+E Transcription factors KO
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Transcription Factors - Dryobates pubescens (Downy woodpecker)
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
D 104309058 XBP1; X-box-binding protein 1 K09027 XBP1; X box-binding protein 1
D 104301752 JUN; transcription factor AP-1 isoform X1 K04448 JUN; transcription factor AP-1
C AP-1(-like) components, Fos
D 104308225 FOS; proto-oncogene c-Fos K04379 FOS; proto-oncogene protein c-fos
D 104298806 protein fosB-like K09029 FOSB; protein FosB
D 104303716 FOSL2; fos-related antigen 2 K09030 FOSL2; fos-like antigen 2
D 104297574 ATF3; cyclic AMP-dependent transcription factor ATF-3 isoform X1 K09032 ATF3; activating transcription factor 3
D 104308193 JDP2; LOW QUALITY PROTEIN: jun dimerization protein 2 K09033 JDP2; jun dimerization protein 2
D 104297573 BATF3; basic leucine zipper transcriptional factor ATF-like 3 K09034 BATF; ATF-like basic leucine zipper transcriptional factor
D 104308224 BATF; basic leucine zipper transcriptional factor ATF-like K09034 BATF; ATF-like basic leucine zipper transcriptional factor
C AP-1(-like) components, Maf
D 104299739 MAFA; transcription factor MafA K07595 MAFA; transcription factor MAFA
D 104307552 MAFB; transcription factor MafB K09036 MAFB; transcription factor MAFB
D 104307606 MAFK; transcription factor MafK K09037 MAFF_G_K; transcription factor MAFF/G/K
D 104297882 MAFG; transcription factor MafG K09037 MAFF_G_K; transcription factor MAFF/G/K
D 104302026 MAFF; transcription factor MafF K09037 MAFF_G_K; transcription factor MAFF/G/K
C AP-1(-like) components, NF-E2
D 104307641 NFE2L3; nuclear factor erythroid 2-related factor 3 K09040 NFE2L1_3; nuclear factor erythroid 2-related factor 1/3
D 104299718 NFE2L1; nuclear factor erythroid 2-related factor 1 K09040 NFE2L1_3; nuclear factor erythroid 2-related factor 1/3
D 104305737 NFE2L2; nuclear factor erythroid 2-related factor 2 isoform X1 K05638 NFE2L2; nuclear factor erythroid 2-related factor 2
D 104297617 BACH2; transcription regulator protein BACH2 K09042 BACH; transcription regulator BACH
D 104304905 BACH1; transcription regulator protein BACH1 K09042 BACH; transcription regulator BACH
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
D 104305746 ATF2; cyclic AMP-dependent transcription factor ATF-2 isoform X1 K04450 ATF2; cyclic AMP-dependent transcription factor ATF-2
D 104297574 ATF3; cyclic AMP-dependent transcription factor ATF-3 isoform X1 K09032 ATF3; activating transcription factor 3
D 104302010 ATF4; cyclic AMP-dependent transcription factor ATF-4 K04374 ATF4; cyclic AMP-dependent transcription factor ATF-4
D 104304672 ATF7; LOW QUALITY PROTEIN: cyclic AMP-dependent transcription factor ATF-7 K09045 ATF7; activating transcription factor 7
D 104307525 CREB5; cyclic AMP-responsive element-binding protein 5 K09047 CREB5; cyclic AMP-responsive element-binding protein 5
C CREB
D 104298923 CREB1; cyclic AMP-responsive element-binding protein 1 isoform X1 K05870 CREB1; cyclic AMP-responsive element-binding protein 1
D 104302513 CREB3L2; cyclic AMP-responsive element-binding protein 3-like protein 2 K09048 CREB3; cyclic AMP-responsive element-binding protein 3
D 104298240 CREB3; LOW QUALITY PROTEIN: cyclic AMP-responsive element-binding protein 3 K09048 CREB3; cyclic AMP-responsive element-binding protein 3
D 104303244 CREB3L3; cyclic AMP-responsive element-binding protein 3-like protein 3 K09048 CREB3; cyclic AMP-responsive element-binding protein 3
D 104300580 CREB3L1; cyclic AMP-responsive element-binding protein 3-like protein 1 K09048 CREB3; cyclic AMP-responsive element-binding protein 3
D 104297052 CREM; cAMP-responsive element modulator isoform X1 K09052 CREM; cAMP response element modulator
D 104305505 ATF1; cyclic AMP-dependent transcription factor ATF-1 K09053 ATF1; activating transcription factor 1
D 104308001 ATF6; cyclic AMP-dependent transcription factor ATF-6 alpha K09054 ATF6A; cyclic AMP-dependent transcription factor ATF-6 alpha
C C/EBP-like factors
D 104302263 CEBPG; CCAAT/enhancer-binding protein gamma K10049 CEBPG; CCAAT/enhancer binding protein (C/EBP), gamma
C bZIP/PAR
D 104310123 HLF; hepatic leukemia factor K09057 HLF; hepatic leukemia factor
D 104301996 TEF; thyrotroph embryonic factor K09058 TEF; thyrotrophic embryonic factor
D 104301133 NFIL3; nuclear factor interleukin-3-regulated protein K09059 NFIL3; nuclear factor, interleukin 3 regulated
C Plant bZIP factors
C ZIP only
D 104304557 GCFC2; GC-rich sequence DNA-binding factor 2 K09061 GCF; GC-rich sequence DNA-binding factor
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
D 104308205 TCF3; transcription factor E2-alpha K09063 TCF3; transcription factor E2-alpha
D 104309865 TCF12; transcription factor 12 K15603 TCF4_12; transcription factor 4/12
C Myogenic transcription factors
D 104304403 MYOD1; myoblast determination protein 1 K09064 MYOD1; myogenic factor 3
D 104299278 MYF5; myogenic factor 5 K18484 MYF5; myogenic factor 5
D 104299277 MYF6; myogenic factor 6 K18485 MYF6; myogenic factor 6
C Achaete-Scute
D 104307311 ASCL4; achaete-scute homolog 4 K09067 ASCL; achaete-scute complex protein
D 104307312 ASCL1; achaete-scute homolog 1 K09067 ASCL; achaete-scute complex protein
D 104304386 ASCL3; achaete-scute homolog 3 K09067 ASCL; achaete-scute complex protein
C Tal/Twist/Atonal/Hen, Lymphoid factors
D 104307905 TAL1; T-cell acute lymphocytic leukemia protein 1 K09068 TAL; T-cell acute lymphocytic leukemia protein
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
D 104300202 TWIST2; twist-related protein 2 K09069 TWIST; twist
D 104301432 TCF15; transcription factor 15 K09070 TCF15; transcription factor 15
D 104300517 HAND2; heart- and neural crest derivatives-expressed protein 2 K18486 HAND2; heart-and neural crest derivatives-expressed protein 2
D 104299894 FERD3L; fer3-like protein K22400 FERD3L; Fer3-like protein
C Tal/Twist/Atonal/Hen, HEN
D 104298670 NHLH2; helix-loop-helix protein 2 K09075 NHLH; nescient helix-loop-helix protein
C Tal/Twist/Atonal/Hen, Mesp
D 104297408 mesoderm posterior protein 2-like K09076 MESP; mesoderm posterior
D 104308285 MSGN1; mesogenin-1 K09077 MSGN1; mesogenin 1
C Tal/Twist/Atonal/Hen, Atonal
D 104298966 NEUROD1; neurogenic differentiation factor 1 K08033 NEUROD1; neurogenic differentiation factor 1
D 104302583 NEUROD2; neurogenic differentiation factor 2 K09078 NEUROD2; neurogenic differentiation factor 2
D 104304054 NEUROD6; neurogenic differentiation factor 6 K09080 NEUROD6; neurogenic differentiation factor 6
D 104296199 NEUROG2; neurogenin-2 K09082 NEUROG2; neurogenin 2
D 104306174 ATOH7; protein atonal homolog 7 K09083 ATOH1_7; atonal protein 1/7
D 104310005 OLIG3; oligodendrocyte transcription factor 3 K09085 BHLHB1_6_7; class B basic helix-loop-helix protein 1/6/7
D 104306433 oligodendrocyte transcription factor 3-like K09085 BHLHB1_6_7; class B basic helix-loop-helix protein 1/6/7
D 104299281 BHLHA15; class A basic helix-loop-helix protein 15 K08040 BHLHB8; class B basic helix-loop-helix protein 8
C Tal/Twist/Atonal/Hen, Pancreatic factors
D 104308754 BHLHE23; class E basic helix-loop-helix protein 23 K09086 BHLHB4_5; class B basic helix-loop-helix protein 4/5
C Hairy, Hairy/E(SPL)
D 104307664 HES1; transcription factor HES-1 K06054 HES1; hairy and enhancer of split 1
D 104305867 HES4; LOW QUALITY PROTEIN: transcription factor HES-4 K06054 HES1; hairy and enhancer of split 1
D 104304085 transcription cofactor HES-6-like K09087 HES2_6_7; hairy and enhancer of split 2/6/7
D 104309891 HES5; transcription factor HES-5 K06055 HES5; hairy and enhancer of split 5
D 104309923 transcription factor HES-5-like K06055 HES5; hairy and enhancer of split 5
D 104309924 transcription factor HES-5-like K06055 HES5; hairy and enhancer of split 5
D 104307378 HEYL; hairy/enhancer-of-split related with YRPW motif-like protein K09091 HEY; hairy and enhancer of split related with YRPW motif
D 104308347 HEY2; hairy/enhancer-of-split related with YRPW motif protein 2 K09091 HEY; hairy and enhancer of split related with YRPW motif
D 104304987 HEY1; hairy/enhancer-of-split related with YRPW motif protein 1 K09091 HEY; hairy and enhancer of split related with YRPW motif
D 104309253 BHLHE40; class E basic helix-loop-helix protein 40 K03729 BHLHB2; class B basic helix-loop-helix protein 2
D 104308756 TCFL5; transcription factor-like 5 protein K09092 TCFL5; transcription factor-like 5
C Hairy, Fungal regulators
C Factors with PAS domain
D 104299897 AHR; LOW QUALITY PROTEIN: aryl hydrocarbon receptor K09093 AHR; aryl hydrocarbon receptor
D 104300216 LOW QUALITY PROTEIN: aryl hydrocarbon receptor-like K09093 AHR; aryl hydrocarbon receptor
D 104296857 AHRR; aryl hydrocarbon receptor repressor K09094 AHRR; aryl hydrocarbon receptor repressor
D 104303118 HIF1A; hypoxia-inducible factor 1-alpha K08268 HIF1A; hypoxia-inducible factor 1 alpha
D 104309315 EPAS1; endothelial PAS domain-containing protein 1 K09095 HIF2A; hypoxia-inducible factor 2 alpha
D 104303290 ARNT2; aryl hydrocarbon receptor nuclear translocator 2 K15589 ARNT2; aryl hydrocarbon receptor nuclear translocator 2
D 104302484 NPAS3; neuronal PAS domain-containing protein 3 K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3
D 104310038 NPAS2; neuronal PAS domain-containing protein 2 K09026 NPAS2; neuronal PAS domain-containing protein 2
D 104301179 PASD1; PAS domain-containing protein 1 K09026 NPAS2; neuronal PAS domain-containing protein 2
D 104299133 CLOCK; circadian locomoter output cycles protein kaput isoform X1 K02223 CLOCK; circadian locomoter output cycles kaput protein [EC:2.3.1.48]
D 104296679 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1 K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1
D 104296318 ARNTL2; aryl hydrocarbon receptor nuclear translocator-like protein 2 K09099 ARNTL2; aryl hydrocarbon receptor nuclear translocator-like protein 2
D 104298075 SIM1; LOW QUALITY PROTEIN: single-minded homolog 1 K09100 SIM; single-minded
D 104304933 SIM2; single-minded homolog 2 K09100 SIM; single-minded
C Yabby
C INO
C HLH domain only
D 104303403 ID2; DNA-binding protein inhibitor ID-2 K17693 ID2; DNA-binding protein inhibitor ID2
D 104304210 ID3; DNA-binding protein inhibitor ID-3 K17694 ID3; DNA-binding protein inhibitor ID3
D 104305673 ID4; DNA-binding protein inhibitor ID-4 K17695 ID4; DNA-binding protein inhibitor ID4
D 104303980 EBF1; transcription factor COE1 K09103 EBF; early B-cell factor
D 104308779 transcription factor COE3-like K09103 EBF; early B-cell factor
D 104301240 EBF2; transcription factor COE2 isoform X1 K09103 EBF; early B-cell factor
D 104306156 EBF3; transcription factor COE3 isoform X1 K09103 EBF; early B-cell factor
D 104301486 CCNDBP1; cyclin-D1-binding protein 1 K21626 CCNDBP1; cyclin-D1-binding protein 1
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
D 104305391 TFEB; transcription factor EB K15590 TFEB; transcription factor EB
D 104309192 TFEC; transcription factor EC K15591 TFEC; transcription factor EC
D 104307989 MITF; microphthalmia-associated transcription factor isoform X1 K09455 MITF; microphthalmia-associated transcription factor
D 104297580 SREBF1; sterol regulatory element-binding protein 1 K07197 SREBP1; sterol regulatory element-binding transcription factor 1
D 104301987 SREBF2; sterol regulatory element-binding protein 2 K09107 SREBP2; sterol regulatory element-binding transcription factor 2
D 104300294 TFAP4; transcription factor AP-4 K09108 TFAP4; transcription factor AP-4
C Cell cycle controlling factors, Myc
D 104302934 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
D 104308315 MYCN; N-myc proto-oncogene protein K09109 NMYC; N-myc proto-oncogene protein
D 104307380 MYCL; protein L-Myc K09110 LMYC; L-myc proto-oncogene protein
C Cell cycle controlling factors, Mad/Max
D 104299810 protein max-like K04453 MAX; Max protein
D 104302880 MLXIPL; carbohydrate-responsive element-binding protein K09113 MLX; MAX-like protein X
D 104308476 MLXIP; MLX-interacting protein K09113 MLX; MAX-like protein X
D 104309570 MLX; max-like protein X K09113 MLX; MAX-like protein X
D 104303580 MXD4; max dimerization protein 4 K09114 MXD; MAX dimerization protein
D 104303997 MXD3; max dimerization protein 3 K09114 MXD; MAX dimerization protein
D 104308614 max dimerization protein 1-like K09114 MXD; MAX dimerization protein
D 104307113 MXI1; max-interacting protein 1 K09114 MXD; MAX dimerization protein
D 104302598 MNT; max-binding protein MNT K09115 MNT; MAX-binding protein
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
D 104308781 NFIA; nuclear factor 1 A-type K09168 NFIA; nuclear factor I/A
D 104303898 NFIB; LOW QUALITY PROTEIN: nuclear factor 1 B-type K09169 NFIB; nuclear factor I/B
D 104309507 NFIC; nuclear factor 1 C-type isoform X1 K09170 NFIC; nuclear factor I/C
C RF-X
D 104299640 RFX3; transcription factor RFX3 isoform X1 K09173 RFX1_2_3; regulatory factor X 1/2/3
D 104309487 RFX2; DNA-binding protein RFX2 K09173 RFX1_2_3; regulatory factor X 1/2/3
D 104307321 RFX4; transcription factor RFX4 K09174 RFX4; regulatory factor X 4
D 104297470 RFX6; DNA-binding protein RFX6 K19521 RFX6; regulatory factor X 6
D 104309862 RFX7; DNA-binding protein RFX7 K09175 RFX7; DNA-binding protein RFX7
C AP-2 (bHSH)
D 104304484 TFAP2B; transcription factor AP-2-beta isoform X1 K09176 TFAP2A_B; transcription factor AP-2 alpha/beta
D 104304636 TFAP2A; transcription factor AP-2-alpha K09176 TFAP2A_B; transcription factor AP-2 alpha/beta
D 104302685 TFAP2C; transcription factor AP-2 gamma K09177 TFAP2C; transcription factor AP-2 gamma
D 104304482 TFAP2D; transcription factor AP-2-delta K09178 TFAP2D; transcription factor AP-2 delta
D 104307428 TFAP2E; transcription factor AP-2-epsilon K09179 TFAP2E; transcription factor AP-2 epsilon
B Zinc finger
C Cys4 thyroid hormone receptor-like
D 104299672 THRB; thyroid hormone receptor beta isoform X1 K08362 THRB; thyroid hormone receptor beta
D 104304675 RARB; retinoic acid receptor beta isoform X1 K08528 RARB; retinoic acid receptor beta
D 104306208 PPARA; peroxisome proliferator-activated receptor alpha isoform X1 K07294 NR1C1; peroxisome proliferator-activated receptor alpha
D 104305340 PPARD; peroxisome proliferator-activated receptor delta isoform X1 K04504 NR1C2; peroxisome proliferator-activated receptor delta
D 104301898 PPARG; peroxisome proliferator-activated receptor gamma K08530 NR1C3; peroxisome proliferator-activated receptor gamma
D 104301691 NR1D1; nuclear receptor subfamily 1 group D member 1 K03728 NR1D1; nuclear receptor subfamily 1 group D member 1
D 104299674 NR1D2; nuclear receptor subfamily 1 group D member 2 K08531 NR1D2; nuclear receptor subfamily 1 group D member 2
D 104305194 RORA; nuclear receptor ROR-alpha isoform X1 K08532 NR1F1; RAR-related orphan receptor alpha
D 104308401 nuclear receptor ROR-beta-like K08533 NR1F2; RAR-related orphan receptor beta
D 104301698 RORB; nuclear receptor ROR-beta K08533 NR1F2; RAR-related orphan receptor beta
D 104296795 RORC; nuclear receptor ROR-gamma K08534 NR1F3; RAR-related orphan receptor gamma
D 104297430 NR1H3; oxysterols receptor LXR-alpha K08536 NR1H3; liver X receptor alpha
D 104298466 NR1H4; bile acid receptor K08537 NR1H4; farnesoid X receptor
D 104304646 bile acid receptor-like K08538 NR1H5; farnesoid X receptor beta
D 104296305 LOW QUALITY PROTEIN: bile acid receptor-like K08538 NR1H5; farnesoid X receptor beta
D 104299178 VDR; vitamin D3 receptor K08539 VDR; vitamin D3 receptor
D 104301087 nuclear receptor subfamily 1 group I member 2-like K08541 NR1I3; constitutive androstane receptor
C Cys4 hepatocyte nuclear factor 4-like
D 104307542 HNF4A; hepatocyte nuclear factor 4-alpha isoform X1 K07292 NR2A1; hepatocyte nuclear factor 4-alpha
D 104300987 HNF4G; hepatocyte nuclear factor 4-gamma isoform X1 K08037 NR2A2; hepatocyte nuclear factor 4-gamma
D 104303794 hepatocyte nuclear factor 4-beta-like isoform X1 K08542 NR2A3; hepatocyte nuclear factor 4-beta
D 104306479 RXRA; retinoic acid receptor RXR-alpha isoform X1 K08524 RXRA; retinoid X receptor alpha
D 104301541 RXRG; retinoic acid receptor RXR-gamma K08526 RXRG; retinoid X receptor gamma
D 104305184 NR2C1; LOW QUALITY PROTEIN: nuclear receptor subfamily 2 group C member 1 K08543 NR2C1; testicular receptor 2
D 104303436 NR2C2; nuclear receptor subfamily 2 group C member 2 K08544 NR2C2; testicular receptor 4
D 104296628 NR2E1; nuclear receptor subfamily 2 group E member 1 K08545 NR2E1; nuclear receptor subfamily 2 group E member 1
D 104298638 NR2E3; photoreceptor-specific nuclear receptor K08546 NR2E3; nuclear receptor subfamily 2 group E member 3
D 104298886 NR2F2; COUP transcription factor 2 isoform X1 K08548 NR2F2; COUP transcription factor 2
C Cys4 estrogen receptor-like
D 104297154 ESR1; estrogen receptor K08550 ESR1; estrogen receptor alpha
D 104303038 ESR2; estrogen receptor beta K08551 ESR2; estrogen receptor beta
D 104308190 ESRRB; steroid hormone receptor ERR2 K08553 NR3B2; estrogen-related receptor beta
D 104299875 ESRRG; estrogen-related receptor gamma isoform X1 K08554 NR3B3; estrogen-related receptor gamma
D 104301864 NR3C1; glucocorticoid receptor isoform X1 K05771 NR3C1; glucocorticoid receptor
D 104297115 NR3C2; mineralocorticoid receptor isoform X1 K08555 NR3C2; mineralocorticoid receptor
C Cys4 nerve growth factor IB-like
D 104306037 nuclear receptor subfamily 4 group A member 2-like K08558 NR4A2; nuclear receptor subfamily 4 group A member 2
D 104296937 NR4A2; nuclear receptor subfamily 4 group A member 2 K08558 NR4A2; nuclear receptor subfamily 4 group A member 2
D 104296852 NR4A3; nuclear receptor subfamily 4 group A member 3 K08559 NR4A3; nuclear receptor subfamily 4 group A member 3
C Cys4 Fushi tarazu-F1-like
D 104306508 NR5A1; steroidogenic factor 1 K08560 NR5A1; steroidogenic factor 1
D 104300586 NR5A2; nuclear receptor subfamily 5 group A member 2 K08027 NR5A2; nuclear receptor subfamily 5 group A member 2
C Cys4 germ cell nuclear factor
D 104306558 NR6A1; nuclear receptor subfamily 6 group A member 1 K08561 NR6A1; germ cell nuclear factor
C Cys4 Knirps/DAX1-like
D 104306056 NR0B1; nuclear receptor subfamily 0 group B member 1 K08562 NR0B1; nuclear receptor subfamily 0 group B member 1
D 104307406 NR0B2; nuclear receptor subfamily 0 group B member 2 K08563 NR0B2; nuclear receptor subfamily 0 group B member 2
C Cys4 GATA-factors
D 104308815 GATA2; endothelial transcription factor GATA-2 isoform X1 K17894 GATA2; GATA-binding protein 2
D 104300022 GATA3; trans-acting T-cell-specific transcription factor GATA-3 isoform X1 K17895 GATA3; GATA-binding protein 3
D 104306744 GATA4; transcription factor GATA-4 isoform X1 K09183 GATA4; GATA-binding protein 4
D 104308761 GATA5; transcription factor GATA-5 K17896 GATA5; GATA-binding protein 5
D 104307760 GATA6; transcription factor GATA-6 K17897 GATA6; GATA-binding protein 6
D 104304985 TRPS1; zinc finger transcription factor Trps1 isoform X1 K22040 TRPS1; atypical GATA-binding protein TRPS1
D 104306993 GATAD1; GATA zinc finger domain-containing protein 1 K23407 GATAD1; GATA zinc finger domain-containing protein 1
D 104302534 GATAD2B; transcriptional repressor p66-beta K23194 GATAD2; transcriptional repressor p66
D 104300732 GATAD2A; transcriptional repressor p66-alpha K23194 GATAD2; transcriptional repressor p66
D 104305929 RERE; LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein K05628 RERE; arginine-glutamic acid dipeptide repeats protein
D 104298211 MTA1; metastasis-associated protein MTA1 K11660 MTA; metastasis-associated protein MTA
D 104296745 MTA3; metastasis-associated protein MTA3 K11660 MTA; metastasis-associated protein MTA
D 104304363 DNA (cytosine-5)-methyltransferase 3A K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D 104301451 DNMT3B; LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 3B K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
D 104300158 ATRX; transcriptional regulator ATRX K10779 ATRX; transcriptional regulator ATRX
C Cys2His2 SP/KLF family and related proteins
D 104309612 SP1; transcription factor Sp1 K04684 SP1; transcription factor Sp1
D 104308609 SP2; transcription factor Sp2 K09192 SP2; transcription factor Sp2
D 104305768 SP3; transcription factor Sp3 K09193 SP3; transcription factor Sp3
D 104306288 SP4; transcription factor Sp4 K09194 SP4; transcription factor Sp4
D 104301617 KLF17; Krueppel-like factor 17 K09204 KLF1; krueppel-like factor 1
D 104308628 KLF2; Krueppel-like factor 2 K17845 KLF2; krueppel-like factor 2
D 104296717 KLF3; Krueppel-like factor 3 K15605 KLF3; krueppel-like factor 3
D 104306002 Krueppel-like factor 4 K17846 KLF4; krueppel-like factor 4
D 104297830 Krueppel-like factor 5 isoform X1 K09206 KLF5; krueppel-like factor 5
D 104309443 KLF5; Krueppel-like factor 5 K09206 KLF5; krueppel-like factor 5
D 104298924 KLF7; Krueppel-like factor 7 K09207 KLF6_7; krueppel-like factor 6/7
D 104297055 KLF6; Krueppel-like factor 6 isoform X1 K09207 KLF6_7; krueppel-like factor 6/7
D 104309432 KLF12; Krueppel-like factor 12 K09205 KLF8_12; krueppel-like factor 8/12
D 104309883 KLF13; Krueppel-like factor 13 K09208 KLF9S; krueppel-like factor 9/13/14/16
D 104298162 KLF10; Krueppel-like factor 10 K09209 KLF10_11; krueppel-like factor 10/11
D 104296119 Krueppel-like factor 15 K09210 KLF15; krueppel-like factor 15
D 104304779 Krueppel-like factor 15 K09210 KLF15; krueppel-like factor 15
D 104296518 KLF15; Krueppel-like factor 15 K09210 KLF15; krueppel-like factor 15
D 104301853 EGR1; early growth response protein 1 isoform X1 K09203 EGR1; early growth response protein 1
D 104297812 EGR3; early growth response protein 3 K12497 EGR3; early growth response protein 3
D 104307657 EGR4; early growth response protein 4 K12498 EGR4; early growth response protein 4
D 104296689 WT1; Wilms tumor protein isoform X1 K09234 WT1; Wilms tumor protein 1
D 104300489 ZFX; zinc finger X-chromosomal protein K27541 ZFX_Y; zinc finger X/Y-chromosomal protein
C Cys2His2 GLI-like
D 104304833 zinc finger protein GLI1-like K16797 GLI1; zinc finger protein GLI1
D 104309767 GLI2; zinc finger protein GLI2 K16798 GLI2; zinc finger protein GLI2
D 104304043 GLI3; transcriptional activator GLI3 K06230 GLI3; zinc finger protein GLI3
D 104299639 GLIS3; zinc finger protein GLIS3 K09232 GLIS1_3; zinc finger protein GLIS1/3
D 104307015 GLIS1; zinc finger protein GLIS1 K09232 GLIS1_3; zinc finger protein GLIS1/3
D 104300293 GLIS2; LOW QUALITY PROTEIN: zinc finger protein GLIS2 K09233 GLIS2; zinc finger protein GLIS2
D 104296486 ZIC1; zinc finger protein ZIC 1 K09224 ZIC1; zinc finger protein ZIC 1
D 104309087 ZIC2; zinc finger protein ZIC 2 K06235 ZIC2; zinc finger protein ZIC 2
D 104303646 ZIC3; zinc finger protein ZIC 3 K18487 ZIC3; zinc finger protein ZIC 3
D 104296487 ZIC4; zinc finger protein ZIC 4 K09225 ZIC4; zinc finger protein ZIC 4
C Cys2His2 Snail
D 104302670 SNAI1; zinc finger protein SNAI1 K05707 SNAI1; snail 1
D 104303088 SNAI2; zinc finger protein SNAI2 K05706 SNAI2; snail 2
D 104304945 SCRT1; transcriptional repressor scratch 1 K09219 SCRT; scratch
D 104301430 SCRT2; transcriptional repressor scratch 2 K09219 SCRT; scratch
C Cys2His2 BTB-ZF factors
D 104302999 ZBTB1; zinc finger and BTB domain-containing protein 1 isoform X1 K10488 ZBTB1; zinc finger and BTB domain-containing protein 1
D 104297156 ZBTB2; zinc finger and BTB domain-containing protein 2 K10489 ZBTB2; zinc finger and BTB domain-containing protein 2
D 104304318 ZBTB5; zinc finger and BTB domain-containing protein 5 K10492 ZBTB5; zinc finger and BTB domain-containing protein 5
D 104303241 ZBTB7A; zinc finger and BTB domain-containing protein 7A K10494 ZBTB7; zinc finger and BTB domain-containing protein 7
D 104301328 ZBTB7C; zinc finger and BTB domain-containing protein 7C K10494 ZBTB7; zinc finger and BTB domain-containing protein 7
D 104307370 zinc finger and BTB domain-containing protein 8A-like K10495 ZBTB8; zinc finger and BTB domain-containing protein 8
D 104307371 LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 8A-like K10495 ZBTB8; zinc finger and BTB domain-containing protein 8
D 104307460 ZBTB8B; zinc finger and BTB domain-containing protein 8B K10495 ZBTB8; zinc finger and BTB domain-containing protein 8
D 104297110 ZBTB11; zinc finger and BTB domain-containing protein 11 K10498 ZBTB11; zinc finger and BTB domain-containing protein 11
D 104309398 ZBTB14; zinc finger and BTB domain-containing protein 14 K24804 ZBTB14; zinc finger and BTB domain-containing protein 14
D 104307261 ZBTB16; zinc finger and BTB domain-containing protein 16 K10055 ZBTB16; zinc finger and BTB domain-containing protein 16
D 104309963 ZBTB17; zinc finger and BTB domain-containing protein 17 K10500 ZBTB17; zinc finger and BTB domain-containing protein 17
D 104307072 ZBTB20; zinc finger and BTB domain-containing protein 20 K10501 ZBTB20; zinc finger and BTB domain-containing protein 20
D 104305016 ZBTB21; zinc finger and BTB domain-containing protein 21 isoform X1 K24805 ZBTB21; zinc finger and BTB domain-containing protein 21
D 104296609 ZBTB24; zinc finger and BTB domain-containing protein 24 K10503 ZBTB24; zinc finger and BTB domain-containing protein 24
D 104303016 ZBTB25; zinc finger and BTB domain-containing protein 25 K10504 ZBTB25; zinc finger and BTB domain-containing protein 25
D 104301190 ZBTB33; transcriptional regulator Kaiso K10507 ZBTB33; zinc finger and BTB domain-containing protein 33
D 104306517 ZBTB34; zinc finger and BTB domain-containing protein 34 K10508 ZBTB34; zinc finger and BTB domain-containing protein 34
D 104299233 ZNF131; zinc finger protein 131 K24806 ZBTB35; zinc finger and BTB domain-containing protein 35
D 104305590 LOW QUALITY PROTEIN: zinc finger protein 131-like K24806 ZBTB35; zinc finger and BTB domain-containing protein 35
D 104308010 ZBTB37; zinc finger and BTB domain-containing protein 37 K10509 ZBTB37; zinc finger and BTB domain-containing protein 37
D 104300641 ZBTB38; zinc finger and BTB domain-containing protein 38 K10510 ZBTB38; zinc finger and BTB domain-containing protein 38
D 104305516 ZBTB39; zinc finger and BTB domain-containing protein 39 K10511 ZBTB39; zinc finger and BTB domain-containing protein 39
D 104303672 ZBTB41; zinc finger and BTB domain-containing protein 41 K10513 ZBTB41; zinc finger and BTB domain-containing protein 41
D 104306518 ZBTB43; zinc finger and BTB domain-containing protein 43 K10514 ZBTB43; zinc finger and BTB domain-containing protein 43
D 104305601 ZBTB44; zinc finger and BTB domain-containing protein 44 K10515 ZBTB44; zinc finger and BTB domain-containing protein 44
D 104301387 ZBTB46; zinc finger and BTB domain-containing protein 46 K10517 ZBTB46; zinc finger and BTB domain-containing protein 46
D 104298106 ZBTB47; zinc finger and BTB domain-containing protein 47 K10518 ZBTB47; zinc finger and BTB domain-containing protein 47
D 104303553 ZBTB49; zinc finger and BTB domain-containing protein 49 K24807 ZBTB49; zinc finger and BTB domain-containing protein 49
D 104304027 ZBTB42; zinc finger and BTB domain-containing protein 42 K23196 ZBTB18_42; zinc finger and BTB domain-containing protein 18/42
D 104300603 ZBTB18; zinc finger and BTB domain-containing protein 18 isoform X1 K23196 ZBTB18_42; zinc finger and BTB domain-containing protein 18/42
D 104298606 GZF1; LOW QUALITY PROTEIN: GDNF-inducible zinc finger protein 1 K22402 GZF1; GDNF-inducible zinc finger protein 1
D 104302939 BCL6; B-cell lymphoma 6 protein K15618 BCL6; B-cell lymphoma 6 protein
D 104309628 PATZ1; POZ-, AT hook-, and zinc finger-containing protein 1 K24383 PATZ1; POZ-AT hook zinc finger protein 1
D 104307790 VEZF1; vascular endothelial zinc finger 1 K26610 VEZF1; vascular endothelial zinc finger 1
D 104302835 HIC1; hypermethylated in cancer 1 protein K24384 HIC; hypermethylated in cancer protein
D 104309643 HIC2; hypermethylated in cancer 2 protein K24384 HIC; hypermethylated in cancer protein
D 104301921 MYNN; myoneurin isoform X1 K24385 MYNN; myoneurin
C Cys2His2 BED
D 104302132 ZBED1; zinc finger BED domain-containing protein 1 K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
D 104308081 ZBED4; zinc finger BED domain-containing protein 4 K24640 ZBED4; zinc finger BED domain-containing protein 4
C Cys2His2 PRDM
D 104296597 PRDM1; PR domain zinc finger protein 1 K24501 PRDM1; PR domain zinc finger protein 1 [EC:2.1.1.-]
D 104305821 PRDM2; PR domain zinc finger protein 2 K11432 PRDM2; [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
D 104301922 MDS1 and EVI1 complex locus protein EVI1 isoform X1 K04462 MECOM; [histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:2.1.1.367]
D 104307310 PRDM4; PR domain zinc finger protein 4 K12463 PRDM4; PR domain zinc finger protein 4 [EC:2.1.1.-]
D 104296209 PRDM5; PR domain zinc finger protein 5 K22534 PRDM5; PR domain zinc finger protein 5 [EC:2.1.1.-]
D 104300379 PRDM6; putative histone-lysine N-methyltransferase PRDM6 K20795 PRDM6; [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361]
D 104297710 ZNF488; zinc finger protein 488 K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-]
D 104305604 PRDM10; PR domain zinc finger protein 10 K24643 PRDM10; PR domain zinc finger protein 10 [EC:2.1.1.-]
D 104305566 PRDM11; PR domain-containing protein 11 K24644 PRDM11; PR domain zinc finger protein 11 [EC:2.1.1.-]
D 104298081 PRDM13; PR domain zinc finger protein 13 K24645 PRDM13; PR domain zinc finger protein 13 [EC:2.1.1.-]
D 104303494 PRDM14; PR domain zinc finger protein 14 K24646 PRDM14; PR domain zinc finger protein 14 [EC:2.1.1.-]
D 104305043 PRDM15; PR domain zinc finger protein 15 K24647 PRDM15; PR domain zinc finger protein 15 [EC:2.1.1.-]
D 104309927 PRDM16; PR domain zinc finger protein 16 K22410 PRDM16; [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367]
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
D 104298155 OSR2; LOW QUALITY PROTEIN: protein odd-skipped-related 2 K09215 OSR; odd-skipped
D 104308282 OSR1; protein odd-skipped-related 1 K09215 OSR; odd-skipped
D 104305334 OVOL2; transcription factor Ovo-like 2 K09216 OVOL; ovo
D 104298166 IKZF3; LOW QUALITY PROTEIN: zinc finger protein Aiolos K09220 IKZF; IKAROS family zinc finger protein
D 104309131 IKZF5; zinc finger protein Pegasus K09220 IKZF; IKAROS family zinc finger protein
D 104309285 IKZF2; zinc finger protein Helios isoform X1 K09220 IKZF; IKAROS family zinc finger protein
D 104305669 IKZF1; DNA-binding protein Ikaros isoform X1 K09220 IKZF; IKAROS family zinc finger protein
D 104298085 REST; RE1-silencing transcription factor K09222 REST; RE1-silencing transcription factor
D 104308661 GFI1; zinc finger protein Gfi-1 K09223 GFI1; growth factor independent 1
D 104296398 GFI1B; zinc finger protein Gfi-1b K09223 GFI1; growth factor independent 1
D 104302222 TSHZ1; teashirt homolog 1 K09236 TSHZ; teashirt
D 104302660 TSHZ2; teashirt homolog 2 K09236 TSHZ; teashirt
D 104307833 TSHZ3; teashirt homolog 3 K09236 TSHZ; teashirt
D 104298066 HIVEP1; zinc finger protein 40 K09239 HIVEP; human immunodeficiency virus type I enhancer-binding protein
D 104310059 HIVEP3; transcription factor HIVEP3 K09239 HIVEP; human immunodeficiency virus type I enhancer-binding protein
D 104301034 HIVEP2; transcription factor HIVEP2 isoform X1 K09239 HIVEP; human immunodeficiency virus type I enhancer-binding protein
D 104302310 AEBP2; zinc finger protein AEBP2 K17452 AEBP2; zinc finger protein AEBP2
D 104303484 PLAG1; zinc finger protein PLAG1 isoform X1 K19484 PLAG1; zinc finger protein PLAG1
D 104301048 PLAGL1; zinc finger protein PLAGL1 K19485 PLAGL1; zinc finger protein PLAGL1
D 104301447 PLAGL2; zinc finger protein PLAGL2 K19486 PLAGL2; zinc finger protein PLAGL2
D 104297245 RREB1; ras-responsive element-binding protein 1 K20210 RREB1; ras-responsive element-binding protein 1
D 104305955 BCL11A; LOW QUALITY PROTEIN: B-cell lymphoma/leukemia 11A K22045 BCL11A; B-cell lymphoma/leukemia 11A
D 104304513 BCL11B; B-cell lymphoma/leukemia 11B isoform X1 K22046 BCL11B; B-cell lymphoma/leukemia 11B
D 104300308 E4F1; transcription factor E4F1 K22401 E4F1; transcription factor E4F1 / E3 ubiquitin-protein ligase [EC:2.3.2.27]
D 104303039 CTCF; transcriptional repressor CTCF K23195 CTCF; transcriptional repressor CTCF
D 104307345 MTF1; metal regulatory transcription factor 1 K23317 MTF1; metal regulatory transcription factor 1
D 104297358 BNC1; zinc finger protein basonuclin-1 K24146 BNC; zinc finger protein basonuclin
D 104309526 BNC2; zinc finger protein basonuclin-2 K24146 BNC; zinc finger protein basonuclin
D 104306113 GTF3A; transcription factor IIIA K09191 GTF3A; general transcription factor IIIA
D 104304655 YY1; transcriptional repressor protein YY1 K09201 YY; transcription factor YY
D 104302767 RPA1; LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit K07466 RFA1; replication factor A1
D 104309747 ZNF142; LOW QUALITY PROTEIN: zinc finger protein 142 K24851 ZNF142; zinc finger protein 142
D 104303724 ZNF148; zinc finger protein 148 K24370 ZNF148; zinc finger protein 148
D 104306609 ZNF292; LOW QUALITY PROTEIN: zinc finger protein 292 K26728 ZNF292; zinc finger protein 292
D 104301479 ZNF335; LOW QUALITY PROTEIN: zinc finger protein 335 K24371 ZNF335; zinc finger protein 335
D 104302716 ZNF341; zinc finger protein 341 K24852 ZNF341; zinc finger protein 341
D 104299444 ZNF384; LOW QUALITY PROTEIN: zinc finger protein 384 K23480 ZNF362_384; zinc finger protein 362/384
D 104305594 LOW QUALITY PROTEIN: zinc finger protein 362-like K23480 ZNF362_384; zinc finger protein 362/384
D 104302223 ZNF407; zinc finger protein 407 K26729 ZNF407; Zinc finger protein 407
D 104308204 ZNF410; zinc finger protein 410 K25858 ZNF410; zinc finger protein 410
D 104303141 ZNF423; zinc finger protein 423 K22870 ZNF423; zinc finger protein 423
D 104310284 ZNF462; zinc finger protein 462 K24853 ZNF462; zinc finger protein 462
D 104302221 ZNF516; zinc finger protein 516 K22411 ZNF516; zinc finger protein 516
D 104303976 ZNF521; zinc finger protein 521 K24916 ZNF521; zinc finger protein 521
D 104307853 ZNF536; zinc finger protein 536 K27242 ZNF536; zinc finger protein 536
D 104300109 ZNF644; zinc finger protein 644 K24374 ZNF644; zinc finger protein 644
D 104301028 ZNF687; zinc finger protein 687 K24375 ZNF687; zinc finger protein 687
D 104297004 ZNF711; zinc finger protein 711 isoform X1 K24376 ZNF711; zinc finger protein 711
D 104297893 ZNF750; zinc finger protein 750 K24377 ZNF750; zinc finger protein 750
D 104299214 zinc finger protein 586-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 104299219 LOW QUALITY PROTEIN: zinc finger protein 282-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 104308981 zinc finger protein 271-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 104309101 gastrula zinc finger protein XlCGF57.1-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 104306307 zinc finger protein 239-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 104303127 FEZF1; fez family zinc finger protein 1 K24502 FEZF; Fez family zinc finger protein
D 104305852 CASZ1; LOW QUALITY PROTEIN: zinc finger protein castor homolog 1 K25209 CASZ1; zinc finger protein castor
D 104300653 HINFP; histone H4 transcription factor K25794 HINFP; histone H4 transcription factor
C Cys2HisCys zinc factors
D 104306810 MYT1; LOW QUALITY PROTEIN: myelin transcription factor 1 K23192 MYT1; myelin transcription factor 1
D 104301670 MYT1L; myelin transcription factor 1-like protein K23193 MYT1L; myelin transcription factor 1-like protein
D 104303084 ST18; suppression of tumorigenicity 18 protein K24386 ST18; suppression of tumorigenicity 18 protein
D 104303839 ZFPM1; LOW QUALITY PROTEIN: zinc finger protein ZFPM1 K17441 ZFPM1; zinc finger protein ZFPM1
D 104298170 ZFPM2; zinc finger protein ZFPM2 K17442 ZFPM2; zinc finger protein ZFPM2
D 104299916 KAT7; histone acetyltransferase KAT7 K11307 MYST2; histone acetyltransferase MYST2 [EC:2.3.1.48]
D 104301244 KAT6A; histone acetyltransferase KAT6A isoform X1 K11305 MYST3; histone acetyltransferase MYST3 [EC:2.3.1.48]
D 104297665 KAT6B; histone acetyltransferase KAT6B K11306 MYST4; histone acetyltransferase MYST4 [EC:2.3.1.48]
D 104304489 lethal(3)malignant brain tumor-like protein 1 K24387 L3MBTL; lethal(3)malignant brain tumor-like protein
D 104304630 L3MBTL3; lethal(3)malignant brain tumor-like protein 3 K24387 L3MBTL; lethal(3)malignant brain tumor-like protein
D 104309308 lethal(3)malignant brain tumor-like protein 4 K24387 L3MBTL; lethal(3)malignant brain tumor-like protein
D 104301999 L3MBTL2; lethal(3)malignant brain tumor-like protein 2 K24387 L3MBTL; lethal(3)malignant brain tumor-like protein
D 104303552 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein
C Cys3His zinc factors
D 104308012 RC3H1; roquin-1 K15690 RC3H; RING finger and CCCH-type zinc finger domain-containing protein
D 104306501 RC3H2; roquin-2 K15690 RC3H; RING finger and CCCH-type zinc finger domain-containing protein
D 104298426 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
C Cys2CysHis zinc factors
D 104307691 THAP1; THAP domain-containing protein 1 K23203 THAP1_3; THAP domain-containing protein 1/3
D 104303065 THAP5; THAP domain-containing protein 5 K23206 THAP5_8; THAP domain-containing protein 5/8
C CXXC CpG-binding proteins
D 104307283 KMT2A; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2A K09186 MLL1; [histone H3]-lysine4 N-trimethyltransferase MLL1 [EC:2.1.1.354]
D 104302631 CXXC5; CXXC-type zinc finger protein 5 K22760 CXXC5; CXXC-type zinc finger protein 5
D 104306168 TET1; methylcytosine dioxygenase TET1 K13097 TET1; methylcytosine dioxygenase [EC:1.14.11.80]
D 104301807 TET2; methylcytosine dioxygenase TET2 K24309 TET2_3; methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
D 104308400 KDM2B; lysine-specific demethylase 2B isoform X1 K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
D 104304458 KDM2A; LOW QUALITY PROTEIN: lysine-specific demethylase 2A K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
D 104303606 PHF6; PHD finger protein 6 isoform X1 K23310 PHF6; PHD finger protein 6
D 104306492 PHF19; PHD finger protein 19 K11486 PHF19; PHD finger protein 19
D 104308665 MTF2; metal-response element-binding transcription factor 2 isoform X1 K11485 MTF2; metal regulatory transcription factor 2
D 104298313 NFX1; transcriptional repressor NF-X1 K12236 NFX1; transcriptional repressor NF-X1
D 104297591 RAI1; LOW QUALITY PROTEIN: retinoic acid-induced protein 1 K19749 RAI1; retinoic acid-induced protein 1
D 104301894 CNBP; cellular nucleic acid-binding protein isoform X1 K09250 CNBP; cellular nucleic acid-binding protein
D 104306366 ZC4H2; zinc finger C4H2 domain-containing protein K24369 ZC4H2; zinc finger C4H2 domain-contaning protein
D 104301980 TCF20; transcription factor 20 isoform X1 K24769 TCF20; transcription factor 20
D 104308215 IRF2BPL; interferon regulatory factor 2-binding protein-like K22383 IRF2BP; interferon regulatory factor 2-binding protein
B Helix-turn-helix
C Homeo domain ANTP: HOXL
D 104299727 HOXB9; homeobox protein Hox-B9 K09294 HOX_9; homeobox protein HoxB/C/D9
D 104304666 HOXC9; homeobox protein Hox-C9 K09294 HOX_9; homeobox protein HoxB/C/D9
D 104305764 homeobox protein Hox-D9a-like K09294 HOX_9; homeobox protein HoxB/C/D9
D 104307629 HOXA10; homeobox protein Hox-A10 K17443 HOXA10; homrobox protein Hox-A10
D 104304668 HOXC10; homeobox protein Hox-C10 K17444 HOXC10; homrobox protein Hox-C10
D 104305740 HOXD10; homeobox protein Hox-D10 K09295 HOXD10; homrobox protein Hox-D10
D 104307630 HOXA11; homeobox protein Hox-A11 K21951 HOXA11; homeobox protein Hox-A11
D 104304669 HOXC11; homeobox protein Hox-C11 K09296 HOX_11; homeobox protein HoxC/D11
D 104305741 HOXD11; homeobox protein Hox-D11 K09296 HOX_11; homeobox protein HoxC/D11
D 104304670 HOXC12; homeobox protein Hox-C12 K09297 HOX_12; homeobox protein HoxC/D12
D 104305743 HOXD12; homeobox protein Hox-D12 K09297 HOX_12; homeobox protein HoxC/D12
D 104307645 HOXA13; homeobox protein Hox-A13 K09298 HOX_13; homeobox protein HoxA/B/C/D13
D 104299737 HOXB13; homeobox protein Hox-B13 K09298 HOX_13; homeobox protein HoxA/B/C/D13
D 104304671 HOXC13; LOW QUALITY PROTEIN: homeobox protein Hox-C13 K09298 HOX_13; homeobox protein HoxA/B/C/D13
D 104305765 HOXD13; homeobox protein Hox-D13 K09298 HOX_13; homeobox protein HoxA/B/C/D13
D 104307643 HOXA1; homeobox protein Hox-A1 K09301 HOX_1; homeobox protein HoxA/B/D1
D 104299720 HOXB1; homeobox protein Hox-B1 K09301 HOX_1; homeobox protein HoxA/B/D1
D 104307621 HOXA2; homeobox protein Hox-A2 K09302 HOX_2; homeobox protein HoxA/B2
D 104299734 HOXB2; homeobox protein Hox-B2 K09302 HOX_2; homeobox protein HoxA/B2
D 104307622 HOXA3; homeobox protein Hox-A3 K09303 HOX_3; homeobox protein HoxA/B/D3
D 104299721 HOXB3; LOW QUALITY PROTEIN: homeobox protein Hox-B3 K09303 HOX_3; homeobox protein HoxA/B/D3
D 104305762 HOXD3; homeobox protein Hox-D3 K09303 HOX_3; homeobox protein HoxA/B/D3
D 104307623 HOXA4; homeobox protein Hox-A4 K09304 HOX_4; homeobox protein HoxA/B/C/D4
D 104299722 HOXB4; homeobox protein Hox-B4 K09304 HOX_4; homeobox protein HoxA/B/C/D4
D 104305739 HOXD4; homeobox protein Hox-D4 K09304 HOX_4; homeobox protein HoxA/B/C/D4
D 104297600 HOXC5; homeobox protein Hox-C5 K09305 HOX_5; homeobox protein HoxA/B/C5
D 104307626 HOXA5; homeobox protein Hox-A5 K09305 HOX_5; homeobox protein HoxA/B/C5
D 104299735 HOXB5; homeobox protein Hox-B5 K09305 HOX_5; homeobox protein HoxA/B/C5
D 104307625 HOXA6; homeobox protein Hox-A6 K09306 HOX_6; homeobox protein HoxA/B/C6
D 104299723 HOXB6; LOW QUALITY PROTEIN: homeobox protein Hox-B6 K09306 HOX_6; homeobox protein HoxA/B/C6
D 104307628 HOXA7; homeobox protein Hox-A7 K09307 HOX_7; homeobox protein HoxA/B7
D 104299726 HOXB7; homeobox protein Hox-B7 K09307 HOX_7; homeobox protein HoxA/B7
D 104299724 HOXB8; homeobox protein Hox-B8 isoform X1 K09308 HOX_8; homeobox protein HoxB/C/D8
D 104304665 HOXC8; homeobox protein Hox-C8 K09308 HOX_8; homeobox protein HoxB/C/D8
D 104305763 HOXD8; homeobox protein Hox-D8 K09308 HOX_8; homeobox protein HoxB/C/D8
D 104299130 GSX2; LOW QUALITY PROTEIN: GS homeobox 2 K09310 GSH; homeobox protein GSH
D 104306115 GSX1; GS homeobox 1 K09310 GSH; homeobox protein GSH
D 104306116 PDX1; pancreas/duodenum homeobox protein 1 K07594 IPF1; insulin promoter factor 1
D 104300131 CDX4; homeobox protein CDX-4 K09312 CDX1_4; homeobox protein CDX1/4
D 104300148 homeobox protein CDX-4-like K09312 CDX1_4; homeobox protein CDX1/4
D 104310001 CDX1; homeobox protein CDX-1 K09312 CDX1_4; homeobox protein CDX1/4
D 104307631 EVX1; homeobox even-skipped homolog protein 1 K09320 EVX; homeobox even-skipped homolog protein
D 104305766 EVX2; homeobox even-skipped homolog protein 2 K09320 EVX; homeobox even-skipped homolog protein
D 104298509 GBX1; LOW QUALITY PROTEIN: homeobox protein GBX-1 K09321 GBX; homeobox protein GBX
D 104300542 GBX2; homeobox protein GBX-2 K09321 GBX; homeobox protein GBX
D 104302549 MEOX2; homeobox protein MOX-2 K09322 MEOX; homeobox protein MOX
D 104300558 MEOX1; homeobox protein MOX-1 K09322 MEOX; homeobox protein MOX
C Homeo domain ANTP: NKL
D 104301098 NKX2-1; homeobox protein Nkx-2.1 K09342 NKX2-1; homeobox protein Nkx-2.1
D 104304474 NKX2-2; LOW QUALITY PROTEIN: homeobox protein Nkx-2.2 K08029 NKX2-2; homeobox protein Nkx-2.2
D 104303941 NKX2-5; homeobox protein Nkx-2.5 K09345 NKX2-5; homeobox protein Nkx-2.5
D 104297820 NKX2-6; homeobox protein Nkx-2.6 K09346 NKX2-6; homeobox protein Nkx-2.6
D 104297818 NKX3-1; homeobox protein Nkx-3.1 K09348 NKX3-1; homeobox protein Nkx-3.1
D 104301245 NKX6-3; homeobox protein Nkx-6.3 K09351 NKX6-3; homeobox protein Nkx-6.3
D 104303172 DLX6; homeobox protein DLX-6 K09314 DLX1_4_6; homeobox protein DLX1/4/6
D 104304734 DLX1; homeobox protein DLX-1 K09314 DLX1_4_6; homeobox protein DLX1/4/6
D 104309068 DLX3; homeobox protein DLX-3 K09315 DLX3; homeobox protein DLX3
D 104303170 DLX5; homeobox protein DLX-5 K18489 DLX5; homeobox protein DLX5
D 104307090 TLX1; T-cell leukemia homeobox protein 1 K09340 TLX1; T-cell leukemia homeobox protein 1
D 104299880 HLX; H2.0-like homeobox protein K09339 HLX1; homeobox protein HLX1
D 104308251 EMX2; homeobox protein EMX2 K09317 EMX; homeobox protein EMX
D 104308635 EMX1; homeobox protein EMX1 K09317 EMX; homeobox protein EMX
D 104308256 VAX1; ventral anterior homeobox 1 K09318 VAX; homeobox protein ventral anterior
D 104298546 EN2; homeobox protein engrailed-2 K09319 EN; homeobox protein engrailed
D 104303588 MSX1; homeobox protein MSX-1 K09341 MSX; homeobox protein MSX
D 104304009 MSX2; homeobox protein MSX-2 K09341 MSX; homeobox protein MSX
D 104308908 LBX2; transcription factor LBX2 K09353 LBX; homeobox protein LBX
D 104297795 HHEX; hematopoietically-expressed homeobox protein HHEX K08024 HHEX; homeobox protein HEX
D 104300108 BARHL2; LOW QUALITY PROTEIN: barH-like 2 homeobox protein K09360 BARHL; BarH-like
D 104296467 BARHL1; barH-like 1 homeobox protein K09360 BARHL; BarH-like
D 104304635 BARX1; homeobox protein BarH-like 1 K09361 BARX; BarH-like homeobox
D 104305608 BARX2; LOW QUALITY PROTEIN: homeobox protein BarH-like 2 K09361 BARX; BarH-like homeobox
D 104305620 BSX; brain-specific homeobox protein homolog K24874 BSX; brain-specific homeobox protein
D 104308595 NOTO; homeobox protein notochord K24876 NOTO; homeobox protein notochord
D 104308604 homeobox protein not2-like K24876 NOTO; homeobox protein notochord
D 104307129 VENTX; homeobox protein VENTX K24877 VENTX; homeobox protein VENTX
D 104307131 homeobox protein vent1-like K24877 VENTX; homeobox protein VENTX
C Homeo domain Paired-related
D 104297452 ALX4; homeobox protein aristaless-like 4 K09451 ALX4; homeobox protein aristaless-like 4
D 104309683 GSC2; homeobox protein goosecoid-2 K09325 GSCL; homeobox protein goosecoid-like
D 104307233 OTX2; homeobox protein OTX2 isoform X1 K18490 OTX2; homeobox protein OTX2
D 104296441 PRRX2; paired mesoderm homeobox protein 2 K09329 PRRX; paired mesoderm homeobox protein
D 104301612 PRRX1; paired mesoderm homeobox protein 1 K09329 PRRX; paired mesoderm homeobox protein
D 104309415 PHOX2B; paired mesoderm homeobox protein 2B K09330 PHOX2; paired mesoderm homeobox protein 2
D 104308784 SHOX2; LOW QUALITY PROTEIN: short stature homeobox protein 2 K09331 SHOX; short stature homeobox protein
D 104302140 SHOX; short stature homeobox protein K09331 SHOX; short stature homeobox protein
D 104308257 RAX2; retina and anterior neural fold homeobox protein 2 K09332 RAX; retina and anterior neural fold homeobox protein
D 104306258 RAX; retinal homeobox protein Rx K09332 RAX; retina and anterior neural fold homeobox protein
D 104301115 ALX1; ALX homeobox protein 1 K09334 ALX1; ALX homeobox protein 1
D 104300931 visual system homeobox 1-like K09335 VSX1; visual system homeobox protein 1
D 104308243 VSX2; visual system homeobox 2 K09336 VSX2; visual system homeobox protein 2
D 104310205 PITX1; pituitary homeobox 1 K09356 PITX1; paired-like homeodomain transcription factor 1
D 104304149 PITX2; pituitary homeobox 2 isoform X1 K04686 PITX2; paired-like homeodomain transcription factor 2
D 104297689 PITX3; pituitary homeobox 3 K09357 PITX3; paired-like homeodomain transcription factor 3
D 104308799 HESX1; homeobox expressed in ES cells 1 K09354 HESX1; homeobox protein expressed in ES cells 1
D 104301582 DMBX1; diencephalon/mesencephalon homeobox protein 1 isoform X1 K24893 DMBX1; diencephalon/mesencephalon homeobox protein 1
D 104297719 DRGX; dorsal root ganglia homeobox protein K24895 DRGX; dorsal root ganglia homeobox protein
D 104298107 HOPX; homeodomain-only protein K24897 HOPX; homeodomain-only protein
D 104302117 ISX; intestine-specific homeobox K24898 ISX; intestine-specific homeobox
D 104301102 PAX9; paired box protein Pax-9 K09382 PAX1_9; paired box protein 1/9
D 104297769 PAX2; paired box protein Pax-2 K15608 PAX2; paired box protein 2
D 104297645 PAX3; paired box protein Pax-3 isoform X1 K09381 PAX3_7; paired box protein 3/7
D 104299334 PAX7; paired box protein Pax-7 K09381 PAX3_7; paired box protein 3/7
D 104304912 PAX4; paired box protein Pax-4 K08032 PAX4; paired box protein 4
D 104301019 PAX6; LOW QUALITY PROTEIN: paired box protein Pax-6 K08031 PAX6; paired box protein 6
C Homeo domain LIM
D 104306974 ISL1; insulin gene enhancer protein ISL-1 K09370 ISL1; insulin gene enhancer protein ISL-1
D 104298438 ISL2; insulin gene enhancer protein ISL-2 K18492 ISL2; insulin gene enhancer protein ISL-2
D 104301540 LMX1A; LOW QUALITY PROTEIN: LIM homeobox transcription factor 1-alpha K09371 LMX1; LIM homeobox transcription factor 1
D 104306516 LMX1B; LIM homeobox transcription factor 1-beta isoform X1 K09371 LMX1; LIM homeobox transcription factor 1
D 104307783 LHX1; LIM/homeobox protein Lhx1 K09372 LHX1; LIM homeobox protein 1
D 104303673 LHX9; LIM/homeobox protein Lhx9 K09373 LHX2_9; LIM homeobox protein 2/9
D 104306505 LHX2; LIM/homeobox protein Lhx2 isoform X1 K09373 LHX2_9; LIM homeobox protein 2/9
D 104301591 LHX4; LIM/homeobox protein Lhx4 K09374 LHX3_4; LIM homeobox protein 3/4
D 104306541 LHX3; LIM/homeobox protein Lhx3 K09374 LHX3_4; LIM homeobox protein 3/4
D 104308450 LHX5; LIM/homeobox protein Lhx5 isoform X1 K18493 LHX5; LIM homeobox protein 5
D 104307912 LHX8; LIM/homeobox protein Lhx8 K09375 LHX6_8; LIM homeobox protein 6/8
D 104306551 LHX6; LIM/homeobox protein Lhx6 K09375 LHX6_8; LIM homeobox protein 6/8
D 104297512 CSRP3; cysteine and glycine-rich protein 3 K09377 CSRP; cysteine and glycine-rich protein
D 104299605 CSRP1; cysteine and glycine-rich protein 1 isoform X1 K09377 CSRP; cysteine and glycine-rich protein
D 104309214 CSRP2; cysteine and glycine-rich protein 2 isoform X1 K09377 CSRP; cysteine and glycine-rich protein
C Homeo domain POU
D 104298038 POU1F1; pituitary-specific positive transcription factor 1 isoform X1 K09363 POU1F; POU domain transcription factor, class 1
D 104299534 POU2F1; POU domain, class 2, transcription factor 1 isoform X1 K09364 POU2F; POU domain transcription factor, class 2
D 104301064 POU2F3; POU domain, class 2, transcription factor 3 K09364 POU2F; POU domain transcription factor, class 2
D 104298088 POU3F2; POU domain, class 3, transcription factor 2 K09365 POU3F; POU domain transcription factor, class 3
D 104307223 LOW QUALITY PROTEIN: brain-specific homeobox/POU domain protein 3-like K09366 POU4F; POU domain transcription factor, class 4
D 104296905 POU4F2; POU domain, class 4, transcription factor 2 K09366 POU4F; POU domain transcription factor, class 4
D 104300181 LOW QUALITY PROTEIN: POU domain, class 3, transcription factor 3-like K09367 POU5F; POU domain transcription factor, class 5
D 104304065 POU6F2; POU domain, class 6, transcription factor 2 K09368 POU6F; POU domain transcription factor, class 6
D 104297003 HDX; highly divergent homeobox K24884 HDX; highly divergent homeobox
D 104309624 HNF1A; hepatocyte nuclear factor 1-alpha K08036 TCF1; transcription factor 1, hepatocyte nuclear factor 1-alpha
D 104307779 HNF1B; hepatocyte nuclear factor 1-beta K08034 TCF2; transcription factor 2, hepatocyte nuclear factor 1-beta
D 104306735 HMBOX1; homeobox-containing protein 1 K24885 HMBOX1; homeobox-containing protein 1
C Homeo domain SINE
D 104303159 SIX1; homeobox protein SIX1 K15614 SIX1; homeobox protein SIX1
D 104303414 SIX2; homeobox protein SIX2 K19472 SIX2; homeobox protein SIX2
D 104303315 SIX6; homeobox protein SIX6 K19473 SIX3_6; homeobox protein SIX3/6
D 104303423 SIX3; homeobox protein SIX3 K19473 SIX3_6; homeobox protein SIX3/6
D 104303149 SIX4; homeobox protein SIX4 K15615 SIX4; homeobox protein SIX4
C Homeo domain ZF
D 104303803 ZFHX3; LOW QUALITY PROTEIN: zinc finger homeobox protein 3 K09378 ZFHX3; zinc finger homeobox protein 3
D 104300990 ZFHX4; zinc finger homeobox protein 4 K09380 ZFHX4; zinc finger homeobox protein 4
D 104298505 ZEB1; zinc finger E-box-binding homeobox 1 K09299 ZEB1; zinc finger homeobox protein 1
D 104306697 ZEB2; zinc finger E-box-binding homeobox 2 isoform X1 K23560 ZEB2; zinc finger homeobox protein 2
D 104302695 ADNP; activity-dependent neuroprotector homeobox protein K22591 ADNP; activity-dependent neuroprotector homeobox protein
D 104299591 ADNP2; ADNP homeobox protein 2 K24878 ADNP2; activity-dependent neuroprotector homeobox protein 2
D 104304970 ZHX1; zinc fingers and homeoboxes protein 1 K24879 ZHX1; zinc fingers and homeoboxes protein 1
D 104304998 ZHX2; zinc fingers and homeoboxes protein 2 K24880 ZHX2; zinc fingers and homeoboxes protein 2
D 104307577 ZHX3; zinc fingers and homeoboxes protein 3 K24881 ZHX3; zinc fingers and homeoboxes protein 3
C Homeo domain CUT
D 104308416 CUX2; LOW QUALITY PROTEIN: homeobox protein cut-like 2 K09313 CUTL; homeobox protein cut-like
D 104306310 CUX1; protein CASP K09313 CUTL; homeobox protein cut-like
D 104305586 ONECUT1; hepatocyte nuclear factor 6 K08026 ONECUT1; one cut domain, family member 1 (hepatocyte nuclear factor 6)
D 104308440 ONECUT3; one cut domain family member 3 K24171 ONECUT3; one cut domain family member 3
D 104309351 SATB1; DNA-binding protein SATB1 K23225 SATB1; DNA-binding protein SATB1
D 104309272 SATB2; DNA-binding protein SATB2 K23226 SATB2; DNA-binding protein SATB2
C Homeo domain PROS
D 104297568 PROX1; prospero homeobox protein 1 K20211 PROX1; prospero homeobox 1
D 104308233 PROX2; prospero homeobox protein 2 K20212 PROX2; prospero homeobox 2
C Homeo domain TALE
D 104301539 PBX1; LOW QUALITY PROTEIN: pre-B-cell leukemia transcription factor 1 K09355 PBX1; pre-B-cell leukemia transcription factor 1
D 104306513 PBX3; pre-B-cell leukemia transcription factor 3 K15610 PBX3; pre-B-cell leukemia transcription factor 3
D 104301027 MEIS1; homeobox protein Meis1 isoform X1 K15613 MEIS1; homeobox protein Meis1
D 104306846 MEIS2; homeobox protein Meis2 K16670 MEIS2; homeobox protein Meis2
D 104301080 TGIF1; homeobox protein TGIF1 K19383 TGIF1; homeobox protein TGIF1
D 104299021 IRX5; iroquois-class homeodomain protein IRX-5 K24889 IRX; iroquois-class homeodomain protein IRX
D 104299753 IRX1; iroquois-class homeodomain protein IRX-1 K24889 IRX; iroquois-class homeodomain protein IRX
D 104299756 IRX4; LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-4 K24889 IRX; iroquois-class homeodomain protein IRX
D 104299757 IRX2; iroquois-class homeodomain protein IRX-2 K24889 IRX; iroquois-class homeodomain protein IRX
D 104298490 MKX; homeobox protein Mohawk K24890 MKX; homeobox protein Mohawk
D 104305010 PKNOX1; homeobox protein PKNOX1 K24891 PKNOX; homeobox protein PKNOX
C Homeo domain other
C Fork head/winged helix developmental regulators
D 104298600 FOXA2; LOW QUALITY PROTEIN: hepatocyte nuclear factor 3-beta K08035 FOXA2; forkhead box protein A2, hepatocyte nuclear factor 3-beta
D 104303850 FOXC2; forkhead box protein C2 K09396 FOXC; forkhead box protein C
D 104310294 FOXG1; forkhead box protein G1 K09385 FOXG; forkhead box protein G
D 104302847 FOXN1; forkhead box protein N1 K09407 FOXN; forkhead box protein N
D 104308429 FOXN4; forkhead box protein N4 K09407 FOXN; forkhead box protein N
D 104304120 FOXN3; forkhead box protein N3 isoform X1 K09407 FOXN; forkhead box protein N
D 104305079 FOXN2; forkhead box protein N2 isoform X1 K09407 FOXN; forkhead box protein N
C Fork head/winged helix tissue-specific regulators
D 104301096 FOXA1; hepatocyte nuclear factor 3-alpha K09387 FOXA1; forkhead box protein A1, hepatocyte nuclear factor 3-alpha
D 104298016 FOXJ1; forkhead box protein J1 K09402 FOXJ1; forkhead box protein J1
C Fork head/winged helix cell cycle-controlling factors, E2F
D 104302736 E2F1; transcription factor E2F1 K17454 E2F1; transcription factor E2F1
D 104304217 transcription factor E2F2-like K09389 E2F2; transcription factor E2F2
D 104305771 E2F3; transcription factor E2F3 K06620 E2F3; transcription factor E2F3
D 104309206 E2F5; transcription factor E2F5 K04682 E2F4_5; transcription factor E2F4/5
D 104299855 E2F4; transcription factor E2F4 K04682 E2F4_5; transcription factor E2F4/5
D 104308316 E2F6; transcription factor E2F6 K09390 E2F6; transcription factor E2F6
D 104297565 E2F8; transcription factor E2F8 K09391 E2F7_8; transcription factor E2F7/8
D 104309215 E2F7; transcription factor E2F7 K09391 E2F7_8; transcription factor E2F7/8
C Fork head/winged helix cell cycle-controlling factors, DP
D 104298632 TFDP1; transcription factor Dp-1 K04683 TFDP1; transcription factor Dp-1
D 104300638 TFDP2; transcription factor Dp-2 isoform X1 K09392 TFDP2; transcription factor Dp-2
C Fork head/winged helix other regulators
D 104309887 FOXB1; forkhead box protein B1 K09395 FOXB; forkhead box protein B
D 104307919 FOXE3; forkhead box protein E3 K09398 FOXE; forkhead box protein E
D 104303213 FOXF2; forkhead box protein F2 K09399 FOXF; forkhead box protein F
D 104303848 FOXF1; forkhead box protein F1 K09399 FOXF; forkhead box protein F
D 104299044 FOXI1; forkhead box protein I1 isoform X1 K09401 FOXI; forkhead box protein I
D 104296813 FOXJ2; forkhead box protein J2 K09403 FOXJ2_3; forkhead box protein J2/3
D 104297705 FOXK1; forkhead box protein K1 K09404 FOXK; forkhead box protein K
D 104297895 FOXK2; forkhead box protein K2 K09404 FOXK; forkhead box protein K
D 104303851 FOXL1; forkhead box protein L1 K09405 FOXL; forkhead box protein L
D 104304099 FOXL2; forkhead box protein L2 K09405 FOXL; forkhead box protein L
D 104296808 FOXM1; forkhead box protein M1 K09406 FOXM; forkhead box protein M
D 104307599 FOXO1; forkhead box protein O1 K07201 FOXO1; forkhead box protein O1
D 104296630 FOXO3; forkhead box protein O3 K09408 FOXO3; forkhead box protein O3
D 104296355 FOXO4; forkhead box protein O4 K12358 FOXO4; forkhead box protein O4
D 104307978 FOXP1; LOW QUALITY PROTEIN: forkhead box protein P1 K23582 FOXP1; forkhead box protein P1
D 104309188 FOXP2; forkhead box protein P2 isoform X1 K09409 FOXP2_4; forkhead box protein P2/4
D 104305389 FOXP4; forkhead box protein P4 K09409 FOXP2_4; forkhead box protein P2/4
D 104307290 FOXR1; forkhead box protein R1 K26215 FOXR; forkhead box protein R
C Heat shock factors
D 104297207 HSF1; heat shock factor protein 1 K09414 HSF1; heat shock transcription factor 1
D 104308342 HSF2; heat shock factor protein 2 K09415 HSF2; heat shock transcription factor 2
D 104306369 heat shock factor protein 3-like K09416 HSF3; heat shock transcription factor 3
D 104299008 HSF4; heat shock factor protein 4 K09417 HSF4; heat shock transcription factor 4
C Tryptophan clusters Myb, Myb-factors
D 104310015 MYB; transcriptional activator Myb K09420 MYB; transcriptional activator Myb
D 104303467 MYBL1; myb-related protein A K09421 MYBL1; myb-related protein A
D 104301495 MYBL2; myb-related protein B K21769 MYBL2; myb-related protein B
C Tryptophan clusters Myb, Myb-like factors
D 104306536 SNAPC4; snRNA-activating protein complex subunit 4 K09453 SNAPC4; snRNA-activating protein complex subunit 4
D 104300041 DMTF1; cyclin-D-binding Myb-like transcription factor 1 K21625 DMTF1; cyclin-D-binding Myb-like transcription factor 1
C Tryptophan clusters Ets-type
D 104309390 ELF1; LOW QUALITY PROTEIN: ETS-related transcription factor Elf-1 K09428 ELF1_2_4; E74-like factor 1/2/4
D 104296871 ELF2; LOW QUALITY PROTEIN: ETS-related transcription factor Elf-2 K09428 ELF1_2_4; E74-like factor 1/2/4
D 104309262 ELF3; ETS-related transcription factor Elf-3 K09429 K09429; E74-like factor 3
D 104302563 EHF; ETS homologous factor isoform X1 K17102 EHF; ETS homologous factor
D 104299185 ELK3; ETS domain-containing protein Elk-3 K09430 ELK3; ETS domain-containing protein Elk-3 (SRF accessory protein 2)
D 104304778 ELK4; ETS domain-containing protein Elk-4 K04376 ELK4; ETS domain-containing protein Elk-4
D 104298814 ETV1; ETS translocation variant 1 isoform X1 K09431 ETV1; ets translocation variant 1
D 104300564 ETV4; ETS translocation variant 4 K15592 ETV4; ets translocation variant 4
D 104299296 ETV5; LOW QUALITY PROTEIN: ETS translocation variant 5 K15593 ETV5; ets translocation variant 5
D 104304521 ETV6; transcription factor ETV6 K03211 ETV6_7; ETS translocation variant 6/7
D 104310235 ETV7; LOW QUALITY PROTEIN: transcription factor ETV7 K03211 ETV6_7; ETS translocation variant 6/7
D 104305611 ETS1; protein C-ets-1 isoform X1 K02678 ETS1; C-ets-1
D 104305020 ETS2; protein C-ets-2 K21932 ETS2; C-ets-2
D 104305022 ERG; transcriptional regulator ERG isoform X1 K09435 ERG; transcriptional regulator ERG
D 104305619 FLI1; LOW QUALITY PROTEIN: Friend leukemia integration 1 transcription factor K09436 FLI1; friend leukemia integration 1 transcription factor
D 104309803 FEV; protein FEV K09437 FEV; ETS oncogene family protein FEV
D 104297428 SPI1; transcription factor PU.1 isoform X1 K09438 SPI1; transcription factor PU.1
D 104296555 SPIC; transcription factor Spi-C K09440 SPIC; transcription factor Spi-C
D 104304891 GABPA; GA-binding protein alpha chain K09441 GABPA; GA-binding protein transcription factor, alpha
D 104305376 SPDEF; SAM pointed domain-containing Ets transcription factor K09442 SPDEF; SAM pointed domain-containing ETS transcription factor
C Tryptophan clusters interferon-regulating factors
D 104297033 IRF1; interferon regulatory factor 1 K09444 IRF1; interferon regulatory factor 1
D 104309538 IRF2; interferon regulatory factor 2 K10153 IRF2; interferon regulatory factor 2
D 104303202 IRF4; interferon regulatory factor 4 K09445 IRF4; interferon regulatory factor 4
D 104301440 interferon regulatory factor 4-like K09445 IRF4; interferon regulatory factor 4
D 104300047 IRF5; interferon regulatory factor 5 K09446 IRF5; interferon regulatory factor 5
D 104296466 IRF6; LOW QUALITY PROTEIN: interferon regulatory factor 6 K10154 IRF6; interferon regulatory factor 6
D 104303792 IRF8; interferon regulatory factor 8 K10155 IRF8; interferon regulatory factor 8
C TEA domain
D 104305339 TEAD3; transcriptional enhancer factor TEF-5 isoform X1 K09448 TEAD; transcriptional enhancer factor
D 104296678 TEAD1; transcriptional enhancer factor TEF-1 isoform X1 K09448 TEAD; transcriptional enhancer factor
D 104296806 TEAD4; transcriptional enhancer factor TEF-3 K09448 TEAD; transcriptional enhancer factor
C ARID
D 104307401 ARID1A; AT-rich interactive domain-containing protein 1A K11653 ARID1; AT-rich interactive domain-containing protein 1
D 104306235 ARID1B; AT-rich interactive domain-containing protein 1B K11653 ARID1; AT-rich interactive domain-containing protein 1
D 104299119 ARID2; LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2 K11765 ARID2; AT-rich interactive domain-containing protein 2
D 104307819 ARID3C; AT-rich interactive domain-containing protein 3C K25856 ARID3; AT-rich interactive domain-containing protein 3
D 104300588 ARID3A; AT-rich interactive domain-containing protein 3A K25856 ARID3; AT-rich interactive domain-containing protein 3
D 104310196 ARID3B; AT-rich interactive domain-containing protein 3B K25856 ARID3; AT-rich interactive domain-containing protein 3
D 104307227 ARID4A; AT-rich interactive domain-containing protein 4A K19194 ARID4A; AT-rich interactive domain-containing protein 4A
D 104305632 ARID4B; AT-rich interactive domain-containing protein 4B K19195 ARID4B; AT-rich interactive domain-containing protein 4B
D 104303076 ARID5A; AT-rich interactive domain-containing protein 5A K25857 ARID5; AT-rich interactive domain-containing protein 5
D 104305266 ARID5B; AT-rich interactive domain-containing protein 5B K25857 ARID5; AT-rich interactive domain-containing protein 5
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
D 104307765 NFKB1; nuclear factor NF-kappa-B p105 subunit K02580 NFKB1; nuclear factor NF-kappa-B p105 subunit
D 104297767 NFKB2; nuclear factor NF-kappa-B p100 subunit K04469 NFKB2; nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
D 104305956 REL; proto-oncogene c-Rel K09254 REL; c-Rel proto-oncogene protein
C RHR (Rel homology region) Ankyrin only
D 104302476 NFKBIA; NF-kappa-B inhibitor alpha K04734 NFKBIA; NF-kappa-B inhibitor alpha
D 104303458 NFKBID; LOW QUALITY PROTEIN: NF-kappa-B inhibitor delta K14214 NFKBID; NF-kappa-B inhibitor delta
D 104299962 NFKBIE; NF-kappa-B inhibitor epsilon K05872 NFKBIE; NF-kappa-B inhibitor epsilon
D 104297090 NFKBIZ; NF-kappa-B inhibitor zeta isoform X1 K14242 NFKBIZ; NF-kappa-B inhibitor zeta
D 104297348 GABPB1; GA-binding protein subunit beta-1 K09454 GABPB; GA-binding protein transcription factor, beta
C RHR (Rel homology region) NF-AT
D 104302693 NFATC2; nuclear factor of activated T-cells, cytoplasmic 2 K17332 NFATC2; nuclear factor of activated T-cells, cytoplasmic 2
D 104299023 NFATC3; nuclear factor of activated T-cells, cytoplasmic 3 K17333 NFATC3; nuclear factor of activated T-cells, cytoplasmic 3
D 104303758 NFAT5; LOW QUALITY PROTEIN: nuclear factor of activated T-cells 5 K17335 NFAT5; nuclear factor of activated T-cells 5
C STAT
D 104309847 STAT1; signal transducer and activator of transcription 1-alpha/beta K11220 STAT1; signal transducer and activator of transcription 1
D 104309596 STAT3; signal transducer and activator of transcription 3 K04692 STAT3; signal transducer and activator of transcription 3
D 104309848 STAT4; signal transducer and activator of transcription 4 K11222 STAT4; signal transducer and activator of transcription 4
D 104309595 LOW QUALITY PROTEIN: signal transducer and activator of transcription 5B-like K11224 STAT5B; signal transducer and activator of transcription 5B
C p53
D 104309931 TP73; tumor protein p73 K10148 TP73; tumor protein p73
D 104300717 TP63; tumor protein 63 isoform X1 K10149 TP63; tumor protein p63
C MADS-box regulators of differentiation, MEF-2
D 104298883 MEF2A; myocyte-specific enhancer factor 2A isoform X1 K09260 MEF2A; MADS-box transcription enhancer factor 2A
D 104300770 myocyte-specific enhancer factor 2B-like K09261 MEF2B; MADS-box transcription enhancer factor 2B
D 104299886 MEF2C; myocyte-specific enhancer factor 2C isoform X1 K04454 MEF2C; MADS-box transcription enhancer factor 2C
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
D 104300908 SRF; serum response factor K04378 SRF; serum response factor
C SAND domain-containing proteins
D 104309995 autoimmune regulator-like K10603 AIRE; autoimmune regulator
D 104299826 DEAF1; deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
D 104304209 GMEB1; glucocorticoid modulatory element-binding protein 1 isoform X1 K24505 GMEB; glucocorticoid modulatory element-binding protein
D 104301232 GMEB2; LOW QUALITY PROTEIN: glucocorticoid modulatory element-binding protein 2 K24505 GMEB; glucocorticoid modulatory element-binding protein
C TATA-binding proteins
D 104307234 TBPL2; TATA box-binding protein-like protein 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D 104296116 TATA box-binding protein-like protein 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D 104305464 TBP; TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D 104306968 TBPL1; TATA box-binding protein-like protein 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C HMG SOX
D 104306344 transcription factor SOX-3-like isoform X1 K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B)
D 104296828 SOX14; transcription factor SOX-14 K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B)
D 104303032 SOX2; transcription factor SOX-2 K16796 SOX2; transcription factor SOX2 (SOX group B)
D 104298647 SOX1; transcription factor SOX-1 K16796 SOX2; transcription factor SOX2 (SOX group B)
D 104305751 SOX4; transcription factor SOX-4 K23581 SOX4; transcription factor SOX4 (SOX group C)
D 104298599 SOX11; transcription factor SOX-11 K09268 SOX11_12; transcription factor SOX11/12 (SOX group C)
D 104304397 SOX6; transcription factor SOX-6 K09269 SOX5_6_13; transcription factor SOX5/6/13 (SOX group D)
D 104305329 SOX5; transcription factor SOX-5 isoform X1 K09269 SOX5_6_13; transcription factor SOX5/6/13 (SOX group D)
D 104305357 SOX13; LOW QUALITY PROTEIN: transcription factor SOX-13 K09269 SOX5_6_13; transcription factor SOX5/6/13 (SOX group D)
D 104297416 SOX8; LOW QUALITY PROTEIN: transcription factor SOX-8 K09270 SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)
D 104301395 SOX18; transcription factor SOX-18 K09270 SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)
D 104306763 SOX7; transcription factor SOX-7 K09270 SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)
D 104302031 SOX10; transcription factor SOX-10 K09270 SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)
D 104297860 SOX9; transcription factor SOX-9 K18435 SOX9; transcription factor SOX9 (SOX group E)
D 104303910 SOX30; transcription factor SOX-30 K09271 SOX15_30; transcription factor SOX15/30
D 104297086 BBX; HMG box transcription factor BBX K21643 BBX; HMG box transcription factor BBX
D 104308925 HBP1; HMG box-containing protein 1 K21644 HBP1; HMG box transcription factor 1
C HMG TCF-1
D 104301797 LEF1; LOW QUALITY PROTEIN: lymphoid enhancer-binding factor 1 K04492 LEF1; lymphoid enhancer-binding factor 1
D 104310141 TCF7; transcription factor 7 K02620 TCF7; transcription factor 7
D 104307193 TCF7L2; transcription factor 7-like 2 K04491 TCF7L2; transcription factor 7-like 2
C HMG2-related
D 104297534 SSRP1; FACT complex subunit SSRP1 K09272 SSRP1; FACT complex subunit SSRP1/POB3
C UBF
D 104309229 UBTF; LOW QUALITY PROTEIN: nucleolar transcription factor 1 K09273 UBTF; upstream-binding transcription factor
C Other HMG box factors
C Heteromeric CCAAT factors
D 104307298 NFYB; nuclear transcription factor Y subunit beta K08065 NFYB; nuclear transcription Y subunit beta
D 104307365 NFYC; nuclear transcription factor Y subunit gamma isoform X1 K08066 NFYC; nuclear transcription factor Y, gamma
C Grainyhead
D 104307390 GRHL3; grainyhead-like protein 3 homolog K09275 TFCP2; transcription factor CP2 and related proteins
D 104298153 GRHL2; grainyhead-like protein 2 homolog K09275 TFCP2; transcription factor CP2 and related proteins
D 104298880 UBP1; upstream-binding protein 1 isoform X1 K09275 TFCP2; transcription factor CP2 and related proteins
D 104299655 GRHL1; grainyhead-like protein 1 homolog K09275 TFCP2; transcription factor CP2 and related proteins
D 104309768 TFCP2L1; transcription factor CP2-like protein 1 K09275 TFCP2; transcription factor CP2 and related proteins
C Cold-shock domain factors, DbpA-like
D 104299489 YBX3; Y-box-binding protein 3 K06099 CSDA; cold shock domain protein A
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
D 104304940 RUNX1; runt-related transcription factor 1 isoform X1 K08367 RUNX1; runt-related transcription factor 1
D 104304566 RUNX2; runt-related transcription factor 2 K09278 RUNX2; runt-related transcription factor 2
D 104307487 RUNX3; runt-related transcription factor 3 K09279 RUNX3; runt-related transcription factor 3
C MYRF
D 104299798 MYRF; myelin regulatory factor K24768 MYRF; myelin regulatory factor [EC:3.4.-.-]
B Other transcription factors
C HMGI(Y)
D 104305378 HMGA1; high mobility group protein HMG-I/HMG-Y K09282 HMGA1; high mobility group AT-hook protein 1
D 104301112 HMGA2; high mobility group protein HMGI-C K09283 HMGA2; high mobility group AT-hook protein 2
C NUPR
E Line #4
C Pocket domain Rb
D 104305425 RB1; retinoblastoma-associated protein K06618 RB1; retinoblastoma-associated protein
D 104309064 RBL1; retinoblastoma-like protein 1 K04681 RBL1; retinoblastoma-like protein 1
D 104303150 RBL2; retinoblastoma-like protein 2 K16332 RBL2; retinoblastoma-like protein 2
C Pocket domain CBP
D 104300296 CREBBP; CREB-binding protein K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48]
D 104302083 EP300; LOW QUALITY PROTEIN: histone acetyltransferase p300 K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48]
C T-box
D 104301520 T; brachyury protein K10172 BRA; brachyury protein
D 104298277 EOMES; eomesodermin homolog K10173 EOMES; eomesodermin protein
D 104309781 TBR1; T-box brain protein 1 K10174 TBR1; T-box brain protein 1
D 104309703 TBX1; T-box transcription factor TBX1 K10175 TBX1; T-box protein 1
D 104302305 TBX2; T-box transcription factor TBX2 K10176 TBX2; T-box protein 2
D 104308452 TBX3; T-box transcription factor TBX3 isoform X1 K10177 TBX3; T-box protein 3
D 104302296 TBX4; T-box transcription factor TBX4 K10178 TBX4; T-box protein 4
D 104308550 TBX5; T-box transcription factor TBX5 K10179 TBX5; T-box protein 5
D 104309618 LOW QUALITY PROTEIN: T-box-containing protein TBX6L-like K10180 TBX6; T-box protein 6
D 104299805 TBX10; T-box transcription factor TBX10 K10181 TBX10; T-box protein 10
D 104302922 TBX15; T-box transcription factor TBX15 K10182 TBX15; T-box protein 15
D 104305899 TBX18; T-box transcription factor TBX18 K10183 TBX18; T-box protein 18
D 104306903 TBX19; T-box transcription factor TBX19 K10184 TBX19; T-box protein 19
D 104299667 TBX20; T-box transcription factor TBX20 K10185 TBX20; T-box protein 20
D 104297016 TBX22; T-box transcription factor TBX22 K10186 TBX22; T-box protein 22
C DMRT
D 104301376 DMRT1; doublesex- and mab-3-related transcription factor 1 K19488 DMRT1; doublesex- and mab-3-related transcription factor 1
D 104301374 DMRT2; doublesex- and mab-3-related transcription factor 2 K19489 DMRT2; doublesex- and mab-3-related transcription factor 2
D 104301375 DMRT3; doublesex- and mab-3-related transcription factor 3 K19490 DMRT3; doublesex- and mab-3-related transcription factor 3
D 104307923 DMRTA2; doublesex- and mab-3-related transcription factor A2 K19491 DMRT4_5; doublesex- and mab-3-related transcription factor 4/5
D 104307045 DMRTB1; LOW QUALITY PROTEIN: doublesex- and mab-3-related transcription factor B1 K19492 DMRT6; doublesex- and mab-3-related transcription factor 6
C LRRFIP
D 104300547 LRRFIP1; leucine-rich repeat flightless-interacting protein 1 K26434 LRRFIP; leucine-rich repeat flightless-interacting protein
D 104304051 LRRFIP2; leucine-rich repeat flightless-interacting protein 2 isoform X1 K26434 LRRFIP; leucine-rich repeat flightless-interacting protein
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
D 104298947 CARF; LOW QUALITY PROTEIN: calcium-responsive transcription factor K21595 CARF; calcium-responsive transcription factor
D 104309896 CAMTA1; calmodulin-binding transcription activator 1 K21596 CAMTA; calmodulin-binding transcription activator
D 104302283 GCM2; chorion-specific transcription factor GCMb K21598 GCM; chorion-specific transcription factor GCM
D 104303545 GCM1; chorion-specific transcription factor GCMa K21598 GCM; chorion-specific transcription factor GCM
D 104305687 TMEM18; transmembrane protein 18 K22145 TMEM18; transmembrane protein 18
D 104302816 CHCHD2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial K22758 CHCHD2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2
D 104307583 RBPJL; recombining binding protein suppressor of hairless-like protein K06053 RBPSUH; recombining binding protein suppressor of hairless
D 104304158 RBPJ; recombining binding protein suppressor of hairless K06053 RBPSUH; recombining binding protein suppressor of hairless
D 104310277 GON-4-like protein K23804 GON4L; GON-4-like protein
D 104304649 PURA; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
D 104297380 MYEF2; myelin expression factor 2 K24992 MYEF2; myelin expression factor 2
D 104305753 CDCA7; cell division cycle-associated protein 7 K23408 CDCA7; cell division cycle-associated protein 7
D 104306294 CDCA7L; cell division cycle-associated 7-like protein K23408 CDCA7; cell division cycle-associated protein 7
D 104301187 NKRF; NF-kappa-B-repressing factor K26458 NKRF; NF-kappa-B-repressing factor
#
AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
C DeoR family
C LacI family
C GntR family
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
C MerR family
C Fur family
C IclR family
C CRP/FNR family
C Rrf2 family
C ArsR family
C XRE family
C PadR family
C Other families
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
#
Classification taken and modified from TRANSFAC 7.0