+F Repair protein KO
#
DNA Repair and Recombination Proteins - Dictyostelium purpureum (cellular slime mold)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D DICPUDRAFT_75205 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DICPUDRAFT_50558 DEAD/DEAH box helicase K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
C BER (base exicision repair)
D DNA glycosylases
E DICPUDRAFT_10636 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E DICPUDRAFT_158140 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E DICPUDRAFT_156172 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E DICPUDRAFT_148999 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E DICPUDRAFT_155881 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E DICPUDRAFT_8477 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E DICPUDRAFT_9650 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F DICPUDRAFT_28208 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F DICPUDRAFT_153145 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E DNA polymerase epsilon complex
F DICPUDRAFT_94903 hypothetical protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F DICPUDRAFT_77138 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F DICPUDRAFT_92261 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F DICPUDRAFT_155311 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E DICPUDRAFT_32201 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E DICPUDRAFT_31355 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E DICPUDRAFT_25751 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E DICPUDRAFT_152605 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
E DICPUDRAFT_33968 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
E DICPUDRAFT_79761 hypothetical protein K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E DICPUDRAFT_99531 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E DICPUDRAFT_153568 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E DICPUDRAFT_6215 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E DICPUDRAFT_36817 hypothetical protein K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F DICPUDRAFT_94215 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F DICPUDRAFT_48776 hypothetical protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F DICPUDRAFT_88388 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F DICPUDRAFT_157447 hypothetical protein K10609 CUL4; cullin 4
F DICPUDRAFT_86223 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F DICPUDRAFT_149604 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F DICPUDRAFT_46649 RNA polymerase II core subunit K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F DICPUDRAFT_155135 RNA polymerase II core subunit K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F DICPUDRAFT_85770 RNA polymerase II core subunit K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F DICPUDRAFT_154339 RNA polymerase II core subunit K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F DICPUDRAFT_148388 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F DICPUDRAFT_30399 RNA polymerase II core subunit K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F DICPUDRAFT_81794 RNA polymerase II core subunit K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F DICPUDRAFT_90278 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F DICPUDRAFT_32553 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F DICPUDRAFT_88388 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F DICPUDRAFT_157447 hypothetical protein K10609 CUL4; cullin 4
F DICPUDRAFT_86223 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
F DICPUDRAFT_151851 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F DICPUDRAFT_153008 hypothetical protein K10841 ERCC6; DNA excision repair protein ERCC-6
F DICPUDRAFT_87406 hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E DICPUDRAFT_96425 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E DICPUDRAFT_50564 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E DICPUDRAFT_89879 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E DICPUDRAFT_36877 TFIIH subunit K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E DICPUDRAFT_9126 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E DICPUDRAFT_31198 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E DICPUDRAFT_42067 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E DICPUDRAFT_29225 p34-cdc2 protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E DICPUDRAFT_41556 hypothetical protein K06634 CCNH; cyclin H
E DICPUDRAFT_31276 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E DICPUDRAFT_94345 hypothetical protein K07466 RFA1; replication factor A1
D Other NER factors
E DICPUDRAFT_20909 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1
E DICPUDRAFT_48253 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E DICPUDRAFT_25751 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E DICPUDRAFT_86559 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E DICPUDRAFT_74124 hypothetical protein K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1
E DICPUDRAFT_30280 hypothetical protein K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E DICPUDRAFT_151475 hypothetical protein K03869 CUL3; cullin 3
E DICPUDRAFT_85955 hypothetical protein K03872 ELOC; elongin-C
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E DICPUDRAFT_50444 hypothetical protein K08735 MSH2; DNA mismatch repair protein MSH2
E DICPUDRAFT_52102 hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3
E DICPUDRAFT_55353 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E DICPUDRAFT_55923 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1
E DICPUDRAFT_152626 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
E DICPUDRAFT_153264 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E DICPUDRAFT_28208 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E DICPUDRAFT_153145 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
D RPA (replication factor A)
E DICPUDRAFT_94345 hypothetical protein K07466 RFA1; replication factor A1
D RFC (replication factor C)
E DICPUDRAFT_96642 hypothetical protein K10754 RFC1; replication factor C subunit 1
E DICPUDRAFT_150434 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
E DICPUDRAFT_44017 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
E DICPUDRAFT_153140 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
E DICPUDRAFT_34783 replication factor C subunit K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E DICPUDRAFT_32201 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E DICPUDRAFT_150348 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E DICPUDRAFT_25751 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E DICPUDRAFT_34779 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
E DICPUDRAFT_5561 hypothetical protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E DICPUDRAFT_90890 hypothetical protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E DICPUDRAFT_34779 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
D BRCA complex
E DICPUDRAFT_75690 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
E DICPUDRAFT_78805 hypothetical protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E DICPUDRAFT_78805 hypothetical protein K04482 RAD51; DNA repair protein RAD51
E DICPUDRAFT_18874 hypothetical protein K10870 RAD51L2; RAD51-like protein 2
E DICPUDRAFT_149385 hypothetical protein K10879 XRCC2; DNA-repair protein XRCC2
D Rad52 family proteins
E DICPUDRAFT_148248 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
E DICPUDRAFT_97740 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
D RecQ family DNA helicases
E DICPUDRAFT_5670 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E DICPUDRAFT_5670 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E DICPUDRAFT_37309 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E DICPUDRAFT_159539 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E DICPUDRAFT_94345 hypothetical protein K07466 RFA1; replication factor A1
D Protein phosphatase 4
E DICPUDRAFT_76474 hypothetical protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E DICPUDRAFT_6811 hypothetical protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E DICPUDRAFT_85184 hypothetical protein K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E DICPUDRAFT_157501 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E DICPUDRAFT_34586 hypothetical protein K19022 AP5B1; AP-5 complex subunit beta-1
E DICPUDRAFT_156811 hypothetical protein K19023 AP5M1; AP-5 complex subunit mu-1
E DICPUDRAFT_28941 hypothetical protein K19024 AP5S1; AP-5 complex subunit sigma-1
E DICPUDRAFT_74957 hypothetical protein K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E DICPUDRAFT_148904 hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5
E DICPUDRAFT_39291 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6
E DICPUDRAFT_83769 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E DICPUDRAFT_90873 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E DICPUDRAFT_146906 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E DICPUDRAFT_146576 hypothetical protein K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E DICPUDRAFT_154097 hypothetical protein K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E DICPUDRAFT_159135 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E DICPUDRAFT_78969 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E DICPUDRAFT_95477 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E DICPUDRAFT_80142 hypothetical protein K19026 SPG11; spatacsin
E DICPUDRAFT_151501 hypothetical protein K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E DICPUDRAFT_59449 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E DICPUDRAFT_159857 hypothetical protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E DICPUDRAFT_91262 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E DICPUDRAFT_153265 hypothetical protein K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E DICPUDRAFT_146993 hypothetical protein K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E DICPUDRAFT_34376 hypothetical protein K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E DICPUDRAFT_7342 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E DICPUDRAFT_158675 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
E DICPUDRAFT_150499 DNA-dependent protein kinase subunit K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
D MRX complex
E DICPUDRAFT_34779 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
D DNA Ligase 4 complex
E DICPUDRAFT_97591 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E DICPUDRAFT_73949 hypothetical protein K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E DICPUDRAFT_152605 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
E DICPUDRAFT_33968 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E DICPUDRAFT_153568 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E DICPUDRAFT_49947 hypothetical protein K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E DICPUDRAFT_151143 hypothetical protein K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
D FA core complex binding factors
E DICPUDRAFT_155411 hypothetical protein K15360 STRA13; centromere protein X
E DICPUDRAFT_11209 hypothetical protein K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E DICPUDRAFT_5670 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E DICPUDRAFT_37309 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E DICPUDRAFT_159539 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D FANCD2-I complex
E DICPUDRAFT_49928 hypothetical protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E DICPUDRAFT_75690 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
E DICPUDRAFT_5561 hypothetical protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E DICPUDRAFT_148139 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E DICPUDRAFT_78805 hypothetical protein K04482 RAD51; DNA repair protein RAD51
E DICPUDRAFT_18874 hypothetical protein K10870 RAD51L2; RAD51-like protein 2
E DICPUDRAFT_148983 hypothetical protein K11137 TELO2; telomere length regulation protein
E DICPUDRAFT_54966 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E DICPUDRAFT_53645 protein phosphatase 6 catalytic subunit K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E DICPUDRAFT_92107 hypothetical protein K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E DICPUDRAFT_148294 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E DICPUDRAFT_94418 hypothetical protein K24752 WDR70; WD repeat-containing protein 70
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D DICPUDRAFT_95543 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
C B-family DNA polymerases
D DICPUDRAFT_148772 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D DICPUDRAFT_56481 ubiquitin-conjugating enzyme E2-17 kDa K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D DICPUDRAFT_77720 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D DICPUDRAFT_26622 hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
C Other TLS factors
D DICPUDRAFT_32201 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D DICPUDRAFT_157129 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D DICPUDRAFT_27593 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D DICPUDRAFT_36380 hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D DICPUDRAFT_34318 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D DICPUDRAFT_74539 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D DICPUDRAFT_150434 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
D DICPUDRAFT_44017 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
D DICPUDRAFT_153140 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D DICPUDRAFT_34783 replication factor C subunit K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D DICPUDRAFT_34318 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D DICPUDRAFT_98969 hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
C Triple T complex
D DICPUDRAFT_148983 hypothetical protein K11137 TELO2; telomere length regulation protein
D DICPUDRAFT_156651 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D DICPUDRAFT_25422 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D DICPUDRAFT_150412 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D DICPUDRAFT_157188 hypothetical protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D DICPUDRAFT_29047 hypothetical protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D DICPUDRAFT_51485 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D DICPUDRAFT_148051 hypothetical protein K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D DICPUDRAFT_46137 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
B Other factors with a suspected DNA repair function
C DNA polymerases
D DICPUDRAFT_26655 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D DICPUDRAFT_93932 hypothetical protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D DICPUDRAFT_37896 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D DICPUDRAFT_153814 hypothetical protein K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D DICPUDRAFT_75974 hypothetical protein K21813 ENDOV; endonuclease V [EC:3.1.26.-]
C Helicases
C PSO4 complex
D DICPUDRAFT_96440 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D DICPUDRAFT_77715 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D DICPUDRAFT_86122 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D DICPUDRAFT_83900 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D DICPUDRAFT_39209 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DICPUDRAFT_56203 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DICPUDRAFT_49298 ribonucleotide reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D DICPUDRAFT_56591 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D DICPUDRAFT_75205 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E DICPUDRAFT_10636 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E DICPUDRAFT_158140 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E DICPUDRAFT_156172 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E DICPUDRAFT_8637 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E DICPUDRAFT_155881 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E DICPUDRAFT_8477 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
E DICPUDRAFT_158421 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E DICPUDRAFT_158421 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F DICPUDRAFT_159167 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D DICPUDRAFT_39209 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DICPUDRAFT_56203 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025