; GTPase [EC:3.6.5.-]
D dnm_017610 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D dnm_094880 nusA; Transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D dnm_028140 nusB; Transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D dnm_013650 nusG; Transcription termination/antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D dnm_067910 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D dnm_096080 rsmB; putative ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D dnm_067480 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D dnm_069450 Ribosomal RNA small subunit methyltransferase E domain-containing protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D dnm_058590 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D dnm_000440 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D dnm_077250 rsmL; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D dnm_089220 hemolysin A/rRNA methyltransferase, TlyA-like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D dnm_075770 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D dnm_018920 rlmE; Ribosomal RNA large subunit methyltransferase E (23S rRNA methyltransferase) K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D dnm_033760 rlmN; Dual-specificity RNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D dnm_066130 Methyltransferase domain-containing protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D dnm_016560 Pseudouridine synthase, RluC/RluD-like K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D dnm_078780 Pseudouridine synthase, RluC/RluD family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D dnm_041770 RimK-like ATP-grasp domain-containing protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D dnm_082630 RimK-like ATP-grasp domain-containing protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D dnm_033910 rimM; Ribosome maturation factor K02860 rimM; 16S rRNA processing protein RimM
D dnm_085100 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D dnm_010360 YcaO-like domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D dnm_057180 YcaO-like domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D dnm_045460 Ribosomal protein methyltransferase domain-containing protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D dnm_050390 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D dnm_070970 Uncharacterized protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D dnm_052310 Ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D dnm_044910 Ribonuclease E/G family protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D dnm_076420 cshA; DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D dnm_032710 rsgA; Ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D dnm_036920 engA; GTP-binding protein K03977 engA; GTPase
D dnm_028590 hflX; GTPase K03665 hflX; GTPase
D dnm_062880 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D dnm_005200 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D dnm_094910 rbfA; Ribosome-binding factor K02834 rbfA; ribosome-binding factor A
D dnm_094870 rimP; Ribosomal maturation factor K09748 rimP; ribosome maturation factor RimP
D dnm_048400 rsfS; Ribosomal silencing factor K09710 ybeB; ribosome-associated protein
D dnm_072900 ybeY; Endoribonuclease K07042 ybeY; probable rRNA maturation factor
D dnm_024760 raiA; Ribosome hibernation promotion factor K05808 hpf; ribosome hibernation promoting factor
D dnm_059970 GTP binding domain-containing protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:dmm03016]
D dnm_083630 Ribonuclease K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D dnm_066110 Uncharacterized protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D dnm_047240 DHH and CBS domains-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D dnm_054190 Poly A polymerase head domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D dnm_045420 rtcB; tRNA-splicing ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D dnm_032100 Protein archease family protein K24956 ZBTB8OS; protein archease
D dnm_005180 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D dnm_046680 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D dnm_052220 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D dnm_063120 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D dnm_066420 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D dnm_058770 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D dnm_034320 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D dnm_024550 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D dnm_000880 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D dnm_062480 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D dnm_061280 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D dnm_071750 cysS1; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D dnm_077230 cysS2; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D dnm_069500 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D dnm_066060 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D dnm_073950 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D dnm_076560 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D dnm_076550 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D dnm_092950 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D dnm_063480 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D dnm_006280 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D dnm_012000 Histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D dnm_081750 Histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D dnm_014940 Methyltransferase, TsaA-like K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D dnm_034530 Methyltransferase domain-containing protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D dnm_063350 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D dnm_094930 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D dnm_062850 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D dnm_062880 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D dnm_074520 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D dnm_088350 mnmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D dnm_074650 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D dnm_010900 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D dnm_073660 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D dnm_088290 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D dnm_073820 Ribonuclease domain-containing protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D dnm_091780 Exonuclease domain-containing protein, HRDC domain-containing K03684 rnd; ribonuclease D [EC:3.1.13.5]
D dnm_024570 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D dnm_001570 Phosphotransferase domain-containing protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D dnm_079780 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D dnm_055140 glyQ; Glycyl-tRNA synthetase, subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D dnm_055130 glyS; Glycyl--tRNA synthetase, subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D dnm_010910 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D dnm_026400 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D dnm_077550 CMP/dCMP deaminase zinc-binding domain-containing protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D dnm_049750 dus1; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D dnm_052640 dus2; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D dnm_074890 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D dnm_083720 miaB1; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D dnm_092020 miaB2; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D dnm_069530 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D dnm_033920 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D dnm_053320 rRNA Methylase family protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D dnm_091990 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D dnm_006240 ttcA; tRNA 2-thiocytidine(32) synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D dnm_041490 Uncharacterized protein K13628 iscA; iron-sulfur cluster assembly protein
D dnm_047520 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D dnm_090800 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D dnm_006660 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D dnm_090790 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D dnm_062060 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH-dependent nitrile oxidoreductase) K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D dnm_021580 Epoxyqueuosine reductase family protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D dnm_047470 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D dnm_065980 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D dnm_006150 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D dnm_099790 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D dnm_054020 tRNA threonylcarbamoyl adenosine modification protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D dnm_094950 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D dnm_011040 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_020490 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_024100 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_024320 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_027830 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_081900 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:dmm03012]
D dnm_094890 Putative translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D dnm_076590 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D dnm_071960 putative ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D dnm_050070 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D dnm_013610 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D dnm_027550 fusA1; Elongation factor G K02355 fusA; elongation factor G
D dnm_048600 fusA2; Elongation factor G K02355 fusA; elongation factor G
D dnm_100800 fusA3; Elongation factor G K02355 fusA; elongation factor G
D dnm_020610 selB; Selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D dnm_050270 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D dnm_050050 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D dnm_050260 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D dnm_078730 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D dnm_013990 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D dnm_043520 efp; Elongation factor P K02356 efp; elongation factor P
D dnm_003650 epmA; Elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D dnm_036420 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D dnm_018090 putative peptide chain release factor 2 PrfB K02839 prfH; peptide chain release factor
D dnm_032030 Peptide chain release factor class I domain-containing protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:dmm03110]
D dnm_028050 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D dnm_089190 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D dnm_040500 clpX1; ATP-dependent Clp protease, ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D dnm_041120 clpX2; ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D dnm_071120 hslU; ATP-dependent hsl protease, ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D dnm_049240 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D dnm_002330 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_007960 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_020320 Putative chaperone protein, DnaK-like K04043 dnaK; molecular chaperone DnaK
D dnm_025770 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045030 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045810 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_052840 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_066010 dnaK; Chaperone Hsp70 family K04043 dnaK; molecular chaperone DnaK
D dnm_068440 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068480 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068500 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_098010 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_088700 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnm_006650 dnaJ1; Heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D dnm_062970 dnaJ2; Heat shock protein K05516 cbpA; curved DNA-binding protein
D dnm_020330 HSP70 cofactor GrpE domain-containing protein K03687 GRPE; molecular chaperone GrpE
D dnm_052800 HSP70 cofactor GrpE domain-containing protein K03687 GRPE; molecular chaperone GrpE
D dnm_066000 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D dnm_037480 Heat shock protein, Hsp 20 family K13993 HSP20; HSP20 family protein
D dnm_062160 Heat shock protein, Hsp 20 family K13993 HSP20; HSP20 family protein
D dnm_062170 Heat shock protein, Hsp 20 family K13993 HSP20; HSP20 family protein
D dnm_062180 Heat shock protein, Hsp 20 family K13993 HSP20; HSP20 family protein
D dnm_062190 Heat shock protein, Hsp 20 family K13993 HSP20; HSP20 family protein
D dnm_062200 Heat shock protein, Hsp 20 family K13993 HSP20; HSP20 family protein
D dnm_088690 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D dnm_020930 Trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_078690 degP; Periplasmic serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D dnm_065970 ftsH; ATP-dependent zinc metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D dnm_000730 atpB1; ATP synthase, subunit alpha (ATP synthase F0 sector subunit a) K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D dnm_080660 atpB2; ATP synthase, subunit alpha (ATP synthase F0 sector subunit a) K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D dnm_065270 Uncharacterized protein K06006 cpxP; periplasmic protein CpxP/Spy
D dnm_065280 Metal-binding domain-containing protein K06006 cpxP; periplasmic protein CpxP/Spy
D dnm_062390 Metal-binding domain-containing protein K07803 zraP; zinc resistance-associated protein
D dnm_059040 hypA; Hydrogenase maturation factor K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D dnm_066120 hypB; Hydrogenase maturation factor K04652 hypB; hydrogenase nickel incorporation protein HypB
D dnm_002940 Peptidase S8/S53 domain-containing protein K01342 aprE; subtilisin [EC:3.4.21.62]
D dnm_002930 Peptidase S8/S53 domain-containing protein K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D dnm_017330 Peptidase, C1A family K01363 CTSB; cathepsin B [EC:3.4.22.1]
D dnm_077980 Peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D dnm_072950 ppiA; Peptidyl-prolyl cis-trans isomerase A K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D dnm_059850 ppiD; Peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D dnm_019720 Peptidylprolyl isomerase family protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D dnm_040070 Chaperone SurA N-terminal domain-containing protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D dnm_005330 trxA1; Thioredoxin K03671 TXN; thioredoxin
D dnm_046580 Thioredoxin family protein K03671 TXN; thioredoxin
D dnm_065550 Thioredoxin family protein K03671 TXN; thioredoxin
D dnm_062440 trxA2; Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D dnm_019960 Uncharacterized protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D dnm_005760 Putative thiol:disulfide interchange protein, DsbD-like K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:dmm04131]
D dnm_069520 Ndk; Ndk: nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D dnm_024810 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_092270 gapB; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_064270 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D dnm_049240 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D dnm_048170 Autophagy domain-containing protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:dmm04121]
C 03051 Proteasome [BR:dmm03051]
D dnm_049240 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:dmm03032]
D dnm_054770 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D dnm_095130 Cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D dnm_007930 DNA-binding domain-containing protein K03530 hupB; DNA-binding protein HU-beta
D dnm_055060 hup; DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D dnm_040010 Histone-like DNA-binding family protein K04764 ihfA; integration host factor subunit alpha
D dnm_084230 DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D dnm_063420 Putative integration host factor subunit beta, IhfB-like K05788 ihfB; integration host factor subunit beta
D dnm_092400 dnaA; Chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D dnm_028630 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D dnm_028620 ATP binding protein IstB-like domain-containing protein K02315 dnaC; DNA replication protein DnaC
D dnm_010620 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D dnm_047990 ssb; single-stranded DNA-binding protein, helix-destabilizing K03111 ssb; single-strand DNA-binding protein
D dnm_065670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnm_006400 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnm_063220 DNA polymerase III N-terminal domain-containing protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnm_063410 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnm_020110 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnm_033950 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D dnm_080790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D dnm_055080 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_098170 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_010570 SAM-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D dnm_096390 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D dnm_005870 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D dnm_052390 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D dnm_012500 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dmm03036]
D dnm_061660 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_061670 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_072110 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_074790 Tetratricopeptide repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D dnm_038790 Methyltransferase domain-containing protein K00541 NNMT; nicotinamide N-methyltransferase [EC:2.1.1.1]
D dnm_095130 Cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D dnm_017640 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D dnm_007930 DNA-binding domain-containing protein K03530 hupB; DNA-binding protein HU-beta
D dnm_055060 hup; DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D dnm_040010 Histone-like DNA-binding family protein K04764 ihfA; integration host factor subunit alpha
D dnm_084230 DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D dnm_063420 Putative integration host factor subunit beta, IhfB-like K05788 ihfB; integration host factor subunit beta
D dnm_062970 dnaJ2; Heat shock protein K05516 cbpA; curved DNA-binding protein
D dnm_092400 dnaA; Chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D dnm_093490 Uncharacterized protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D dnm_056720 smc; Chromosome partition protein K03529 smc; chromosome segregation protein
D dnm_063490 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D dnm_063510 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D dnm_000660 ftsA; Cell division protein K03590 ftsA; cell division protein FtsA
D dnm_049780 Septum formation initiator domain-containing protein K05589 ftsB; cell division protein FtsB
D dnm_090300 Putve cell division ATP-binding protein, FtsE-like K09812 ftsE; cell division transport system ATP-binding protein
D dnm_000480 Putative Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D dnm_000450 Cell division protein FtsL domain-containing protein K03586 ftsL; cell division protein FtsL
D dnm_000650 Cell division protein FtsQ domain-containing protein K03589 ftsQ; cell division protein FtsQ
D dnm_000530 ftsW; putative peptidoglycan glycosyltransferase K03588 ftsW; cell division protein FtsW
D dnm_090290 Putative cell division protein, FtsX-like K09811 ftsX; cell division transport system permease protein
D dnm_000670 ftsZ; Cell division protein K03531 ftsZ; cell division protein FtsZ
D dnm_092970 Cell division protein ZapA domain-containing protein K09888 zapA; cell division protein ZapA
D dnm_092980 Uncharacterized protein K09892 zapB; cell division protein ZapB
D dnm_082710 amiC; N-acetylmuramoyl-L-alanine amidase catalytic domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D dnm_015850 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_038950 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_075270 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_097310 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_082220 minC; Septum site-determining protein K03610 minC; septum site-determining protein MinC
D dnm_082230 minD; Septum site-determining protein K03609 minD; septum site-determining protein MinD
D dnm_082240 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D dnm_010190 mreB1; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_010210 mreB2; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_087180 Cell shape-determining protein, MreB-like K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_093150 mreB3; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_093140 mreC; Cell shape-determining protein K03570 mreC; rod shape-determining protein MreC
D dnm_093100 mrdB; Peptidoglycan glycosyltransferase K05837 rodA; rod shape determining protein RodA
D dnm_015140 AAA ATPase-like domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_040670 AAA ATPase-like domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_042970 AAA ATPase-like domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_061330 AAA ATPase domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_072650 parA; Chromosome partitioning protein K03496 parA; chromosome partitioning protein
D dnm_008200 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D dnm_059310 ParB-like nuclease domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D dnm_074650 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D dnm_058590 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D dnm_048840 Integrase family protein K04763 xerD; integrase/recombinase XerD
D dnm_056930 Integrase family protein K04763 xerD; integrase/recombinase XerD
D dnm_053950 putative ATP-binding protein, ParA family K03593 mrp; ATP-binding protein involved in chromosome partitioning
D dnm_029970 engB; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:dmm03400]
D dnm_100390 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D dnm_031290 Adenine DNA glycosylase domain-containing protein, MutY-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D dnm_076700 Putative endonuclease III, Nth-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D dnm_050580 Helicase family protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D dnm_063290 NUDIX hydrolase domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D dnm_073840 Hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D dnm_099300 Hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D dnm_070860 Uracil DNA glycolyase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D dnm_100400 Putative DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D dnm_063730 DNA-3-methyladenine glycosylase 1, Tag-like K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D dnm_088570 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D dnm_098050 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D dnm_083670 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D dnm_055080 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_098170 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D dnm_080790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D dnm_070440 uvrA; UvrABC system, protein A K03701 uvrA; excinuclease ABC subunit A
D dnm_070360 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D dnm_076180 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D dnm_023670 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_027100 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_030730 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnm_013700 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D dnm_013710 rpoC; DNA-directed RNA polymerase, subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D dnm_014060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D dnm_006230 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D dnm_040050 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D dnm_082690 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D dnm_045820 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D dnm_079140 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D dnm_089290 xseA; Exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D dnm_089280 xseB; Exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D dnm_065670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnm_006400 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnm_063220 DNA polymerase III N-terminal domain-containing protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnm_063410 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnm_020110 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnm_047990 ssb; single-stranded DNA-binding protein, helix-destabilizing K03111 ssb; single-strand DNA-binding protein
D dnm_010570 SAM-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D dnm_030770 Very short patch repair endonucleases K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D dnm_018670 recB; Exodeoxyribonuclease V, subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D dnm_049980 recC; Exodeoxyribonuclease V, subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D dnm_018690 recD; Exodeoxyribonuclease V, subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D dnm_049990 ATP-dependent DNA helicase RecD domain-containing protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D dnm_024560 recA; Recombinase A K03553 recA; recombination protein RecA
D dnm_035640 ruvA; Holliday junction ATP-dependent DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D dnm_079370 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D dnm_035650 ruvC; Crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D dnm_010890 priA; Primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D dnm_018910 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D dnm_002100 Schlafen AAA domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_024440 Schlafen and ATP-dependent DNA helicase domains-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_054930 Schlafen and ATP-dependent DNA helicase domains-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_080400 ATP-dependent DNA helicase RecG C-terminal domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D dnm_060320 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D dnm_020130 recR; Recombination protein K06187 recR; recombination protein RecR
D dnm_082790 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D dnm_006380 Exonuclease family protein K03554 rdgC; recombination associated protein RdgC
D dnm_042540 cas1-1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_064790 cas1-2; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_081560 cas1-3; CRISPR-associated endonuclease K15342 cas1; CRISP-associated protein Cas1
D dnm_098400 cas1-4; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_098840 cas1-5; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_096390 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D dnm_005870 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D dnm_052390 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D dnm_007930 DNA-binding domain-containing protein K03530 hupB; DNA-binding protein HU-beta
D dnm_055060 hup; DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D dnm_040010 Histone-like DNA-binding family protein K04764 ihfA; integration host factor subunit alpha
D dnm_084230 DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D dnm_063420 Putative integration host factor subunit beta, IhfB-like K05788 ihfB; integration host factor subunit beta
D dnm_091670 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D dnm_094500 Putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D dnm_086080 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D dnm_041790 recX; Regulatory protein K03565 recX; regulatory protein
D dnm_091710 ATP-dependent helicase C-terminal domain-containing protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D dnm_094920 DHH domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:dmm03029]
D dnm_094890 Putative translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D dnm_076590 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D dnm_050070 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D dnm_013610 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D dnm_027550 fusA1; Elongation factor G K02355 fusA; elongation factor G
D dnm_048600 fusA2; Elongation factor G K02355 fusA; elongation factor G
D dnm_100800 fusA3; Elongation factor G K02355 fusA; elongation factor G
D dnm_030810 era; GTPase K03595 era; GTPase
D dnm_092950 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D dnm_052220 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D dnm_034320 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D dnm_058770 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D dnm_058800 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D dnm_066030 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D dnm_058790 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D dnm_093910 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D dnm_047990 ssb; single-stranded DNA-binding protein, helix-destabilizing K03111 ssb; single-strand DNA-binding protein
D dnm_079980 yaeT1; Outer membrane protein assembly complex protein K07277 SAM50; outer membrane protein insertion porin family
D dnm_083120 yaeT2; Outer membrane protein assembly complex protein K07277 SAM50; outer membrane protein insertion porin family
D dnm_002330 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_007960 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_020320 Putative chaperone protein, DnaK-like K04043 dnaK; molecular chaperone DnaK
D dnm_025770 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045030 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045810 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_052840 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_066010 dnaK; Chaperone Hsp70 family K04043 dnaK; molecular chaperone DnaK
D dnm_068440 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068480 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068500 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_098010 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_020330 HSP70 cofactor GrpE domain-containing protein K03687 GRPE; molecular chaperone GrpE
D dnm_052800 HSP70 cofactor GrpE domain-containing protein K03687 GRPE; molecular chaperone GrpE
D dnm_066000 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D dnm_088700 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnm_088690 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D dnm_006650 dnaJ1; Heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D dnm_062850 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D dnm_053950 putative ATP-binding protein, ParA family K03593 mrp; ATP-binding protein involved in chromosome partitioning
D dnm_088310 Putative membrane protein insertase, YidC-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D dnm_049240 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dmm02000]
D dnm_003510 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D dnm_097810 putative ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D dnm_029520 putative ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D dnm_029530 putative ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D dnm_059940 Cyclic nucleotdide binding and ABC transporter permease domains-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D dnm_020640 ABC transporter transmembrane and ATP-binding domains-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D dnm_032020 putative ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D dnm_071230 modA; Molybdate ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein
D dnm_071220 modB; Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D dnm_071180 AAA ATPase domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D dnm_020870 Molybdate/tungstate-binding protein, WtpA-like K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D dnm_020860 putative ABC transporter, permease protein MetI-like K15496 wtpB; molybdate/tungstate transport system permease protein
D dnm_020850 wtpC; Molybdate/tungstate import ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D dnm_002270 Periplasmic binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D dnm_094410 putative ABC transporter, permease protein MetI-like K05773 tupB; tungstate transport system permease protein
D dnm_099570 putative ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D dnm_063690 extracellular binding protein domain-containing protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D dnm_019300 Glycine betaine/proline betaine transport system, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D dnm_029830 Glycine betaine/proline betaine transport system, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D dnm_019320 Glycine betaine/proline betaine transport system, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D dnm_029840 Glycine betaine/proline betaine transport system, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D dnm_030090 Uncharacterized protein K02001 proW; glycine betaine/proline transport system permease protein
D dnm_019330 Glycine betaine/proline betaine transport system, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D dnm_029850 Glycine betaine/proline betaine transport system, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D dnm_029760 Glycine betaine/proline betaine transport system, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D dnm_029780 Glycine betaine/proline betaine transport system, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D dnm_033830 ABC transporter, substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D dnm_034090 NMT1/THI5 like domain-containing protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D dnm_052700 Uncharacterized protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D dnm_064340 Uncharacterized protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D dnm_052720 putative ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D dnm_064350 putative ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D dnm_073980 putative ABC transporter, permease protein, MetI-like K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D dnm_064330 putative ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D dnm_052710 putative ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D dnm_073600 Periplasmic binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D dnm_082950 ABC transporter, substrate-binding protein, PnrA-like K07335 bmpA; basic membrane protein A and related proteins
D dnm_083010 Branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D dnm_083020 Branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D dnm_082970 putative ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D dnm_063000 UPF0014 K02069 STAR2; UDP-glucose/iron transport system permease protein
D dnm_063010 putative ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D dnm_049700 mlaD; Intermembrane phospholipid transport system binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D dnm_053640 MlaD protein domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D dnm_049720 mlaE; Intermembrane phospholipid transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D dnm_061600 putative ABC transport system, permease protein, STAS domain-containing K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D dnm_049710 mlaF; Intermembrane phospholipid transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D dnm_053650 putative ABC transport system, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D dnm_053630 ABC-type transport auxiliary lipoprotein component domain-containing protein K18480 linN; cholesterol transport system auxiliary component
D dnm_049690 mlaC; Intermembrane phospholipid transport system binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D dnm_003860 Periplasmic binding domain-containing protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D dnm_011140 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_011190 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_013110 Periplasmic binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_030300 PBM domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_046260 PBM domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063920 pstS1; Phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063970 pstS2; Phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D dnm_063930 Phosphate transport system, permease protein, PstC-like K02037 pstC; phosphate transport system permease protein
D dnm_063990 pstC; Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D dnm_063940 Phosphate ABC transporter, permease protein PstA-like K02038 pstA; phosphate transport system permease protein
D dnm_064000 pstA; Phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D dnm_063950 Phosphate ABC transporter, ATP-binding protein PstB-like K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D dnm_064010 pstB; Phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D dnm_057600 phnD; Phosphonates-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D dnm_085670 Amino acid ABC transporter, substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D dnm_010250 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_011280 Amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_020970 Periplasmic binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_022760 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_037680 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_043340 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_061700 Amino acid ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_065900 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_070700 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_077130 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_077140 Leucine-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D dnm_010270 putative ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D dnm_011260 Amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D dnm_011250 Amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D dnm_083220 putative ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D dnm_011240 livG; High-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D dnm_083230 putative ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D dnm_011230 Amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D dnm_014500 Amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D dnm_034120 putative ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D dnm_069630 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_000800 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_003770 putative ABC-transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_006900 putative ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_006950 putative ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_010830 Solute-binding protein family 3 domain-containing protein, MltF-like K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_013530 putative ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_015030 Amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_015890 putative ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_021280 Solute-binding protein family 3 domain-containing protein, MltF-like K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_021340 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_025490 ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_032010 putative ABC transporter, periplasmatic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_037670 Solute-binding protein family 3 domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_048890 Uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_048910 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_049850 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_056870 Uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_058030 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_069650 Extracellular solute-binding protein N-terminal domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_072020 Solute-binding protein family 3 domain-containing protein, MltF-like K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_073020 putative ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_074000 putative ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_074020 putative ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_080610 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_081760 Solute-binding protein family 3 domain-containing protein, MltF-like K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_081770 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_083170 Extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_089550 putative ABC transporter, solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_091530 Uncharacterized protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_092760 Solute-binding protein family 3 domain-containing protein, MltF-like K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_100750 Solute-binding protein family 3 domain-containing protein, MltF-like K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D dnm_015010 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D dnm_015050 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D dnm_089420 glnQ; Glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D dnm_038390 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_099710 Leucine binding and solute-binding domains-containing protein K15580 oppA; oligopeptide transport system substrate-binding protein
D dnm_026570 Extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_037220 Extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_002690 putative ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_002840 putative ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D dnm_086140 Uncharacterized protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D dnm_086090 Uncharacterized protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D dnm_087520 putative ABC transporter, substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D dnm_013050 putative ABC transporter, permease protein MetI-like K13894 yejB; microcin C transport system permease protein
D dnm_087510 putative ABC transporter, permease protein MetI-like K13895 yejE; microcin C transport system permease protein
D dnm_087530 gsiA; Glutathione import ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D dnm_016910 putative ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D dnm_086780 putative ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D dnm_086770 putative ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D dnm_086760 putative ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D dnm_048020 putative ABC transporter, substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D dnm_019050 Vitamin B12 ABC transporter, substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D dnm_048040 putative ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D dnm_048030 putative ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D dnm_079910 Putative zinc ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D dnm_079930 Zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D dnm_079920 Zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D dnm_091960 Putative cobalt transport protein, CbiQ-like K02008 cbiQ; cobalt/nickel transport system permease protein
D dnm_028690 Metal transport protein domain-containing protein K02007 cbiM; cobalt/nickel transport system permease protein
D dnm_091950 putative ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D dnm_028700 DUF4198 K10094 cbiK; nickel transport protein
D dnm_028680 Uncharacterized protein K16915 cbiL; nickel transport protein
D dnm_086350 Uncharacterized protein K16915 cbiL; nickel transport protein
D dnm_035600 bioY; Biotin transporter K03523 bioY; biotin transport system substrate-specific component
D dnm_035530 ABC transporter, permease protein domain-containing protein K16783 bioN; biotin transport system permease protein
D dnm_035540 putative ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D dnm_004690 putative ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D dnm_004680 putative ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D dnm_066300 Permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D dnm_003490 lptG; ABC-type lipopolysaccharide export system, permease protein K11720 lptG; lipopolysaccharide export system permease protein
D dnm_024740 lptB; Lipopolysaccharide export system, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D dnm_003130 putative ABC transporter, permease protein K25151 gldF; gliding motility-associated transport system permease protein
D dnm_003140 putative ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D dnm_003120 putative ABC transporter domain-containing protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D dnm_083100 lolC; Lipoprotein-releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D dnm_083110 Putative lipoprotein-releasing system, ATP-binding protein, LolD-like K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D dnm_090290 Putative cell division protein, FtsX-like K09811 ftsX; cell division transport system permease protein
D dnm_090300 Putve cell division ATP-binding protein, FtsE-like K09812 ftsE; cell division transport system ATP-binding protein
D dnm_060930 putative ABC transport system ATP-binding domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D dnm_060910 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D dnm_016800 MacB-like periplasmic core domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D dnm_068690 Putative macrolide ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D dnm_074670 Permease, MacB-like domain-containing K02004 ABC.CD.P; putative ABC transport system permease protein
D dnm_016810 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D dnm_068680 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D dnm_010720 putative ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D dnm_014120 Sodium/sulfate symporter transmembrane domain-containing protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D dnm_022040 Citrate transporter-like domain-containing protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D dnm_022740 Divalent anion:Na+ symporter family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D dnm_051020 Sodium/sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D dnm_056130 Sodium/sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D dnm_032040 Multi antimicrobial extrusion protein, MatE family K26937 dinF; MATE family, multidrug efflux pump
D dnm_018750 Major facilitator superfamily domain-containing protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D dnm_046960 Major facilitator superfamily transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D dnm_086500 MFS domain-containing protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D dnm_001960 Major facilitator superfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D dnm_085930 Major facilitator superfamily transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D dnm_048170 Autophagy domain-containing protein K06902 UMF1; MFS transporter, UMF1 family
D dnm_054160 ptsP; Phosphoenolpyruvate-dependent phosphotransferase system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D dnm_073430 Putative phosphoenolpyruvate-protein phosphotransferase, PtsI-like K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D dnm_054150 ptsH; Phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D dnm_024800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_072850 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D dnm_002570 Phosphotransferase domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D dnm_024770 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D dnm_072770 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2-type domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D dnm_053720 Aquaporin family protein K06188 aqpZ; aquaporin Z
D dnm_029270 Potassium channel protein K10716 kch; voltage-gated potassium channel
D dnm_036890 Potassium channel domain-containing protein K10716 kch; voltage-gated potassium channel
D dnm_061260 Potassium channel protein K10716 kch; voltage-gated potassium channel
D dnm_061790 Ion channel domain-containing protein K10716 kch; voltage-gated potassium channel
D dnm_074700 amt; Ammonia channel K03320 amt; ammonium transporter, Amt family
D dnm_046110 von Willebrand factor A-like domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D dnm_054910 von Willebrand factor A-like domain-containing protein, tetratricopeptide repeat-containing K07114 yfbK; Ca-activated chloride channel homolog
D dnm_058500 von Willebrand factor A-like and SH3 domains-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D dnm_082770 von Willebrand factor A-like domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D dnm_032700 Uncharacterized protein K03282 mscL; large conductance mechanosensitive channel
D dnm_071850 Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D dnm_040080 mgtE1; Magnesium transporter K06213 mgtE; magnesium transporter
D dnm_097430 mgtE2; Magnesium transporter K06213 mgtE; magnesium transporter
D dnm_019000 MotA/TolQ/ExbB proton channel domain-containing protein K03561 exbB; biopolymer transport protein ExbB
D dnm_019010 MotA/TolQ/ExbB proton channel domain-containing protein K03561 exbB; biopolymer transport protein ExbB
D dnm_018990 Putative Biopolymer transporter, ExbD/TolR-like K03559 exbD; biopolymer transport protein ExbD
D dnm_035830 tolQ; Proton channel protein K03562 tolQ; biopolymer transport protein TolQ
D dnm_035810 Tol-Pal system protein domain-containing protein, TolR-like K03560 tolR; biopolymer transport protein TolR
D dnm_042120 crcB; Putative fluoride ion transporter K06199 crcB; fluoride exporter
D dnm_021400 CNNM and CBS domains-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D dnm_055770 Phosphate-selective porin domain-containing protein K07221 oprO_P; phosphate-selective porin OprO and OprP
D dnm_005380 OmpA-like domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D dnm_005400 OmpA-like and von Willebrand factor A-like domains-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D dnm_048960 OmpA-like domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D dnm_015610 Outer membrane protein transport protein domain-containing protein K06076 fadL; long-chain fatty acid transport protein
D dnm_069290 Outer membrane protein transport protein domain-containing protein K06076 fadL; long-chain fatty acid transport protein
D dnm_084200 Outer membrane protein transport protein domain-containing protein K06076 fadL; long-chain fatty acid transport protein
D dnm_062530 Polymorphic outer membrane protein repeat-containing protein K07279 yfaL; autotransporter family porin
D dnm_059780 TonB-dependent receptor domain-containing protein K19611 fepA; ferric enterobactin receptor
D dnm_019100 TonB-dependent receptor plug domain-containing protein K16092 btuB; vitamin B12 transporter
D dnm_026410 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D dnm_081140 Putative Vitamin B12 transporter, BtuB-like K16092 btuB; vitamin B12 transporter
D dnm_086730 TonB-dependent receptor-like superfamily protein K16092 btuB; vitamin B12 transporter
D dnm_009410 TonB-dependent receptor domain-containing protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D dnm_033130 TonB-dependent receptor domain-containing protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D dnm_033150 TonB-dependent receptor domain-containing protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D dnm_056780 TonB-dependent receptor domain-containing protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D dnm_019160 TonB-dependent receptor-like superfamily protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_020760 TonB-dependent receptor-like superfamily protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_036330 TonB-dependent receptor-like superfamily protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_057660 TonB-dependent receptor-like superfamily protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_081130 Putative Vitamin B12 transporter, BtuB-like K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_086160 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_086220 TonB-dependent receptor-like superfamily protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_086440 TonB-dependent receptor-like superfamily protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_015830 Efflux transporter, RND family K18903 oprC; outer membrane protein, multidrug efflux system
D dnm_088390 putative RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system
D dnm_053430 putative RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D dnm_016830 Efflux transporter, RND family K18904 nodT; outer membrane protein, multidrug efflux system
D dnm_015220 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D dnm_015480 Polysaccharide export protein domain-containing K01991 wza; polysaccharide biosynthesis/export protein
D dnm_060500 Putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D dnm_068080 Polysaccharide export protein domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D dnm_079980 yaeT1; Outer membrane protein assembly complex protein K07277 SAM50; outer membrane protein insertion porin family
D dnm_083120 yaeT2; Outer membrane protein assembly complex protein K07277 SAM50; outer membrane protein insertion porin family
D dnm_005310 Outer membrane protein assembly factor, BamD-like K05807 bamD; outer membrane protein assembly factor BamD
D dnm_018810 Translocation and assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D dnm_024710 Organic solvent tolerance-like N-temrinal domain-containing protein K09774 lptA; lipopolysaccharide export system protein LptA
D dnm_024700 lptC; Lipopolysaccharide export system protein K11719 lptC; lipopolysaccharide export system protein LptC
D dnm_063440 LPS-assembly protein, LptD-like K04744 lptD; LPS-assembly protein
D dnm_015210 Putative beta-barrel porin type 2 domain-containing protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D dnm_059350 Putative tzink transporter K07238 TC.ZIP; zinc transporter, ZIP family
D dnm_015840 Acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D dnm_005220 Small Multidrug Resistance protein domain-containing protein K03297 emrE; small multidrug resistance pump
D dnm_063650 Lactate permease K03303 lutP; lactate permease
D dnm_073550 Putative Na+/solute symporter K20989 DUR3; urea-proton symporter
D dnm_063600 Sodium/solute symporter domain-containing protein K14393 actP; cation/acetate symporter
D dnm_060380 njaA; Na(+)/H(+) antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D dnm_074800 Sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D dnm_026420 Putative glutathione-regulated potassium-efflux system protein, KefB-like K26735 KEA4_5_6; K+:H+ antiporter
D dnm_035490 trkH; Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D dnm_035500 trkA; Trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D dnm_072690 Chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D dnm_019690 Chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D dnm_056120 MFS superfamily protein K03321 TC.SULP; sulfate permease, SulP family
D dnm_067770 sulP; Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D dnm_083830 Putative sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D dnm_014640 C4-dicarboxylate TRAP transporter DctQ domain-containing protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D dnm_031450 TRAP transporter small membrane protein, DctQ-like K21394 yiaM; TRAP-type transport system small permease protein
D dnm_031460 TRAP transporter substrate-binding protein, DctP-like K21395 yiaO; TRAP-type transport system periplasmic protein
D dnm_070600 dctP2; C4-TRAP dicarboxylate transporter periplasmatic binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D dnm_067780 Bile acid:sodium symporter family protein K03325 ACR3; arsenite transporter
D dnm_072310 NADPH-dependent FMN reductase K03325 ACR3; arsenite transporter
D dnm_017370 Na+/H+ antiporter domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D dnm_017360 NADH-quinone oxidoreductase domain-containing protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D dnm_017340 NADH-quinone oxidoreductase domain-containing protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D dnm_092780 NADH-quinone oxidoreductase domain-containing protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D dnm_092840 NADH-quinone oxidoreductase domain-containing protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D dnm_022690 Na+/H+ ion antiporter subunit E domain-containing protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D dnm_022700 Na+/H+ ion antiporter subunit F domain-containing protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D dnm_022710 Na+/H+ ion antiporter subunit G domain-containing protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D dnm_049790 murJ; putative lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D dnm_052680 Membrane transport protein domain-containing protein K24180 mleP; malate permease and related proteins
D dnm_081070 Branched-chain amino acid transport permease protein domain-containing protein K26605 azlC; branched chain amino acid efflux pump
D dnm_081060 Branched-chain amino acid transport protein domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D dnm_074810 Transmembrane protein, TqsA-like K03548 perM; putative permease
D dnm_074510 Putative queosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D dnm_000530 ftsW; putative peptidoglycan glycosyltransferase K03588 ftsW; cell division protein FtsW
D dnm_031980 High-affinity nickel-transport protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D dnm_018980 TonB family C-terminal domain-containing protein K03832 tonB; periplasmic protein TonB
D dnm_027810 OmpA domain-containing outer membrane protein K03640 pal; peptidoglycan-associated lipoprotein
D dnm_035770 OmpA-like domain-containing protein K03640 pal; peptidoglycan-associated lipoprotein
D dnm_035800 TonB/TolA C-terminal domain-containing protein K03646 tolA; colicin import membrane protein
D dnm_035790 tolB; Tol-Pal system protein K03641 tolB; TolB protein
D dnm_078740 hppA; Membrane-bound proton-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D dnm_094120 oadB; Oxaloacetate decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D dnm_059090 pccB; Propionyl-CoA carboxylase, carboxyltransferase subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D dnm_079260 gcdA; Glutaconyl-CoA decarboxylase, subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D dnm_046570 Cytochrome c biogenesis protein transmembrane domain-containing protein K06196 ccdA; cytochrome c-type biogenesis protein
D dnm_034970 molybdopterin oxidoreductase family protein K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D dnm_003320 qrcC; Menaquinone reductase, iron-sulfur cluster-binding subunit K23301 qrcC; menaquinone reductase, iron-sulfur cluster-binding subunit [EC:1.97.-.-]
D dnm_003310 qrcB; Menaquinone reductase, molybdopterin-binding-like subunit K23302 qrcB; menaquinone reductase, molybdopterin-binding-like subunit
D dnm_003330 qrcD; Menaquinone reductase, integral membrane subunit K23303 qrcD; menaquinone reductase, integral membrane subunit
D dnm_059910 HylD family secretion domain-containing protein K11003 hlyD; membrane fusion protein, hemolysin D
D dnm_015850 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_038950 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_075270 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_097310 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_015230 Kinase domain-containing protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D dnm_015390 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D dnm_015400 Capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D dnm_060450 AAA ATPase-like domain-containing protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D dnm_060460 Polysaccharide chain length determinant protein domain-containing protein K25590 epsF; protein tyrosine kinase modulator
D dnm_015380 Polysaccharide chain length determinant protein domain-containing protein K25590 epsF; protein tyrosine kinase modulator
D dnm_030390 FeoA domain-containing protein K04758 feoA; ferrous iron transport protein A
D dnm_050320 Fe(2+) transport protein A domain-containing protein K04758 feoA; ferrous iron transport protein A
D dnm_030380 feoB1; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D dnm_050330 feoB2; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:dmm02044]
D dnm_059940 Cyclic nucleotdide binding and ABC transporter permease domains-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D dnm_059910 HylD family secretion domain-containing protein K11003 hlyD; membrane fusion protein, hemolysin D
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_000370 AAA ATPase domain-containing protein, peptidoglycan binding domain-containing K02450 gspA; general secretion pathway protein A
D dnm_027310 AAA ATPase-like domain-containing protein K02450 gspA; general secretion pathway protein A
D dnm_093310 Putative general secretion pathway protein C, GspC-like K02452 gspC; general secretion pathway protein C
D dnm_005020 gspD; General secrestion pathway protein D K02453 gspD; general secretion pathway protein D
D dnm_093330 Putative general secretion pathway protein D, GspD-like K02453 gspD; general secretion pathway protein D
D dnm_052530 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D dnm_093370 Putative general secretion pathway protein E, GspE-like K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D dnm_093190 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D dnm_007040 gspG; Type II secretion system protein G K02456 gspG; general secretion pathway protein G
D dnm_093200 Type II secretion system protein G domain-containing K02456 gspG; general secretion pathway protein G
D dnm_093210 Putative general secretion pathway protein G, GspG-like K02456 gspG; general secretion pathway protein G
D dnm_007030 Type II secretion system protein, GspH-like K02457 gspH; general secretion pathway protein H
D dnm_003380 Prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D dnm_093240 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02458 gspI; general secretion pathway protein I
D dnm_093250 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02459 gspJ; general secretion pathway protein J
D dnm_005080 Type II secretion system protein, protein K K02460 gspK; general secretion pathway protein K
D dnm_093260 Type II secretion system protein G domain-containing K02460 gspK; general secretion pathway protein K
D dnm_093270 Pilus assembly protein domain-containing protein K02461 gspL; general secretion pathway protein L
D dnm_005060 Type II secretion system protein, protein M K02462 gspM; general secretion pathway protein M
D dnm_093280 Type II secretion system protein M domain-containing protein K02462 gspM; general secretion pathway protein M
D dnm_006120 pilD; Type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D dnm_084710 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D dnm_027300 Putative general secretion pathway II protein, GspE-like K02652 pilB; type IV pilus assembly protein PilB
D dnm_083070 pilC; Type 4 fimbrial assembly protein K02653 pilC; type IV pilus assembly protein PilC
D dnm_028380 Two component system response regulator, DUF4388 K02657 pilG; twitching motility two-component system response regulator PilG
D dnm_028220 Signal transduction response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_028340 Two component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_028210 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K02660 pilJ; twitching motility protein PilJ
D dnm_046450 Type IV pilus assembly protein PilM domain-containing protein K02662 pilM; type IV pilus assembly protein PilM
D dnm_046440 Fimbrial assembly protein PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D dnm_046430 Putative pilus assembly protein PilO domain-containing protein K02664 pilO; type IV pilus assembly protein PilO
D dnm_028790 pilQ; Type IV pilus biogenesis and competence protein K02666 pilQ; type IV pilus assembly protein PilQ
D dnm_046390 Putative fimbrial assembly protein, PilQ-like K02666 pilQ; type IV pilus assembly protein PilQ
D dnm_086920 pilT1; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D dnm_086960 pilT2; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D dnm_088790 Type IV pilus modification protein K02671 pilV; type IV pilus assembly protein PilV
D dnm_088770 PilX N-terminal domain-containing protein K02673 pilX; type IV pilus assembly protein PilX
D dnm_088810 Prepilin-type cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D dnm_027630 Prepilin endopeotidase domain-containing protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D dnm_027710 Pilus formation protein domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D dnm_027620 Putative Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D dnm_027280 Putative general secretion pathway protein, GspF-like K12278 mshG; MSHA biogenesis protein MshG
D dnm_086910 YGGT domain-containing protein K02221 yggT; YggT family protein
D dnm_001190 Uncharacterized protein K07325 flaB; archaeal flagellin FlaB
D dnm_039620 Helix-hairpin-helix motif-containing protein K02237 comEA; competence protein ComEA
D dnm_052490 Helix-hairpin-helix motif-containing protein K02237 comEA; competence protein ComEA
D dnm_007350 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D dnm_022280 DNA internalization-related competence protein, ComEC/Rec2-like K02238 comEC; competence protein ComEC
D dnm_062530 Polymorphic outer membrane protein repeat-containing protein K07279 yfaL; autotransporter family porin
D dnm_017850 Type VI secretion system protein domain-containing protein, IcmF-like K11891 impL; type VI secretion system protein ImpL
D dnm_017830 Type VI secretion system protein, DotU-like K11892 impK; type VI secretion system protein ImpK
D dnm_017820 Type IV secretion system protein, VasE-like K11893 impJ; type VI secretion system protein ImpJ
D dnm_018180 Type VI secretion protein domain-containing protein, TssG-like K11895 impH; type VI secretion system protein ImpH
D dnm_018170 Type VI secretion protein domain-containing protein, TssF-like K11896 impG; type VI secretion system protein ImpG
D dnm_018160 Type VI secretion protein domain-containing protein, lysozyme-like K11897 impF; type VI secretion system protein ImpF
D dnm_018120 Type VI secretion protein domain-containing protein K11900 impC; type VI secretion system protein ImpC
D dnm_018110 Type VI secretion protein domain-containing protein K11901 impB; type VI secretion system protein ImpB
D dnm_017900 Type VI secretion system protein domain-containing protein, ImpA-like K11902 impA; type VI secretion system protein ImpA
D dnm_018140 Type VI secretion protein domain-containing protein, Hcp-like K11903 hcp; type VI secretion system secreted protein Hcp
D dnm_018290 Type VI secretion protein domain-containing protein, RhsGE-like K11904 vgrG; type VI secretion system secreted protein VgrG
D dnm_018280 Chaperone protein ClpB K11907 vasG; type VI secretion system protein VasG
D dnm_017780 Uncharacterized protein K11918 lip3; type VI secretion system protein
D dnm_043260 Uncharacterized protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D dnm_028030 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D dnm_052360 secD; Protein translocase subunit D K03072 secD; preprotein translocase subunit SecD
D dnm_013640 Protein translocase subunit, SecE-like K03073 secE; preprotein translocase subunit SecE
D dnm_052370 secF; Protein translocase subunit F K03074 secF; preprotein translocase subunit SecF
D dnm_030910 Protein-export membrane protein family protein, secG K03075 secG; preprotein translocase subunit SecG
D dnm_013980 secY; Protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D dnm_033880 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D dnm_023730 ftsY; Signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D dnm_052350 yajC; Sec translocon accessory complex subunit K03210 yajC; preprotein translocase subunit YajC
D dnm_088310 Putative membrane protein insertase, YidC-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D dnm_065410 Sec-independent protein translocase protein domain-containing protein K03116 tatA; sec-independent protein translocase protein TatA
D dnm_034840 Protein transocase domain-containing protein K03117 tatB; sec-independent protein translocase protein TatB
D dnm_034830 tatC; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dmm02042]
D dnm_021400 CNNM and CBS domains-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:dmm02022]
D dnm_020820 Two component system histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D dnm_064070 Putative alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D dnm_020800 Two component system response regulator, DNA-binding domain-containing K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D dnm_064030 Two component system response regulator, DNA-binding domain-containing K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D dnm_016460 Two component system histidine kinase, HAMP domain-containing K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D dnm_016470 Two component system response regulator, BaeR-like K07664 baeR; two-component system, OmpR family, response regulator BaeR
D dnm_083580 Two component system response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D dnm_042910 Histidine kinase domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D dnm_022800 Two component system response regulator, LuxR domains-containing K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D dnm_063850 Two component system response regulator, LuxR domain-containing K07696 nreC; two-component system, NarL family, response regulator NreC
D dnm_065830 Two component system response regulator, LuxR domain-containing K07696 nreC; two-component system, NarL family, response regulator NreC
D dnm_095620 Two component system histidine kinase, PAS domain-containing K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D dnm_026620 Two component system response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D dnm_077380 Two component system histidine kinase, HAMP and PAS domain-containing K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D dnm_067470 Two component system response regulator, sigma factor 54 interaction domain-containing K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D dnm_058430 Two component system histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D dnm_002760 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_017010 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_026940 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_027260 Sigma-54 interaction domain-containing protein K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_063800 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_071840 Two component system response regulator, sigma54-specific K07714 atoC; two-component system, NtrC family, response regulator AtoC
D dnm_079500 Two component system response regulator, sigma54-specific K02667 pilR; two-component system, NtrC family, response regulator PilR
D dnm_000990 Two component system response regulator/histidine kinase, PAS domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_017000 Two component system histidine kinase, PAS domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_019910 Two component system histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_050410 Two component system response regulator/histidine kinase, PAS domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_051010 Two component system response regulator/histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_056170 Two component system histidine kinase, double Cache domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_063790 Two component system histidine kinase, HAMP domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_065880 Histidine kinase, double Cache and PAS domains-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_083560 Two component system histidine kinase, double Cache domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_083810 Two component system histidine kinase, double Cache domain-containing K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D dnm_046500 Two component system response regulator, sigma54-specific K02481 flgR; two-component system, NtrC family, response regulator
D dnm_065870 zraR; Two component system response regulator, sigma54-specific K02481 flgR; two-component system, NtrC family, response regulator
D dnm_070510 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D dnm_012740 Two component system histidine kinase, CheA and CheW domains-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_040750 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_041060 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_043950 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_044630 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_046900 Two component system histidine kinase, Hpt domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_053810 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_056970 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_063710 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_065480 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_087070 Two component system histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_029370 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_032690 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040780 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040970 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041010 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041040 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041050 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_043960 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_061320 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_084530 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_085900 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_087050 Chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_012650 cheB1; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_040720 cheB3; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_044700 cheB4; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052730 cheB5; Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052750 Two component system response regulator/histidine kinase, CheB domain-containing K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_065440 cheB6; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_067240 cheB7; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_056010 Protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D dnm_028280 Two component system response regulator/histidine kinase, CheW domain-containing K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D dnm_028380 Two component system response regulator, DUF4388 K02657 pilG; twitching motility two-component system response regulator PilG
D dnm_028220 Signal transduction response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_028340 Two component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_034060 Histidine kinase, CheW domain-containing K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D dnm_034150 cheB2; Protein-glutamate methylesterase/protein-glutamine glutaminase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D dnm_041180 Two component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D dnm_074340 rrf; Response regulator protein K11443 divK; two-component system, cell cycle response regulator DivK
D dnm_092180 Two component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D dnm_006930 Two component system response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D dnm_009670 Two component system response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D dnm_006030 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_006050 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_011550 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_020720 Two component system histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_021030 Two component system response regulator/histidine kinase, PAS and GAF domains-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_033050 Two component system response regulator/histidine kinase, HAMP domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_037210 Two component system response regulator/histidine kinase, PAS and HAMP domains-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_041210 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_046000 Two component system response regulator/histidine kinase, CHASE2 domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_047350 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_055330 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_061360 Two component system response regulator/histidine kinase, PAS domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_064180 Two component system response regulator/histidine kinase, PAS domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_080820 Two component system response regulator/histidine kinase, HAMP domain-containing K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_085890 Two component sstem response regulator/histidine kinase, EAL domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_093790 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D dnm_096180 Two component system response regulator/histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:dmm02035]
D dnm_012740 Two component system histidine kinase, CheA and CheW domains-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_040750 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_041060 Two component system histidine kinase, Hpt-family K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_043950 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_044630 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_046900 Two component system histidine kinase, Hpt domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_053810 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_056970 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_063710 Two component system histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_065480 Two component system response regulator/histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_087070 Two component system histidine kinase, CheW domain-containing K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D dnm_028330 CheW-like domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_033000 cheW1; Chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_040710 cheW4; Chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_043690 cheW5; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_044640 cheW6; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_046910 CheW-like domain containing-protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_047100 cheW7; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_065470 Chemotaxis protein, CheW/CheV-like K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_067140 cheW8; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_072100 CheW domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_087040 cheW9; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D dnm_040990 STAS domain-containing protein K03409 cheX; chemotaxis protein CheX
D dnm_029380 CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040790 Chemotaxis protein CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040810 Chemotaxis protein CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_040840 CheC domain-containing protein K03410 cheC; chemotaxis protein CheC
D dnm_012630 Putative chemoreceptor glutamine deamidase, CheD-like K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_012680 cheD1; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_012710 cheD2; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_047090 Putative chemoreceptor glutamine deamidase, CheD-like K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_064410 Putative chemoreceptor glutamine deamidase, CheD-like K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D dnm_012720 Chemotaxis protein methyltransferase, CheR-like K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_012730 Chemotaxis protein methyltransferase, CheR-like K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_032570 SAM-dependent methyltransferase domain-containing protein, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_040890 cheR1; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_044710 cheR2; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_065430 cheR3; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_067250 cheR4; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D dnm_012650 cheB1; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_040720 cheB3; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_044700 cheB4; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052730 cheB5; Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_052750 Two component system response regulator/histidine kinase, CheB domain-containing K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_065440 cheB6; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_067240 cheB7; Protein-glutamate methylesterase/protein-glutamine glutaminase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D dnm_056010 Protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D dnm_029370 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_032690 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040780 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_040970 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041010 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041040 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_041050 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_043960 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_061320 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_084530 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_085900 Two component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_087050 Chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D dnm_000810 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_003030 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_003400 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_011120 Methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_011180 Methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_012700 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_013080 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_016900 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_022500 Methyl-accepting chemotaxis protein, double Cache and HAMP domains-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_024060 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_026350 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_027050 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_027350 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_029280 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_029510 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_032390 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_032780 PAS and HAMP domains-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_034100 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_034130 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_036860 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_037650 Methyl-accepting chemotaxis protein domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_037700 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_040700 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_041070 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043320 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043700 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043710 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043730 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043900 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043920 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_043940 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_044670 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_044690 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_045090 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046200 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046300 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_046920 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_047110 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_051220 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_052250 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_054880 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_056030 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_056810 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_057590 Methyl-accepting chemotaxis protein signailing-domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_061540 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_063560 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_063680 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_065450 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_068170 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_069770 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_070330 Methyl-accepting chemotaxis protein domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_070420 Methyl-accepting chemotaxis protein signailing domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_074860 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_074880 Methyl-accepting chemotaxis protein, HlyB domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_076730 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_079310 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_079440 Methyl-accepting chemotaxis protein signailling domain-containing protein, HAMP domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_081710 Methyl-accepting chemotaxis protein signailling domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_082840 Methyl-accepting chemotaxis protein signailing domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_084360 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_087020 Methyl-accepting chemotaxis protein signailingdomain-containing protein, HAMP and double Cache domains-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_089560 Methyl-accepting chemotaxis protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_091700 Methyl-accepting chemotaxis protein domain-containing protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_095080 Methyl-accepting chemotaxis protein domain-containing protein, single Cache and HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_099400 Methyl-accepting chemotaxis protein signailling domain-containing protein, single cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D dnm_100190 Methyl-accepting chemotaxis protein, double Cache domain-containing K03406 mcp; methyl-accepting chemotaxis protein
D dnm_052740 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein K04562 flhG; flagellar biosynthesis protein FlhG
D dnm_001190 Uncharacterized protein K07325 flaB; archaeal flagellin FlaB
D dnm_028380 Two component system response regulator, DUF4388 K02657 pilG; twitching motility two-component system response regulator PilG
D dnm_028220 Signal transduction response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_028340 Two component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D dnm_028210 Methyl-accepting chemotaxis protein signailing-domain containing protein, HAMP domain-containing K02660 pilJ; twitching motility protein PilJ
D dnm_028280 Two component system response regulator/histidine kinase, CheW domain-containing K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D dnm_079500 Two component system response regulator, sigma54-specific K02667 pilR; two-component system, NtrC family, response regulator PilR
D dnm_086920 pilT1; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D dnm_086960 pilT2; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D dnm_084710 Prepilin-type cleavage/methylation N-terminal domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D dnm_027300 Putative general secretion pathway II protein, GspE-like K02652 pilB; type IV pilus assembly protein PilB
D dnm_083070 pilC; Type 4 fimbrial assembly protein K02653 pilC; type IV pilus assembly protein PilC
D dnm_006120 pilD; Type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D dnm_028790 pilQ; Type IV pilus biogenesis and competence protein K02666 pilQ; type IV pilus assembly protein PilQ
D dnm_046390 Putative fimbrial assembly protein, PilQ-like K02666 pilQ; type IV pilus assembly protein PilQ
D dnm_046430 Putative pilus assembly protein PilO domain-containing protein K02664 pilO; type IV pilus assembly protein PilO
D dnm_046440 Fimbrial assembly protein PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D dnm_046450 Type IV pilus assembly protein PilM domain-containing protein K02662 pilM; type IV pilus assembly protein PilM
D dnm_088790 Type IV pilus modification protein K02671 pilV; type IV pilus assembly protein PilV
D dnm_088770 PilX N-terminal domain-containing protein K02673 pilX; type IV pilus assembly protein PilX
D dnm_027620 Putative Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D dnm_027630 Prepilin endopeotidase domain-containing protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D dnm_027710 Pilus formation protein domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D dnm_043260 Uncharacterized protein K07345 fimA; major type 1 subunit fimbrin (pilin)
C 03037 Cilium and associated proteins [BR:dmm03037]
D dnm_055730 Leucine rich EPTP repeat-containing protein K24437 TSEAR; thrombospondin-type laminin G domain and EAR repeat-containing protein
C 04812 Cytoskeleton proteins [BR:dmm04812]
D dnm_049490 amrB; AmmeMemoSam_B K06990 MEMO1; MEMO1 family protein
D dnm_054060 amrB2; AmmeMemoSam_B K06990 MEMO1; MEMO1 family protein
D dnm_010190 mreB1; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_010210 mreB2; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_087180 Cell shape-determining protein, MreB-like K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_093150 mreB3; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_000670 ftsZ; Cell division protein K03531 ftsZ; cell division protein FtsZ
D dnm_000660 ftsA; Cell division protein K03590 ftsA; cell division protein FtsA
D dnm_082220 minC; Septum site-determining protein K03610 minC; septum site-determining protein MinC
D dnm_082230 minD; Septum site-determining protein K03609 minD; septum site-determining protein MinD
D dnm_082240 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D dnm_015140 AAA ATPase-like domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_040670 AAA ATPase-like domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_042970 AAA ATPase-like domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_061330 AAA ATPase domain-containing protein K03496 parA; chromosome partitioning protein
D dnm_072650 parA; Chromosome partitioning protein K03496 parA; chromosome partitioning protein
D dnm_008200 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D dnm_059310 ParB-like nuclease domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dmm04147]
D dnm_049240 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D dnm_014920 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D dnm_024810 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_092270 gapB; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dnm_003590 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D dnm_064270 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D dnm_077980 Peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D dnm_088700 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnm_002330 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_007960 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_020320 Putative chaperone protein, DnaK-like K04043 dnaK; molecular chaperone DnaK
D dnm_025770 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045030 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_045810 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_052840 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_066010 dnaK; Chaperone Hsp70 family K04043 dnaK; molecular chaperone DnaK
D dnm_068440 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068480 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_068500 Chaperone protein DnaK-like domain-containing protein K04043 dnaK; molecular chaperone DnaK
D dnm_098010 Chaperone Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D dnm_052480 pgi; Glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D dnm_076200 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D dnm_013610 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D dnm_012000 Histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D dnm_081750 Histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D dnm_017330 Peptidase, C1A family K01363 CTSB; cathepsin B [EC:3.4.22.1]
D dnm_023080 AMP-dependent synthetase/ligase family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_061130 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_065910 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_072360 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_096520 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D dnm_019900 thlA1; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_036520 thlA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_054760 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_055560 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_072130 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D dnm_041950 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D dnm_032760 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D dnm_046140 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D dnm_077310 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D dnm_012590 glgB; 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D dnm_070620 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_074730 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D dnm_029820 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D dnm_074850 fhs; Formate-tetrahydrofolate ligase K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3]
D dnm_040360 Phosphoglycerate dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_048250 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_078580 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D dnm_008570 MGS domain-containing protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D dnm_008580 Bifunctional purine biosynthesis protein dimain-containing protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D dnm_014850 Peptidase, M48 family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D dnm_035360 lpdA; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_064090 ipdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D dnm_006980 Electron transfer flavoprotein K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_029020 Electron transfer flavoprotein subunit alpha family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_051850 etfA1; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_061170 etfA2; Electron transfer flavoprotein, subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_066510 etfA3; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_070100 BamP; Electron transfer flavoprotein, subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_089850 etfA4; Electron transfer flavoprotein, subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D dnm_023020 tpiA1; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D dnm_030900 tpiA2; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:dmm02048]
D dnm_042540 cas1-1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_064790 cas1-2; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_081560 cas1-3; CRISPR-associated endonuclease K15342 cas1; CRISP-associated protein Cas1
D dnm_098400 cas1-4; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_098840 cas1-5; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D dnm_042550 cas2-1; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D dnm_064800 cas2-2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D dnm_064810 cas2-3; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D dnm_098390 cas2-4; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D dnm_098830 cas2-5; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D dnm_042500 DEAD/DEAH box helicase domain-containing protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D dnm_098430 CRISPR-associated helicase, Cas3-like K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D dnm_098910 CRISPR-associated helicase, Cas3-like K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D dnm_098960 CRISPR-associated helicase, Cas3-like K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D dnm_098470 cas8a1; CRISPR-associated protein Cas8b1/Cst1, subtype I-B/TNEAP K19088 cst1; CRISPR-associated protein Cst1
D dnm_098450 cas7i; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP K19075 cst2; CRISPR-associated protein Cst2
D dnm_042510 DUF83 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D dnm_098410 cas4-1; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D dnm_098850 cas4-2; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D dnm_098440 cas5b; CRISPR-associated protein Cas5, subtype I-B/TNEAP K19090 cas5t; CRISPR-associated protein Cas5t
D dnm_042460 CRISPR-associated protein, Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D dnm_098890 cas8c-1; CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1
D dnm_098940 cas8c-2; CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1
D dnm_098880 cas7c-1; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG K19118 csd2; CRISPR-associated protein Csd2
D dnm_098930 cas7c-2; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG K19118 csd2; CRISPR-associated protein Csd2
D dnm_098900 cas5c-1; CRISPR-associated protein Cas5, subtype I-C/DVULG K19119 cas5d; CRISPR-associated protein Cas5d
D dnm_098950 cas5c-2; CRISPR-associated protein Cas5, subtype I-C/DVULG K19119 cas5d; CRISPR-associated protein Cas5d
D dnm_042480 CRISPR-associated protein, Csc2 K19121 csc2; CRISPR-associated protein Csc2
D dnm_081310 csx10; CRISPR-associated RAMP protein, Csx10 family K19134 csx10; CRISPR-associated protein Csx10
D dnm_080480 cas10-1; CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE K07016 csm1; CRISPR-associated protein Csm1
D dnm_081460 cas10-2; CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE K07016 csm1; CRISPR-associated protein Csm1
D dnm_080470 csm2-1; CRISPR type III-A/MTUBE-associated protein K19138 csm2; CRISPR-associated protein Csm2
D dnm_081450 csm2-2; CRISPR type III-A/MTUBE-associated protein K19138 csm2; CRISPR-associated protein Csm2
D dnm_080460 csm3-1; CRISPR type III-A/MTUBE-associated RAMP protein K09002 csm3; CRISPR-associated protein Csm3
D dnm_081440 csm3-2; CRISPR type III-A/MTUBE-associated RAMP protein K09002 csm3; CRISPR-associated protein Csm3
D dnm_080450 csm4-1; CRISPR type III-A/MTUBE-associated RAMP protein K19139 csm4; CRISPR-associated protein Csm4
D dnm_081430 csm4-2; CRISPR type III-A/MTUBE-associated RAMP protein K19139 csm4; CRISPR-associated protein Csm4
D dnm_080440 csm5-1; CRISPR type III-A/MTUBE-associated RAMP protein K19140 csm5; CRISPR-associated protein Csm5
D dnm_002040 Site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D dnm_008480 Putative type I restriction enzyme EcoR124II R protein, HsdR-like K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D dnm_031610 Putative Type III endonuclease, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D dnm_079060 Endonuclease domain-containing protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D dnm_002090 Restriction modification system methylase, HsdS family K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D dnm_008510 Putative type-1 restriction enzyme EcoKI, HsdS-like K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D dnm_025050 Restriction endonuclease, type I K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D dnm_031630 Restriction endonuclease, type I K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D dnm_079120 Restriction modification system methylase, HsdS family K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D dnm_002110 SAM-dependent DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D dnm_006190 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D dnm_025060 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D dnm_031620 SAM-dependent DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D dnm_079130 SAM-dependent DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D dnm_010570 SAM-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D dnm_031250 SAM-dependent methyltransferase domain-containing protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_035070 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_035090 Uncharacterized protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_086950 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_097880 Putative restriction-modification methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_005920 SAM-dependent methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_072710 SAM-dependent DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_077620 SAM-dependent methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_035560 SAM-dependent DNA methylase domain-containing protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D dnm_067670 SAM-dependent DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D dnm_082580 SAM-dependent DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D dnm_085080 SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D dnm_095130 Cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D dnm_008170 SAM-dependent DNA methylase K24451 zim; modification methylase
D dnm_082490 SAM-dependent DNA methylase K24451 zim; modification methylase
D dnm_085990 SAM-dependent methyltransferase K24451 zim; modification methylase
D dnm_015760 Restriction endonuclease family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D dnm_062320 Restriction endonuclease family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D dnm_015750 SAM-dependent methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_062340 SAM-dependent DNA methylase domain-containing protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D dnm_056300 HNH endonuclease domain-containing protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D dnm_008850 Restriction endonuclease domain-containing protein K07448 mrr; restriction system protein
D dnm_047480 Restriction endonuclease K07448 mrr; restriction system protein
D dnm_004420 Toxin-antitoxin system, toxin component, mRNA interferase PemK/MazF-like K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_018840 Toxin-antitoxin system, toxin component, mRNA interferase PemK/MazF-like K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_020420 Toxin-antitoxin system, toxin component, mRNA interferase PemK/MazF-like K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_026070 Putative endoribonuclease MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_044400 Toxin-antitoxin system, toxin component, mRNA interferase PemK/MazF-like K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_050155 Toxin-antitoxin system, toxin component, mRNA interferase PemK/MazF-like K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_089380 Putative endoribonuclease toxin, mazF-like K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D dnm_026080 Antidote-toxin recognition MazE domain-containing protein K07172 mazE; antitoxin MazE
D dnm_089370 Antidote-toxin recognition MazE domain-containing protein K07172 mazE; antitoxin MazE
D dnm_018830 Uncharacterized protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D dnm_035050 Toxin-antitoxin system, toxin component, RelE/ParE-like K06218 relE; mRNA interferase RelE/StbE
D dnm_043090 Toxin-antitoxin system, toxin component, RelE/ParE-like K06218 relE; mRNA interferase RelE/StbE
D dnm_066960 Toxin-antitoxin system, toxin component domain-containing protein, RelE/ParE-like K06218 relE; mRNA interferase RelE/StbE
D dnm_091750 Uncharacterized protein K06218 relE; mRNA interferase RelE/StbE
D dnm_097520 toxin-antitoxin domain-containing protein K06218 relE; mRNA interferase RelE/StbE
D dnm_004720 Toxin-antitoxin system, toxin component, RelE/ParE-like K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D dnm_019770 Toxin-antitoxin system, toxin component, RelE/ParE-like K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D dnm_039520 Addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D dnm_050190 Toxin-antitoxin system, toxin component, RelE/ParE-like K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D dnm_004730 Toxin-antitoxin system, antitoxin component K19159 yefM; antitoxin YefM
D dnm_019760 Uncharacterized protein K19159 yefM; antitoxin YefM
D dnm_039510 Toxin-antitoxin system, antitoxin component, PHD family K19159 yefM; antitoxin YefM
D dnm_043270 Toxin-antitoxin system, antitoxin component K19159 yefM; antitoxin YefM
D dnm_050200 Putative toxin-antitoxin system, antitoxin component, type II YefM K19159 yefM; antitoxin YefM
D dnm_004160 HipA kinase-like domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D dnm_069330 HipA-like N-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D dnm_069340 HipA-like C-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D dnm_076530 Helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D dnm_004650 Uncharacterized protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D dnm_070050 Toxin-antitoxin system, toxin component, HicA domain-containing protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D dnm_040110 Uncharacterized protein K18843 hicB; antitoxin HicB
D dnm_093400 Helix-turn-helix domain-containing protein K18843 hicB; antitoxin HicB
D dnm_087330 pspC; Phage shock protein C K03973 pspC; phage shock protein C
D dnm_087320 Uncharacterized protein K03970 pspB; phage shock protein B
D dnm_039250 Putative toxin-antitoxin system, toxin component, RelE/ParE-like K19092 parE1_3_4; toxin ParE1/3/4
D dnm_077800 putative toxin-antitoxin system, toxin component, RelE/ParE-like K19092 parE1_3_4; toxin ParE1/3/4
D dnm_005950 Toxin-antitoxin system, antitoxin component, HigB-like K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D dnm_043240 Toxin-antitoxin system, antitoxin component, HigB-like K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D dnm_050920 Toxin-antitoxin system, antitoxin component HigB domain-containing protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D dnm_001810 Toxin-antitoxin system, antitoxin component, HigB-like K07334 higB-1; toxin HigB-1
D dnm_023430 Toxin-antitoxin system, toxin component, HigB-like K07334 higB-1; toxin HigB-1
D dnm_034700 Toxin-antitoxin system, antitoxin component, HicB domain-containing protein K07334 higB-1; toxin HigB-1
D dnm_040260 Toxin-antitoxin system, antitoxin component HigB domain-containing protein K07334 higB-1; toxin HigB-1
D dnm_043160 higB2; Toxin-antitoxin system, toxin component, mRNA interferase K07334 higB-1; toxin HigB-1
D dnm_068840 higB3; Toxin-antitoxin system, toxin component, mRNA interferase K07334 higB-1; toxin HigB-1
D dnm_079170 higB4; Toxin-antitoxin system, toxin component, mRNA interferase K07334 higB-1; toxin HigB-1
D dnm_095670 higB5; Toxin-antitoxin system, toxin component, mRNA interferase K07334 higB-1; toxin HigB-1
D dnm_096610 Toxin-antitoxin system, toxin component, HigB-like K07334 higB-1; toxin HigB-1
D dnm_005940 HigA domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_043250 Uncharacterized protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_050930 HTH domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_085210 antotoxin domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D dnm_001790 higA1; Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_001800 higA2; Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_023420 HTH domain-containing protein K21498 higA-1; antitoxin HigA-1
D dnm_034710 Toxin-antitoxin system, toxin component, HicA domain-containing protein K21498 higA-1; antitoxin HigA-1
D dnm_040270 Toxin-antitoxin system, toxin component HigA domain-containing protein K21498 higA-1; antitoxin HigA-1
D dnm_043170 higA3; Antitoxin HigA K21498 higA-1; antitoxin HigA-1
D dnm_068810 higA4; Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_068850 higA5; Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_079160 higA6; Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_089100 Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_096620 higA7; Toxin-antitoxin system, antitoxin component K21498 higA-1; antitoxin HigA-1
D dnm_011040 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_020490 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_024100 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_024320 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_027830 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_081900 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D dnm_024090 Antidote-toxin recognition MazE domain-containing protein K18829 mvpT; antitoxin VapB
D dnm_021900 PIN domain-containing protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D dnm_000670 ftsZ; Cell division protein K03531 ftsZ; cell division protein FtsZ
D dnm_010190 mreB1; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_010210 mreB2; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_087180 Cell shape-determining protein, MreB-like K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_093150 mreB3; Cell shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D dnm_062850 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:dmm01504]
D dnm_015850 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_038950 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_075270 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_097310 Efflux transporter, RND family K03585 acrA; membrane fusion protein, multidrug efflux system
D dnm_015840 Acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D dnm_053430 putative RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D dnm_020650 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_048150 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_079750 Outer membrane efflux protein K12340 tolC; outer membrane protein
D dnm_015830 Efflux transporter, RND family K18903 oprC; outer membrane protein, multidrug efflux system
D dnm_088390 putative RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:dmm00536]
D dnm_017330 Peptidase, C1A family K01363 CTSB; cathepsin B [EC:3.4.22.1]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified [BR:dmm04990]
D dnm_055730 Leucine rich EPTP repeat-containing protein K24437 TSEAR; thrombospondin-type laminin G domain and EAR repeat-containing protein
D dnm_082760 VIT domain-containing protein K24510 VWA5; von Willebrand factor A domain-containing protein 5
D dnm_068770 WD40-repeat-containing K24745 WDR38; WD repeat-containing protein 38
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dmm03100]
D dnm_092925 tRNA-Ala3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D dnm_085205 tRNA-Ala2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D dnm_032715 tRNA-Arg4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_026405 tRNA-Arg3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_013535 tRNA-Arg1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_020593 tRNA-Arg2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D dnm_034333 tRNA-Asn1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D dnm_034336 tRNA-Asn2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D dnm_041103 tRNA-Asp1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D dnm_041106 tRNA-Asp2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D dnm_034462 tRNA-Cys1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D dnm_034466 tRNA-Cys2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D dnm_078705 tRNA-Gln1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D dnm_091115 tRNA-Gln2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D dnm_020823 tRNA-Glu1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D dnm_031865 tRNA-Glu2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D dnm_094855 tRNA-Gly4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_034464 tRNA-Gly2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_034468 tRNA-Gly3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_013596 tRNA-Gly1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D dnm_020596 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D dnm_092930 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D dnm_041145 tRNA-Leu4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_062875 tRNA-Leu8; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_011635 tRNA-Leu1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_030915 tRNA-Leu3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D dnm_001575 tRNA-Lys1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D dnm_020826 tRNA-Lys2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D dnm_010655 tRNA-Met1; tRNA-Met K14230 tRNA-Met; tRNA Met
D dnm_062925 tRNA-Met2; tRNA-Met K14230 tRNA-Met; tRNA Met
D dnm_069445 tRNA-Phe2; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D dnm_041170 tRNA-Pro1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D dnm_045050 tRNA-Pro2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D dnm_093180 tRNA-Pro3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D dnm_043606 tRNA-Ser4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_020100 tRNA-Ser2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_020095 tRNA-Ser1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_043603 tRNA-Ser3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D dnm_013592 tRNA-Thr1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D dnm_040040 tRNA-Thr3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D dnm_013630 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D dnm_013594 tRNA-Tyr1; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D dnm_089385 tRNA-Val3; tRNA-Val K14237 tRNA-Val; tRNA Val
D dnm_041109 tRNA-Val1; tRNA-Val K14237 tRNA-Val; tRNA Val
D dnm_063515 tRNA-Val2; tRNA-Val K14237 tRNA-Val; tRNA Val
D dnm_092935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D dnm_092920 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D dnm_089060 putative 3-beta hydroxysteroid dehydrogenase/isomerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D dnm_031520 2Fe-2S ferredoxin iron-sulfur protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D dnm_089940 hcrC; 4-hydroxybenzoyl-CoA reductase, gamma subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D dnm_089950 hcrB; 4-hydroxybenzoyl-CoA reductase, beta subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D dnm_009820 iorA1; Indolepyruvate oxidoreductase subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D dnm_055660 iorA2; Indolepyruvate oxidoreductase subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D dnm_009890 Oxidoreductase family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D dnm_055670 Putative indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D dnm_095470 2Fe-2S ferredoxin iron-sulfur protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D dnm_095480 Aldehyde oxidoreductase domain-containing protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D dnm_044010 FAD/NAD(P)-binding domain-containing protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D dnm_016540 Alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D dnm_038310 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D dnm_049450 msrA; Peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D dnm_016000 tpx; Thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D dnm_042010 NADH-quinone oxidoreductase K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D dnm_042020 NADH-quinone oxidoreductase K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3]
D dnm_042000 nuoF1; NADH-quinone oxidoreductase subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D dnm_085620 dfx; Desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D dnm_073740 Oxidoreductase domain-containing protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D dnm_072310 NADPH-dependent FMN reductase K03325 ACR3; arsenite transporter
D dnm_005580 Anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D dnm_074360 Radical SAM domain-containing protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D dnm_085390 Radical SAM domain-containing protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D dnm_089670 hbsD1; Hydroxybenzylsuccinate synthase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D dnm_089680 hbsD2; Hydroxybenzylsuccinate synthase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D dnm_023620 Radical SAM domain-containing protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D dnm_003300 qrcA; Menaquinone reductase, multiheme cytochrome c subunit K23300 qrcA; menaquinone reductase, multiheme cytochrome c subunit [EC:1.97.-.-]
D dnm_025080 pcm1; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D dnm_061230 pcm2; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D dnm_011970 SAM-dependent methyltransferase K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D dnm_065230 SAM-dependent RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D dnm_054120 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D dnm_055520 acyltransferase domain-containing protein K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D dnm_045840 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D dnm_008760 aat1; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D dnm_024270 aat2; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D dnm_093650 Transglutaminase-like domain-containing protein, DUF3488 and DUF4129 K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D dnm_023490 Aminoacyl transferase family protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D dnm_089160 Putative 3-oxoacyl-[acyl-carrier-protein] synthase 3 K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D dnm_056220 Glycosyl hydrolase catalytic domain-containing protein K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D dnm_016280 Glycosyl transferase, family I K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D dnm_087990 larB; Pyridinium-3,5-biscarboxylic acid mononucleotide synthase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D dnm_046650 lgt; Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D dnm_058210 apbE; FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D dnm_088550 glnE; Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D dnm_010520 Group II intron-encoded protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D dnm_026980 Group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D dnm_064820 Reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D dnm_077760 ltrA; Group II intron-encoded protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D dnm_095050 Reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D dnm_057130 PEP/pyruvate binding domain-containing protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D dnm_001010 Two component system histidine kinase, PAS domain-containing K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D dnm_097060 Sulfotransferase domain-containing protein K01025 SULT1; sulfotransferase [EC:2.8.2.-]
D dnm_031350 ADP-ribose binding module macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D dnm_041300 ADP-ribose binding module macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D dnm_053390 4-Hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D dnm_017620 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D dnm_071930 sixA; Phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D dnm_050710 DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D dnm_072910 Metal-dependent phosphohydrolase domain-contaning protein, HD domain-containing K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D dnm_061350 Two component system response regulator, HD domain-containing K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D dnm_075000 Two component system response regulator reciever and HD domains-containing protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D dnm_080810 Two component system response regulator, HD domain-containing K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D dnm_053690 Endonuclease family protein K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D dnm_073770 Hydrolase, TatD-like K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D dnm_071170 Nuclease, related to Staphylococcal nuclease (SNase) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D dnm_012240 Beta-lactamase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D dnm_011670 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D dnm_060860 Polysaccharide deacetylase domain-containing protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D dnm_091940 Carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D dnm_085980 Reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D dnm_066230 AAA ATPase-like domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D dnm_070200 AAA ATPase domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D dnm_093630 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D dnm_078870 SAM-dependent hydroxide adenosyltransferase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D dnm_089150 Alpha/beta hydrolase fold-containing protein K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D dnm_054500 Carbohydrate kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D dnm_058340 nnr; Bifunctional NAD(P)H-hydrate repair enzyme K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D dnm_087980 larE; Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D dnm_088040 larC; Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D dnm_009280 Uncharacterized protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D dnm_092420 icmF; Fused isobutyryl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D dnm_010930 CoA enzyme activase domain-containing protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D dnm_025900 CoA enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D dnm_068880 ATPase domain-containing protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D dnm_089040 AMP-dependent synthetase/ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D dnm_000220 UDP-N-acetylmuramate--L-alanine ligase, MurC-like K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D dnm_026850 rnfD1; Ion-translocating oxidoreductase complex, subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D dnm_035220 rnfD3; Ion-translocating oxidoreductase complex, subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D dnm_072470 rnfD2; Ion-translocating oxidoreductase complex, subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D dnm_026840 rnfC1; Ion-translocating oxidoreductase complex, subunit C K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D dnm_034990 rnfC3; Ion-translocating oxidoreductase complex, subunit C K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D dnm_072480 rnfC2; Ion-translocating oxidoreductase complex, subunit C K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D dnm_026890 rnfB1; Ion-translocating oxidoreductase complex, subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D dnm_035270 NADH dehydrogenase protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D dnm_059210 nqrA; Na(+)-translocating NADH-quinone reductase, subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D dnm_059220 nqrB; Na(+)-translocating NADH-quinone reductase, subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D dnm_059230 nqrC; NqrC: Na(+)-translocating NADH-quinone reductase, subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D dnm_035350 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D dnm_022170 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D dnm_022180 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D dnm_026700 Calcium-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D dnm_066400 sfsA; Sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D dnm_079360 putative ABC transporter, periplasmic binding protein K11930 torT; periplasmic protein TorT
D dnm_045470 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D dnm_080020 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D dnm_076760 Putative lactate utilization protein A, LutA K18928 lldE; L-lactate dehydrogenase complex protein LldE
D dnm_070260 Putative lactate utilization protein B, LutB-like K18929 lldF; L-lactate dehydrogenase complex protein LldF
D dnm_042410 Lactate utilization protein LUD domain-containing K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D dnm_058140 fdhD; Sulfur carrier protein K02379 fdhD; FdhD protein
D dnm_072250 4Fe-4S ferredoxin iron-sulfur binding domain-contining protein K05337 fer; ferredoxin
D dnm_083030 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin
D dnm_026860 rnfG1; Ion-translocating oxidoreductase complex, subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D dnm_035230 FMN-binding protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D dnm_072460 rnfG2; Ion-translocating oxidoreductase complex, subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D dnm_026870 rnfE1; Ion-translocating oxidoreductase complex, subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D dnm_035240 Putative electron transport complex protein, RnfE-like K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D dnm_072440 rnfE2; Ion-translocating oxidoreductase complex, subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D dnm_026880 rnfA1; Ion-translocating oxidoreductase complex, subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D dnm_035250 Putative electron transport complex protein, RnfA-like K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D dnm_072430 rnfA2; Ion-translocating oxidoreductase complex, subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D dnm_080160 Iron-sulfur cluster assembly protein, NifU-like K04488 iscU; nitrogen fixation protein NifU and related proteins
D dnm_084120 Iron-sulfur cluster assembly protein, NifU-like K04488 iscU; nitrogen fixation protein NifU and related proteins
D dnm_062840 nifU; Nitrogen fixation protein K13819 K13819; NifU-like protein
D dnm_069800 von Willebrand factor domain-containing protein K02448 norD; nitric oxide reductase NorD protein
D dnm_048880 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein
D dnm_089640 hbsE; Chaperone associated with benzylsuccinate synthase K04748 norQ; nitric oxide reductase NorQ protein
D dnm_076480 qmoA; Quinone interacting membrane bound oxidoreductase, subunit A K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D dnm_076490 qmoB; Quinone interacting membrane bound oxidoreductase, subunit B K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D dnm_076500 qmoC; Quinone interacting membrane bound oxidoreductase, subunit C K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC
D dnm_022720 DUF4040 K14113 ehbD; energy-converting hydrogenase B subunit D
D dnm_006990 Putative electron transfer flavoprotein, subunit alpha K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_029070 Electron transfer flavoprotein subunit beta family protein K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_051840 etfB1; Putative electron transfer flavoprotein, subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_061180 etfB2; Electron transfer flavoprotein, subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_066520 etfB3; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_070090 BamO; Electron transfer flavoprotein, subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_089840 etfB4; Electron transfer flavoprotein, subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D dnm_099630 Uridine kinase K00947 mosAB; molybdenum storage protein
D dnm_084920 dsrC; Dissimilatory sulfite reductase, gamma subunit K23077 dsrC; dissimilatory sulfite reductase related protein
D dnm_095250 Dodecin domain-containing protein K09165 K09165; dodecin
D dnm_095260 Dodecin domain-containing protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D dnm_058960 Uncharacterized protein K06203 cysZ; CysZ protein
D dnm_025100 Peptidase, M14 family K14054 mpaA; murein peptide amidase A
D dnm_037530 Peptidase, M14 family K14054 mpaA; murein peptide amidase A
D dnm_021320 Pyridoxal phosphate homeostasis protein, YggS-family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D dnm_011660 TIGR00374 family protein K07027 K07027; glycosyltransferase 2 family protein
D dnm_016230 TIGR00374 family protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D dnm_059750 Uncharacterized protein K03688 ubiB; ubiquinone biosynthesis protein
D dnm_099110 Putative protein kinase, ubiB-like K03688 ubiB; ubiquinone biosynthesis protein
D dnm_037240 mobB; Molybdopterin-guanine dinucleotide biosynthesis adapter protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D dnm_046180 CoA ligase domain-containing protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D dnm_006760 cspA1; Major cold shock protein K03704 cspA; cold shock protein
D dnm_016500 cspA2; Major cold shock protein K03704 cspA; cold shock protein
D dnm_020780 cspA3; Major cold shock protein K03704 cspA; cold shock protein
D dnm_040540 Cold shock protein K03704 cspA; cold shock protein
D dnm_096250 cspA4; Major cold shock protein K03704 cspA; cold shock protein
D dnm_000320 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
D dnm_075750 DUF370 K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D dnm_039040 Metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D dnm_028040 clpS; ATP-dependent Clp protease adapter protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D dnm_041140 tig; Trigger factor K03545 tig; trigger factor
D dnm_054180 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D dnm_036980 hypE; Carbamoyl dehydratase K04655 hypE; hydrogenase expression/formation protein HypE
D dnm_087390 HAD superfamily hydrolase family protein K04655 hypE; hydrogenase expression/formation protein HypE
D dnm_078560 Glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D dnm_077440 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D dnm_003160 Putative cytochrome c biogenesis protein, CcsB-like K07399 resB; cytochrome c biogenesis protein
D dnm_080230 XdhC domains-containing protein K07402 xdhC; xanthine dehydrogenase accessory factor
D dnm_014480 Peptidase and NfeD-like domain-containing protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D dnm_047360 DUF1156 K07445 K07445; putative DNA methylase
D dnm_065950 SAM-depentend metyhlase domain-containing protein K07445 K07445; putative DNA methylase
D dnm_057490 Uncharacterized protein K07454 K07454; putative restriction endonuclease
D dnm_082540 HNH endonuclease family protein K07454 K07454; putative restriction endonuclease
D dnm_095120 HNH nuclease domain-containing protein K07454 K07454; putative restriction endonuclease
D dnm_096280 UPF0758 K03630 radC; DNA repair protein RadC
D dnm_098240 Putative DNA repair protein K03630 radC; DNA repair protein RadC
D dnm_033960 UPF0102 K07460 yraN; putative endonuclease
D dnm_052380 dprA; DNA-processing protein K04096 smf; DNA processing protein
D dnm_066260 AAA family ATPase K07478 ycaJ; putative ATPase
D dnm_013400 Exonuclease domain-containing protein K07501 K07501; 3'-5' exonuclease
D dnm_004400 Putative transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_005930 Putative transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_015770 Putative transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_027690 Putative transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_030040 Transposase IS1 domain-containing protein K07480 insB; insertion element IS1 protein InsB
D dnm_030070 Transposase IS1 domain-containing protein K07480 insB; insertion element IS1 protein InsB
D dnm_046790 Putative transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_075420 Putative transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_075530 Transposase IS1 domain-containing protein K07480 insB; insertion element IS1 protein InsB
D dnm_085460 Transposase, IS1 family K07480 insB; insertion element IS1 protein InsB
D dnm_048630 Transposase domain-containing protein K07481 K07481; transposase, IS5 family
D dnm_054680 Transposase domain-containing protein, DUF772 K07481 K07481; transposase, IS5 family
D dnm_056290 Transposase domain-containing protein, DUF772 K07481 K07481; transposase, IS5 family
D dnm_057100 Transposase domain-containing protein K07481 K07481; transposase, IS5 family
D dnm_058930 Transposase domain-containing protein K07481 K07481; transposase, IS5 family
D dnm_059180 Transposase domain-containing protein, DUF772 K07481 K07481; transposase, IS5 family
D dnm_060250 Transposase domain-containing protein K07481 K07481; transposase, IS5 family
D dnm_065780 Transposase domain-containing protein, DUF772 K07481 K07481; transposase, IS5 family
D dnm_091480 Transposase, IS4 family K07481 K07481; transposase, IS5 family
D dnm_023110 Transposase DDE domain-containing protein K07485 K07485; transposase
D dnm_027010 Transposase DDE domain-containing protein K07485 K07485; transposase
D dnm_034650 Transposase DDE domain-containing protein K07485 K07485; transposase
D dnm_041380 Transposase domain-containing protein K07485 K07485; transposase
D dnm_058920 Transposase DDE domain-containing protein K07485 K07485; transposase
D dnm_014790 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_028520 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_028540 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_028560 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_039850 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_044550 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_050350 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_053150 Transposase K07486 K07486; transposase
D dnm_053170 Transposase K07486 K07486; transposase
D dnm_053240 Transposase K07486 K07486; transposase
D dnm_072140 Transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D dnm_075520 Transposase IS1 domain-containing protein K07489 K07489; transposase
D dnm_039610 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_039670 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_050340 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_054540 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_054550 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_070450 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_081580 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_094720 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_096650 Transposase IS200-like domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_097450 transposase domain-containing protein K07491 rayT; REP-associated tyrosine transposase
D dnm_085910 Transposase IS605 family domain-containing protein K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D dnm_068400 PspA/IM30 family protein domain-containing protein K03969 pspA; phage shock protein A
D dnm_087310 pspA; Phage shock protein A K03969 pspA; phage shock protein A
D dnm_088160 Phage shock protein A K03969 pspA; phage shock protein A
D dnm_020120 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D dnm_086330 Amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D dnm_071400 Acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D dnm_074060 Acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D dnm_075250 Multidrug resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D dnm_040300 Phosphate transporter family K03306 TC.PIT; inorganic phosphate transporter, PiT family
D dnm_093520 Phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D dnm_007490 Na+/solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D dnm_069380 Putative Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D dnm_078190 Putative Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D dnm_081040 Putative Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D dnm_060840 Putative polysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
D dnm_074960 Uncharacterized protein K23243 rcnB; nickel/cobalt homeostasis protein
C 99978 Cell growth
D dnm_042890 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein K07321 cooC; CO dehydrogenase maturation factor
D dnm_045500 putative cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D dnm_063880 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D dnm_088330 R3H domain-containing protein K06346 jag; spoIIIJ-associated protein
D dnm_061500 Sporulation related domain-containing protein K06377 spo0M; sporulation-control protein
D dnm_041090 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D dnm_044920 Anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D dnm_071440 Anti-sigma-B factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D dnm_043300 SpoVR like protein K06415 spoVR; stage V sporulation protein R
D dnm_090270 Peptidase M23 domain-containing protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D dnm_082260 Peptidoglycan-synthase activator, LpoB-like K07337 K07337; penicillin-binding protein activator
D dnm_027490 mglA1; Mutual gliding-motility protein K24105 mglA; mutual gliding-motility protein MglA
D dnm_059280 mglA2; Mutual gliding-motility protein K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D dnm_009020 TerD domain-containing protein K05792 terA; tellurite resistance protein TerA
D dnm_090410 TerD domain-containing protein K05795 terD; tellurium resistance protein TerD
D dnm_090450 TerD domain-containing protein K05795 terD; tellurium resistance protein TerD
D dnm_053990 Carbon starvation protein, CstA-like K06200 cstA; carbon starvation protein
D dnm_008310 typA; GTP-binding protein K06207 typA; GTP-binding protein
D dnm_026440 Uncharacterized protein K07168 K07168; CBS domain-containing membrane protein
D dnm_072920 phoH; Phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D dnm_043020 prkA; Serine protein kinase K07180 prkA; serine protein kinase
D dnm_027900 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D dnm_095310 Cyclic nucleotide-binding domain-containing protein, DUF294 K07182 K07182; CBS domain-containing protein
D dnm_002210 SH3 domain-contaning protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D dnm_096040 Outer membrane lipoprotein carrier protein domain-conaining protein, LolA-like K03634 lolA; outer membrane lipoprotein carrier protein
D dnm_049670 mlaA; Intermembrane phospholipid transport system lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D dnm_083130 putative outer membrane chaperone, Skp family K06142 hlpA; outer membrane protein
D dnm_099750 DUF481 K07283 ydiY; putative salt-induced outer membrane protein
D dnm_016820 Efflux transporter, RND family K02005 ABC.CD.TX; HlyD family secretion protein
D dnm_076840 Cell envelope integrity protein CreD domain-containing protein K06143 creD; inner membrane protein
C 99994 Others
D dnm_064020 phoU; Phosphate-specific transport system accessory protein K02039 phoU; phosphate transport system protein
D dnm_044350 Tellurite resistance protein, TerB-like K05793 terB; tellurite resistance protein TerB
D dnm_072590 Tellurite resistance protein, TerB-like K05793 terB; tellurite resistance protein TerB
D dnm_077670 Bacteriaohemerythrin K07216 hr; hemerythrin
D dnm_082020 Bacteriaohemerythrin K07216 hr; hemerythrin
D dnm_055860 Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D dnm_084260 DNA-binding and PBP domains-containing protein K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D dnm_036850 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D dnm_005570 Uncharacterized protein K05811 yfiM; putative lipoprotein
D dnm_044780 Transferase hexapeptide repeat containing protein K02617 paaY; phenylacetic acid degradation protein
D dnm_060980 Patatin-like phospholipase domain-containing protein K07001 K07001; NTE family protein
D dnm_056330 HAD hydrolase family protein K07025 K07025; putative hydrolase of the HAD superfamily
D dnm_010730 UPF0051 K09014 sufB; Fe-S cluster assembly protein SufB
D dnm_004510 Putative hydrolase domain-containing protein K07038 K07038; inner membrane protein
D dnm_064420 Metal-dependent hydrolase, LexA-binding K07038 K07038; inner membrane protein
D dnm_061220 DUF368 K08974 K08974; putative membrane protein
D dnm_061080 DUF350 K08989 K08989; putative membrane protein
D dnm_006090 Cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
C 99997 Function unknown
D dnm_038460 Anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D dnm_052600 Radical SAM domain-containing protein K06871 K06871; uncharacterized protein
D dnm_034210 DUF255 K06888 K06888; uncharacterized protein
D dnm_014960 Serine aminopeptidase, S33-type K06889 K06889; uncharacterized protein
D dnm_086010 Bax inhibitor 1-related domain-containing protein K06890 K06890; uncharacterized protein
D dnm_051380 Gp25-like domain-containing protein K06903 W; Bacteriophage baseplate protein W
D dnm_051570 Phage tail domain-containing protein K06907 FI; Bacteriophage tail sheath protein
D dnm_017970 AAA ATPase-like domain-containing protein K06926 K06926; uncharacterized protein
D dnm_035670 AAA ATPase domain-containing protein K06926 K06926; uncharacterized protein
D dnm_057370 AAA ATPase-like domain-containing protein K06926 K06926; uncharacterized protein
D dnm_081830 CoA binding protein K06929 K06929; uncharacterized protein
D dnm_053920 DUF134 K06933 K06933; uncharacterized protein
D dnm_084420 PCC domain-containing protein, DUF296 K06934 K06934; uncharacterized protein
D dnm_020150 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D dnm_035400 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D dnm_038700 Uncharacterized protein K06940 K06940; uncharacterized protein
D dnm_042310 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D dnm_044300 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D dnm_059000 Putative zinc-or iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D dnm_076820 Uncharacterized protein K06940 K06940; uncharacterized protein
D dnm_036410 HD domain-containing protein K06950 K06950; uncharacterized protein
D dnm_081980 HDIG domain-containing protein K06951 K06951; uncharacterized protein
D dnm_033900 Uncharacterized protein K06960 K06960; uncharacterized protein
D dnm_055960 Zinc metallopeptidase K06973 K06973; uncharacterized protein
D dnm_026320 Succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D dnm_006100 Membrane transport protein domain-containing protein K07003 K07003; uncharacterized protein
D dnm_039910 Transport protein domain-containing protein K07003 K07003; uncharacterized protein
D dnm_051640 Membrane transport protein domain-containing protein K07003 K07003; uncharacterized protein
D dnm_065720 Cadherin and dockerin domain-containing protein K07004 K07004; uncharacterized protein
D dnm_058190 Pyridoxamine 5'-phosphate oxidase domain-containing protein K07005 K07005; uncharacterized protein
D dnm_077280 4-vinyl reductase domain-containing protein K07013 K07013; uncharacterized protein
D dnm_091770 alpha/beta hydrolase fold-containing K07018 K07018; uncharacterized protein
D dnm_088410 APH domain-containing protein K07028 K07028; uncharacterized protein
D dnm_018710 Putative transporter, GPR1/FUN34/yaaH family K07034 K07034; uncharacterized protein
D dnm_057800 Amidohydrolase domain-contaning protein K07045 K07045; uncharacterized protein
D dnm_085270 Amidohydrolase K07045 K07045; uncharacterized protein
D dnm_080050 TatD related DNase K07051 K07051; uncharacterized protein
D dnm_094970 Putative toxin-antitoxin system, toxin component, PIN family K07063 K07063; uncharacterized protein
D dnm_019860 PIN domain-containing protein K07065 K07065; uncharacterized protein
D dnm_039560 PIN domain-containing protein K07065 K07065; uncharacterized protein
D dnm_084620 PIN domain-containing protein K07065 K07065; uncharacterized protein
D dnm_093460 PIN domain-containing protein K07065 K07065; uncharacterized protein
D dnm_094060 PIN domain-containing protein K07065 K07065; uncharacterized protein
D dnm_096690 DUF3368 K07066 K07066; uncharacterized protein
D dnm_055570 DUF35 K07068 K07068; uncharacterized protein
D dnm_021460 Epimerase, SDR39I1 family K07071 K07071; uncharacterized protein
D dnm_041520 Epimerase, SDR39I1 family K07071 K07071; uncharacterized protein
D dnm_083310 Uncharacterized protein K07074 K07074; uncharacterized protein
D dnm_087440 DNA repair polymerase family protein K07074 K07074; uncharacterized protein
D dnm_020290 Nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D dnm_074260 Nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D dnm_013190 TRAP transporter, receptor protein K07080 K07080; uncharacterized protein
D dnm_038020 TRAP transporter, receptor protein K07080 K07080; uncharacterized protein
D dnm_094310 TRAP transporter, receptor protein K07080 K07080; uncharacterized protein
D dnm_046620 putative permase DUF318 K07089 K07089; uncharacterized protein
D dnm_078820 putative permase DUF318 K07089 K07089; uncharacterized protein
D dnm_002260 Transmembrane domain-containing protein, TauE-like K07090 K07090; uncharacterized protein
D dnm_032090 Transmembrane domain-containing protein, TauE-like K07090 K07090; uncharacterized protein
D dnm_035320 Transmembrane domain-containing protein, TauE-like K07090 K07090; uncharacterized protein
D dnm_050860 Transmembrane domain-containing protein, TauE-like K07090 K07090; uncharacterized protein
D dnm_051130 Transmembrane domain-containing protein, TauE-like K07090 K07090; uncharacterized protein
D dnm_068390 Putative sulfite/organosulfonate ABC transporter, permease protein K07090 K07090; uncharacterized protein
D dnm_071210 Putative ABC sulfite/organosulfonate transporter, permease protein K07090 K07090; uncharacterized protein
D dnm_031830 Phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D dnm_074560 Phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D dnm_004120 Metallophosphoesterase family protein K07096 K07096; uncharacterized protein
D dnm_027400 Metallophosphoesterase family protein K07098 K07098; uncharacterized protein
D dnm_054470 Putative selenium metabolism protein, YedE family K07112 K07112; uncharacterized protein
D dnm_012950 FAD dependent protein domain-containing protein K07137 K07137; uncharacterized protein
D dnm_084610 4Fe-4S dicluster domain-containing protein, DUF362 K07138 K07138; uncharacterized protein
D dnm_072630 Radical SAM protein, YhcC-like K07139 K07139; uncharacterized protein
D dnm_026260 DUF1624 and DUF418 K07148 K07148; uncharacterized protein
D dnm_010680 Zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D dnm_051870 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D dnm_088300 Putative membrane protein insertion efficiency factor, YidD-like K08998 K08998; uncharacterized protein
D dnm_083730 Bifunctional nuclease domain-containing protein K08999 K08999; uncharacterized protein
D dnm_031800 Yqey-like protein K09117 K09117; uncharacterized protein
D dnm_032520 DUF99 K09120 K09120; uncharacterized protein
D dnm_085260 Pyruvate kinase C-terminal domain-containing protein K09126 K09126; uncharacterized protein
D dnm_098070 DUF167 K09131 K09131; uncharacterized protein
D dnm_023220 HEPN domain-containing protein K09132 K09132; uncharacterized protein
D dnm_042130 DUF190 K09137 K09137; uncharacterized protein
D dnm_072870 Putative heavy-metal chelation domain-containing protein, DUF4213 domain-containing K09138 K09138; uncharacterized protein
D dnm_059820 AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein
D dnm_053280 DUF711 K09157 K09157; uncharacterized protein
D dnm_019380 FAD-binding domain-containing protein K09160 K09160; uncharacterized protein
D dnm_094550 DUF985 K09705 K09705; uncharacterized protein
D dnm_082640 Uncharacterized protein K09740 K09740; uncharacterized protein
D dnm_036910 DUF790 K09744 K09744; uncharacterized protein
D dnm_094900 DUF503 K09764 K09764; uncharacterized protein
D dnm_043290 DUF444 K09786 K09786; uncharacterized protein
D dnm_075690 Trm112p-like protein K09791 K09791; uncharacterized protein
D dnm_090240 Divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D dnm_004500 toxin component type II BrnT domain-containing protein K09803 K09803; uncharacterized protein
D dnm_009840 Putative toxin-antitoxin system, toxin component, type II BrnT K09803 K09803; uncharacterized protein
D dnm_030650 Putative toxin-antitoxin system, toxin component, type II BrnT K09803 K09803; uncharacterized protein
D dnm_047190 Putative toxin-antitoxin system, toxin component, type II BrnT K09803 K09803; uncharacterized protein
D dnm_047500 Putative toxin-antitoxin system, toxin component, type II BrnT K09803 K09803; uncharacterized protein
D dnm_068790 Putative toxin-antitoxin system, toxin component, type II BrnT K09803 K09803; uncharacterized protein
D dnm_070060 Toxin-antitoxin system, toxin component domain-containing protein K09803 K09803; uncharacterized protein
D dnm_081190 toxin component type II BrnT domain-containing protein K09803 K09803; uncharacterized protein
D dnm_083940 Putative toxin-antitoxin system, toxin component, type II BrnT K09803 K09803; uncharacterized protein
D dnm_090570 Uncharacterized protein K09803 K09803; uncharacterized protein
D dnm_095170 Toxin-antitoxin system, toxin component, BrnT-like K09803 K09803; uncharacterized protein
D dnm_082250 tetratricopeptide repeat-containing K09859 K09859; uncharacterized protein
D dnm_027880 UPF0270 K09898 K09898; uncharacterized protein
D dnm_021980 YcgL-like domain-containing protein K09902 K09902; uncharacterized protein
D dnm_052180 DUF2062 K09928 K09928; uncharacterized protein
D dnm_047530 DUF2065 K09937 K09937; uncharacterized protein
D dnm_050630 Uncharacterized protein K09986 K09986; uncharacterized protein
D dnm_065370 Uncharacterized protein K09989 K09989; uncharacterized protein
D dnm_071140 5'(3')-deoxyribonucleotidase family protein K05967 K05967; uncharacterized protein
D dnm_036140 DUF2156 K01163 K01163; uncharacterized protein
D dnm_040310 DUF47 K07220 K07220; uncharacterized protein
D dnm_093510 DUF47 K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024