+E	Transcription factors	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Factors - Dehalococcoides mccartyi CG4</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  Basic leucine zipper (bZIP)
C    AP-1(-like) components, Jun
C    AP-1(-like) components, Fos
C    AP-1(-like) components, Maf
C    AP-1(-like) components, NF-E2
C    AP-1(-like) components, Fungal regulators
C    AP-1(-like) components, CRE-BP/ATF
C    CREB
C    C/EBP-like factors
C    bZIP/PAR
C    Plant bZIP factors
C    ZIP only
B  Basic helix-loop-helix (bHLH)
C    Ubiquitous (class A) factors
C    Myogenic transcription factors
C    Achaete-Scute
C    Tal/Twist/Atonal/Hen, Lymphoid factors
C    Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C    Tal/Twist/Atonal/Hen, HEN
C    Tal/Twist/Atonal/Hen, Mesp
C    Tal/Twist/Atonal/Hen, Atonal
C    Tal/Twist/Atonal/Hen, Pancreatic factors
C    Hairy, Hairy/E(SPL)
C    Hairy, Fungal regulators
C    Factors with PAS domain
C    Yabby
C    INO
C    HLH domain only
B  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C    Ubiquitous bHLH-ZIP factors
C    Cell cycle controlling factors, Myc
C    Cell cycle controlling factors, Mad/Max
C    Other bHLH-ZIP factors
B  Other basic domains
C    NF-1
C    RF-X
C    AP-2 (bHSH)
B  Zinc finger
C    Cys4 thyroid hormone receptor-like
C    Cys4 hepatocyte nuclear factor 4-like
C    Cys4 estrogen receptor-like
C    Cys4 nerve growth factor IB-like
C    Cys4 Fushi tarazu-F1-like
C    Cys4 germ cell nuclear factor
C    Cys4 Knirps/DAX1-like
C    Cys4 GATA-factors
C    Cys2His2 SP/KLF family and related proteins
C    Cys2His2 GLI-like
C    Cys2His2 Snail
C    Cys2His2 BTB-ZF factors
C    Cys2His2 BED
C    Cys2His2 PRDM
C    Cys2His2 metabolic regulators in fungi
C    Cys2His2 others
C    Cys2HisCys zinc factors
C    Cys3His zinc factors
C    Cys2CysHis zinc factors
C    CXXC CpG-binding proteins
D      X793_00450 DNA methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
C    Cys6 metabolic regulators in fungi
C    Other zinc fingers
B  Helix-turn-helix
C    Homeo domain ANTP: HOXL
C    Homeo domain ANTP: NKL
C    Homeo domain Paired-related
C    Homeo domain LIM
C    Homeo domain POU
C    Homeo domain SINE
C    Homeo domain ZF
C    Homeo domain CUT
C    Homeo domain PROS
C    Homeo domain TALE
C    Homeo domain other
C    Fork head/winged helix developmental regulators
C    Fork head/winged helix tissue-specific regulators
C    Fork head/winged helix cell cycle-controlling factors, E2F
C    Fork head/winged helix cell cycle-controlling factors, DP
C    Fork head/winged helix other regulators
C    Heat shock factors
C    Tryptophan clusters Myb, Myb-factors
C    Tryptophan clusters Myb, Myb-like factors
C    Tryptophan clusters Ets-type
C    Tryptophan clusters interferon-regulating factors
C    TEA domain
C    ARID
B  beta-Scaffold factors with minor groove contacts
C    RHR (Rel homology region) Rel/Ankyrin
C    RHR (Rel homology region) Ankyrin only
C    RHR (Rel homology region) NF-AT
C    STAT
C    p53
C    MADS-box regulators of differentiation, MEF-2
C    MADS-box regulators of differentiation, Homeotic genes
C    MADS-box regulators of differentiation, Yeast regulators
C    MADS-box responders to external signals
C    SAND domain-containing proteins
C    TATA-binding proteins
C    HMG SOX
C    HMG TCF-1
C    HMG2-related
C    UBF
C    Other HMG box factors
C    Heteromeric CCAAT factors
C    Grainyhead
C    Cold-shock domain factors, DbpA-like
C    Cold-shock domain factors, YB-1/DbpB-like
C    Cold-shock domain factors, FRG Y2-like
C    Runt
C    MYRF
B  Other transcription factors
C    HMGI(Y)
C    NUPR
E        Line #4
C    Pocket domain Rb
C    Pocket domain CBP
C    T-box
C    DMRT
C    LRRFIP
C    TCP
C    AP2/ERF
C    WRKY
C    LOB
C    Copper-fist proteins fungal regulators
C    Others
#
A<b>Prokaryotic type</b>
B  Helix-turn-helix
C    AraC family
C    LysR family
C    DeoR family
C    LacI family
C    GntR family
C    TetR/AcrR family
D      X793_07265 TetR family transcriptional regulator	K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator 
C    Lrp/AsnC family
C    LuxR family
C    MarR family
D      X793_05295 MarR family transcriptional regulator	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator 
D      X793_06970 MarR family transcriptional regulator	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator 
D      X793_07065 MarR family transcriptional regulator	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator 
D      X793_07095 MarR family transcriptional regulator	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator 
C    MerR family
D      X793_07025 MerR family transcriptional regulator	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator 
D      X793_06640 MerR family transcriptional regulator	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator 
D      X793_06475 MerR family transcriptional regulator	K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR 
D      X793_05890 MerR family transcriptional regulator	K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator 
C    Fur family
D      X793_06865 Fur family transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator 
D      X793_05175 Fur family transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator 
D      X793_00100 Fur family transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator 
D      X793_02810 Fur family transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator 
C    IclR family
C    CRP/FNR family
D      X793_01180 Crp/Fnr family transcription regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein 
C    Rrf2 family
D      X793_07335 AsnC family transcriptional regulator	K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor 
C    ArsR family
D      X793_04750 ArsR family transcriptional regulator	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor 
D      X793_05705 ArsR family transcriptional regulator	K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons 
C    XRE family
C    PadR family
C    Other families
D      X793_00515 iron-dependent transcriptional regulator	K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator 
D      X793_04125 biotin--acetyl-CoA-carboxylase ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] 
D      X793_03915 plasmid stabilization protein	K18831 higA; HTH-type transcriptional regulator / antitoxin HigA 
D      X793_04535 hypothetical protein	K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI 
D      X793_02415 XRE family transcriptional regulator	K07729 K07729; putative transcriptional regulator 
D      X793_07150 Cro/Cl family transcriptional regulator	K07729 K07729; putative transcriptional regulator 
D      X793_06120 XRE family transcriptional regulator	K07729 K07729; putative transcriptional regulator 
D      X793_06840 Crp/Fnr family transcriptional regulator	K07730 K07730; putative transcriptional regulator 
B  Ribbon-helix-helix
C    CopG family
C    Other families
B  Other transcription factors
C    BglG family
C    Others
D      X793_01100 transcriptional regulator	K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator 
D      X793_01225 transcriptional regulator	K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator 
D      X793_07345 transcriptional regulator	K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator 
D      X793_07355 transcriptional regulator	K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator 
D      X793_06900 plasmid partitioning protein ParB	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein 
D      X793_06425 HrcA family transcriptional regulator	K03705 hrcA; heat-inducible transcriptional repressor 
D      X793_05420 uracil phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] 
D      X793_03725 conjugal transfer protein TraR	K06204 dksA; RNA polymerase-binding transcription factor 
D      X793_06290 molecular chaperone DnaK	K06204 dksA; RNA polymerase-binding transcription factor 
D      X793_01405 nrdR; NrdR family transcriptional regulator	K07738 nrdR; transcriptional repressor NrdR 
D      X793_01385 cell division protein MraZ	K03925 mraZ; transcriptional regulator MraZ 
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: June 7, 2024
#<br>Classification taken and modified from <a href="http://www.gene-regulation.com/pub/databases.html#transfac">TRANSFAC 7.0</a>