+D GENES KO
#
KEGG Orthology (KO) - Deinococcus rubellus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:drb00010]
D N0D28_00145 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_05520 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D N0D28_06370 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D N0D28_09935 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D N0D28_09925 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D N0D28_09930 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D N0D28_03315 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D N0D28_01835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D N0D28_01840 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D N0D28_13700 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D N0D28_13705 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_09630 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_13880 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D N0D28_14345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:drb00020]
D N0D28_04390 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D N0D28_11310 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D N0D28_06780 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D N0D28_04485 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D N0D28_04490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_11670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D N0D28_11665 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D N0D28_14485 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D N0D28_14480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D N0D28_14495 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D N0D28_14490 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D N0D28_06640 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D N0D28_14345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D N0D28_13700 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D N0D28_13705 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:drb00030]
D N0D28_04265 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D N0D28_04275 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D N0D28_04260 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D N0D28_06760 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D N0D28_13635 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D N0D28_00785 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D N0D28_14955 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D N0D28_07015 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D N0D28_11415 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D N0D28_02710 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D N0D28_14940 carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D N0D28_11510 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_05465 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D N0D28_12420 gluconokinase, GntK/IdnK-type K00851 idnK; gluconokinase [EC:2.7.1.12]
D N0D28_06370 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D N0D28_05520 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:drb00040]
D N0D28_13635 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D N0D28_05925 rhaI; L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D N0D28_05935 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
C 00051 Fructose and mannose metabolism [PATH:drb00051]
D N0D28_13395 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D N0D28_06885 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D N0D28_05925 rhaI; L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D N0D28_05935 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_05520 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D N0D28_06370 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D N0D28_09935 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:drb00052]
D N0D28_09630 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_00145 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D N0D28_14845 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_06480 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D N0D28_13520 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:drb00500]
D N0D28_06480 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D N0D28_13325 alpha-amylase family glycosyl hydrolase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D N0D28_13675 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D N0D28_00025 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D N0D28_09165 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D N0D28_03355 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D N0D28_13990 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D N0D28_07045 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D N0D28_01915 pulA; pullulanase-type alpha-1,6-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41]
D N0D28_14390 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D N0D28_08095 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D N0D28_13755 glycoside hydrolase family 15 protein K01178 SGA1; glucoamylase [EC:3.2.1.3]
D N0D28_05960 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D N0D28_14370 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D N0D28_14380 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D N0D28_14375 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_00145 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D N0D28_13395 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:drb00520]
D N0D28_15345 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D N0D28_00880 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D N0D28_12325 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D N0D28_13395 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D N0D28_12330 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D N0D28_14360 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D N0D28_12165 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D N0D28_06600 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D N0D28_10750 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D N0D28_14435 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D N0D28_01435 ROK family protein K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D N0D28_01870 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D N0D28_06290 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D N0D28_10070 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D N0D28_10075 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D N0D28_10080 acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D N0D28_00145 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D N0D28_13880 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_14845 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D N0D28_06885 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D N0D28_09165 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:drb00620]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_13700 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D N0D28_13705 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_09980 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D N0D28_10060 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D N0D28_01840 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D N0D28_01905 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D N0D28_10870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D N0D28_10865 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D N0D28_01900 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D N0D28_10050 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D N0D28_13790 thiamine pyrophosphate-requiring protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D N0D28_04325 alpha-hydroxy-acid oxidizing protein K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D N0D28_02065 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D N0D28_09405 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D N0D28_06640 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D N0D28_07705 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D N0D28_14345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_08080 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D N0D28_09395 lysS; homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:drb00630]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D N0D28_04390 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D N0D28_11310 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_01490 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D N0D28_11775 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D N0D28_04335 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D N0D28_04340 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D N0D28_14750 catalase K03781 katE; catalase [EC:1.11.1.6]
D N0D28_09970 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D N0D28_09515 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09520 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D N0D28_05765 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D N0D28_05755 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_05760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D N0D28_04820 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D N0D28_07680 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D N0D28_05045 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:drb00640]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_09980 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D N0D28_10060 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_05075 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D N0D28_01905 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D N0D28_10870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D N0D28_10865 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D N0D28_01900 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D N0D28_10890 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D N0D28_01490 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D N0D28_11775 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D N0D28_11665 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D N0D28_11670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D N0D28_06435 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:drb00650]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_14620 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D N0D28_14865 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D N0D28_07740 enoyl-CoA hydratase-related protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D N0D28_12370 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D N0D28_14485 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D N0D28_14480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D N0D28_14495 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D N0D28_14490 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D N0D28_10890 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D N0D28_13415 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D N0D28_13410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:drb00660]
D N0D28_13415 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D N0D28_13410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D N0D28_11665 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D N0D28_11670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D N0D28_13445 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D N0D28_13435 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D N0D28_13430 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:drb00562]
D N0D28_05400 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D N0D28_08545 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D N0D28_09935 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:drb00190]
D N0D28_10695 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D N0D28_10690 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D N0D28_10685 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D N0D28_10680 nuoD; NADH dehydrogenase (quinone) subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D N0D28_10670 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D N0D28_10665 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D N0D28_10660 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D N0D28_10655 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D N0D28_10650 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D N0D28_10645 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D N0D28_10640 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D N0D28_10635 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D N0D28_10630 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D N0D28_10625 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D N0D28_11245 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D N0D28_14485 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D N0D28_14480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D N0D28_14495 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D N0D28_14490 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D N0D28_13715 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D N0D28_10515 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D N0D28_07765 b(o/a)3-type cytochrome-c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D N0D28_13740 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D N0D28_10505 cbb3-type cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D N0D28_10510 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D N0D28_13745 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D N0D28_10520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D N0D28_06030 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D N0D28_06035 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D N0D28_06020 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D N0D28_06040 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D N0D28_06015 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D N0D28_06025 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D N0D28_06005 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D N0D28_06010 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D N0D28_14045 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D N0D28_15035 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:drb00710]
D N0D28_09930 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D N0D28_09925 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D N0D28_06370 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D N0D28_05520 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D N0D28_00785 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D N0D28_07015 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D N0D28_09935 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D N0D28_13635 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D N0D28_14955 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D N0D28_07705 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D N0D28_14345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:drb00720]
D N0D28_07705 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D N0D28_06640 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D N0D28_14485 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D N0D28_14480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D N0D28_14495 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D N0D28_14490 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D N0D28_11670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D N0D28_11665 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_06780 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D N0D28_11310 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D N0D28_01905 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D N0D28_10870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D N0D28_10865 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D N0D28_01900 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D N0D28_01490 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D N0D28_11775 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D N0D28_09030 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D N0D28_11450 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D N0D28_10060 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D N0D28_09980 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:drb00680]
D N0D28_04820 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D N0D28_09170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D N0D28_09970 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D N0D28_01835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D N0D28_07705 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D N0D28_06370 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D N0D28_05520 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_09980 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D N0D28_10060 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_03315 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D N0D28_10965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D N0D28_13640 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D N0D28_07410 3-isopropylmalate dehydratase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D N0D28_11260 homoaconitate hydratase K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
C 00910 Nitrogen metabolism [PATH:drb00910]
D N0D28_10455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D N0D28_10155 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_10160 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_09515 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09520 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_01760 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:drb00920]
D N0D28_14205 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D N0D28_14250 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D N0D28_14210 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D N0D28_14215 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D N0D28_14200 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D N0D28_14190 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D N0D28_01640 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D N0D28_14195 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D N0D28_14185 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D N0D28_07635 DoxX family membrane protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D N0D28_02965 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D N0D28_05655 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D N0D28_14720 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D N0D28_07880 alpha/beta fold hydrolase family protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D N0D28_14650 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:drb00061]
D N0D28_01905 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D N0D28_10870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D N0D28_10865 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D N0D28_01900 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D N0D28_06075 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D N0D28_06060 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D N0D28_12140 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D N0D28_06055 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D N0D28_06080 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D N0D28_04035 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_06070 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_00225 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D N0D28_00835 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D N0D28_00915 acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D N0D28_02085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:drb00071]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_14855 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D N0D28_14620 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D N0D28_14865 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D N0D28_08790 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D N0D28_11335 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D N0D28_02085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:drb00121]
D N0D28_05190 glucose 1-dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:drb00561]
D N0D28_01655 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D N0D28_02785 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D N0D28_01130 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D N0D28_11530 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D N0D28_01665 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D N0D28_06340 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D N0D28_14405 lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D N0D28_00215 UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:drb00564]
D N0D28_06280 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D N0D28_01650 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D N0D28_01130 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D N0D28_11530 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D N0D28_01665 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D N0D28_06340 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D N0D28_08970 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D N0D28_07600 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D N0D28_07595 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D N0D28_08945 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D N0D28_12795 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:drb00600]
D N0D28_07135 glucose 1-dehydrogenase K04708 KDSR; 3-dehydrosphinganine reductase [EC:1.1.1.102]
D N0D28_00880 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:drb00592]
D N0D28_14855 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:drb01040]
D N0D28_00915 acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:drb00230]
D N0D28_06540 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D N0D28_14885 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D N0D28_11510 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_05465 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D N0D28_06910 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D N0D28_08720 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D N0D28_10250 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D N0D28_06915 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D N0D28_06935 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D N0D28_06925 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D N0D28_11835 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D N0D28_12915 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D N0D28_12920 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D N0D28_06940 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D N0D28_05410 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D N0D28_11455 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D N0D28_14830 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D N0D28_08020 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D N0D28_01295 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D N0D28_00140 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D N0D28_06740 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D N0D28_02840 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D N0D28_12295 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D N0D28_12340 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D N0D28_10770 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D N0D28_09280 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D N0D28_04190 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D N0D28_11220 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D N0D28_00845 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D N0D28_15060 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D N0D28_15370 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D N0D28_15375 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D N0D28_13945 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D N0D28_02330 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D N0D28_06385 amidohydrolase family protein K01486 ade; adenine deaminase [EC:3.5.4.2]
D N0D28_14850 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D N0D28_07710 TIGR00282 family metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60]
D N0D28_03210 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D N0D28_09580 NUDIX hydrolase K18445 ndx1; diadenosine hexaphosphate hydrolase (ATP-forming) [EC:3.6.1.61]
D N0D28_14190 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D N0D28_14200 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:drb00240]
D N0D28_14275 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D N0D28_10540 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D N0D28_04420 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D N0D28_04415 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D N0D28_08615 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D N0D28_10780 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D N0D28_12400 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D N0D28_08935 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D N0D28_10770 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D N0D28_11410 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D N0D28_08895 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D N0D28_04235 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D N0D28_02315 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D N0D28_01295 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D N0D28_00140 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D N0D28_06300 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D N0D28_04425 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D N0D28_14850 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D N0D28_05440 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D N0D28_01890 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D N0D28_06330 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D N0D28_06405 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D N0D28_15060 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D N0D28_15370 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D N0D28_15375 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D N0D28_11365 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D N0D28_11710 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D N0D28_08765 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D N0D28_07710 TIGR00282 family metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:drb00250]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_04855 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D N0D28_09970 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D N0D28_13295 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D N0D28_10590 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D N0D28_10565 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D N0D28_02330 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D N0D28_05410 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D N0D28_04420 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D N0D28_10890 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D N0D28_10155 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_10160 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_10925 L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D N0D28_11675 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D N0D28_09515 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09520 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_14275 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D N0D28_10540 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D N0D28_06925 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D N0D28_12330 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D N0D28_14360 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D N0D28_06910 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:drb00260]
D N0D28_09835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D N0D28_11540 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D N0D28_10180 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D N0D28_07245 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D N0D28_07250 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D N0D28_14795 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D N0D28_09170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D N0D28_09970 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D N0D28_03315 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D N0D28_10965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D N0D28_05765 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D N0D28_05755 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_05760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D N0D28_07965 L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D N0D28_07970 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D N0D28_01520 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D N0D28_09705 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D N0D28_09955 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D N0D28_09960 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:drb00270]
D N0D28_14720 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D N0D28_11565 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D N0D28_14230 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D N0D28_12390 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D N0D28_05675 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D N0D28_02840 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D N0D28_08180 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D N0D28_07270 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D N0D28_09835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D N0D28_11540 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D N0D28_10180 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D N0D28_07880 alpha/beta fold hydrolase family protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D N0D28_07140 PLP-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D N0D28_07885 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_02965 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D N0D28_05655 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D N0D28_09705 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D N0D28_14115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D N0D28_07965 L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D N0D28_07970 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D N0D28_10965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:drb00280]
D N0D28_02320 NAD-binding protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_08790 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D N0D28_14855 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D N0D28_01490 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D N0D28_11775 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:drb00290]
D N0D28_01520 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D N0D28_13445 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D N0D28_13435 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D N0D28_13430 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D N0D28_13415 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D N0D28_13410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D N0D28_13405 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D N0D28_09715 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D N0D28_02320 NAD-binding protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D N0D28_08080 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:drb00300]
D N0D28_10180 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D N0D28_09835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D N0D28_11540 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D N0D28_10600 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D N0D28_07935 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D N0D28_09395 lysS; homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14]
D N0D28_07410 3-isopropylmalate dehydratase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D N0D28_11260 homoaconitate hydratase K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
D N0D28_12770 isocitrate/isopropylmalate dehydrogenase family protein K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87]
D N0D28_06365 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D N0D28_11270 lysW; lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D N0D28_11275 lysX; lysine biosynthesis protein LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D N0D28_08050 [LysW]-aminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D N0D28_07415 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D N0D28_04900 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D N0D28_14515 [LysW]-lysine hydrolase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
D N0D28_00940 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D N0D28_09145 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:drb00310]
D N0D28_04490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_11335 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_09705 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D N0D28_10895 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:drb00220]
D N0D28_11385 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D N0D28_10590 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D N0D28_10565 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D N0D28_13855 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D N0D28_06925 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D N0D28_09515 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09520 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_14275 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D N0D28_10540 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D N0D28_10155 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_10160 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_10550 N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D N0D28_00125 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D N0D28_00865 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D N0D28_11375 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D N0D28_11270 lysW; lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D N0D28_08050 [LysW]-aminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D N0D28_07415 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D N0D28_04900 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D N0D28_14515 [LysW]-lysine hydrolase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:drb00330]
D N0D28_10390 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D N0D28_15445 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D N0D28_15130 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D N0D28_04465 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_07660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_13855 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D N0D28_11475 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D N0D28_11685 proline dehydrogenase family protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D N0D28_10925 L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D N0D28_11675 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D N0D28_08825 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D N0D28_13650 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D N0D28_00760 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:drb00340]
D N0D28_11090 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D N0D28_11095 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D N0D28_05470 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D N0D28_00260 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D N0D28_13995 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D N0D28_05475 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D N0D28_14000 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D N0D28_02695 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D N0D28_06200 hisJ; histidinol-phosphatase HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D N0D28_11500 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:drb00350]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_02695 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:drb00360]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_02695 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D N0D28_04465 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_07660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_04715 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:drb00380]
D N0D28_04410 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D N0D28_07680 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D N0D28_07685 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D N0D28_04490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_11335 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_10455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D N0D28_04465 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_07660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_14750 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:drb00400]
D N0D28_06570 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D N0D28_11885 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D N0D28_06585 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D N0D28_05850 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D N0D28_05845 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D N0D28_05855 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D N0D28_12160 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D N0D28_05860 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D N0D28_09325 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D N0D28_09315 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D N0D28_09310 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D N0D28_01470 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D N0D28_12290 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D N0D28_09955 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D N0D28_09960 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D N0D28_14305 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D N0D28_04460 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_02695 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:drb00410]
D N0D28_10890 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D N0D28_09335 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:drb00430]
D N0D28_07775 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D N0D28_13295 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D N0D28_10060 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D N0D28_09980 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:drb00450]
D N0D28_11565 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D N0D28_14230 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D N0D28_11555 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D N0D28_14200 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D N0D28_08985 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:drb00460]
D N0D28_13675 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D N0D28_10455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D N0D28_07775 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D N0D28_04855 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D N0D28_09170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:drb00470]
D N0D28_15430 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D N0D28_13235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D N0D28_09705 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D N0D28_06925 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D N0D28_07920 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D N0D28_14415 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D N0D28_13070 enolase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D N0D28_09810 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D N0D28_07935 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:drb00480]
D N0D28_07775 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D N0D28_06780 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D N0D28_04260 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D N0D28_06760 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D N0D28_04265 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:drb00511]
D N0D28_00880 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D N0D28_00095 hypothetical protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:drb00541]
D N0D28_14845 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D N0D28_10310 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10350 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10315 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D N0D28_10305 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D N0D28_10300 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D N0D28_06885 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D N0D28_06600 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D N0D28_06290 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D N0D28_10070 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D N0D28_10075 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D N0D28_10080 acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:drb00550]
D N0D28_10750 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D N0D28_14435 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D N0D28_14430 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D N0D28_14415 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D N0D28_00940 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D N0D28_13235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D N0D28_09145 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D N0D28_07975 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D N0D28_09135 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D N0D28_14425 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D N0D28_05750 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D N0D28_11980 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:drb00552]
D N0D28_07975 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D N0D28_09160 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D N0D28_15460 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D N0D28_00215 UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:drb00543]
D N0D28_08400 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D N0D28_08395 hypothetical protein K19295 algJ; alginate O-acetyltransferase complex protein AlgJ
D N0D28_08405 alginate O-acetyltransferase AlgF K19296 algF; alginate O-acetyltransferase complex protein AlgF
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:drb00730]
D N0D28_05000 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D N0D28_05595 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D N0D28_04930 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D N0D28_03210 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:drb00740]
D N0D28_06535 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D N0D28_06540 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D N0D28_14885 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D N0D28_14905 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:drb00750]
D N0D28_08485 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D N0D28_01240 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D N0D28_15530 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D N0D28_07250 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D N0D28_09760 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D N0D28_09765 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:drb00760]
D N0D28_06740 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D N0D28_05730 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D N0D28_01295 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D N0D28_00140 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D N0D28_05705 bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D N0D28_06745 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D N0D28_05715 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D N0D28_01165 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D N0D28_12695 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:drb00770]
D N0D28_13415 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D N0D28_13410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D N0D28_13405 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D N0D28_09715 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D N0D28_10530 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D N0D28_09335 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D N0D28_05485 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D N0D28_02270 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D N0D28_09290 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D N0D28_09040 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D N0D28_14770 4'-phosphopantetheinyl transferase superfamily protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:drb00780]
D N0D28_06080 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D N0D28_04035 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_06070 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_00225 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D N0D28_00835 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D N0D28_01480 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:drb00785]
D N0D28_02170 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D N0D28_02165 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_13700 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D N0D28_13705 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D N0D28_04485 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D N0D28_04490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D N0D28_05765 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D N0D28_05755 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D N0D28_05760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:drb00790]
D N0D28_02335 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D N0D28_04985 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D N0D28_04990 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D N0D28_04980 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D N0D28_12925 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D N0D28_14040 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D N0D28_10365 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D N0D28_13865 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D N0D28_01710 molybdenum cofactor biosynthesis protein MoaE K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D N0D28_08660 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D N0D28_15160 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D N0D28_02770 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D N0D28_05310 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:drb00670]
D N0D28_09030 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D N0D28_11450 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D N0D28_09170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D N0D28_10250 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D N0D28_11455 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D N0D28_01550 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D N0D28_05755 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D N0D28_14230 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D N0D28_08765 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D N0D28_05045 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D N0D28_12875 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:drb00860]
D N0D28_07700 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_09965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_07090 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D N0D28_05620 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D N0D28_08840 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D N0D28_01325 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D N0D28_11745 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D N0D28_01395 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D N0D28_10515 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D N0D28_10520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D N0D28_01420 DR2241 family protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D N0D28_05955 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D N0D28_02245 sigma 54-interacting transcriptional regulator K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:drb00130]
D N0D28_02980 ubiA; putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D N0D28_14060 menaquinone biosynthesis decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D N0D28_14905 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D N0D28_13195 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D N0D28_06800 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D N0D28_06690 menaquinone biosynthesis protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D N0D28_06260 mqnE; aminofutalosine synthase MqnE K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D N0D28_09085 amidohydrolase family protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D N0D28_00805 mqnB; futalosine hydrolase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D N0D28_06685 CofH family radical SAM protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D N0D28_12195 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:drb00900]
D N0D28_05595 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D N0D28_08975 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D N0D28_14900 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D N0D28_14895 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D N0D28_02110 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D N0D28_07505 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D N0D28_06730 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_14905 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D N0D28_13335 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D N0D28_11845 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D N0D28_02920 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D N0D28_10165 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:drb00906]
D N0D28_09210 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D N0D28_09215 crtI; phytoene desaturase family protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:drb00907]
D N0D28_14855 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D N0D28_00785 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:drb00523]
D N0D28_10310 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10350 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10315 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D N0D28_10305 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D N0D28_10300 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D N0D28_10315 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:drb00946]
D N0D28_13675 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:drb00311]
D N0D28_01645 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D N0D28_02675 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:drb00332]
D N0D28_08825 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D N0D28_13650 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:drb00261]
D N0D28_14200 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D N0D28_09835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D N0D28_11540 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:drb00521]
D N0D28_00145 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D N0D28_05515 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D N0D28_05400 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D N0D28_08545 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D N0D28_10310 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10350 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10315 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D N0D28_10305 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D N0D28_10300 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D N0D28_00145 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:drb00525]
D N0D28_10310 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10350 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D N0D28_10315 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:drb00401]
D N0D28_14305 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_02695 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D N0D28_09325 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D N0D28_09315 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D N0D28_06060 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D N0D28_04035 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_06070 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_00835 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D N0D28_06075 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:drb00999]
D N0D28_12390 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D N0D28_13675 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:drb00362]
D N0D28_14855 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D N0D28_11905 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D N0D28_13290 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D N0D28_14620 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D N0D28_14865 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D N0D28_11335 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:drb00627]
D N0D28_04465 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_07660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_10455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D N0D28_10050 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D N0D28_14905 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:drb00364]
D N0D28_02340 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D N0D28_02350 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
D N0D28_06905 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:drb00361]
D N0D28_02340 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D N0D28_02350 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D N0D28_11905 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D N0D28_06905 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:drb00623]
D N0D28_02340 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D N0D28_02350 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:drb00622]
D N0D28_11905 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D N0D28_14855 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:drb00643]
D N0D28_04465 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_07660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D N0D28_10455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D N0D28_11905 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D N0D28_04625 acyl-CoA dehydrogenase family protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:drb03020]
D N0D28_04635 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D N0D28_04630 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D N0D28_03240 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D N0D28_02275 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:drb03010]
D N0D28_11545 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D N0D28_08925 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D N0D28_03135 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D N0D28_03235 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D N0D28_03190 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D N0D28_02550 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D N0D28_03080 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D N0D28_03175 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D N0D28_13960 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D N0D28_03100 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D N0D28_03230 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D N0D28_03075 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D N0D28_03225 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D N0D28_03170 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D N0D28_00960 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D N0D28_06620 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D N0D28_03150 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D N0D28_02560 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D N0D28_03125 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D N0D28_04435 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D N0D28_13380 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D N0D28_03120 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D N0D28_03105 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D N0D28_03110 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D N0D28_03165 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D N0D28_03180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D N0D28_13390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D N0D28_02565 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D N0D28_13385 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D N0D28_13375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D N0D28_13965 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D N0D28_03155 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D N0D28_03200 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D N0D28_03140 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D N0D28_03245 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D N0D28_03185 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D N0D28_13475 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D N0D28_01335 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D N0D28_03130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D N0D28_03115 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D N0D28_03160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D N0D28_10380 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D N0D28_01340 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D N0D28_07260 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D N0D28_03145 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D N0D28_03195 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D N0D28_07405 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D N0D28_11405 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D N0D28_13360 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D N0D28_12245 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D N0D28_13480 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D N0D28_03220 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D N0D28_01700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:drb00970]
D N0D28_12335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D N0D28_08105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D N0D28_01080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D N0D28_08645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_00980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_05110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_04080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_03970 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D N0D28_10385 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D N0D28_14125 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D N0D28_03360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D N0D28_01365 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D N0D28_11550 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D N0D28_10285 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D N0D28_11420 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D N0D28_04655 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_01695 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_07285 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_12755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_04070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_12900 tRNA-His K14226 tRNA-His; tRNA His
D N0D28_00120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D N0D28_02205 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_12905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_08715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_01315 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_02575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_12870 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D N0D28_06460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D N0D28_02955 tRNA-Met K14230 tRNA-Met; tRNA Met
D N0D28_05820 tRNA-Ile K14230 tRNA-Met; tRNA Met
D N0D28_13485 tRNA-Met K14230 tRNA-Met; tRNA Met
D N0D28_14130 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D N0D28_04065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D N0D28_04445 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D N0D28_15045 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D N0D28_00970 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D N0D28_10260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D N0D28_05230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D N0D28_04665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D N0D28_12615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D N0D28_04650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D N0D28_02050 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D N0D28_04660 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D N0D28_03365 tRNA-Val K14237 tRNA-Val; tRNA Val
D N0D28_11205 tRNA-Val K14237 tRNA-Val; tRNA Val
D N0D28_05815 tRNA-Val K14237 tRNA-Val; tRNA Val
D N0D28_07700 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_09965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_12280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D N0D28_07110 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D N0D28_13550 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D N0D28_01415 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D N0D28_06790 alanine--tRNA ligase-related protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D N0D28_09880 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D N0D28_08540 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D N0D28_09855 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D N0D28_07590 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D N0D28_05825 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D N0D28_13555 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D N0D28_14475 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D N0D28_08985 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D N0D28_01550 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D N0D28_08675 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D N0D28_14330 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D N0D28_09735 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D N0D28_09425 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D N0D28_09365 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D N0D28_04155 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D N0D28_09885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D N0D28_13825 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D N0D28_13840 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D N0D28_01845 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D N0D28_04835 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:drb03060]
D N0D28_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D N0D28_13365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D N0D28_08710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D N0D28_06115 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D N0D28_12230 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D N0D28_05240 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D N0D28_06465 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D N0D28_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D N0D28_05210 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D N0D28_06595 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D N0D28_06590 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D N0D28_04320 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D N0D28_05695 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D N0D28_09460 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D N0D28_07265 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:drb04122]
D N0D28_05000 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D N0D28_02965 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D N0D28_05655 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D N0D28_07940 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D N0D28_10365 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D N0D28_01710 molybdenum cofactor biosynthesis protein MoaE K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D N0D28_15080 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D N0D28_13865 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D N0D28_08660 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:drb03018]
D N0D28_01835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D N0D28_02045 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D N0D28_10850 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D N0D28_11345 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D N0D28_09745 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D N0D28_13200 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D N0D28_02515 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_04015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D N0D28_10465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D N0D28_15035 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D N0D28_08100 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:drb03030]
D N0D28_12750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D N0D28_02375 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D N0D28_05625 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D N0D28_08850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D N0D28_01830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D N0D28_07180 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D N0D28_13575 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D N0D28_02555 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D N0D28_13930 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D N0D28_07750 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D N0D28_07995 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D N0D28_09015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:drb03410]
D N0D28_00795 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D N0D28_07980 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D N0D28_11105 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D N0D28_04100 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D N0D28_02915 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D N0D28_09610 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D N0D28_08490 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D N0D28_02030 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D N0D28_09270 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D N0D28_11000 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D N0D28_14915 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D N0D28_07995 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D N0D28_06225 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D N0D28_09015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:drb03420]
D N0D28_09650 DEAD/DEAH box helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D N0D28_07535 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D N0D28_02395 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D N0D28_09995 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D N0D28_07620 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D N0D28_07995 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D N0D28_09015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:drb03430]
D N0D28_07395 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D N0D28_14960 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2
D N0D28_07400 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D N0D28_07620 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D N0D28_02300 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D N0D28_01330 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D N0D28_06225 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D N0D28_02555 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D N0D28_02375 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D N0D28_01830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D N0D28_05625 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D N0D28_08850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D N0D28_12750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D N0D28_09015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:drb03440]
D N0D28_06225 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D N0D28_02555 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D N0D28_08650 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D N0D28_11700 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D N0D28_04695 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D N0D28_13135 recA; recombinase RecA K03553 recA; recombination protein RecA
D N0D28_07995 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D N0D28_05085 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D N0D28_05425 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D N0D28_01715 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D N0D28_06145 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D N0D28_12085 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D N0D28_12720 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D N0D28_02375 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D N0D28_01830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D N0D28_05625 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D N0D28_08850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D N0D28_12750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D N0D28_08800 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:drb02010]
D N0D28_14205 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D N0D28_14250 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D N0D28_14210 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D N0D28_14215 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D N0D28_01565 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein
D N0D28_09640 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D N0D28_04950 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D N0D28_03845 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D N0D28_04940 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D N0D28_15090 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D N0D28_15095 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D N0D28_15105 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D N0D28_15100 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D N0D28_03805 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D N0D28_05245 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D N0D28_11525 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D N0D28_06140 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D N0D28_06135 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D N0D28_06130 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D N0D28_13660 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D N0D28_13665 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D N0D28_13670 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D N0D28_00875 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D N0D28_02140 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D N0D28_00885 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D N0D28_02135 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D N0D28_00890 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D N0D28_02130 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D N0D28_02265 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D N0D28_06865 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D N0D28_09010 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D N0D28_02255 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D N0D28_10765 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D N0D28_02260 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D N0D28_10760 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D N0D28_02250 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D N0D28_10815 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D N0D28_05035 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D N0D28_05030 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D N0D28_05025 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D N0D28_01935 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D N0D28_01930 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D N0D28_01925 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D N0D28_05895 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D N0D28_05905 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D N0D28_05900 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D N0D28_05910 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D N0D28_08960 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D N0D28_08965 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D N0D28_08955 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D N0D28_08950 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D N0D28_06105 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D N0D28_06100 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D N0D28_06095 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D N0D28_06090 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D N0D28_01755 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D N0D28_01750 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D N0D28_05810 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_01595 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_05445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_06190 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_09510 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_01600 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_06185 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_09505 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_01605 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_06180 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D N0D28_09500 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D N0D28_06175 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_09495 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_01610 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_06165 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_09490 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_01475 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D N0D28_11050 ABC transporter permease subunit K09696 natB; sodium transport system permease protein
D N0D28_11045 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D N0D28_07900 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D N0D28_07895 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D N0D28_07725 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D N0D28_12000 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D N0D28_15500 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C
D N0D28_15510 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D N0D28_15515 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D N0D28_04255 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D N0D28_00220 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D N0D28_04250 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D N0D28_11515 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D N0D28_13250 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D N0D28_13255 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D N0D28_05010 ABC transporter transmembrane domain-containing protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D N0D28_04670 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D N0D28_04675 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:drb03070]
D N0D28_06115 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D N0D28_13365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D N0D28_08710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D N0D28_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D N0D28_12230 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D N0D28_05240 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D N0D28_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D N0D28_06465 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D N0D28_05210 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D N0D28_06595 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D N0D28_06590 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:drb02020]
D N0D28_06105 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D N0D28_03250 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D N0D28_14350 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D N0D28_02520 response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D N0D28_10520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D N0D28_01825 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D N0D28_07330 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D N0D28_15525 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D N0D28_09405 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D N0D28_11045 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D N0D28_11050 ABC transporter permease subunit K09696 natB; sodium transport system permease protein
D N0D28_07220 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D N0D28_02460 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D N0D28_02455 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D N0D28_13615 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D N0D28_05990 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D N0D28_09515 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09520 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_08625 helix-turn-helix domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_02035 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_09155 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_13715 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D N0D28_06290 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D N0D28_00025 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D N0D28_13855 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:drb02024]
D N0D28_07270 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D N0D28_09325 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D N0D28_09315 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D N0D28_06570 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D N0D28_11885 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D N0D28_03895 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D N0D28_03850 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D N0D28_03885 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D N0D28_03890 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D N0D28_03880 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D N0D28_05810 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_01595 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_05445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_06190 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_09510 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_01600 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_06185 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_09505 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_01605 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_06180 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D N0D28_09500 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D N0D28_06175 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_09495 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_01610 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_06165 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_09490 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_02085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D N0D28_08625 helix-turn-helix domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_02035 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_09155 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_11125 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_13230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_01730 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_08700 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_09485 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_10170 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_01725 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_08695 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_09480 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_11130 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_13225 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_01720 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_08690 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_09475 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_11135 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_13220 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_08685 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D N0D28_08680 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D N0D28_12230 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D N0D28_10835 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D N0D28_06115 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D N0D28_13365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D N0D28_08710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D N0D28_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D N0D28_05240 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D N0D28_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D N0D28_06465 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D N0D28_01935 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:drb02040]
D N0D28_01755 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D N0D28_09225 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D N0D28_01835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:drb04980]
D N0D28_05955 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D N0D28_06520 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D N0D28_11775 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D N0D28_14230 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:drb01501]
D N0D28_15345 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D N0D28_02675 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D N0D28_05750 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D N0D28_11980 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:drb01502]
D N0D28_13235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D N0D28_15430 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D N0D28_09145 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D N0D28_09135 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D N0D28_14425 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:drb01503]
D N0D28_03250 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D N0D28_06360 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_07650 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_14880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_14350 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:drb01000]
C 01001 Protein kinases [BR:drb01001]
D N0D28_00015 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D N0D28_05215 PQQ-binding-like beta-propeller repeat protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D N0D28_14505 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D N0D28_12935 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D N0D28_02460 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:drb01009]
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_01410 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:drb01002]
D N0D28_07265 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D N0D28_14105 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D N0D28_08495 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D N0D28_11220 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D N0D28_06910 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D N0D28_12330 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D N0D28_14360 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D N0D28_12995 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D N0D28_14800 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D N0D28_10705 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D N0D28_01115 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D N0D28_09990 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D N0D28_06820 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D N0D28_08670 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D N0D28_13320 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D N0D28_09820 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D N0D28_11875 M20 family metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D N0D28_00770 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D N0D28_07525 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D N0D28_08900 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D N0D28_15050 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D N0D28_15245 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D N0D28_14035 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D N0D28_04020 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D N0D28_10430 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D N0D28_15270 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D N0D28_15070 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D N0D28_08980 M50 family metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D N0D28_01225 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D N0D28_14350 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D N0D28_10835 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D N0D28_04305 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D N0D28_02725 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D N0D28_02715 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D N0D28_06215 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D N0D28_04320 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D N0D28_05695 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D N0D28_09460 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D N0D28_00760 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D N0D28_14405 lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D N0D28_04370 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D N0D28_13215 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D N0D28_13260 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D N0D28_01645 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D N0D28_09005 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D N0D28_07775 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D N0D28_07870 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:drb01003]
D N0D28_00215 UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D N0D28_03355 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D N0D28_05750 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D N0D28_09160 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:drb01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:drb01011]
D N0D28_10750 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D N0D28_14435 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D N0D28_14430 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D N0D28_14415 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D N0D28_00940 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D N0D28_13235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D N0D28_15430 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D N0D28_07920 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D N0D28_09135 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D N0D28_14425 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D N0D28_07975 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D N0D28_05225 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D N0D28_05750 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D N0D28_11980 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D N0D28_00770 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D N0D28_04245 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D N0D28_01510 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D N0D28_06360 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_07650 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_14880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:drb01004]
D N0D28_06060 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D N0D28_12140 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D N0D28_06055 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D N0D28_06080 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D N0D28_04035 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_06070 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D N0D28_00225 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D N0D28_00835 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D N0D28_00915 acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D N0D28_07345 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_10355 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D N0D28_02085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D N0D28_04615 long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D N0D28_02785 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D N0D28_01130 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D N0D28_11530 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D N0D28_01665 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:drb01006]
D N0D28_11845 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D N0D28_02920 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D N0D28_10165 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D N0D28_09210 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D N0D28_10015 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D N0D28_02980 ubiA; putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D N0D28_10515 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:drb01007]
D N0D28_07700 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_09965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_01845 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D N0D28_04835 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D N0D28_14475 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D N0D28_09365 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D N0D28_08985 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D N0D28_09735 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D N0D28_08675 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D N0D28_14330 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D N0D28_09425 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D N0D28_09880 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D N0D28_09855 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D N0D28_08540 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D N0D28_09885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D N0D28_07590 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D N0D28_13555 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D N0D28_04155 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D N0D28_05825 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D N0D28_01415 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D N0D28_06790 alanine--tRNA ligase-related protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D N0D28_13825 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D N0D28_13840 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D N0D28_08810 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D N0D28_10600 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D N0D28_02695 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D N0D28_11565 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D N0D28_04900 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D N0D28_10890 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D N0D28_05620 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D N0D28_09970 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:drb03000]
D N0D28_08180 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D N0D28_12025 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D N0D28_13655 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D N0D28_06860 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D N0D28_07820 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D N0D28_10900 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D N0D28_13300 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D N0D28_09000 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D N0D28_05680 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D N0D28_02535 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D N0D28_11790 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D N0D28_08625 helix-turn-helix domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_02035 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_09155 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D N0D28_07070 Crp/Fnr family transcriptional regulator K22490 ldrP; CRP/FNR family transcriptional regulator, LitR-dependent transcriptional activator
D N0D28_08610 RrF2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D N0D28_04745 autorepressor SdpR family transcription factor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D N0D28_03295 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D N0D28_06580 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D N0D28_07195 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D N0D28_01480 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D N0D28_05730 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D N0D28_13265 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D N0D28_14995 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D N0D28_11040 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D N0D28_02505 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D N0D28_01305 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D N0D28_04425 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D N0D28_04470 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D N0D28_07165 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D N0D28_11965 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:drb03021]
D N0D28_03240 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D N0D28_04635 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D N0D28_04630 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D N0D28_02275 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D N0D28_09225 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D N0D28_00240 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D N0D28_08510 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D N0D28_07495 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D N0D28_09025 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D N0D28_13370 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D N0D28_09240 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D N0D28_09465 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D N0D28_09745 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:drb03019]
D N0D28_02515 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D N0D28_13200 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D N0D28_10850 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D N0D28_02045 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D N0D28_11345 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D N0D28_01835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D N0D28_09745 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D N0D28_15155 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D N0D28_04015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D N0D28_10465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D N0D28_15035 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D N0D28_08100 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D N0D28_03975 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D N0D28_07565 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:drb03011]
D N0D28_11545 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D N0D28_08925 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D N0D28_03135 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D N0D28_03235 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D N0D28_03190 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D N0D28_02550 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D N0D28_03080 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D N0D28_03175 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D N0D28_13960 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D N0D28_03100 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D N0D28_03230 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D N0D28_03075 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D N0D28_03225 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D N0D28_03170 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D N0D28_00960 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D N0D28_06620 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D N0D28_03150 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D N0D28_02560 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D N0D28_03125 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D N0D28_04435 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D N0D28_13380 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D N0D28_03120 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D N0D28_03105 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D N0D28_03110 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D N0D28_03165 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D N0D28_03180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D N0D28_02565 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D N0D28_13385 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D N0D28_13375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D N0D28_13390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D N0D28_13965 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D N0D28_03155 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D N0D28_03200 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D N0D28_03140 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D N0D28_03245 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D N0D28_03185 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D N0D28_13475 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D N0D28_01335 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D N0D28_03130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D N0D28_03115 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D N0D28_03160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D N0D28_01340 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D N0D28_07260 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D N0D28_03145 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D N0D28_03195 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D N0D28_07405 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D N0D28_11405 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D N0D28_13360 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D N0D28_12245 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D N0D28_13480 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D N0D28_03220 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D N0D28_10380 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D N0D28_01700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:drb03009]
D N0D28_00015 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D N0D28_14150 era; GTPase Era K03595 era; GTPase
D N0D28_01345 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D N0D28_07495 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D N0D28_09025 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D N0D28_13370 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D N0D28_14935 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D N0D28_06755 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D N0D28_09115 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D N0D28_11465 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D N0D28_02495 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D N0D28_11970 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D N0D28_15150 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D N0D28_09625 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D N0D28_15235 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D N0D28_04375 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D N0D28_07840 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D N0D28_11010 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D N0D28_14975 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D N0D28_14760 RsmD family RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D N0D28_08915 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D N0D28_06695 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D N0D28_07370 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D N0D28_11560 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D N0D28_06630 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D N0D28_01880 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D N0D28_11470 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D N0D28_14140 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D N0D28_00200 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D N0D28_11935 hflX; GTPase HflX K03665 hflX; GTPase
D N0D28_11865 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D N0D28_13945 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D N0D28_12200 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D N0D28_07500 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D N0D28_06840 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D N0D28_01360 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D N0D28_06345 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D N0D28_06530 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D N0D28_00750 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D N0D28_13860 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:drb03016]
D N0D28_02935 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D N0D28_07700 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_09965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_04155 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D N0D28_09735 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D N0D28_14330 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D N0D28_08985 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D N0D28_09365 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D N0D28_09425 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D N0D28_09880 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D N0D28_01415 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D N0D28_06790 alanine--tRNA ligase-related protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D N0D28_09855 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D N0D28_07590 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D N0D28_05825 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D N0D28_13555 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D N0D28_14475 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D N0D28_08675 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D N0D28_09885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D N0D28_13825 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D N0D28_13840 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D N0D28_01845 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D N0D28_04835 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D N0D28_10985 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D N0D28_04975 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D N0D28_05635 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D N0D28_02175 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D N0D28_08520 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D N0D28_06160 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D N0D28_05000 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D N0D28_11865 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D N0D28_10015 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D N0D28_09350 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D N0D28_02490 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D N0D28_12240 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D N0D28_07925 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D N0D28_13030 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D N0D28_13130 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D N0D28_08540 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D N0D28_02705 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D N0D28_04045 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D N0D28_00855 tRNA-dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D N0D28_10030 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D N0D28_03350 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D N0D28_11590 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D N0D28_06635 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D N0D28_02835 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D N0D28_01860 class I SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D N0D28_02115 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D N0D28_07545 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D N0D28_07940 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D N0D28_00930 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D N0D28_10725 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D N0D28_05355 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D N0D28_01690 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D N0D28_07855 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D N0D28_09560 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D N0D28_05235 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D N0D28_02635 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D N0D28_10850 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:drb03012]
D N0D28_07485 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D N0D28_05600 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D N0D28_09605 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D N0D28_08930 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D N0D28_03095 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D N0D28_04645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D N0D28_03085 fusA; elongation factor G K02355 fusA; elongation factor G
D N0D28_10185 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D N0D28_08940 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D N0D28_04120 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D N0D28_05985 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D N0D28_03215 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D N0D28_10875 efp; elongation factor P K02356 efp; elongation factor P
D N0D28_09185 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D N0D28_14585 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:drb03110]
D N0D28_01590 ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D N0D28_07025 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D N0D28_13885 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D N0D28_02720 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D N0D28_04015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D N0D28_10465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D N0D28_05500 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D N0D28_04005 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D N0D28_12300 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D N0D28_04010 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D N0D28_11460 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D N0D28_10470 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D N0D28_14350 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D N0D28_04020 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D N0D28_10430 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D N0D28_15270 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D N0D28_13615 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D N0D28_10835 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D N0D28_00880 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D N0D28_00230 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D N0D28_10220 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D N0D28_02800 trxA; thioredoxin K03671 TXN; thioredoxin
D N0D28_15485 TlpA family protein disulfide reductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:drb04131]
D N0D28_10770 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D N0D28_08475 SPFH domain-containing protein K07192 FLOT; flotillin
D N0D28_09925 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D N0D28_01840 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:drb03032]
D N0D28_13930 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D N0D28_08180 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D N0D28_15085 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D N0D28_01825 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D N0D28_07180 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D N0D28_13575 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D N0D28_02555 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D N0D28_02375 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D N0D28_01830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D N0D28_08850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D N0D28_12750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D N0D28_05625 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D N0D28_07750 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D N0D28_07995 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D N0D28_09015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D N0D28_08630 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D N0D28_07580 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D N0D28_04105 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D N0D28_07055 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:drb03036]
D N0D28_08180 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D N0D28_08475 SPFH domain-containing protein K07192 FLOT; flotillin
D N0D28_15085 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D N0D28_04005 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D N0D28_01825 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D N0D28_01180 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D N0D28_12535 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D N0D28_10900 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D N0D28_13300 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D N0D28_09800 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D N0D28_11860 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D N0D28_14445 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D N0D28_13255 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D N0D28_11980 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D N0D28_13465 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D N0D28_14440 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D N0D28_14420 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D N0D28_13250 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D N0D28_06545 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D N0D28_06880 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D N0D28_06360 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_07650 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_14880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D N0D28_07430 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D N0D28_10425 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D N0D28_10420 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D N0D28_02500 ParA family protein K03496 parA; chromosome partitioning protein
D N0D28_11655 ParA family protein K03496 parA; chromosome partitioning protein
D N0D28_02505 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D N0D28_02490 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D N0D28_02495 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D N0D28_11590 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D N0D28_07790 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:drb03400]
D N0D28_10500 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D N0D28_04100 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D N0D28_09610 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D N0D28_02915 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D N0D28_00795 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D N0D28_07980 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D N0D28_11105 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D N0D28_05610 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D N0D28_14715 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D N0D28_07145 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D N0D28_10190 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D N0D28_13630 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D N0D28_09270 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D N0D28_11000 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D N0D28_02030 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D N0D28_08490 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D N0D28_14915 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D N0D28_10905 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D N0D28_06225 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D N0D28_09015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D N0D28_07995 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D N0D28_07535 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D N0D28_02395 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D N0D28_09995 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D N0D28_07620 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D N0D28_04635 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D N0D28_04630 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D N0D28_03240 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D N0D28_02275 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D N0D28_09650 DEAD/DEAH box helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D N0D28_07395 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D N0D28_14960 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2
D N0D28_07400 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D N0D28_02300 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D N0D28_01330 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D N0D28_02375 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D N0D28_01830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D N0D28_08850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D N0D28_12750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D N0D28_05625 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D N0D28_02555 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D N0D28_12720 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D N0D28_13135 recA; recombinase RecA K03553 recA; recombination protein RecA
D N0D28_05085 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D N0D28_05425 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D N0D28_01715 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D N0D28_08800 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D N0D28_14815 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D N0D28_04770 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D N0D28_08650 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D N0D28_06145 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D N0D28_12085 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D N0D28_11700 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D N0D28_04695 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D N0D28_13090 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D N0D28_08630 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D N0D28_07580 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D N0D28_04105 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D N0D28_07055 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D N0D28_15085 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D N0D28_11345 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D N0D28_08470 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D N0D28_04440 RecX family transcriptional regulator K03565 recX; regulatory protein
D N0D28_06195 helix-hairpin-helix domain-containing protein K02347 polX; DNA polymerase (family X)
D N0D28_15060 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D N0D28_15370 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D N0D28_15375 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D N0D28_01640 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:drb03029]
D N0D28_13715 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D N0D28_07485 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D N0D28_05600 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D N0D28_08930 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D N0D28_03095 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D N0D28_04645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D N0D28_03085 fusA; elongation factor G K02355 fusA; elongation factor G
D N0D28_14150 era; GTPase Era K03595 era; GTPase
D N0D28_01845 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D N0D28_14330 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D N0D28_09880 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D N0D28_07590 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D N0D28_09365 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D N0D28_12280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D N0D28_07110 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D N0D28_13550 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D N0D28_09060 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D N0D28_02555 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D N0D28_11595 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D N0D28_04015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D N0D28_04010 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D N0D28_10465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D N0D28_10470 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D N0D28_05500 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D N0D28_05000 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D N0D28_07790 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D N0D28_10515 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D N0D28_10520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D N0D28_12230 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D N0D28_12030 SCO family protein K07152 SCO1; protein SCO1
D N0D28_13315 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:drb02000]
D N0D28_05010 ABC transporter transmembrane domain-containing protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D N0D28_04670 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D N0D28_04675 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D N0D28_04570 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D N0D28_14175 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D N0D28_04565 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D N0D28_01565 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein
D N0D28_14205 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D N0D28_14250 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D N0D28_14210 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D N0D28_14215 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D N0D28_09640 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D N0D28_04950 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D N0D28_03845 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D N0D28_04940 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D N0D28_03895 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D N0D28_03850 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D N0D28_03885 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D N0D28_03890 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D N0D28_03880 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D N0D28_15090 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D N0D28_15095 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D N0D28_15105 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D N0D28_15100 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D N0D28_00010 ABC transporter substrate-binding protein K24985 ribY; putative riboflavin transport system substrate-binding protein
D N0D28_02215 ABC transporter permease subunit K24986 ribX; putative riboflavin transport system permease protein
D N0D28_03805 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D N0D28_05245 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D N0D28_11525 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D N0D28_05035 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D N0D28_05030 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D N0D28_05025 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D N0D28_06140 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D N0D28_06135 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D N0D28_06130 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D N0D28_13660 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D N0D28_13665 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D N0D28_13670 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D N0D28_00875 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D N0D28_02140 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D N0D28_00885 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D N0D28_02135 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D N0D28_00890 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D N0D28_02130 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D N0D28_05895 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D N0D28_05905 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D N0D28_05900 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D N0D28_05910 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D N0D28_01935 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D N0D28_01930 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D N0D28_01925 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D N0D28_08960 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D N0D28_08965 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D N0D28_08955 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D N0D28_08950 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D N0D28_02265 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D N0D28_06865 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D N0D28_09010 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D N0D28_02255 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D N0D28_10765 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D N0D28_02260 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D N0D28_10760 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D N0D28_02250 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D N0D28_10815 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D N0D28_03820 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D N0D28_03815 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D N0D28_03785 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D N0D28_03810 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D N0D28_06105 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D N0D28_06100 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D N0D28_06095 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D N0D28_06090 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D N0D28_01755 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D N0D28_01750 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D N0D28_05810 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_01595 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_05445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_06190 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_09510 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D N0D28_01600 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_06185 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_09505 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D N0D28_01605 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_06180 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D N0D28_09500 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D N0D28_06175 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_09495 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D N0D28_01610 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_06165 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_09490 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D N0D28_00755 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D N0D28_01375 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D N0D28_05250 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D N0D28_00150 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D N0D28_05255 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D N0D28_11125 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_13230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_01730 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_08700 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_09485 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_10170 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D N0D28_01725 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_08695 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_09480 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_11130 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_13225 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D N0D28_01720 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_08690 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_09475 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_11135 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_13220 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D N0D28_08685 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D N0D28_08680 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D N0D28_13820 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D N0D28_13815 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D N0D28_01475 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D N0D28_04255 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D N0D28_00220 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D N0D28_04250 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D N0D28_11515 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D N0D28_11050 ABC transporter permease subunit K09696 natB; sodium transport system permease protein
D N0D28_11045 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D N0D28_07900 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D N0D28_07895 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D N0D28_05525 hypothetical protein K25149 narB; polyether ionophore transport system permease protein
D N0D28_05530 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D N0D28_07725 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D N0D28_12000 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D N0D28_15500 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C
D N0D28_15510 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D N0D28_15515 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D N0D28_13250 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D N0D28_13255 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D N0D28_09095 ABC-2 family transporter protein K25154 evrC; viologen exporter family transport system permease protein
D N0D28_09100 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein
D N0D28_09105 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D N0D28_02465 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D N0D28_10400 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D N0D28_14100 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D N0D28_02475 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D N0D28_10405 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D N0D28_14095 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D N0D28_15220 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D N0D28_12595 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D N0D28_15300 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D N0D28_12585 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D N0D28_12590 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D N0D28_15215 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D N0D28_15305 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D N0D28_12660 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D N0D28_14260 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D N0D28_06650 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D N0D28_05700 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D N0D28_02055 MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D N0D28_06380 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D N0D28_15125 NAD-binding protein K10716 kch; voltage-gated potassium channel
D N0D28_09410 ion channel K08715 IRPC; inward rectifier potassium channel
D N0D28_05995 ammonium transporter K03320 amt; ammonium transporter, Amt family
D N0D28_05205 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D N0D28_00300 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D N0D28_00175 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D N0D28_02780 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D N0D28_12655 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D N0D28_12650 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D N0D28_02280 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D N0D28_02295 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D N0D28_12680 TMEM175 family protein K24915 TMEM175; TMEM175 potassium channel family protein
D N0D28_02875 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D N0D28_02880 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D N0D28_06335 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D N0D28_11595 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D N0D28_05670 CidA/LrgA family protein K06518 cidA; holin-like protein
D N0D28_05060 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D N0D28_05065 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D N0D28_13800 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D N0D28_12745 DMT family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D N0D28_07035 DMT family transporter K11939 rhtA; inner membrane transporter RhtA
D N0D28_15180 cax; calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D N0D28_02530 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D N0D28_00765 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D N0D28_05830 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D N0D28_04175 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D N0D28_04170 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D N0D28_09370 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D N0D28_09375 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D N0D28_01920 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D N0D28_11280 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D N0D28_09865 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D N0D28_12570 SLC13 family permease K03893 arsB; arsenical pump membrane protein
D N0D28_05225 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D N0D28_13050 AEC family transporter K24180 mleP; malate permease and related proteins
D N0D28_00160 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D N0D28_00165 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D N0D28_13680 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D N0D28_15265 VIT family protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D N0D28_14420 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D N0D28_15520 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D N0D28_05725 nicotinamide mononucleotide transporter family protein K03811 pnuC; nicotinamide mononucleotide transporter
D N0D28_06500 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D N0D28_06495 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D N0D28_15490 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D N0D28_11645 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:drb02044]
D N0D28_14105 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D N0D28_02850 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D N0D28_11870 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D N0D28_05885 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D N0D28_05865 secretin K02666 pilQ; type IV pilus assembly protein PilQ
D N0D28_02855 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D N0D28_09340 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D N0D28_03040 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D N0D28_13615 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D N0D28_05240 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D N0D28_06115 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D N0D28_13365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D N0D28_08710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D N0D28_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D N0D28_06465 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D N0D28_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D N0D28_12230 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D N0D28_05210 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D N0D28_06595 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D N0D28_06590 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:drb02042]
D N0D28_02875 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D N0D28_02880 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D N0D28_06335 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D N0D28_12350 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:drb02022]
D N0D28_03250 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D N0D28_02520 response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D N0D28_12935 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D N0D28_04580 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D N0D28_07220 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D N0D28_02460 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D N0D28_02455 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
C 02035 Bacterial motility proteins [BR:drb02035]
D N0D28_01755 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D N0D28_02855 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D N0D28_09340 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D N0D28_02850 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D N0D28_11870 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D N0D28_14105 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D N0D28_05865 secretin K02666 pilQ; type IV pilus assembly protein PilQ
D N0D28_05885 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D N0D28_13615 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:drb04812]
D N0D28_06545 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D N0D28_14445 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D N0D28_07430 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D N0D28_10425 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D N0D28_10420 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D N0D28_02500 ParA family protein K03496 parA; chromosome partitioning protein
D N0D28_11655 ParA family protein K03496 parA; chromosome partitioning protein
D N0D28_02505 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:drb04147]
D N0D28_01835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D N0D28_09925 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D N0D28_09930 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D N0D28_01840 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D N0D28_09820 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D N0D28_08475 SPFH domain-containing protein K07192 FLOT; flotillin
D N0D28_10465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D N0D28_04015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D N0D28_12340 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D N0D28_03095 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D N0D28_04645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D N0D28_04975 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D N0D28_02085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D N0D28_14605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D N0D28_03210 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D N0D28_14830 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D N0D28_08020 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D N0D28_10565 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D N0D28_10590 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D N0D28_13990 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D N0D28_01655 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D N0D28_09515 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_09520 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D N0D28_08840 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D N0D28_10965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D N0D28_11455 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D N0D28_00310 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D N0D28_07460 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D N0D28_10155 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_10160 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D N0D28_04265 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D N0D28_09935 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:drb02048]
D N0D28_03425 hsdR; type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D N0D28_03420 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D N0D28_01010 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D N0D28_08180 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D N0D28_02185 restriction endonuclease K07448 mrr; restriction system protein
D N0D28_09720 restriction endonuclease K07448 mrr; restriction system protein
D N0D28_06545 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D N0D28_07700 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_09965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D N0D28_05000 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:drb04052]
D N0D28_05715 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:drb01504]
D N0D28_09525 AAC(3) family N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D N0D28_12950 aminoglycoside 3'-phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]
D N0D28_06650 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D N0D28_05700 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D N0D28_02155 chloramphenicol phosphotransferase CPT family protein K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
D N0D28_08795 cpt; chloramphenicol phosphotransferase CPT K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
D N0D28_02675 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D N0D28_02520 response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D N0D28_03250 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:drb00537]
D N0D28_09820 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:drb03100]
D N0D28_12335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D N0D28_08105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D N0D28_01080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D N0D28_08645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_00980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_05110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_04080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D N0D28_03970 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D N0D28_10385 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D N0D28_14125 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D N0D28_03360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D N0D28_01365 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D N0D28_11550 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D N0D28_10285 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D N0D28_11420 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D N0D28_04655 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_01695 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_07285 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_12755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_04070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D N0D28_12900 tRNA-His K14226 tRNA-His; tRNA His
D N0D28_00120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D N0D28_02205 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_12905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_08715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_01315 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_02575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D N0D28_12870 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D N0D28_06460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D N0D28_02955 tRNA-Met K14230 tRNA-Met; tRNA Met
D N0D28_05820 tRNA-Ile K14230 tRNA-Met; tRNA Met
D N0D28_13485 tRNA-Met K14230 tRNA-Met; tRNA Met
D N0D28_14130 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D N0D28_04065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D N0D28_04445 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D N0D28_15045 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D N0D28_00970 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D N0D28_10260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D N0D28_05230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D N0D28_04665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D N0D28_12615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D N0D28_04650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D N0D28_02050 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D N0D28_04660 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D N0D28_03365 tRNA-Val K14237 tRNA-Val; tRNA Val
D N0D28_11205 tRNA-Val K14237 tRNA-Val; tRNA Val
D N0D28_05815 tRNA-Val K14237 tRNA-Val; tRNA Val
D N0D28_01700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D N0D28_07440 iron-containing alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24]
D N0D28_03005 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D N0D28_03015 xanthine dehydrogenase family protein subunit M K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D N0D28_03010 molybdopterin-dependent oxidoreductase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D N0D28_05320 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D N0D28_13560 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D N0D28_14625 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D N0D28_07105 YpdA family putative bacillithiol disulfide reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D N0D28_05275 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D N0D28_11625 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D N0D28_07520 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D N0D28_07010 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D N0D28_07850 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D N0D28_11240 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D N0D28_14395 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D N0D28_09535 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D N0D28_09530 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D N0D28_05540 glutaredoxin family protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D N0D28_03325 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D N0D28_04050 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D N0D28_13060 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D N0D28_09915 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D N0D28_13530 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D N0D28_10970 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D N0D28_11020 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D N0D28_06605 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D N0D28_07130 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D N0D28_04165 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D N0D28_10885 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D N0D28_01555 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D N0D28_01440 macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D N0D28_07690 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D N0D28_01070 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D N0D28_05650 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D N0D28_12205 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D N0D28_02845 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D N0D28_04280 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D N0D28_01545 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D N0D28_10200 PIG-L family deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D N0D28_01405 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D N0D28_00830 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D N0D28_08555 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D N0D28_02805 alpha/beta fold hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D N0D28_12415 UV damage endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D N0D28_04840 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D N0D28_14925 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D N0D28_05915 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D N0D28_04225 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
C 99981 Carbohydrate metabolism
D N0D28_13270 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D N0D28_05940 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D N0D28_05945 lactate utilization protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D N0D28_05950 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D N0D28_09150 bshC; bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D N0D28_04810 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D N0D28_05430 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D N0D28_02665 Rieske 2Fe-2S domain-containing protein K15878 K15878; rieske iron-sulfur protein
D N0D28_02660 cytochrome bc complex cytochrome b subunit K15879 narC; cytochrome b-561
D N0D28_07455 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D N0D28_11060 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D N0D28_15365 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D N0D28_11600 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D N0D28_12305 DUF2847 family protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D N0D28_07435 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
D N0D28_04605 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D N0D28_01585 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D N0D28_12910 tig; trigger factor K03545 tig; trigger factor
D N0D28_12520 ferric reductase-like transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D N0D28_07515 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D N0D28_09785 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D N0D28_14575 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D N0D28_11115 OsmC family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D N0D28_04125 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D N0D28_06415 YraN family protein K07460 yraN; putative endonuclease
D N0D28_02605 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D N0D28_12185 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D N0D28_15030 IS66 family transposase K07484 K07484; transposase
D N0D28_02380 IS66 family transposase K07484 K07484; transposase
D N0D28_04760 IS66 family transposase K07484 K07484; transposase
D N0D28_07310 IS66 family transposase K07484 K07484; transposase
D N0D28_07720 IS66 family transposase K07484 K07484; transposase
D N0D28_08455 IS66 family transposase K07484 K07484; transposase
D N0D28_09615 IS66 family transposase K07484 K07484; transposase
D N0D28_12320 IS66 family transposase K07484 K07484; transposase
D N0D28_00735 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_11170 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_11230 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_11620 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_12015 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_12840 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_14645 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D N0D28_03390 IS5 family transposase K07492 K07492; putative transposase
D N0D28_10920 IS5 family transposase K07492 K07492; putative transposase
D N0D28_14685 IS5 family transposase K07492 K07492; putative transposase
D N0D28_14745 IS5 family transposase K07492 K07492; putative transposase
D N0D28_00520 transposase K07496 K07496; putative transposase
D N0D28_12255 transposase K07496 K07496; putative transposase
D N0D28_00435 transposase K07496 K07496; putative transposase
D N0D28_00730 transposase K07496 K07496; putative transposase
D N0D28_11175 transposase K07496 K07496; putative transposase
D N0D28_11235 transposase K07496 K07496; putative transposase
D N0D28_11615 transposase K07496 K07496; putative transposase
D N0D28_12010 transposase K07496 K07496; putative transposase
D N0D28_12845 transposase K07496 K07496; putative transposase
D N0D28_14640 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D N0D28_08755 PspA/IM30 family protein K03969 pspA; phage shock protein A
D N0D28_01910 DUF4357 domain-containing protein K07504 K07504; predicted type IV restriction endonuclease
D N0D28_04700 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D N0D28_04515 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D N0D28_06705 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D N0D28_14945 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D N0D28_04115 RNA-binding protein K06346 jag; spoIIIJ-associated protein
D N0D28_09245 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
D N0D28_01210 ADP-ribosylation factor-like protein K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D N0D28_02815 TerD family protein K05795 terD; tellurium resistance protein TerD
D N0D28_02830 TerD family protein K05795 terD; tellurium resistance protein TerD
D N0D28_05090 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D N0D28_08570 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D N0D28_13280 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D N0D28_15495 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
D N0D28_02080 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D N0D28_06085 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D N0D28_09120 TerB family tellurite resistance protein K05793 terB; tellurite resistance protein TerB
D N0D28_01445 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D N0D28_03335 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D N0D28_04750 DUF1648 domain-containing protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D N0D28_07185 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D N0D28_09090 globin K06886 glbN; hemoglobin
D N0D28_03020 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D N0D28_01100 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D N0D28_01985 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D N0D28_09825 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D N0D28_10225 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D N0D28_14450 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D N0D28_12665 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D N0D28_12675 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D N0D28_02970 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D N0D28_12035 cytochrome c oxidase assembly protein K02862 ctaG; putative membrane protein
D N0D28_06230 YdcF family protein K03748 sanA; SanA protein
D N0D28_14580 DedA family protein K03975 dedA; membrane-associated protein
D N0D28_12425 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D N0D28_09330 phage holin family protein K08972 K08972; putative membrane protein
D N0D28_10525 DUF420 domain-containing protein K08976 K08976; putative membrane protein
D N0D28_07990 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D N0D28_07385 DUF4142 domain-containing protein K08995 K08995; putative membrane protein
D N0D28_13055 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D N0D28_00825 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D N0D28_04730 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D N0D28_14860 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D N0D28_00905 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D N0D28_09110 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D N0D28_11815 prolyl oligopeptidase family serine peptidase K06889 K06889; uncharacterized protein
D N0D28_14980 lysophospholipase K06889 K06889; uncharacterized protein
D N0D28_14385 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D N0D28_05615 CoA-binding protein K06929 K06929; uncharacterized protein
D N0D28_09050 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D N0D28_06625 KH domain-containing protein K06960 K06960; uncharacterized protein
D N0D28_05585 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D N0D28_14255 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D N0D28_01800 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D N0D28_06815 DUF86 domain-containing protein K07075 K07075; uncharacterized protein
D N0D28_01960 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D N0D28_05290 transporter substrate-binding domain-containing protein K07080 K07080; uncharacterized protein
D N0D28_04365 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D N0D28_05270 TSUP family transporter K07090 K07090; uncharacterized protein
D N0D28_01195 metallophosphoesterase K07096 K07096; uncharacterized protein
D N0D28_07315 metallophosphoesterase K07098 K07098; uncharacterized protein
D N0D28_07320 metallophosphoesterase K07098 K07098; uncharacterized protein
D N0D28_04450 metallophosphoesterase K07099 K07099; uncharacterized protein
D N0D28_04690 roadblock/LC7 domain-containing protein K07131 K07131; uncharacterized protein
D N0D28_07085 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D N0D28_13540 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D N0D28_14300 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D N0D28_07985 zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D N0D28_12235 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D N0D28_12210 DUF99 family protein K09120 K09120; uncharacterized protein
D N0D28_10255 DUF402 domain-containing protein K09145 K09145; uncharacterized protein
D N0D28_07745 phosphohydrolase K09163 K09163; uncharacterized protein
D N0D28_06845 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D N0D28_13955 DUF2071 domain-containing protein K09166 K09166; uncharacterized protein
D N0D28_03000 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D N0D28_04880 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein
D N0D28_01215 ACT domain-containing protein K09707 K09707; uncharacterized protein
D N0D28_02795 DUF309 domain-containing protein K09763 K09763; uncharacterized protein
D N0D28_05965 DUF503 family protein K09764 K09764; uncharacterized protein
D N0D28_09035 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D N0D28_03960 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D N0D28_12110 DNA double-strand break repair nuclease NurA K09785 K09785; uncharacterized protein
D N0D28_06955 YbaN family protein K09790 K09790; uncharacterized protein
D N0D28_06615 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D N0D28_02810 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D N0D28_13355 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein
D N0D28_07120 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D N0D28_11370 YegP family protein K09946 K09946; uncharacterized protein
D N0D28_06970 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D N0D28_15170 DUF2239 family protein K09965 K09965; uncharacterized protein
D N0D28_12250 hypothetical protein K09968 K09968; uncharacterized protein
D N0D28_14950 DUF47 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024