+D GENES KO
#
KEGG Orthology (KO) - Dichelobacter nodosus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dno00010]
D DNO_0163 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNO_0468 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNO_0166 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DNO_0814 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNO_0092 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNO_1036 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DNO_0706 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNO_0362 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNO_1200 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNO_0630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DNO_0544 aceE; pyruvate dehydrogenase e1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DNO_0545 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00020 Citrate cycle (TCA cycle) [PATH:dno00020]
D DNO_0329 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DNO_0331 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_1313 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DNO_1312 suC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNO_1026 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNO_1027 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNO_1028 frdC; fumarate reductase, subunit C K00246 frdC; succinate dehydrogenase subunit C
D DNO_1029 fumarate reductase, subunit D K00247 frdD; succinate dehydrogenase subunit D
D DNO_0506 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DNO_0544 aceE; pyruvate dehydrogenase e1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DNO_0545 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:dno00030]
D DNO_0163 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNO_1223 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNO_1222 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D DNO_1236 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DNO_0540 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DNO_1035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNO_0522 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DNO_0909 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DNO_0065 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DNO_1099 trxB; thioredoxin reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9]
D DNO_0166 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DNO_0468 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:dno00040]
D DNO_0327 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNO_0540 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:dno00051]
D DNO_0907 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DNO_0468 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNO_0583 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D DNO_0166 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DNO_0814 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNO_0610 PTS system, fructose IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:dno00052]
D DNO_0941 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNO_0327 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNO_0338 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DNO_0703 PTS system, fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:dno00500]
D DNO_0327 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNO_0163 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dno00520]
D DNO_0021 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DNO_0309 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D DNO_0528 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DNO_0815 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DNO_1140 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DNO_1323 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D DNO_0537 gph; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D DNO_0512 conserved hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D DNO_0513 nucleotidyl transferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D DNO_0853 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DNO_0436 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DNO_0327 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNO_0941 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNO_0338 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DNO_0163 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNO_0907 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:dno00620]
D DNO_0544 aceE; pyruvate dehydrogenase e1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DNO_0545 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_1334 pflB; pyruvate-formate lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DNO_0447 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNO_0448 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DNO_1200 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNO_1091 accA; acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNO_0420 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNO_0421 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNO_0405 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNO_0735 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D DNO_0020 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DNO_0506 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DNO_1026 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNO_1027 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNO_1028 frdC; fumarate reductase, subunit C K00246 frdC; succinate dehydrogenase subunit C
D DNO_1029 fumarate reductase, subunit D K00247 frdD; succinate dehydrogenase subunit D
D DNO_0630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dno00630]
D DNO_0848 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DNO_0476 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNO_1069 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DNO_1197 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_1070 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:dno00640]
D DNO_0447 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNO_0448 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_1334 pflB; pyruvate-formate lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DNO_0367 zinc-binding dehydrogenase family protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D DNO_1091 accA; acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNO_0420 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNO_0421 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNO_0405 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNO_1312 suC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNO_1313 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:dno00650]
D DNO_1136 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DNO_1026 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNO_1027 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNO_1028 frdC; fumarate reductase, subunit C K00246 frdC; succinate dehydrogenase subunit C
D DNO_1029 fumarate reductase, subunit D K00247 frdD; succinate dehydrogenase subunit D
D DNO_1334 pflB; pyruvate-formate lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DNO_0799 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
D DNO_1312 suC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNO_1313 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:dno00562]
D DNO_0803 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DNO_0814 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dno00190]
D DNO_0618 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DNO_1026 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNO_1027 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNO_1028 frdC; fumarate reductase, subunit C K00246 frdC; succinate dehydrogenase subunit C
D DNO_1029 fumarate reductase, subunit D K00247 frdD; succinate dehydrogenase subunit D
D DNO_0100 cydA; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNO_0099 cydB; cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DNO_0098 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DNO_1144 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DNO_1142 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DNO_1143 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DNO_1145 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DNO_1141 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DNO_1148 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DNO_1146 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DNO_1147 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DNO_0198 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DNO_1106 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:dno00710]
D DNO_1036 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DNO_0092 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNO_0166 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DNO_0468 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNO_1035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNO_0522 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DNO_0814 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNO_0540 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DNO_0020 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Carbon fixation pathways in prokaryotes [PATH:dno00720]
D DNO_0630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DNO_0506 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DNO_1026 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNO_1027 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNO_1028 frdC; fumarate reductase, subunit C K00246 frdC; succinate dehydrogenase subunit C
D DNO_1029 fumarate reductase, subunit D K00247 frdD; succinate dehydrogenase subunit D
D DNO_1313 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DNO_1312 suC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNO_1091 accA; acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNO_0420 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNO_0421 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNO_0405 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNO_1298 folD; methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DNO_0863 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DNO_1022 methylenetetrahydrofolate reductase family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DNO_0448 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DNO_0447 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:dno00680]
D DNO_0476 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNO_0848 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DNO_0362 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNO_0166 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DNO_0468 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNO_0447 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNO_0448 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DNO_0630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DNO_0706 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNO_0670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DNO_1015 conserved hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:dno00910]
D DNO_0239 2-nitropropane dioxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DNO_1073 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DNO_1085 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
D DNO_1011 cysQ; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dno00061]
D DNO_1091 accA; acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNO_0420 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNO_0421 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNO_0405 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNO_1210 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DNO_1208 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DNO_1207 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DNO_0315 fabB; beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DNO_1211 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNO_1209 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0531 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0314 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D DNO_0684 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DNO_0074 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DNO_1002 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:dno00071]
D DNO_1136 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DNO_0930 hypothetical protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D DNO_1002 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dno00561]
D DNO_0213 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DNO_1206 plsX; fatty acid-phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DNO_1077 conserved hypothetical membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DNO_1058 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DNO_0225 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:dno00564]
D DNO_0293 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DNO_0212 FAD dependent oxidoreductase family protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DNO_1077 conserved hypothetical membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DNO_1058 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DNO_0225 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DNO_0718 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DNO_0565 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DNO_1101 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DNO_0306 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DNO_0668 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D DNO_0830 acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dno00230]
D DNO_0957 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DNO_0065 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DNO_0088 purF; amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNO_0185 vrlG; glutamine amidotransferase domain protein VrlG K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNO_0940 purD; phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DNO_0207 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DNO_1110 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D DNO_1113 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DNO_0078 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DNO_0077 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DNO_1112 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DNO_0667 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DNO_0918 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DNO_0414 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DNO_0959 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DNO_0699 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DNO_0942 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DNO_0023 hypoxanthine phosphoribosyltransferase, Phosphoribosyltransferase family K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DNO_0376 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DNO_0663 rdgB; Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DNO_0380 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DNO_0645 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DNO_0607 nrdA; ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNO_0608 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DNO_0910 nrdD; ribonucleoside reductase family protein, class III K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DNO_0254 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D DNO_1020 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DNO_0369 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DNO_0017 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D DNO_0600 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DNO_1071 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DNO_1294 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D DNO_1073 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:dno00240]
D DNO_0490 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DNO_0657 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DNO_0669 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D DNO_0919 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DNO_0564 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DNO_0721 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DNO_0492 maf-1; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DNO_0360 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DNO_0112 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DNO_0959 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DNO_0586 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DNO_0910 nrdD; ribonucleoside reductase family protein, class III K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DNO_0507 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D DNO_0607 nrdA; ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNO_0608 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DNO_1213 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DNO_0824 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DNO_0908 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D DNO_0569 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DNO_0503 short chain dehydrogenase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dno00250]
D DNO_0393 L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DNO_0874 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D DNO_0600 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DNO_0667 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DNO_0490 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DNO_0528 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DNO_0088 purF; amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNO_0185 vrlG; glutamine amidotransferase domain protein VrlG K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dno00260]
D DNO_0285 aspartate kinase family protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNO_1053 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNO_0476 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNO_0848 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DNO_0706 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNO_0670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DNO_1015 conserved hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DNO_0503 short chain dehydrogenase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D DNO_1069 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DNO_1197 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_1070 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D DNO_0565 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DNO_0619 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DNO_0323 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:dno00270]
D DNO_0971 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DNO_0624 pfs; MTA-SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DNO_0942 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DNO_0395 luxS; autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D DNO_0285 aspartate kinase family protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNO_1053 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNO_1217 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DNO_1218 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DNO_0619 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DNO_0670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:dno00280]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_0799 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
D DNO_0323 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00300 Lysine biosynthesis [PATH:dno00300]
D DNO_0285 aspartate kinase family protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNO_1053 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNO_1114 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DNO_0561 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DNO_0817 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DNO_0042 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DNO_0986 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelat e ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DNO_0985 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:dno00310]
D DNO_0331 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_0590 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:dno00220]
D DNO_1074 argF-1; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DNO_1335 argF-2; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DNO_1075 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D DNO_1073 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:dno00330]
D DNO_0014 ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D DNO_0653 glutamine amidotransferase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D DNO_0674 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D DNO_0442 tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D DNO_0331 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dno00400]
D DNO_1003 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DNO_1084 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DNO_0419 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DNO_0509 aroE; shhikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D DNO_0611 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DNO_0111 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DNO_1072 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DNO_0585 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:dno00430]
D DNO_0448 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DNO_0447 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:dno00450]
D DNO_0834 sufS; cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DNO_0934 metG; methionyl-trna synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:dno00460]
D DNO_0393 L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DNO_0476 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dno00470]
D DNO_0325 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DNO_0979 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNO_0005 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DNO_0983 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DNO_0042 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:dno00480]
D DNO_1217 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DNO_1218 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DNO_1151 leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DNO_0019 aminopeptidase, M1 family K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DNO_0049 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D DNO_0013 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D DNO_0086 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DNO_1236 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DNO_1223 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNO_0014 ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:dno00540]
D DNO_0685 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DNO_0975 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DNO_0683 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DNO_0211 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DNO_0686 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DNO_0843 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DNO_0536 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DNO_0361 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DNO_0304 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DNO_1296 kdtA; 3-Deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DNO_0998 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DNO_0530 sulfatase domain protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DNO_0290 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNO_0095 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D DNO_1059 hydrolase, HAD-superfamily K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DNO_1031 heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DNO_0791 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dno00541]
D DNO_0327 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNO_0941 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNO_0338 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DNO_0907 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DNO_1140 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:dno00550]
D DNO_0853 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DNO_0436 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DNO_0980 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DNO_0983 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DNO_0986 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelat e ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DNO_0979 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNO_0985 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DNO_0719 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DNO_0291 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNO_0984 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DNO_0981 murG; N-acetylglucosaminyltransferase, MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DNO_0570 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D DNO_0964 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DNO_0987 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DNO_0899 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DNO_0129 dacB; D-alanyl-D-alanine carboxypeptidase C, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:dno00552]
D DNO_0291 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dno00730]
D DNO_1196 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNO_0932 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D DNO_0649 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DNO_0105 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DNO_0090 thiamine pyrophosphokinase family protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D DNO_1071 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:dno00740]
D DNO_0472 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DNO_0474 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DNO_0471 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DNO_0473 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DNO_0082 ribF; riboflavin kinase RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DNO_0932 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D DNO_0957 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:dno00750]
D DNO_1023 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D DNO_0929 pdxK; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D DNO_0670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dno00760]
D DNO_0196 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DNO_0699 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DNO_0959 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DNO_0139 NUDIX hydrolase domain protein K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D DNO_0197 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DNO_1032 NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D DNO_1062 ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:dno00770]
D DNO_0542 bvg accessory factor family protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DNO_0823 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DNO_1005 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DNO_1122 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DNO_0905 4'-phosphopantetheinyl transferase superfamily domain protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
C 00780 Biotin metabolism [PATH:dno00780]
D DNO_0315 fabB; beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DNO_1211 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNO_1209 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0531 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0684 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DNO_0074 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DNO_0541 birA; biotin-acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:dno00785]
D DNO_0897 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DNO_0480 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_0544 aceE; pyruvate dehydrogenase e1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DNO_0545 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNO_0329 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DNO_0331 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DNO_1069 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DNO_1197 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNO_1070 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:dno00790]
D DNO_1248 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D DNO_0105 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DNO_1076 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DNO_0117 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DNO_1237 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DNO_0789 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DNO_0404 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DNO_0472 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DNO_1127 para-aminobenzoate synthetase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D DNO_0646 chorismate binding family protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D DNO_0818 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:dno00670]
D DNO_0789 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DNO_1298 folD; methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DNO_0476 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNO_0207 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DNO_0918 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DNO_0157 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DNO_1197 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNO_0569 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DNO_0863 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DNO_1022 methylenetetrahydrofolate reductase family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DNO_1201 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dno00860]
D DNO_0734 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNO_0069 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DNO_1024 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DNO_0510 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DNO_0299 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DNO_0298 hemD; uroporphyrinogen-III synthase family protein HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D DNO_1332 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DNO_0087 hemN-1; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DNO_0458 flavodoxin family protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D DNO_1249 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DNO_1344 phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dno00130]
D DNO_0397 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DNO_0538 ubiG; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D DNO_0439 ubiE; ubiquinone-menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DNO_0709 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dno00900]
D DNO_0799 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D DNO_0797 hydroxymethylglutaryl-coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D DNO_0489 GHMP kinase family protein K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D DNO_0800 GHMP kinase family protein K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D DNO_0504 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D DNO_0798 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D DNO_0648 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D DNO_0945 polyprenyl synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DNO_0719 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DNO_1035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D DNO_0926 chorismate mutase family protein K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D DNO_1203 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:dno00261]
D DNO_0285 aspartate kinase family protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNO_1053 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNO_1114 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DNO_0561 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D DNO_0803 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D DNO_1208 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DNO_1209 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0531 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0074 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DNO_1210 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:dno00999]
D DNO_0971 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DNO_0509 aroE; shhikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:dno00362]
D DNO_0582 hydrolase, alpha-beta fold family protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D DNO_1136 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dno03020]
D DNO_1282 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DNO_1281 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DNO_1251 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DNO_1021 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dno03010]
D DNO_0113 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DNO_0723 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DNO_1269 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DNO_1252 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DNO_1258 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DNO_1121 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DNO_1279 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DNO_1261 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DNO_1130 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DNO_1276 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DNO_1253 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DNO_1280 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DNO_1254 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DNO_1262 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DNO_1048 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DNO_1007 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DNO_1266 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DNO_1120 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DNO_1271 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DNO_1025 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DNO_1081 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DNO_1285 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DNO_1272 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DNO_1275 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DNO_1274 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DNO_1263 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DNO_1260 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DNO_1283 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DNO_1119 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DNO_1284 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DNO_1286 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DNO_1129 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DNO_1265 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DNO_1256 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DNO_1268 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DNO_1250 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DNO_1259 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DNO_1010 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DNO_0524 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DNO_0486 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DNO_1270 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DNO_1273 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DNO_1264 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DNO_0064 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DNO_0487 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DNO_0060 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DNO_1267 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DNO_1257 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DNO_0417 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DNO_1205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DNO_0061 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DNO_0952 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DNO_0525 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DNO_0887 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_1309 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_1235 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_0884 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_1232 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_1306 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_0883 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_1231 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_1305 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dno00970]
D DNO_0733 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_0885 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_1307 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_1233 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_0793 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_1087 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_0946 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DNO_0947 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DNO_0410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DNO_0411 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DNO_1220 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DNO_0066 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DNO_0731 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DNO_0732 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DNO_1292 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DNO_1221 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DNO_0056 tRNA-His K14226 tRNA-His; tRNA His
D DNO_0886 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DNO_1234 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DNO_1308 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DNO_1193 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0231 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0812 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_1090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0846 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DNO_0845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DNO_0165 tRNA-Met K14230 tRNA-Met; tRNA Met
D DNO_0613 tRNA-Met K14230 tRNA-Met; tRNA Met
D DNO_0032 tRNA-Met K14230 tRNA-Met; tRNA Met
D DNO_0059 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DNO_0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DNO_0054 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DNO_0943 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DNO_0283 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DNO_0463 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DNO_1046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DNO_1291 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DNO_1089 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DNO_1289 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DNO_1293 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DNO_0233 tRNA-Val K14237 tRNA-Val; tRNA Val
D DNO_0409 tRNA-Val K14237 tRNA-Val; tRNA Val
D DNO_0734 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNO_0969 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DNO_0349 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DNO_0968 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DNO_1108 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DNO_0286 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DNO_1118 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNO_0701 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DNO_0702 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DNO_0527 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DNO_1065 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DNO_0208 cysS; cysteinyl-tRNA synthetase class I K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DNO_0934 metG; methionyl-trna synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DNO_0157 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DNO_0351 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DNO_0246 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNO_0083 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DNO_0938 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DNO_1051 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNO_1137 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DNO_0517 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DNO_1055 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DNO_1056 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DNO_1321 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNO_0236 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dno03060]
D DNO_1255 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DNO_1288 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DNO_0813 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DNO_0039 secD; preprotein translocase, SecD subunit K03072 secD; preprotein translocase subunit SecD
D DNO_0038 secF; preprotein translocase, SecF subunit K03074 secF; preprotein translocase subunit SecF
D DNO_0040 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DNO_0949 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNO_0973 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNO_0292 secB; protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DNO_0428 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNO_0875 ftsY; signal recognition particle FtsY K03110 ftsY; fused signal recognition particle receptor
D DNO_0449 sec-independent protein translocase family protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNO_0450 sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D DNO_0451 tatC; sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DNO_0693 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DNO_0084 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dno04122]
D DNO_1196 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNO_0627 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:dno03018]
D DNO_0658 NUDIX hydrolase domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DNO_0302 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D DNO_0865 ATP-dependent rna helicase Rhl K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D DNO_0362 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNO_1047 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DNO_0601 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DNO_0736 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DNO_0826 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNO_1339 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNO_0595 hfq; Hfq RNA-binding protein K03666 hfq; host factor-I protein
D DNO_1106 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DNO_0116 pcnB; poly(A) polymerase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dno03030]
D DNO_0906 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DNO_0688 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNO_0955 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNO_1214 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNO_0244 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNO_0457 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DNO_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNO_0324 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DNO_1079 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DNO_0126 ssb-1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0767 ssb-2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_1102 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DNO_0687 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DNO_0206 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNO_0389 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dno03410]
D DNO_0548 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNO_0631 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DNO_0647 mutY; A-G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DNO_1135 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DNO_0917 xth-2; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DNO_0431 xth-1; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DNO_0206 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNO_0592 recJ; DNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNO_0389 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dno03420]
D DNO_0689 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DNO_0076 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D DNO_0558 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D DNO_0305 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DNO_0164 uvrD-1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DNO_0206 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNO_0389 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:dno03430]
D DNO_1303 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DNO_1116 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DNO_0164 uvrD-1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DNO_0592 recJ; DNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNO_0126 ssb-1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0767 ssb-2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0688 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNO_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNO_0955 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNO_0244 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNO_1214 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNO_0906 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DNO_0457 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DNO_0389 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNO_1161 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:dno03440]
D DNO_0592 recJ; DNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNO_0126 ssb-1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0767 ssb-2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0202 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D DNO_1128 recO; hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D DNO_0953 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DNO_0288 recA; DNA recombination protein RecA K03553 recA; recombination protein RecA
D DNO_0206 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNO_1177 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DNO_1176 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DNO_1178 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DNO_1018 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DNO_1165 recB; exonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DNO_0251 recC; Exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DNO_0408 recD; exonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DNO_0688 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNO_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNO_0955 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNO_0244 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNO_1214 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNO_0906 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DNO_0457 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DNO_0356 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dno02010]
D DNO_0255 conserved hypothetical protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D DNO_0256 ABC transporter domain protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D DNO_0257 ABC transporter domain protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D DNO_0856 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DNO_0857 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DNO_0858 conserved hypothetical membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DNO_0855 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D DNO_0859 ABC transporter family ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DNO_1180 pstS; phosphate binding family protein K02040 pstS; phosphate transport system substrate-binding protein
D DNO_1181 ABC-type phosphate-dependent transport system family protein K02037 pstC; phosphate transport system permease protein
D DNO_1182 ABC-type phosphate-dependent transport system family protein K02038 pstA; phosphate transport system permease protein
D DNO_1183 pstB; ABC-type phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DNO_0452 oligopeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DNO_0454 ABC transporter family protein K15581 oppB; oligopeptide transport system permease protein
D DNO_0455 ABC transporter family protein K15582 oppC; oligopeptide transport system permease protein
D DNO_0456 ABC transporter domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DNO_0889 znuA; high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D DNO_0354 zinc uptake system protein K09816 znuB; zinc transport system permease protein
D DNO_0355 zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DNO_0644 yfeA; periplasmic iron-binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein
D DNO_0642 yfeC; ABC iron transporter YfeC K11605 sitC; manganese/iron transport system permease protein
D DNO_0640 yfeD; ABC iron transporter permease YfeD K11606 sitD; manganese/iron transport system permease protein
D DNO_0643 yfeB; ABC iron transporter ATP-binding protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D DNO_0135 conserved hypothetical protein K10094 cbiK; nickel transport protein
D DNO_1162 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D DNO_0335 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNO_1228 ABC-type lipoprotein releasing system protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D DNO_1229 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DNO_1152 conserved hypothetical membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D DNO_1153 conserved hypothetical membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D DNO_0533 ABC transporter family ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DNO_0444 ABC transporter domain protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DNO_0443 ABC transporter domain protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DNO_0094 ABC transporter family protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DNO_0364 ABC transporter domain protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DNO_0547 ABC transporter family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DNO_0101 cydC; ABC-type transporter involved in cytochrome bd biosynthesis K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D DNO_0102 cydD; ABC-type transporter involved in cytochrome bd biosynthesis K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D DNO_0872 macrolide-specific ABC-type efflux carrier protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:dno02060]
D DNO_0118 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DNO_0119 PTS phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D DNO_0703 PTS system, fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D DNO_0610 PTS system, fructose IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D DNO_0583 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:dno03070]
D DNO_0039 secD; preprotein translocase, SecD subunit K03072 secD; preprotein translocase subunit SecD
D DNO_0038 secF; preprotein translocase, SecF subunit K03074 secF; preprotein translocase subunit SecF
D DNO_1288 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DNO_0813 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DNO_1255 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DNO_0040 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DNO_0949 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNO_0973 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNO_0875 ftsY; signal recognition particle FtsY K03110 ftsY; fused signal recognition particle receptor
D DNO_0292 secB; protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DNO_0428 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNO_0449 sec-independent protein translocase family protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNO_0450 sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D DNO_0451 tatC; sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dno02020]
D DNO_0819 two-component phosphate sensor PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DNO_0903 two component phosphate response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DNO_0105 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DNO_1180 pstS; phosphate binding family protein K02040 pstS; phosphate transport system substrate-binding protein
D DNO_0902 degQ; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D DNO_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DNO_0711 anaerobic c4-dicarboxylate membrane transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D DNO_1026 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNO_1027 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNO_1028 frdC; fumarate reductase, subunit C K00246 frdC; succinate dehydrogenase subunit C
D DNO_1029 fumarate reductase, subunit D K00247 frdD; succinate dehydrogenase subunit D
D DNO_0284 glpA; carbon storage regulator K03563 csrA; carbon storage regulator
D DNO_0160 ntrY; histidine kinase, NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DNO_0161 ntrX; response regulator, NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DNO_0434 pilS; two-componenent sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNO_0435 pilR; two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D DNO_0532 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DNO_0110 fimA; fimbrial subunit FimA K02650 pilA; type IV pilus assembly protein PilA
D DNO_0869 two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNO_0868 two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNO_1094 pilJ; twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D DNO_1095 hypothetical protein K02659 pilI; twitching motility protein PilI
D DNO_1093 chpA; chemotaxis protein ChpA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D DNO_1097 pilG; twitching motility regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D DNO_1096 pilH; twitching motility regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D DNO_0100 cydA; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNO_0099 cydB; cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DNO_0098 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D DNO_0014 ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dno02024]
D DNO_0395 luxS; autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D DNO_0595 hfq; Hfq RNA-binding protein K03666 hfq; host factor-I protein
D DNO_1003 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DNO_0334 potential RTX family protein K20276 bapA; large repetitive protein
D DNO_1002 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNO_0707 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DNO_0474 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DNO_1192 outer membrane multidrug efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D DNO_0452 oligopeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DNO_0454 ABC transporter family protein K15581 oppB; oligopeptide transport system permease protein
D DNO_0455 ABC transporter family protein K15582 oppC; oligopeptide transport system permease protein
D DNO_0456 ABC transporter domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DNO_0949 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNO_0603 aprV5; acidic extracellular subtilisin-like protease precursor AprV5 K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_1167 aprV2; acidic extracellular subtilisin-like protease AprV2 K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_0605 bprV; basic extracellular subtilisin-like protease precursor BprV K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_1288 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DNO_0813 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DNO_1255 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DNO_0040 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DNO_0973 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNO_0875 ftsY; signal recognition particle FtsY K03110 ftsY; fused signal recognition particle receptor
D DNO_0292 secB; protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DNO_0428 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:dno02030]
D DNO_0869 two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNO_0868 two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNO_0867 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
C 02040 Flagellar assembly [PATH:dno02040]
D DNO_1078 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DNO_0532 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DNO_0362 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:dno01501]
D DNO_1314 AmpG family permaese K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DNO_0021 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DNO_0452 oligopeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DNO_0454 ABC transporter family protein K15581 oppB; oligopeptide transport system permease protein
D DNO_0455 ABC transporter family protein K15582 oppC; oligopeptide transport system permease protein
D DNO_0456 ABC transporter domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DNO_1203 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D DNO_1190 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNO_1191 acrF; mutidrug efflux protein K18138 acrB; multidrug efflux pump
D DNO_1192 outer membrane multidrug efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D DNO_0964 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DNO_0987 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:dno01502]
D DNO_0979 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNO_0325 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DNO_0985 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DNO_0984 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DNO_0981 murG; N-acetylglucosaminyltransferase, MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dno01503]
D DNO_0530 sulfatase domain protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DNO_0235 calcium binding domain protein K01406 prtC; serralysin [EC:3.4.24.40]
D DNO_0311 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNO_0902 degQ; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D DNO_0511 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DNO_1190 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNO_1191 acrF; mutidrug efflux protein K18138 acrB; multidrug efflux pump
D DNO_0685 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dno01000]
C 01001 Protein kinases [BR:dno01001]
D DNO_0819 two-component phosphate sensor PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DNO_0160 ntrY; histidine kinase, NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DNO_0434 pilS; two-componenent sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNO_0869 two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNO_1093 chpA; chemotaxis protein ChpA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
C 01009 Protein phosphatases and associated proteins [BR:dno01009]
D DNO_1015 conserved hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:dno01002]
D DNO_0084 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DNO_1124 fimP; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DNO_0380 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DNO_0653 glutamine amidotransferase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D DNO_0088 purF; amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNO_0185 vrlG; glutamine amidotransferase domain protein VrlG K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNO_0528 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DNO_0400 conserved hypothetical protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D DNO_0944 hypothetical protein K08659 pepDA; dipeptidase [EC:3.4.-.-]
D DNO_0352 peptidase family U34 protein K08659 pepDA; dipeptidase [EC:3.4.-.-]
D DNO_0937 conserved hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D DNO_0313 conserved hypothetical lipoprotein K21470 ycbB; L,D-transpeptidase YcbB
D DNO_0019 aminopeptidase, M1 family K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DNO_0242 oligopeptidase, M3 family K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D DNO_1351 dcpA; peptidyl-dipeptidase I K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D DNO_1352 dcpB; peptidyl-dipeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D DNO_0235 calcium binding domain protein K01406 prtC; serralysin [EC:3.4.24.40]
D DNO_1151 leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DNO_0073 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D DNO_0697 peptidase M20 family K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D DNO_0201 pepT-1; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D DNO_1350 pepT-2; aminotripeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D DNO_0049 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D DNO_0013 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D DNO_1322 M23peptidase domain protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D DNO_0724 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DNO_0429 xaa-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DNO_1238 ftsH; ATP-dependent protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DNO_0716 membrane-associated zinc metalloprotease, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DNO_0902 degQ; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D DNO_0603 aprV5; acidic extracellular subtilisin-like protease precursor AprV5 K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_1167 aprV2; acidic extracellular subtilisin-like protease AprV2 K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_0605 bprV; basic extracellular subtilisin-like protease precursor BprV K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_1338 ptrB; prolyl oligopeptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D DNO_0899 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DNO_0129 dacB; D-alanyl-D-alanine carboxypeptidase C, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DNO_0229 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DNO_0227 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DNO_0693 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DNO_1034 carboxyl-terminal protease family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DNO_0543 carboxyl-terminal protease family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DNO_0999 peptidase SspA family K04773 sppA; protease IV [EC:3.4.21.-]
D DNO_0048 S49 family peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D DNO_1330 GlpG-like proten K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D DNO_1346 hslV; heat shock protein HslVU, protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DNO_0394 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DNO_0578 PmbA protein K03592 pmbA; PmbA protein
D DNO_0577 tldD; TldD protein K03568 tldD; TldD protein
D DNO_0598 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D DNO_0597 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:dno01003]
D DNO_0570 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D DNO_0626 mdoH; glycosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dno01005]
D DNO_0685 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DNO_0686 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DNO_0975 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DNO_0683 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DNO_0211 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DNO_0843 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DNO_0998 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DNO_1296 kdtA; 3-Deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DNO_0530 sulfatase domain protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DNO_0361 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DNO_0304 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DNO_0536 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DNO_1031 heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DNO_0791 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D DNO_0290 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNO_1059 hydrolase, HAD-superfamily K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DNO_0095 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dno01011]
D DNO_0853 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DNO_0436 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DNO_0980 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DNO_0983 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DNO_0986 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelat e ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DNO_0979 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNO_0325 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DNO_0005 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DNO_0984 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DNO_0981 murG; N-acetylglucosaminyltransferase, MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DNO_0291 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNO_0862 mviN; virulence factor MviN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D DNO_0570 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D DNO_0964 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DNO_0987 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DNO_0899 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DNO_0129 dacB; D-alanyl-D-alanine carboxypeptidase C, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DNO_0937 conserved hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D DNO_0313 conserved hypothetical lipoprotein K21470 ycbB; L,D-transpeptidase YcbB
D DNO_1322 M23peptidase domain protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D DNO_0633 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DNO_0962 membrane-bound lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DNO_1086 lytic murein transglycosylase family protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DNO_1212 aminodeoxychorismate lyase family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DNO_0961 rare lipoprotein A domain protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DNO_0311 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNO_1202 ampD; N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:dno01004]
D DNO_1208 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DNO_1207 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DNO_0315 fabB; beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DNO_1211 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNO_1209 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0531 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNO_0314 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D DNO_0684 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DNO_0074 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DNO_0830 acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D DNO_1002 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNO_1206 plsX; fatty acid-phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DNO_1077 conserved hypothetical membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DNO_1058 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DNO_0225 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:dno01006]
D DNO_0648 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D DNO_0945 polyprenyl synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DNO_0719 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DNO_1117 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DNO_0709 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DNO_0397 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:dno01007]
D DNO_0734 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNO_1108 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DNO_1321 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNO_0236 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DNO_0208 cysS; cysteinyl-tRNA synthetase class I K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DNO_1051 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNO_0934 metG; methionyl-trna synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DNO_0083 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DNO_0351 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DNO_0246 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNO_0938 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DNO_1118 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNO_0517 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DNO_0701 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DNO_0702 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DNO_1065 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DNO_1137 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DNO_0527 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DNO_0286 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DNO_1055 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DNO_1056 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DNO_1024 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DNO_0646 chorismate binding family protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D DNO_0670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:dno00194]
D DNO_1141 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DNO_1142 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DNO_1143 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DNO_1144 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DNO_1145 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DNO_1146 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DNO_1147 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DNO_1148 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dno03000]
D DNO_0142 probable OxrR-like transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DNO_1189 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D DNO_0469 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DNO_0877 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DNO_0707 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DNO_0541 birA; biotin-acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DNO_1149 partioning protein, ParB/SpoJ family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNO_0353 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DNO_0475 nrdR; conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:dno03021]
D DNO_1251 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DNO_1282 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DNO_1281 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DNO_1021 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DNO_1078 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DNO_0876 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D DNO_0532 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DNO_0030 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D DNO_0470 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DNO_1287 nusG; transcription termination-antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DNO_0851 stringent starvation protein A K03599 sspA; stringent starvation protein A
D DNO_0850 stringent starvation protein B K03600 sspB; stringent starvation protein B
D DNO_0353 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DNO_1184 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D DNO_0736 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dno03019]
D DNO_0302 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D DNO_0493 rng; ribonuclease g K08301 rng; ribonuclease G [EC:3.1.26.-]
D DNO_0692 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DNO_0601 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DNO_0904 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DNO_0865 ATP-dependent rna helicase Rhl K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D DNO_0362 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNO_1047 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DNO_0736 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DNO_0826 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNO_1339 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNO_0595 hfq; Hfq RNA-binding protein K03666 hfq; host factor-I protein
D DNO_1106 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DNO_0116 pcnB; poly(A) polymerase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DNO_0658 NUDIX hydrolase domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DNO_0284 glpA; carbon storage regulator K03563 csrA; carbon storage regulator
D DNO_0399 ATP-binding family protein K06958 rapZ; RNase adapter protein RapZ
D DNO_0622 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:dno03011]
D DNO_0113 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DNO_0723 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DNO_1269 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DNO_1252 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DNO_1258 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DNO_1121 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DNO_1279 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DNO_1261 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DNO_1130 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DNO_1276 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DNO_1253 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DNO_1280 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DNO_1254 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DNO_1262 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DNO_1048 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DNO_1007 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DNO_1266 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DNO_1120 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DNO_1271 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DNO_1025 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DNO_1081 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DNO_1285 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DNO_1272 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DNO_1275 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DNO_1274 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DNO_1263 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DNO_1260 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DNO_1119 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DNO_1284 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DNO_1286 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DNO_1283 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DNO_1129 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DNO_1265 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DNO_1256 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DNO_1268 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DNO_1250 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DNO_1259 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DNO_1010 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DNO_0524 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DNO_0486 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DNO_1270 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DNO_1273 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DNO_1264 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DNO_0487 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DNO_0060 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DNO_1267 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DNO_1257 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DNO_0417 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DNO_1205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DNO_0061 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DNO_0952 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DNO_0525 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DNO_0064 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DNO_0883 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_1231 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_1305 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_0887 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_1309 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_1235 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_0884 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_1232 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_1306 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dno03009]
D DNO_0692 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DNO_0904 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DNO_0691 era; GTP-binding protein Era K03595 era; GTPase
D DNO_0576 conserved hypothetical protein K03595 era; GTPase
D DNO_0488 GTP binding domain protein K03979 obgE; GTPase [EC:3.6.5.-]
D DNO_0353 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DNO_0030 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D DNO_0470 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DNO_1287 nusG; transcription termination-antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DNO_0922 ksgA; rRNA adenine dimethylase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DNO_0158 rsmB; rRNA SAM-dependent methyltransferase, Fmu K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DNO_1004 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DNO_0433 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DNO_1150 gidB; glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DNO_0989 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DNO_0641 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DNO_0089 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D DNO_0602 trmH; RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DNO_1239 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DNO_0935 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DNO_0253 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D DNO_1316 RNA methylase family protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D DNO_0514 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DNO_1083 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DNO_0294 rluA; ribosomal large subunit pseudouridine synthase, RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DNO_0479 rluB; ribosomal large subunit pseudouridine synthase, RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DNO_1001 rluC; ribosomal large subunit pseudouridine synthase, RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DNO_1311 rluD; ribosomal large subunit pseudouridine synthase, RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DNO_0584 rluE; ribosomal large subunit pseudouridine synthase, RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D DNO_0933 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DNO_1008 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D DNO_0422 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DNO_0652 modification methylase, HemK family K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D DNO_0302 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D DNO_0493 rng; ribonuclease g K08301 rng; ribonuclease G [EC:3.1.26.-]
D DNO_1098 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DNO_0649 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DNO_0520 engA; GTP-binding family protein K03977 engA; GTPase
D DNO_0596 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D DNO_0343 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DNO_1020 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DNO_0028 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DNO_0031 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D DNO_0467 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D DNO_1243 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D DNO_1240 YhbY family protein K07574 yhbY; RNA-binding protein
D DNO_0130 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D DNO_0614 yfiA; sigma-54 modulation protein/S30EA ribosomal family protein K05808 hpf; ribosome hibernation promoting factor
D DNO_1325 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D DNO_1204 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:dno03016]
D DNO_1060 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DNO_0734 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNO_1137 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DNO_0083 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DNO_0246 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNO_0934 metG; methionyl-trna synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DNO_1108 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DNO_1051 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNO_0938 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DNO_1118 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNO_0286 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DNO_0527 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DNO_1065 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DNO_0208 cysS; cysteinyl-tRNA synthetase class I K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DNO_0351 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DNO_0517 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DNO_1055 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DNO_1056 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DNO_1321 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNO_0236 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DNO_0491 dtd; D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DNO_1299 histidine triad (HIT) domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DNO_1247 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DNO_0027 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DNO_1134 pseudouridine synthase, TruD family K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D DNO_1196 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNO_0343 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DNO_1117 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DNO_0948 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DNO_0672 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DNO_1011 cysQ; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DNO_0951 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DNO_0307 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D DNO_0664 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DNO_1123 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D DNO_0398 ABC transporter family ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D DNO_0701 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DNO_0702 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DNO_0579 tadA; adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DNO_1052 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D DNO_0423 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DNO_1245 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DNO_0481 methyltransferase family protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D DNO_0482 methyltransferase family protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D DNO_0661 S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D DNO_1163 trmA; tRNA (uracil-5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D DNO_1009 trmD; tRNA (guanine-N1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DNO_0708 rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DNO_0294 rluA; ribosomal large subunit pseudouridine synthase, RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DNO_0627 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DNO_1088 adenine nucleotide alpha hydrolase ATP-binding family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DNO_0240 conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D DNO_0026 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DNO_0818 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DNO_0317 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D DNO_0319 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DNO_0359 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DNO_1061 conserved hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D DNO_0573 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DNO_0018 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DNO_0149 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DNO_0416 ThiF family domain protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D DNO_0601 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DNO_1047 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DNO_1042 vapC2; virulence-associated protein VapC2 K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DNO_0277 vapC1; virulence-associated protein VapC1 K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:dno03012]
D DNO_0029 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DNO_0970 ABC transporter family ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DNO_0722 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D DNO_1277 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DNO_1278 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DNO_0071 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DNO_0720 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D DNO_0072 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DNO_0063 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DNO_1198 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DNO_1326 efp; translation elongation factor P K02356 efp; elongation factor P
D DNO_0604 lysyl-RNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D DNO_0939 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DNO_0501 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:dno03110]
D DNO_0655 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D DNO_0108 clpB; ATP-dependent protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DNO_0228 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DNO_1347 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DNO_0826 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNO_1339 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNO_0827 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DNO_0825 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D DNO_0912 hslR; ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D DNO_1340 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D DNO_0902 degQ; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D DNO_1238 ftsH; ATP-dependent protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DNO_1148 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DNO_0292 secB; protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DNO_0603 aprV5; acidic extracellular subtilisin-like protease precursor AprV5 K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_1167 aprV2; acidic extracellular subtilisin-like protease AprV2 K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_0605 bprV; basic extracellular subtilisin-like protease precursor BprV K14645 K14645; serine protease [EC:3.4.21.-]
D DNO_0210 peptidylprolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DNO_0209 peptidylprolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DNO_0916 peptidylprolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DNO_0012 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D DNO_0921 PpiC-type peptidylprolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DNO_0737 trxA; thioredoxin I K03671 TXN; thioredoxin
D DNO_1301 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D DNO_0511 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DNO_0666 dsbB; thiol:disulfide interchange protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D DNO_1317 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DNO_0924 dsbG; protein disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DNO_0418 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:dno04131]
D DNO_0580 lipoprotein, putative K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D DNO_0092 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNO_0706 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNO_1200 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:dno03032]
D DNO_1102 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DNO_0226 DNA-binding protein Hu K03530 hupB; DNA-binding protein HU-beta
D DNO_1057 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DNO_0114 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DNO_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DNO_0324 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DNO_0776 dnaC; DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D DNO_1079 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DNO_0126 ssb-1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0767 ssb-2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0688 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNO_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNO_0457 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DNO_0244 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNO_1214 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNO_0906 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DNO_0955 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNO_0687 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DNO_0206 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNO_0389 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNO_1161 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DNO_0321 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DNO_0612 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DNO_0678 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DNO_0677 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DNO_0152 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dno03036]
D DNO_0692 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DNO_1300 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
D DNO_0226 DNA-binding protein Hu K03530 hupB; DNA-binding protein HU-beta
D DNO_1057 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DNO_0114 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DNO_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DNO_1318 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D DNO_0595 hfq; Hfq RNA-binding protein K03666 hfq; host factor-I protein
D DNO_0469 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DNO_0609 chromosome segregation SMC family protein K03529 smc; chromosome segregation protein
D DNO_0477 scpA; conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D DNO_0478 conserved hypothetical protein K06024 scpB; segregation and condensation protein B
D DNO_0977 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DNO_0363 Septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D DNO_0987 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DNO_0483 ftsK; cell division protein, FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DNO_0988 hypothetical protein K03586 ftsL; cell division protein FtsL
D DNO_0403 conserved hypothetical protein K03591 ftsN; cell division protein FtsN
D DNO_0978 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D DNO_0982 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DNO_0976 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DNO_0390 hypothetical protein K03528 zipA; cell division protein ZipA
D DNO_0713 hypothetical protein K09888 zapA; cell division protein ZapA
D DNO_0301 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D DNO_0311 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNO_1190 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNO_0915 minC; septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D DNO_0914 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DNO_0913 septum formation topological specificity factor MinE superfamily protein K03608 minE; cell division topological specificity factor
D DNO_0967 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DNO_0966 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DNO_0965 hypothetical membrane protein K03571 mreD; rod shape-determining protein MreD
D DNO_0963 rodA; rod shape determining protein K05837 rodA; rod shape determining protein RodA
D DNO_1149 partioning protein, ParB/SpoJ family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNO_0678 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DNO_0677 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DNO_0672 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DNO_1150 gidB; glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DNO_0041 xerC; site-specific recombinase XerC K03733 xerC; integrase/recombinase XerC
D DNO_1131 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DNO_0508 ATPase family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNO_0391 GTPase K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:dno03400]
D DNO_0631 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DNO_0647 mutY; A-G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DNO_0548 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNO_0972 NUDIX hydrolase domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DNO_0824 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DNO_1135 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DNO_0917 xth-2; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DNO_0431 xth-1; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DNO_0592 recJ; DNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNO_0389 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNO_0206 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNO_0076 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D DNO_0558 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D DNO_0305 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DNO_0164 uvrD-1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DNO_1282 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DNO_1281 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DNO_1251 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DNO_1021 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DNO_0689 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DNO_1303 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DNO_1116 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DNO_0688 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNO_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNO_0457 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DNO_0244 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNO_1214 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNO_0906 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DNO_0955 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNO_0126 ssb-1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0767 ssb-2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_1161 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DNO_1165 recB; exonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DNO_0251 recC; Exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DNO_0408 recD; exonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DNO_0288 recA; DNA recombination protein RecA K03553 recA; recombination protein RecA
D DNO_1177 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DNO_1176 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DNO_1178 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DNO_0780 endodeoxyribonuclease RusA family K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D DNO_0356 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DNO_0366 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D DNO_0365 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D DNO_0326 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DNO_0202 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D DNO_1018 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DNO_1128 recO; hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D DNO_0953 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DNO_1063 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DNO_0321 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DNO_0612 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DNO_0152 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DNO_0226 DNA-binding protein Hu K03530 hupB; DNA-binding protein HU-beta
D DNO_1057 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DNO_0114 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DNO_1300 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
D DNO_0287 recX; RecX family regulatory protein K03565 recX; regulatory protein
D DNO_0381 uvrD-2; DNA helicase UvrD K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D DNO_0572 helicase domain protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D DNO_0607 nrdA; ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNO_0608 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:dno03029]
D DNO_0029 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DNO_0722 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D DNO_1277 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DNO_1278 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DNO_0691 era; GTP-binding protein Era K03595 era; GTPase
D DNO_0576 conserved hypothetical protein K03595 era; GTPase
D DNO_1321 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNO_0246 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNO_1118 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNO_1051 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNO_0969 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DNO_0349 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DNO_0968 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DNO_0126 ssb-1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0767 ssb-2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DNO_0681 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D DNO_0826 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNO_0825 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D DNO_1339 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNO_1340 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D DNO_0827 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DNO_1196 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNO_1301 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D DNO_0508 ATPase family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNO_0949 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dno02000]
D DNO_0444 ABC transporter domain protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DNO_0443 ABC transporter domain protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DNO_0094 ABC transporter family protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DNO_0364 ABC transporter domain protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DNO_0547 ABC transporter family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DNO_0101 cydC; ABC-type transporter involved in cytochrome bd biosynthesis K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D DNO_0102 cydD; ABC-type transporter involved in cytochrome bd biosynthesis K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D DNO_0872 macrolide-specific ABC-type efflux carrier protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DNO_0730 ABC transporter family ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D DNO_0255 conserved hypothetical protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D DNO_0256 ABC transporter domain protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D DNO_0257 ABC transporter domain protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D DNO_0857 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DNO_0858 conserved hypothetical membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DNO_0859 ABC transporter family ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DNO_0856 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DNO_0855 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D DNO_1180 pstS; phosphate binding family protein K02040 pstS; phosphate transport system substrate-binding protein
D DNO_1181 ABC-type phosphate-dependent transport system family protein K02037 pstC; phosphate transport system permease protein
D DNO_1182 ABC-type phosphate-dependent transport system family protein K02038 pstA; phosphate transport system permease protein
D DNO_1183 pstB; ABC-type phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DNO_1343 Bacterial extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_1345 bacterial extracellular solute-binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0033 bacterial extracellular solute-binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0034 bacterial extracellular solute-binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0377 bacterial extracellular solute-binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0502 bacterial extracellular solute-binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0831 bacterial extracellular solute-binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0994 bacterial extracellular solute-binding fmaily protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0123 bacterial solute binding family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DNO_0452 oligopeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DNO_0454 ABC transporter family protein K15581 oppB; oligopeptide transport system permease protein
D DNO_0455 ABC transporter family protein K15582 oppC; oligopeptide transport system permease protein
D DNO_0456 ABC transporter domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DNO_0889 znuA; high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D DNO_0354 zinc uptake system protein K09816 znuB; zinc transport system permease protein
D DNO_0355 zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DNO_0644 yfeA; periplasmic iron-binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein
D DNO_0642 yfeC; ABC iron transporter YfeC K11605 sitC; manganese/iron transport system permease protein
D DNO_0640 yfeD; ABC iron transporter permease YfeD K11606 sitD; manganese/iron transport system permease protein
D DNO_0643 yfeB; ABC iron transporter ATP-binding protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D DNO_0135 conserved hypothetical protein K10094 cbiK; nickel transport protein
D DNO_1162 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D DNO_0335 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNO_1152 conserved hypothetical membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D DNO_1153 conserved hypothetical membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D DNO_0533 ABC transporter family ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DNO_1132 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D DNO_1228 ABC-type lipoprotein releasing system protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D DNO_1229 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DNO_0047 hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DNO_0046 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DNO_0836 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DNO_0787 multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump
D DNO_1314 AmpG family permaese K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DNO_0062 conserved hypothetical membrane protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D DNO_0118 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DNO_0119 PTS phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D DNO_0610 PTS system, fructose IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D DNO_0703 PTS system, fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D DNO_0214 glpF; major intrinsic protein superfamily, glycerol facilitator protein K02440 glpF; glycerol uptake facilitator
D DNO_0581 TrkA-N domain family protein K10716 kch; voltage-gated potassium channel
D DNO_0086 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DNO_0851 stringent starvation protein A K03599 sspA; stringent starvation protein A
D DNO_0499 conserved hypothetical membrane protein K19416 yccA; modulator of FtsH protease
D DNO_0880 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D DNO_0053 Mechanosensitive ion channel family K22044 ybiO; moderate conductance mechanosensitive channel
D DNO_0796 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D DNO_1175 tolQ; TolQ protein K03562 tolQ; biopolymer transport protein TolQ
D DNO_1174 tolR; TolR protein K03560 tolR; biopolymer transport protein TolR
D DNO_1324 camphor resistance (CrcB) family protein K06199 crcB; fluoride exporter
D DNO_0426 conserved hypothetical membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DNO_0141 conserved hypothetical membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DNO_0320 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DNO_0333 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DNO_0546 outer membrane efflux family protein K12543 lapE; outer membrane protein, adhesin transport system
D DNO_1192 outer membrane multidrug efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D DNO_0681 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D DNO_0519 quinonprotein alcohol dehydrogenase family protein K17713 bamB; outer membrane protein assembly factor BamB
D DNO_1115 conserved hypothetical lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D DNO_1310 comL; competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD
D DNO_1064 SmpA/OmlA family lipoprotein K06186 bamE; outer membrane protein assembly factor BamE
D DNO_0861 outer membrane protein K07278 tamA; translocation and assembly module TamA
D DNO_0860 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D DNO_0534 OstA-like family protein K09774 lptA; lipopolysaccharide export system protein LptA
D DNO_0535 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D DNO_0920 ostA; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D DNO_0245 hypothetical lipoprotein K03643 lptE; LPS-assembly lipoprotein
D DNO_0936 transporter associated domain protein K06189 corC; hemolysin (HlyC) family protein
D DNO_0015 Amino acid transporter superfamily K03756 potE; putrescine:ornithine antiporter
D DNO_0659 cation efflux family protein K13283 fieF; ferrous-iron efflux pump FieF
D DNO_1191 acrF; mutidrug efflux protein K18138 acrB; multidrug efflux pump
D DNO_0711 anaerobic c4-dicarboxylate membrane transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D DNO_1111 K+-dependent Na+-Ca+ exchanger related family protein K07301 yrbG; cation:H+ antiporter
D DNO_0816 nhaA; Na+-H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D DNO_1157 Sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D DNO_0662 Xanthine/uracil permease family protein K02824 uraA; uracil permease
D DNO_0728 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D DNO_1349 sdaC; serine transporter SdaC K03837 sdaC; serine transporter
D DNO_0107 conserved hypothetical membrane protein K26604 cyuP; cysteine uptake transport protein
D DNO_0396 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family
D DNO_0698 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D DNO_1353 dcuCA; C4-dicarboxylate anaerobic carrier, DcuC family protein K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D DNO_1354 dcuCB; C4-dicarboxylate anaerobic carrier, DcuC family protein K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D DNO_0862 mviN; virulence factor MviN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D DNO_0295 conserved hypothetical membrane protein K03548 perM; putative permease
D DNO_0820 conserved hypothetical membrane protein K09125 yhhQ; queuosine precursor transporter
D DNO_0849 MarC family membrane protein K05595 marC; multiple antibiotic resistance protein
D DNO_0982 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DNO_0580 lipoprotein, putative K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D DNO_1171 pal; OmpA domain protein K03640 pal; peptidoglycan-associated lipoprotein
D DNO_1173 tolA; TolA protein K03646 tolA; colicin import membrane protein
D DNO_1172 tolB; TolB protein K03641 tolB; TolB protein
D DNO_0549 type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D DNO_1190 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNO_0871 macrolide-specific ABC-type efflux protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D DNO_0136 feoA; iron transport protein FeoA K04758 feoA; ferrous iron transport protein A
D DNO_0137 feoB; ferrous iron transport protein FeoB K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:dno02044]
D DNO_0547 ABC transporter family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DNO_0549 type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D DNO_0546 outer membrane efflux family protein K12543 lapE; outer membrane protein, adhesin transport system
D DNO_1124 fimP; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DNO_0110 fimA; fimbrial subunit FimA K02650 pilA; type IV pilus assembly protein PilA
D DNO_1126 fimN; type IV fimbrial biogenesis nucleotide binding protein FimN K02652 pilB; type IV pilus assembly protein PilB
D DNO_1125 fimO; type IV fimbrial biogenesis protein FimO K02653 pilC; type IV pilus assembly protein PilC
D DNO_0890 type IV fimbrial biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
D DNO_0515 type 4 fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D DNO_1097 pilG; twitching motility regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D DNO_1096 pilH; twitching motility regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D DNO_1095 hypothetical protein K02659 pilI; twitching motility protein PilI
D DNO_1094 pilJ; twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D DNO_0344 pilM; type IV fimbrial biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DNO_0345 pilN; type IV fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D DNO_0346 pilO; type IV fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D DNO_0348 pilQ; type IV fimbrial pore PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DNO_0675 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DNO_0676 pilU; twitching motility protein PilU K02670 pilU; twitching motility protein PilU
D DNO_0894 pilV; conserved hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D DNO_0893 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D DNO_0895 pilC; type IV fimbrial tip adhesin K02674 pilY1; type IV pilus assembly protein PilY1
D DNO_1215 pilZ; type IV fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D DNO_0891 type IV fimbrial biogenesis protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D DNO_0712 fimV; type IV fimbrial biogenesis protein FimV K08086 fimV; pilus assembly protein FimV
D DNO_0673 conserved hypothetical protein K02221 yggT; YggT family protein
D DNO_0882 ComEA-related protein K02237 comEA; competence protein ComEA
D DNO_1304 competence protein ComEA-related protein K02237 comEA; competence protein ComEA
D DNO_1230 competence ComEA family protein K02237 comEA; competence protein ComEA
D DNO_0330 competence family protein K02238 comEC; competence protein ComEC
D DNO_1317 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DNO_0924 dsbG; protein disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DNO_0973 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNO_0292 secB; protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DNO_0039 secD; preprotein translocase, SecD subunit K03072 secD; preprotein translocase subunit SecD
D DNO_1288 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DNO_0038 secF; preprotein translocase, SecF subunit K03074 secF; preprotein translocase subunit SecF
D DNO_0813 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DNO_1255 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DNO_0428 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNO_0875 ftsY; signal recognition particle FtsY K03110 ftsY; fused signal recognition particle receptor
D DNO_0040 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DNO_0949 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNO_0449 sec-independent protein translocase family protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNO_0450 sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D DNO_0451 tatC; sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dno02042]
D DNO_0426 conserved hypothetical membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DNO_0141 conserved hypothetical membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:dno02022]
D DNO_0819 two-component phosphate sensor PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DNO_0903 two component phosphate response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DNO_0901 two-component copper resistance response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DNO_0821 response regulator receiver domain protein K02477 K02477; two-component system, LytTR family, response regulator
D DNO_0160 ntrY; histidine kinase, NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DNO_0161 ntrX; response regulator, NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DNO_0434 pilS; two-componenent sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNO_0435 pilR; two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D DNO_0869 two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNO_0868 two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNO_1093 chpA; chemotaxis protein ChpA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D DNO_1097 pilG; twitching motility regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D DNO_1096 pilH; twitching motility regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
C 02035 Bacterial motility proteins [BR:dno02035]
D DNO_0869 two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNO_0867 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D DNO_0868 two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNO_1097 pilG; twitching motility regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D DNO_1096 pilH; twitching motility regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D DNO_1095 hypothetical protein K02659 pilI; twitching motility protein PilI
D DNO_1094 pilJ; twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D DNO_1093 chpA; chemotaxis protein ChpA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D DNO_0435 pilR; two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D DNO_0434 pilS; two-componenent sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNO_0675 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DNO_0676 pilU; twitching motility protein PilU K02670 pilU; twitching motility protein PilU
D DNO_0110 fimA; fimbrial subunit FimA K02650 pilA; type IV pilus assembly protein PilA
D DNO_1126 fimN; type IV fimbrial biogenesis nucleotide binding protein FimN K02652 pilB; type IV pilus assembly protein PilB
D DNO_1125 fimO; type IV fimbrial biogenesis protein FimO K02653 pilC; type IV pilus assembly protein PilC
D DNO_1124 fimP; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DNO_0515 type 4 fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D DNO_0348 pilQ; type IV fimbrial pore PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DNO_0346 pilO; type IV fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D DNO_0345 pilN; type IV fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D DNO_0344 pilM; type IV fimbrial biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DNO_1215 pilZ; type IV fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D DNO_0894 pilV; conserved hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D DNO_0893 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D DNO_0895 pilC; type IV fimbrial tip adhesin K02674 pilY1; type IV pilus assembly protein PilY1
D DNO_0890 type IV fimbrial biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:dno04812]
D DNO_0967 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DNO_0976 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DNO_0977 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DNO_0915 minC; septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D DNO_0914 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DNO_0913 septum formation topological specificity factor MinE superfamily protein K03608 minE; cell division topological specificity factor
D DNO_1149 partioning protein, ParB/SpoJ family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dno04147]
D DNO_0362 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNO_0092 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNO_1036 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DNO_1200 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNO_0073 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D DNO_1339 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNO_0826 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNO_0163 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNO_0376 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DNO_1277 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DNO_1299 histidine triad (HIT) domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DNO_1002 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNO_1071 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DNO_0414 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DNO_0468 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNO_0213 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DNO_0510 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DNO_0105 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DNO_0918 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DNO_1100 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNO_1223 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNO_0814 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNO_0706 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:dno02048]
D DNO_0167 csy1; conserved hypothetical protein K19127 csy1; CRISPR-associated protein Csy1
D DNO_0168 csy2; conserved hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D DNO_0169 csy3; conserved hypothetical protein K19129 csy3; CRISPR-associated protein Csy3
D DNO_0170 csy4; conserved hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D DNO_0220 hsdR; type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DNO_0222 hsdS; type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DNO_0223 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DNO_1161 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DNO_0274 toxA1; plasmid maintenance system killer family protein ToxA1 K07334 higB-1; toxin HigB-1
D DNO_0273 plasmid maintenance system killer family protein K07334 higB-1; toxin HigB-1
D DNO_1039 toxA2; plasmid maintenance system killer family protein ToxA2 K07334 higB-1; toxin HigB-1
D DNO_0272 vapI; virulence-associated protein VapI K21498 higA-1; antitoxin HigA-1
D DNO_1040 vapA3; virulence-associated protein VapA3 K21498 higA-1; antitoxin HigA-1
D DNO_0275 vapA1; virulence-associated protein VapA1 K21498 higA-1; antitoxin HigA-1
D DNO_0271 vapA2; virulence-associated protein VapA2 K21498 higA-1; antitoxin HigA-1
D DNO_1042 vapC2; virulence-associated protein VapC2 K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DNO_0277 vapC1; virulence-associated protein VapC1 K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DNO_1041 vapB2; virulence-associated protein VapB2 K18829 mvpT; antitoxin VapB
D DNO_0276 vapB1; virulence-associated protein VapB1 K18829 mvpT; antitoxin VapB
D DNO_0976 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DNO_0967 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DNO_0678 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DNO_0677 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DNO_0734 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNO_0523 conserved hypothetical protein K09159 cptB; antitoxin CptB
D DNO_1196 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:dno04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:dno04090]
C 01504 Antimicrobial resistance genes [BR:dno01504]
D DNO_1203 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D DNO_1190 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNO_1191 acrF; mutidrug efflux protein K18138 acrB; multidrug efflux pump
D DNO_1192 outer membrane multidrug efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dno00537]
D DNO_0105 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DNO_0073 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dno03100]
D DNO_0733 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_0885 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_1307 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_1233 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DNO_0793 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_1087 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DNO_0946 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DNO_0947 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DNO_0410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DNO_0411 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DNO_1220 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DNO_0066 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DNO_0731 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DNO_0732 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DNO_1292 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DNO_1221 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DNO_0056 tRNA-His K14226 tRNA-His; tRNA His
D DNO_0886 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DNO_1234 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DNO_1308 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DNO_1193 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0231 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0812 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_1090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DNO_0846 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DNO_0845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DNO_0165 tRNA-Met K14230 tRNA-Met; tRNA Met
D DNO_0613 tRNA-Met K14230 tRNA-Met; tRNA Met
D DNO_0032 tRNA-Met K14230 tRNA-Met; tRNA Met
D DNO_0059 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DNO_0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DNO_0054 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DNO_0943 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DNO_0283 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DNO_0463 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DNO_1046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DNO_1291 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DNO_1089 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DNO_1289 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DNO_1293 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DNO_0233 tRNA-Val K14237 tRNA-Val; tRNA Val
D DNO_0409 tRNA-Val K14237 tRNA-Val; tRNA Val
D DNO_0887 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_1309 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_1235 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DNO_0884 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_1232 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_1306 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DNO_0883 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_1231 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_1305 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DNO_0193 ssrA; 10Sa RNA (tmRNA) K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DNO_0923 short chain dehydrogenase family protein K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D DNO_0144 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D DNO_0792 msrA-B; methionine sulfoxide reductase MsrA-B K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D DNO_0557 alkyl hydroperoxide reductase/thiol specific antioxidant family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DNO_0143 ahpC; alkyl hydroperoxide reductase C22 subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D DNO_0911 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D DNO_1333 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DNO_0247 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DNO_0680 aat; leucyl-phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D DNO_0839 transglutaminase family protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D DNO_0568 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DNO_0805 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DNO_0628 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D DNO_0574 thioesterase family domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DNO_0388 conserved hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DNO_0415 TatD family DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DNO_0727 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DNO_0156 def; formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DNO_1000 maf-2; Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D DNO_0842 MoxR family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DNO_0552 rnfD; electron transport complex protein, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D DNO_0553 rnfC; electron transport complex protein, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D DNO_0554 rnfB; electron transport complex protein, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D DNO_0811 nqrA; NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D DNO_0810 nqrB; NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D DNO_0809 nqrC; NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D DNO_0808 nqrD; NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D DNO_0807 nqrE; NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D DNO_0806 nqrF; NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D DNO_0551 rnfG; electron transport complex protein, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D DNO_0550 rnfE; electron transport complex protein, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D DNO_0555 rnfA; electron transport complex protein, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D DNO_1297 fld; flavodoxin K03840 fldB; flavodoxin II
D DNO_0833 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DNO_0204 alanine racemase domain protein K06997 yggS; PLP dependent protein
D DNO_0106 conserved hypothetical protein K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D DNO_0563 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D DNO_0296 HemY protein K02498 hemY; HemY protein
D DNO_0441 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D DNO_0440 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D DNO_1154 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D DNO_0200 AbgT transporter family protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D DNO_0091 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D DNO_0714 phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DNO_1159 transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D DNO_0656 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DNO_0230 tig; trigger factor K03545 tig; trigger factor
D DNO_0992 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D DNO_0203 Mg chelatase family protein K07391 comM; magnesium chelatase family protein
D DNO_0786 OsmC-like protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D DNO_0822 response regulator receiver domain protein-DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DNO_0639 conserved hypothetical protein K07460 yraN; putative endonuclease
D DNO_0154 dprA; DNA processing protein DprA K04096 smf; DNA processing protein
D DNO_0743 phage terminase, large subunit K06909 xtmB; phage terminase large subunit
D DNO_0485 ATPase, AAA family domain protein K07478 ycaJ; putative ATPase
D DNO_1342 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DNO_0386 transposase IS200-like protein K07491 rayT; REP-associated tyrosine transposase
D DNO_0328 transposase IS200-like protein K07491 rayT; REP-associated tyrosine transposase
D DNO_0387 transposase, IS605 family K07496 K07496; putative transposase
D DNO_1341 transposase, IS605 family K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D DNO_0954 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DNO_0828 agcS; sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DNO_1103 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D DNO_0009 permease family protein K07085 K07085; putative transport protein
C 99978 Cell growth
D DNO_0466 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D DNO_0011 uspA; universal stress family protein K06149 uspA; universal stress protein A
D DNO_0350 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D DNO_1244 phoH; phospahte starvation induced protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D DNO_0567 conserved hypothetical protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D DNO_0484 LolA family outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D DNO_0067 hypothetical lipoprotein K02494 lolB; outer membrane lipoprotein LolB
D DNO_0650 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D DNO_0682 OmpH family protein K06142 hlpA; outer membrane protein
D DNO_0958 lipoprotein K06194 nlpD; lipoprotein NlpD
D DNO_1302 conserved hypothetical lipoprotein K07280 K07280; outer membrane protein
D DNO_0025 conserved hypothetical protein K07280 K07280; outer membrane protein
D DNO_0372 conserved hypothetical protein K07340 ybbJ; inner membrane protein
D DNO_0516 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D DNO_1066 phoU; phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D DNO_0625 Periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D DNO_1216 TerC family protein K05794 terC; tellurite resistance protein TerC
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DNO_0402 colicin V family protein CvpA K03558 cvpA; membrane protein required for colicin V production
D DNO_0497 paraquat-inducible protein B family K06192 pqiB; paraquat-inducible protein B
D DNO_0802 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DNO_0837 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D DNO_0835 sufD; SufD protein K09015 sufD; Fe-S cluster assembly protein SufD
D DNO_0205 FxsA cytoplasmic membrane protein family K07113 fxsA; UPF0716 protein FxsA
D DNO_0629 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D DNO_0794 LemA family protein K03744 lemA; LemA protein
D DNO_1226 conserved hypothetical lipoprotein K03744 lemA; LemA protein
D DNO_0591 hypothetical protein K03745 slyX; SlyX protein
D DNO_0153 conserved hypothetical protein K03747 smg; Smg protein
D DNO_0370 conserved hypothetical lipoprotein K05805 creA; CreA protein
D DNO_0035 conserved hypothetical membrane protein K03748 sanA; SanA protein
D DNO_0368 conserved hypothetical membrane protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D DNO_1225 hypothetical membrane protein K06872 K06872; uncharacterized protein
D DNO_0575 conserved hypothetical protein K06883 K06883; uncharacterized protein
D DNO_0146 conserved hypothetical protein K06945 K06945; uncharacterized protein
D DNO_0125 alpha-beta fold family protein K07019 K07019; uncharacterized protein
D DNO_0928 conserved hypothetical protein K07054 K07054; uncharacterized protein
D DNO_0248 conserved hypothetical lipoprotein K07080 K07080; uncharacterized protein
D DNO_0127 conserved hypothetical protein K07080 K07080; uncharacterized protein
D DNO_0412 conserved hypothetical membrane protein K07089 K07089; uncharacterized protein
D DNO_0075 conserved hypothetical membrane protein K07090 K07090; uncharacterized protein
D DNO_0392 conserved hypothetical membrane protein K07090 K07090; uncharacterized protein
D DNO_1246 conserved hypothetical protein K07126 K07126; uncharacterized protein
D DNO_0145 hypothetical protein K07131 K07131; uncharacterized protein
D DNO_0950 conserved hypothetical protein K08998 K08998; uncharacterized protein
D DNO_0425 conserved hypothetical protein K09005 K09005; uncharacterized protein
D DNO_1080 GatB-Yqey domain protein K09117 K09117; uncharacterized protein
D DNO_0898 conserved hypothetical protein K09158 K09158; uncharacterized protein
D DNO_0303 hypothetical protein K09791 K09791; uncharacterized protein
D DNO_1105 conserved hypothetical protein K09794 K09794; uncharacterized protein
D DNO_0990 conserved hypothetical protein K09801 K09801; uncharacterized protein
D DNO_0218 conserved hypothetical protein K09805 K09805; uncharacterized protein
D DNO_0804 conserved hypothetical protein K05952 K05952; uncharacterized protein
D DNO_0496 hypothetical lipoprotein K09857 K09857; uncharacterized protein
D DNO_0717 conserved hypothetical protein K09895 K09895; uncharacterized protein
D DNO_1158 conserved hypothetical protein K09922 K09922; uncharacterized protein
D DNO_0332 conserved hypothetical membrane protein K09928 K09928; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 9, 2024