+D GENES KO #

  KEGG Orthology (KO) - Desulfolutivibrio sulfoxidireducens

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dsx00010] D GD604_16055 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GD604_06740 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_09380 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D GD604_12790 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D GD604_18090 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_07020 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_16140 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GD604_07375 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_03180 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_09865 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GD604_15175 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GD604_16335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GD604_09870 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D GD604_09670 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GD604_08820 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_05825 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_10090 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_10690 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GD604_03050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GD604_16300 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_00715 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_01595 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_01740 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_02400 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_09255 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_10715 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D GD604_12815 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_07170 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_10780 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_12810 2-oxoacid ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_07175 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_10785 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D GD604_05880 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_12700 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_06165 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_08605 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_10545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_14445 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_05200 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:dsx00020] D GD604_03795 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D GD604_04985 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D GD604_15365 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GD604_07750 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_12815 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_07170 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_10780 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_12810 2-oxoacid ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_07175 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_10785 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_07180 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D GD604_10790 pyruvate ferredoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D GD604_07165 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D GD604_10775 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D GD604_10795 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GD604_12615 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D GD604_12610 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D GD604_12620 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D GD604_12605 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D GD604_12600 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D GD604_09260 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D GD604_05200 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:dsx00030] D GD604_06740 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GD604_17360 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D GD604_12785 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D GD604_09125 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D GD604_12780 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_10610 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D GD604_15600 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D GD604_00685 hypothetical protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D GD604_05045 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D GD604_06735 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D GD604_18090 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_07020 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_16140 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GD604_07375 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_03180 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_09380 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D GD604_12790 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:dsx00040] D GD604_04960 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GD604_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GD604_17360 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:dsx00051] D GD604_11280 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_09380 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D GD604_12790 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D GD604_18090 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_07020 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_16140 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GD604_07375 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_03180 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_09865 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GD604_12780 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D GD604_09055 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D GD604_17310 PTS cellobiose transporter subunit IIA K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:dsx00052] D GD604_01460 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GD604_03530 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GD604_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_16055 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:dsx00053] D GD604_04960 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GD604_00215 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:dsx00500] D GD604_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GD604_10455 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D GD604_01835 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D GD604_10450 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D GD604_16100 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D GD604_18110 glgP; glycogen/starch/alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D GD604_02710 glgP; glycogen/starch/alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D GD604_04520 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D GD604_02435 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D GD604_04525 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D GD604_04530 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_16055 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GD604_06740 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dsx00520] D GD604_12880 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D GD604_02325 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GD604_02935 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D GD604_07385 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D GD604_14105 FAD-binding protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D GD604_00905 N-acylneuraminate-9-phosphate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132] D GD604_09845 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D GD604_13410 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D GD604_13405 oxidoreductase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D GD604_09830 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D GD604_14555 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D GD604_01400 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D GD604_01470 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D GD604_00885 hypothetical protein K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D GD604_13335 hypothetical protein K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D GD604_07000 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D GD604_14320 NAD-dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D GD604_11790 galE; UDP-glucose 4-epimerase GalE K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5] D GD604_16055 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GD604_04960 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GD604_01460 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GD604_03530 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GD604_00215 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D GD604_09055 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D GD604_17310 PTS cellobiose transporter subunit IIA K02796 manZ; mannose PTS system EIID component D GD604_06740 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GD604_11280 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D GD604_13330 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D GD604_13385 LegC family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:dsx00620] D GD604_12700 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_06165 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_08605 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_10545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D GD604_12815 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_07170 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_10780 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_12810 2-oxoacid ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_07175 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_10785 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D GD604_05880 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GD604_07135 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GD604_07130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GD604_03050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GD604_05600 acetyl-CoA carboxylase carboxyl transferase subunit alpha/beta K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GD604_15260 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_14445 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GD604_12075 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D GD604_03105 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D GD604_10185 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D GD604_12875 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D GD604_09260 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D GD604_12605 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D GD604_12600 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D GD604_12615 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D GD604_12610 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D GD604_12620 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D GD604_05200 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D GD604_16300 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_00715 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_01595 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_01740 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_02400 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_09255 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_10715 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_04925 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D GD604_05780 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D GD604_06695 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dsx00630] D GD604_12700 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_06165 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_08605 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_10545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_03795 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D GD604_04985 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D GD604_15365 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GD604_14435 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D GD604_17330 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D GD604_05675 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D GD604_14440 4Fe-4S dicluster domain-containing protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D GD604_17355 4Fe-4S dicluster domain-containing protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D GD604_04265 catalase K03781 katE; catalase [EC:1.11.1.6] D GD604_02425 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D GD604_16570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00150 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_01185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_03405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GD604_11135 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D GD604_11140 aminotransferase class V-fold PLP-dependent enzyme K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D GD604_09960 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_11130 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D GD604_04790 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GD604_04865 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GD604_07655 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GD604_01115 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_02600 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_04785 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_04860 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_07660 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_12100 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9] D GD604_04570 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D GD604_04090 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:dsx00640] D GD604_12700 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_06165 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_08605 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_10545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_14445 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GD604_07135 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GD604_07130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D GD604_05600 acetyl-CoA carboxylase carboxyl transferase subunit alpha/beta K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GD604_10795 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GD604_10225 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:dsx00650] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D GD604_12615 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D GD604_12610 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D GD604_12620 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D GD604_02465 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D GD604_15380 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D GD604_12815 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_07170 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_10780 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D GD604_12810 2-oxoacid ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_07175 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_10785 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D GD604_05725 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_09530 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GD604_13970 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:dsx00660] D GD604_05725 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_09530 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GD604_13970 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D GD604_02640 4-hydroxybutyrate--acetyl-CoA CoA transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-] D GD604_10795 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GD604_06700 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D GD604_06705 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D GD604_06710 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dsx00562] D GD604_09940 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D GD604_09865 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dsx00190] D GD604_01655 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D GD604_01650 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D GD604_01645 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D GD604_01640 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D GD604_01635 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D GD604_01630 4Fe-4S dicluster domain-containing protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D GD604_01785 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D GD604_01780 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D GD604_01760 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D GD604_01755 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D GD604_12615 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D GD604_12610 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D GD604_12620 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D GD604_01435 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D GD604_01430 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D GD604_02910 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D GD604_02920 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D GD604_02915 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D GD604_02905 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D GD604_02925 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D GD604_02930 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D GD604_00470 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D GD604_02895 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D GD604_02900 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D GD604_00475 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D GD604_09070 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:dsx00680] D GD604_04790 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GD604_04865 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GD604_07655 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GD604_01115 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_02600 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_04785 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_04860 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_07660 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GD604_12445 formate dehydrogenase K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D GD604_05900 4Fe-4S ferredoxin K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D GD604_08985 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D GD604_08990 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D GD604_03405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GD604_10690 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GD604_18090 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_07020 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D GD604_16140 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GD604_07375 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_03180 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_09380 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D GD604_12790 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_17460 formylmethanofuran dehydrogenase K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D GD604_01670 trehalose-binding protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D GD604_12470 4Fe-4S dicluster domain-containing protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D GD604_09545 hydrogenase maturation protease K00442 frhD; coenzyme F420 hydrogenase subunit delta D GD604_12440 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_12455 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_00995 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_05890 NAD(P)-binding protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_09565 4Fe-4S dicluster domain-containing protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_12430 disulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_12435 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_00985 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D GD604_12450 hydrogenase iron-sulfur subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D GD604_01005 hydrogenase iron-sulfur subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D GD604_05895 hydrogenase iron-sulfur subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D GD604_09560 hydrogenase iron-sulfur subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D GD604_09550 Ni/Fe hydrogenase subunit alpha K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D GD604_09555 methyl viologen-reducing hydrogenase K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D GD604_07135 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GD604_07130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GD604_12700 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_06165 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_08605 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_10545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D GD604_16300 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_00715 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_01595 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_01740 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_02400 pyruvate, phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_09255 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_10715 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GD604_09670 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GD604_08820 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_05825 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_10090 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_03535 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_04355 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_13585 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D GD604_09795 methanol--corrinoid methyltransferase K04480 mtaB; methanol---5-hydroxybenzimidazolylcobamide Co-methyltransferase [EC:2.1.1.90] D GD604_09790 methanol--cobalamin methyltransferase K14081 mtaC; methanol corrinoid protein D GD604_17645 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D GD604_15970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K19793 mfnC; (5-formylfuran-3-yl)methyl phosphate transaminase [EC:2.6.1.108] C 00910 Nitrogen metabolism [PATH:dsx00910] D GD604_04090 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D GD604_13200 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D GD604_13205 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D GD604_12490 AAA family ATPase K02588 nifH; nitrogenase iron protein NifH D GD604_13185 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D GD604_16365 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D GD604_02500 hydroxylamine oxidoreductase K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D GD604_01925 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D GD604_16570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00150 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_01185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_09925 4Fe-4S dicluster domain-containing protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D GD604_17015 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D GD604_01445 NAD(P)-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D GD604_12630 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dsx00920] D GD604_12005 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D GD604_12010 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D GD604_12015 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D GD604_18170 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_04850 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_11365 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D GD604_16040 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D GD604_12355 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D GD604_03190 adenylyl-sulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D GD604_03185 aprB; adenylyl-sulfate reductase subunit beta K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D GD604_02670 dsrA; dissimilatory-type sulfite reductase subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D GD604_02675 dsrB; dissimilatory-type sulfite reductase subunit beta K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D GD604_17150 menaquinol oxidoreductase K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D GD604_17155 (Fe-S)-binding protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D GD604_17160 cytochrome C K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D GD604_17165 4Fe-4S dicluster domain-containing protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O D GD604_17170 menaquinol oxidoreductase K27191 dsrP; [DsrC]-trisulfide reductase subunit P D GD604_16610 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D GD604_01660 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D GD604_06570 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D GD604_06565 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D GD604_03805 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D GD604_00785 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D GD604_00780 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dsx00061] D GD604_05600 acetyl-CoA carboxylase carboxyl transferase subunit alpha/beta K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GD604_03395 acyl carrier protein K02078 acpP; acyl carrier protein D GD604_11060 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D GD604_03385 fabH; beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D GD604_03400 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GD604_03390 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GD604_15095 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D GD604_05020 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D GD604_05105 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_06850 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dsx00071] D GD604_05105 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_06850 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D GD604_05880 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:dsx00121] D GD604_14285 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dsx00561] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_10225 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D GD604_08860 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D GD604_03380 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D GD604_17575 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D GD604_13990 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GD604_08510 alpha/beta fold hydrolase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:dsx00564] D GD604_17960 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D GD604_08880 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D GD604_08875 glpB; glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D GD604_17575 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D GD604_13990 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GD604_04495 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D GD604_13160 eutB; ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D GD604_13155 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D GD604_02730 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D GD604_06690 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D GD604_06685 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D GD604_09405 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D GD604_13070 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D GD604_09320 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D GD604_07090 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dsx00230] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_10610 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D GD604_10285 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D GD604_03925 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D GD604_18030 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D GD604_09020 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D GD604_14535 phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D GD604_10165 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D GD604_03920 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D GD604_09090 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D GD604_18215 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D GD604_15840 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GD604_17580 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GD604_04900 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D GD604_01800 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D GD604_03465 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D GD604_05575 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D GD604_01830 DUF1255 family protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D GD604_12670 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D GD604_12745 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D GD604_05325 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D GD604_06535 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D GD604_02330 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D GD604_05850 molybdopterin-dependent oxidoreductase K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D GD604_05855 molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D GD604_05330 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D GD604_03880 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D GD604_16065 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GD604_15165 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D GD604_03590 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D GD604_14215 CHASE2 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D GD604_00745 CHASE2 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D GD604_08495 hypothetical protein K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D GD604_08220 CYTH domain-containing protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D GD604_17590 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D GD604_11320 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D GD604_09130 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D GD604_02960 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D GD604_03265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GD604_07885 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D GD604_11365 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D GD604_18170 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_04850 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:dsx00240] D GD604_10290 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D GD604_12150 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D GD604_00390 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D GD604_00385 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3] D GD604_07480 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D GD604_07475 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D GD604_18210 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D GD604_02050 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D GD604_14020 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D GD604_06535 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D GD604_03265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GD604_11150 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D GD604_09025 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D GD604_02130 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D GD604_01800 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D GD604_03465 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D GD604_01830 DUF1255 family protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D GD604_01935 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D GD604_15120 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D GD604_02960 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D GD604_15165 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D GD604_16065 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GD604_03430 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D GD604_03455 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D GD604_16105 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D GD604_09695 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dsx00250] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_09985 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D GD604_11430 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D GD604_17500 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D GD604_02440 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D GD604_13140 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D GD604_04700 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D GD604_07210 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D GD604_07215 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D GD604_17590 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D GD604_18215 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D GD604_00390 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D GD604_02465 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D GD604_15380 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GD604_09925 4Fe-4S dicluster domain-containing protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D GD604_17015 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D GD604_01445 NAD(P)-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D GD604_14350 aldehyde dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GD604_16570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00150 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_01185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_10290 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D GD604_12150 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D GD604_09020 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D GD604_02325 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GD604_10285 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dsx00260] D GD604_04930 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GD604_11040 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GD604_10095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D GD604_08440 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D GD604_03405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GD604_09670 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GD604_08820 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_05825 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_10090 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GD604_03535 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_04355 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_13585 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D GD604_11135 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D GD604_11140 aminotransferase class V-fold PLP-dependent enzyme K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D GD604_09960 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_11130 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D GD604_06690 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D GD604_11380 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D GD604_03125 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D GD604_03130 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GD604_10970 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dsx00270] D GD604_06570 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D GD604_06565 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D GD604_01685 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D GD604_12760 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D GD604_11985 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D GD604_17855 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D GD604_04905 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D GD604_12670 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D GD604_04895 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D GD604_13100 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D GD604_15895 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GD604_17850 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D GD604_04930 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GD604_11040 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GD604_10095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D GD604_18225 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D GD604_10330 4Fe-4S dicluster domain-containing protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D GD604_03805 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D GD604_17300 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D GD604_11695 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_03535 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_04355 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:dsx00280] D GD604_11695 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dsx00290] D GD604_06700 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D GD604_06705 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D GD604_06710 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D GD604_05725 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_09530 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GD604_08045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D GD604_00295 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D GD604_11695 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GD604_04925 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D GD604_05780 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D GD604_06695 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dsx00300] D GD604_10095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D GD604_04930 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GD604_11040 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GD604_06445 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D GD604_08785 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D GD604_16110 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D GD604_04885 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D GD604_17180 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D GD604_09110 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D GD604_07900 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D GD604_13985 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D GD604_14140 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D GD604_14135 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:dsx00310] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_15380 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GD604_10005 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:dsx00220] D GD604_07205 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D GD604_07210 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D GD604_07215 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D GD604_09020 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D GD604_16570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00150 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_01185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_12750 N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D GD604_15345 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D GD604_15135 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D GD604_03060 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D GD604_16110 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:dsx00330] D GD604_07755 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D GD604_07760 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D GD604_11075 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D GD604_16045 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D GD604_15680 acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_03750 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D GD604_06530 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D GD604_14350 aldehyde dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GD604_17655 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D GD604_05225 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_10005 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:dsx00340] D GD604_00355 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D GD604_00360 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D GD604_05350 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D GD604_13355 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D GD604_08730 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D GD604_13360 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D GD604_08725 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D GD604_05340 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D GD604_02125 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GD604_09095 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:dsx00350] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_02125 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GD604_13015 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D GD604_05880 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GD604_15380 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:dsx00360] D GD604_13015 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D GD604_02140 AMP-binding protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D GD604_03085 AMP-binding protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D GD604_08810 AMP-binding protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D GD604_06495 hotdog fold thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D GD604_17810 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_02125 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:dsx00380] D GD604_12100 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_13015 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_04265 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dsx00400] D GD604_07375 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_03180 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D GD604_03175 3-dehydroquinate synthase II family protein K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24] D GD604_09160 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D GD604_14685 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D GD604_15635 AAA family ATPase K00891 aroK; shikimate kinase [EC:2.7.1.71] D GD604_03165 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D GD604_18025 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D GD604_03155 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D GD604_03150 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GD604_03145 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D GD604_03135 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D GD604_03140 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D GD604_03125 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D GD604_03130 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GD604_10970 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GD604_03160 prephenate dehydrogenase/arogenate dehydrogenase family protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D GD604_07730 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5] D GD604_03170 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_02125 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dsx00410] D GD604_02465 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_17860 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:dsx00430] D GD604_02465 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D GD604_13140 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D GD604_07130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GD604_07135 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:dsx00440] D GD604_09215 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D GD604_09220 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:dsx00450] D GD604_01685 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D GD604_12760 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D GD604_11985 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D GD604_03725 FAD-binding protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D GD604_09365 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D GD604_10405 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D GD604_18170 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_04850 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_05820 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D GD604_03710 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D GD604_03945 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:dsx00460] D GD604_03405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GD604_04090 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:dsx00470] D GD604_08745 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D GD604_12145 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GD604_09020 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D GD604_01815 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D GD604_14125 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D GD604_11380 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D GD604_17180 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D GD604_07900 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:dsx00480] D GD604_09905 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D GD604_07750 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:dsx00540] D GD604_01510 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D GD604_17515 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D GD604_17525 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D GD604_09030 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D GD604_17520 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D GD604_15640 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D GD604_00240 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D GD604_06600 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D GD604_08370 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D GD604_08735 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dsx00541] D GD604_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GD604_01460 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GD604_03530 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GD604_04960 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GD604_00215 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D GD604_15405 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D GD604_06510 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D GD604_11285 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D GD604_06515 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D GD604_11465 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D GD604_11280 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D GD604_13330 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D GD604_13385 LegC family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D GD604_02935 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D GD604_09845 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D GD604_01400 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D GD604_01470 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D GD604_00885 hypothetical protein K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D GD604_14555 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D GD604_13410 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D GD604_13405 oxidoreductase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D GD604_09830 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:dsx00550] D GD604_07385 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D GD604_14105 FAD-binding protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D GD604_14110 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D GD604_14125 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D GD604_14140 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D GD604_12145 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GD604_14135 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D GD604_14030 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D GD604_09175 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GD604_14130 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D GD604_14115 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D GD604_13750 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GD604_12960 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D GD604_02880 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D GD604_14145 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GD604_01380 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:dsx00552] D GD604_09175 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dsx00543] D GD604_14305 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D GD604_14360 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D GD604_02100 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D GD604_06585 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D GD604_02105 hypothetical protein K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D GD604_05235 hypothetical protein K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D GD604_06590 hypothetical protein K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D GD604_06570 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dsx00730] D GD604_09665 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D GD604_11660 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D GD604_05245 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_05100 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D GD604_13095 thiazole biosynthesis protein K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D GD604_10725 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D GD604_18065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 00740 Riboflavin metabolism [PATH:dsx00740] D GD604_02845 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D GD604_03435 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D GD604_10965 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D GD604_02840 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D GD604_02850 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D GD604_07030 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D GD604_08075 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_08540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:dsx00750] D GD604_10445 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D GD604_04955 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D GD604_08440 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:dsx00760] D GD604_09985 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D GD604_09980 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D GD604_09975 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D GD604_10220 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D GD604_05575 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D GD604_01800 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D GD604_03465 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D GD604_05230 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D GD604_03265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GD604_17120 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D GD604_11470 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D GD604_07270 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D GD604_12225 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D GD604_15380 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:dsx00770] D GD604_05725 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_09530 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GD604_08040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GD604_08045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D GD604_00295 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D GD604_05655 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D GD604_17860 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D GD604_07085 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D GD604_00205 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D GD604_03265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GD604_09335 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D GD604_04950 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D GD604_11695 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:dsx00780] D GD604_03400 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GD604_03390 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GD604_15095 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D GD604_05020 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D GD604_16795 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GD604_17715 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GD604_12485 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D GD604_09265 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:dsx00785] D GD604_07155 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D GD604_11290 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_11135 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D GD604_11140 aminotransferase class V-fold PLP-dependent enzyme K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D GD604_09960 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GD604_11130 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dsx00790] D GD604_12200 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D GD604_18065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D GD604_09115 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D GD604_13175 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D GD604_13435 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D GD604_02845 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D GD604_02645 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D GD604_11740 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D GD604_00860 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D GD604_01840 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D GD604_02375 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D GD604_07115 GAK system ATP-grasp enzyme K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D GD604_08480 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D GD604_08710 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D GD604_07360 molybdenum cofactor biosynthesis protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D GD604_15410 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D GD604_15685 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D GD604_16050 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D GD604_05860 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D GD604_08475 NTP transferase domain-containing protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dsx00670] D GD604_10695 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D GD604_03405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GD604_18030 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D GD604_15840 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GD604_17580 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GD604_00405 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D GD604_09960 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GD604_12760 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D GD604_09695 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D GD604_04570 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D GD604_11045 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D GD604_12665 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dsx00860] D GD604_03325 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GD604_09300 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D GD604_17945 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D GD604_01420 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D GD604_02805 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D GD604_15650 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D GD604_18035 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D GD604_09290 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D GD604_15315 AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D GD604_17955 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D GD604_02795 ahbC; 12,18-didecarboxysiroheme deacetylase K22226 ahbC; Fe-coproporphyrin III synthase D GD604_02810 ahbD; heme b synthase K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D GD604_16080 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D GD604_03680 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D GD604_03660 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D GD604_17925 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D GD604_16545 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D GD604_17930 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D GD604_01395 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D GD604_16550 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D GD604_03030 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D GD604_01390 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D GD604_02685 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D GD604_11845 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D GD604_06520 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D GD604_15425 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D GD604_00490 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D GD604_15655 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D GD604_04260 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dsx00130] D GD604_02980 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D GD604_08090 menaquinone biosynthesis decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D GD604_08075 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_08540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_14710 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D GD604_09315 solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D GD604_01550 CofH family radical SAM protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D GD604_18165 amidohydrolase family protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D GD604_14550 mqnB; futalosine hydrolase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D GD604_07870 mqnC; dehypoxanthine futalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D GD604_14545 ABC transporter substrate-binding protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] D GD604_16530 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dsx00900] D GD604_05100 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D GD604_02740 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D GD604_10430 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D GD604_10600 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D GD604_13450 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D GD604_11705 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D GD604_08075 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_08540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_09880 NUDIX domain-containing protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D GD604_05095 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D GD604_14540 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D GD604_14030 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:dsx00903] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_06345 alpha/beta hydrolase fold domain-containing protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D GD604_12785 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:dsx00523] D GD604_15405 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D GD604_06510 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D GD604_11285 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D GD604_06515 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:dsx01055] D GD604_14390 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D GD604_06510 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D GD604_00155 acyl-CoA--6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein C 00332 Carbapenem biosynthesis [PATH:dsx00332] D GD604_17655 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D GD604_05225 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dsx00261] D GD604_14390 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D GD604_18170 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_04850 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D GD604_04930 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GD604_11040 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GD604_06445 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D GD604_08785 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dsx00521] D GD604_16055 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GD604_07640 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GD604_17260 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GD604_09940 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D GD604_15405 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D GD604_06510 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D GD604_11285 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D GD604_06515 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D GD604_16055 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:dsx00525] D GD604_15405 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D GD604_06510 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:dsx00401] D GD604_03160 prephenate dehydrogenase/arogenate dehydrogenase family protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_02125 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D GD604_03155 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D GD604_03150 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D GD604_11060 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D GD604_03390 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GD604_05020 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D GD604_03395 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D GD604_17855 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D GD604_07230 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D GD604_09535 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] C 00627 Aminobenzoate degradation [PATH:dsx00627] D GD604_15260 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D GD604_11520 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D GD604_14340 UbiD family decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61] D GD604_14345 vanillic acid non-oxidative decarboxylation protein K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61] D GD604_08075 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_08540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GD604_08525 UbiD family decarboxylase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:dsx00625] D GD604_05880 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D GD604_00825 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GD604_13205 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D GD604_12490 AAA family ATPase K02588 nifH; nitrogenase iron protein NifH D GD604_13185 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D GD604_13200 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:dsx00633] D GD604_08985 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D GD604_08990 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D GD604_12025 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D GD604_12020 pyruvate synthase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D GD604_11675 pyruvate ferredoxin oxidoreductase subunit gamma K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D GD604_12030 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D GD604_02670 dsrA; dissimilatory-type sulfite reductase subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D GD604_02675 dsrB; dissimilatory-type sulfite reductase subunit beta K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation D GD604_06345 alpha/beta hydrolase fold domain-containing protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:dsx00626] D GD604_05880 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GD604_01505 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dsx03020] D GD604_07610 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D GD604_07615 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D GD604_05520 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D GD604_08695 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dsx03010] D GD604_02365 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D GD604_14010 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D GD604_05420 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D GD604_05515 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D GD604_05475 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D GD604_08410 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D GD604_05370 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D GD604_05460 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D GD604_14210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D GD604_05385 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D GD604_05510 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D GD604_05365 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D GD604_05505 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D GD604_05455 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D GD604_12365 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D GD604_13655 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D GD604_05435 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D GD604_08415 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D GD604_05410 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D GD604_07990 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D GD604_09490 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D GD604_07595 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D GD604_05405 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D GD604_05390 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D GD604_05395 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D GD604_05450 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D GD604_05465 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D GD604_07605 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D GD604_08420 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D GD604_07600 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D GD604_07590 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D GD604_14205 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D GD604_05440 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D GD604_05485 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D GD604_05425 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D GD604_05525 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D GD604_05470 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D GD604_13635 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D GD604_02285 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D GD604_03500 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D GD604_05415 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D GD604_05400 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D GD604_05445 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D GD604_10615 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D GD604_03495 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D GD604_03365 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D GD604_10575 hypothetical protein K02902 RP-L28; large subunit ribosomal protein L28 D GD604_05430 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D GD604_05480 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D GD604_11915 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D GD604_03375 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D GD604_07570 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D GD604_06070 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D GD604_02280 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D GD604_05500 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D GD604_10255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D GD604_02575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dsx00970] D GD604_09730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_02570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_10245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_06375 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_09520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_06725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_10590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_06765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_13425 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_15065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GD604_07395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GD604_07330 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D GD604_10605 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GD604_00615 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GD604_00620 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GD604_06410 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GD604_12320 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GD604_07335 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GD604_07555 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GD604_08515 tRNA-His K14226 tRNA-His; tRNA His D GD604_02565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GD604_10250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GD604_14585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_11655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_08330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_01885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_09855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_03955 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GD604_06415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GD604_06060 tRNA-Met K14230 tRNA-Met; tRNA Met D GD604_09180 tRNA-Met K14230 tRNA-Met; tRNA Met D GD604_10410 tRNA-Ile K14230 tRNA-Met; tRNA Met D GD604_16705 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D GD604_08245 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GD604_11955 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GD604_09760 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GD604_02450 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_08240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_09085 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_09010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_07545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GD604_07040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GD604_07560 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GD604_07575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D GD604_07550 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D GD604_02265 tRNA-Val K14237 tRNA-Val; tRNA Val D GD604_07390 tRNA-Val K14237 tRNA-Val; tRNA Val D GD604_06505 tRNA-Val K14237 tRNA-Val; tRNA Val D GD604_12560 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D GD604_03325 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GD604_06645 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D GD604_13105 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D GD604_06640 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D GD604_01275 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D GD604_01945 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D GD604_00415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GD604_10260 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D GD604_07980 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D GD604_07985 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D GD604_02270 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D GD604_17115 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D GD604_03710 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D GD604_12725 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D GD604_03945 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D GD604_00405 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D GD604_17835 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D GD604_02825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GD604_10310 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D GD604_15070 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D GD604_11065 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GD604_13445 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D GD604_00420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D GD604_02290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D GD604_02295 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D GD604_02975 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GD604_04405 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dsx03060] D GD604_05490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GD604_07580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GD604_09860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GD604_09460 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D GD604_17225 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D GD604_09465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GD604_06085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GD604_15320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GD604_13660 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D GD604_10270 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GD604_07995 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D GD604_05335 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D GD604_17220 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D GD604_03780 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D GD604_15390 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D GD604_10315 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dsx04122] D GD604_05245 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_11090 preprotein translocase subunit TatB K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GD604_01010 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GD604_01855 DUF814 domain-containing protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D GD604_06660 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D GD604_07360 molybdenum cofactor biosynthesis protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D GD604_08480 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D GD604_15955 hypothetical protein K03636 moaD; sulfur-carrier protein D GD604_15960 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D GD604_08710 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D GD604_15410 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D GD604_04390 hypothetical protein K03154 thiS; sulfur carrier protein D GD604_05040 MoaD/ThiS family protein K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:dsx03018] D GD604_07805 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D GD604_10690 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GD604_12370 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D GD604_03245 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D GD604_03555 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D GD604_10630 transcription termination factor Rho K03628 rho; transcription termination factor Rho D GD604_02955 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D GD604_13995 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_06620 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GD604_01340 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GD604_00380 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dsx03030] D GD604_08600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GD604_11745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GD604_11690 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GD604_17595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GD604_15250 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GD604_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GD604_08425 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D GD604_09475 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D GD604_05615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GD604_07105 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D GD604_13630 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D GD604_08780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dsx03410] D GD604_11080 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D GD604_07535 NUDIX domain-containing protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D GD604_10040 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D GD604_09570 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D GD604_12650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D GD604_03865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GD604_08780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dsx03420] D GD604_07955 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D GD604_10750 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D GD604_08765 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D GD604_07910 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D GD604_14580 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_14595 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_14815 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_08780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GD604_04035 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] C 03430 Mismatch repair [PATH:dsx03430] D GD604_07895 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D GD604_09480 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D GD604_08740 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D GD604_14580 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_14595 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_14815 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_05085 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D GD604_05090 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D GD604_03865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GD604_05615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GD604_11745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GD604_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GD604_11690 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GD604_15250 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GD604_17595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GD604_08600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GD604_08780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:dsx03440] D GD604_03865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GD604_05615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GD604_07975 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D GD604_11680 recR; recombination protein RecR K06187 recR; recombination protein RecR D GD604_01940 recA; recombinase RecA K03553 recA; recombination protein RecA D GD604_09705 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D GD604_09700 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D GD604_09710 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D GD604_11670 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GD604_11745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GD604_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GD604_11690 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GD604_15250 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GD604_17595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GD604_08600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GD604_12925 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dsx02010] D GD604_05060 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D GD604_05540 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D GD604_05545 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D GD604_05550 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D GD604_12005 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D GD604_12010 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D GD604_12015 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D GD604_12985 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D GD604_09240 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D GD604_12980 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D GD604_09235 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D GD604_12990 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D GD604_06440 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein D GD604_11495 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GD604_09200 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GD604_11500 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D GD604_09210 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D GD604_11505 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GD604_09205 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GD604_04475 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D GD604_08265 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D GD604_04490 ABC transporter permease subunit K11070 potC; spermidine/putrescine transport system permease protein D GD604_08270 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D GD604_04485 ABC transporter permease subunit K11071 potB; spermidine/putrescine transport system permease protein D GD604_08275 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D GD604_04480 ATP-binding cassette domain-containing protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D GD604_08280 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D GD604_00175 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GD604_00180 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GD604_11250 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D GD604_11245 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_00260 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_10365 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_12590 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_11240 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_12580 STAS domain-containing protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_00250 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_10375 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_12585 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_13975 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_00255 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_10370 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_16765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D GD604_16625 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D GD604_16500 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D GD604_16635 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D GD604_16640 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D GD604_16630 ATP-binding cassette domain-containing protein K23537 nupA; general nucleoside transport system ATP-binding protein D GD604_08915 extracellular solute-binding protein K17321 glpV; glycerol transport system substrate-binding protein D GD604_08900 ABC transporter permease subunit K17322 glpP; glycerol transport system permease protein D GD604_08905 ABC transporter permease subunit K17323 glpQ; glycerol transport system permease protein D GD604_08890 ATP-binding cassette domain-containing protein K17324 glpS; glycerol transport system ATP-binding protein D GD604_08895 ATP-binding cassette domain-containing protein K17325 glpT; glycerol transport system ATP-binding protein D GD604_17020 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D GD604_17025 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D GD604_17030 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D GD604_17890 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D GD604_02395 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D GD604_02385 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D GD604_02390 ABC transporter permease subunit K10003 gltJ; glutamate/aspartate transport system permease protein D GD604_02380 ATP-binding cassette domain-containing protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D GD604_07670 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_13135 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_15785 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_15790 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_16170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_17415 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_00805 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_02170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_02175 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_03560 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_04170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_05300 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_06870 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_06980 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_13130 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_16165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_17420 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_02165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_05305 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_06860 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_06990 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_13125 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_16160 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D GD604_17425 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_02160 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_05310 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_06865 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_06985 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_13120 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_16175 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_17430 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_02155 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_05315 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_06845 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_13115 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_16155 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_17435 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_02150 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_05320 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_06875 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_13300 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D GD604_13290 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D GD604_13295 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D GD604_09450 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D GD604_09440 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D GD604_09435 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D GD604_08355 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D GD604_09455 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D GD604_09445 hypothetical protein K16915 cbiL; nickel transport protein D GD604_05010 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D GD604_06750 hypothetical protein K16783 bioN; biotin transport system permease protein D GD604_05005 ATP-binding cassette domain-containing protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D GD604_03625 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D GD604_03630 hypothetical protein K09688 kpsM; capsular polysaccharide transport system permease protein D GD604_03635 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D GD604_15075 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D GD604_15080 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D GD604_05285 cytochrome C biogenesis protein CcmC K02195 ccmC; heme exporter protein C D GD604_05270 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B D GD604_05265 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D GD604_16075 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D GD604_16070 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D GD604_10355 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB C 02060 Phosphotransferase system (PTS) [PATH:dsx02060] D GD604_17320 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D GD604_17315 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D GD604_09055 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D GD604_17310 PTS cellobiose transporter subunit IIA K02796 manZ; mannose PTS system EIID component D GD604_09045 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:dsx03070] D GD604_17100 TolC family protein K12340 tolC; outer membrane protein D GD604_10350 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D GD604_10355 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D GD604_09460 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D GD604_17225 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D GD604_07580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GD604_09860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GD604_05490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GD604_09465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GD604_06085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GD604_15320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GD604_10270 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GD604_13660 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D GD604_07995 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D GD604_05335 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D GD604_17220 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D GD604_03780 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:dsx02020] D GD604_17895 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GD604_04450 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GD604_17900 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D GD604_15105 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D GD604_18065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D GD604_17020 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D GD604_10595 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D GD604_09655 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D GD604_10015 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D GD604_02755 flagellin K02406 fliC; flagellin D GD604_05535 flagellin K02406 fliC; flagellin D GD604_06790 flagellin K02406 fliC; flagellin D GD604_07070 hypothetical protein K02406 fliC; flagellin D GD604_08120 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D GD604_12125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_03485 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_05580 motility protein A K02556 motA; chemotaxis protein MotA D GD604_07450 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GD604_14410 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D GD604_14405 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D GD604_14425 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D GD604_14420 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D GD604_14415 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D GD604_00005 chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein D GD604_09685 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D GD604_03005 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D GD604_14375 PAS domain-containing protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D GD604_07530 HAMP domain-containing protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D GD604_12245 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D GD604_00055 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01555 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_13540 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D GD604_00075 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D GD604_13535 BON domain-containing protein K02280 cpaC; pilus assembly protein CpaC D GD604_00080 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D GD604_13525 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D GD604_00085 pilus assembly protein TadA K02282 cpaE; pilus assembly protein CpaE D GD604_13520 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D GD604_13515 type II secretion protein F K12510 tadB; tight adherence protein B D GD604_00090 hypothetical protein K12510 tadB; tight adherence protein B D GD604_13510 type II secretion system F family protein K12511 tadC; tight adherence protein C D GD604_00110 hypothetical protein K12511 tadC; tight adherence protein C D GD604_13775 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D GD604_13780 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D GD604_13060 GAF domain-containing protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D GD604_16570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00150 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_01185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_02005 hypothetical protein K02584 nifA; Nif-specific regulatory protein D GD604_05205 GAF domain-containing protein K02584 nifA; Nif-specific regulatory protein D GD604_07220 GAF domain-containing protein K02584 nifA; Nif-specific regulatory protein D GD604_10890 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D GD604_15775 AAA domain-containing protein K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_15935 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_01015 PAS domain S-box protein K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_10885 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_16935 periplasmic heavy metal sensor K07803 zraP; zinc resistance-associated protein D GD604_11010 response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_13545 response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_09615 PAS domain-containing protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_09630 AAA family ATPase K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_09035 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D GD604_06225 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D GD604_11940 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_05075 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_08210 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_11315 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_12410 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_12885 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_13810 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14500 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14525 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14620 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_15720 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_16425 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_02615 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_03930 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_03940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04185 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04220 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04315 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_05190 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_09195 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_09225 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10075 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10150 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10830 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_05185 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_11930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_16420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_17470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_07950 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_08205 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_11920 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_12385 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_16410 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17660 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17665 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05180 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_08200 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17635 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_11925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_12380 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_16405 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01985 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_05715 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_08195 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_10275 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_11950 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_08215 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_11710 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_13255 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_08980 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_15710 hypothetical protein K13486 wspC; chemotaxis protein methyltransferase WspC D GD604_11510 DUF3365 domain-containing protein K13487 wspA; methyl-accepting chemotaxis protein WspA D GD604_15715 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D GD604_15705 hypothetical protein K13489 wspD; chemotaxis-related protein WspD D GD604_15700 response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D GD604_15695 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D GD604_00145 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D GD604_03000 PAS domain S-box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D GD604_13020 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D GD604_13940 AAA domain-containing protein K10943 flrC; two-component system, response regulator FlrC D GD604_02380 ATP-binding cassette domain-containing protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D GD604_02385 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D GD604_02390 ABC transporter permease subunit K10003 gltJ; glutamate/aspartate transport system permease protein D GD604_02395 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D GD604_13740 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_16510 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_01720 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_08095 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_01600 response regulator K15012 regA; two-component system, response regulator RegA D GD604_01435 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D GD604_01430 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D GD604_17100 TolC family protein K12340 tolC; outer membrane protein D GD604_17620 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D GD604_01030 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein D GD604_09845 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D GD604_11630 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_11635 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_12415 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_16975 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_17550 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_18010 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_00580 PAS domain S-box protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_04345 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_08575 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_11825 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D GD604_12235 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dsx02024] D GD604_03155 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D GD604_03150 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GD604_14405 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D GD604_02465 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D GD604_02470 amino acid permease K20265 gadC; glutamate:GABA antiporter D GD604_07670 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_13135 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_15785 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_15790 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_16170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_17415 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_00805 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_02170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_02175 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_03560 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_04170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_05300 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_06870 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_06980 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_13130 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_16165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_17420 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_02165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_05305 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_06860 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_06990 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_13125 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_16160 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D GD604_17425 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_02160 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_05310 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_06865 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_06985 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_13120 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_16175 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_17430 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_02155 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_05315 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_06845 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_13115 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_16155 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_17435 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_02150 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_05320 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_06875 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_01255 MBL fold metallo-hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D GD604_05105 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_06850 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_13740 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_16510 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_01720 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_08095 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_03435 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D GD604_09885 EamA-like transporter family protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D GD604_03585 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GD604_08545 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GD604_06370 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D GD604_08550 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D GD604_06365 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GD604_08555 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GD604_11875 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GD604_08560 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GD604_11870 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D GD604_08565 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D GD604_06085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GD604_07580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GD604_09860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GD604_05490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GD604_09465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GD604_15320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GD604_10270 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GD604_13660 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:dsx02030] D GD604_11315 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_12410 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_12885 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_13810 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14500 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14525 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14620 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_15720 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_16425 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_02615 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_03930 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_03940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04185 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04220 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04315 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_05190 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_09195 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_09225 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10075 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10150 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10830 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_11920 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_12385 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_16410 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17660 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17665 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05180 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_08200 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05185 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_11930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_16420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_17470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_07950 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_08205 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_17635 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_11925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_12380 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_16405 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01985 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_05715 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_08195 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_10275 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_17540 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D GD604_10340 hypothetical protein K03414 cheZ; chemotaxis protein CheZ D GD604_01495 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D GD604_11950 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_08215 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_11710 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_13255 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_08980 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_08165 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D GD604_11940 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_05075 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_08210 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_15870 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D GD604_13150 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D GD604_00335 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GD604_12125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_03485 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_05580 motility protein A K02556 motA; chemotaxis protein MotA D GD604_07450 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GD604_12120 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_02705 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_03490 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_05585 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_07445 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:dsx02040] D GD604_15860 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D GD604_15865 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D GD604_15870 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D GD604_15875 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D GD604_15880 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D GD604_18155 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D GD604_06775 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D GD604_00340 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D GD604_08115 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D GD604_13150 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D GD604_00335 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GD604_00330 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D GD604_00325 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D GD604_00320 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D GD604_08145 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D GD604_08135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D GD604_08140 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D GD604_12280 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D GD604_15850 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D GD604_15855 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D GD604_06780 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D GD604_06785 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D GD604_09275 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D GD604_12290 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D GD604_12285 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D GD604_12275 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D GD604_12270 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D GD604_12265 peptidoglycan DD-metalloendopeptidase family protein K02395 flgJ; peptidoglycan hydrolase FlgJ D GD604_12255 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D GD604_12250 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D GD604_02755 flagellin K02406 fliC; flagellin D GD604_05535 flagellin K02406 fliC; flagellin D GD604_06790 flagellin K02406 fliC; flagellin D GD604_07070 hypothetical protein K02406 fliC; flagellin D GD604_02760 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D GD604_02765 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D GD604_12125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_03485 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_05580 motility protein A K02556 motA; chemotaxis protein MotA D GD604_07450 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GD604_12120 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_02705 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_03490 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_05585 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_07445 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_12235 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D GD604_09470 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D GD604_13020 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D GD604_09035 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D GD604_13940 AAA domain-containing protein K10943 flrC; two-component system, response regulator FlrC D GD604_08120 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D GD604_10690 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D GD604_12760 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:dsx01501] D GD604_12880 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D GD604_01245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_02225 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_08260 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_01240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_02230 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_17100 TolC family protein K12340 tolC; outer membrane protein D GD604_13750 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GD604_02880 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D GD604_14145 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GD604_10160 blaOXA; class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:dsx01502] D GD604_03005 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D GD604_12145 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GD604_08745 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D GD604_14135 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D GD604_14130 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D GD604_14115 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dsx01503] D GD604_12970 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_02320 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_09325 tetratricopeptide repeat protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_10595 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D GD604_01245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_02225 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_08260 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_01240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_02230 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_17100 TolC family protein K12340 tolC; outer membrane protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dsx01000] C 01001 Protein kinases [BR:dsx01001] D GD604_15435 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D GD604_00035 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D GD604_11735 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D GD604_17675 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D GD604_08380 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D GD604_17895 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GD604_04450 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GD604_14410 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D GD604_14375 PAS domain-containing protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D GD604_07530 HAMP domain-containing protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D GD604_10890 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D GD604_14605 PAS domain S-box protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_15930 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_16280 GHKL domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_16290 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_16680 PAS domain S-box protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_01605 PAS domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_05875 PAS domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_09585 response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_09605 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_11920 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_12385 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_16410 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17660 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17665 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05180 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_08200 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_15700 response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D GD604_00145 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D GD604_03000 PAS domain S-box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D GD604_11630 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_11635 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_12415 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_16975 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_17550 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_18010 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_00580 PAS domain S-box protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_04345 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_08575 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_11640 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D GD604_12130 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D GD604_12900 PAS domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:dsx01009] D GD604_17850 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_02200 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GD604_00130 SpoIIE family protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D GD604_13585 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:dsx01002] D GD604_10315 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D GD604_03815 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D GD604_16320 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D GD604_03820 hybD; HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D GD604_04710 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D GD604_05330 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D GD604_14310 DUF459 domain-containing protein K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-] D GD604_10285 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D GD604_09925 4Fe-4S dicluster domain-containing protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D GD604_02325 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GD604_11430 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D GD604_17500 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D GD604_02440 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D GD604_00155 acyl-CoA--6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein D GD604_03650 DJ-1/PfpI/YhbO family deglycase/protease K05520 yhbO; deglycase [EC:3.5.1.124] D GD604_14285 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D GD604_03005 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D GD604_02405 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-] D GD604_13270 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D GD604_04885 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D GD604_05495 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D GD604_07880 M24 family metallopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D GD604_06120 M24 family metallopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D GD604_07940 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D GD604_13180 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D GD604_07540 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D GD604_12950 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D GD604_02745 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D GD604_08570 aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D GD604_10595 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D GD604_01380 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D GD604_07780 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D GD604_15265 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D GD604_15925 response regulator K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D GD604_07790 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D GD604_01100 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GD604_15390 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D GD604_11340 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D GD604_02370 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D GD604_06435 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D GD604_06910 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D GD604_14875 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D GD604_15145 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D GD604_13670 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D GD604_10665 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin D GD604_17250 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D GD604_17255 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:dsx01003] D GD604_00870 glycosyltransferase K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356] D GD604_17535 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D GD604_10455 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D GD604_12960 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D GD604_13750 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GD604_04530 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dsx01005] D GD604_01510 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D GD604_17525 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D GD604_17520 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D GD604_09030 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D GD604_17515 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D GD604_00240 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D GD604_08370 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D GD604_15640 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D GD604_06600 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D GD604_08735 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D GD604_11450 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dsx01011] D GD604_07385 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D GD604_14105 FAD-binding protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D GD604_14110 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D GD604_14125 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D GD604_14140 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D GD604_12145 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GD604_08745 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D GD604_01815 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D GD604_14130 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D GD604_14115 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D GD604_09175 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GD604_10045 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D GD604_13750 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GD604_12960 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D GD604_02880 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D GD604_14145 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GD604_01380 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D GD604_03005 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D GD604_14310 DUF459 domain-containing protein K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-] D GD604_01790 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D GD604_01950 transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D GD604_17375 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D GD604_06285 peptidoglycan-binding protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D GD604_07190 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D GD604_13610 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D GD604_00595 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D GD604_12970 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_02320 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_09325 tetratricopeptide repeat protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:dsx01004] D GD604_11060 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D GD604_03385 fabH; beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D GD604_03400 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GD604_03390 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GD604_15095 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D GD604_05020 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D GD604_07090 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D GD604_12700 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_06165 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_08605 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_10545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GD604_14445 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GD604_05105 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_06850 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_12715 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D GD604_03380 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D GD604_17575 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D GD604_13990 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:dsx01008] D GD604_14390 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:dsx01006] D GD604_05095 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D GD604_14540 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D GD604_14030 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D GD604_09330 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D GD604_02980 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:dsx01007] D GD604_03325 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GD604_01275 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D GD604_02975 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GD604_04405 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D GD604_12725 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D GD604_11065 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GD604_03945 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D GD604_10310 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D GD604_17835 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D GD604_02825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GD604_15070 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D GD604_00415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GD604_10260 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D GD604_00420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D GD604_07980 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D GD604_07985 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D GD604_17115 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D GD604_13445 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D GD604_02270 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D GD604_01945 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D GD604_02290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D GD604_02295 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D GD604_00560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D GD604_13665 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D GD604_10100 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D GD604_09110 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D GD604_06755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-] D GD604_02125 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GD604_16795 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GD604_17715 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GD604_16110 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D GD604_17945 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D GD604_01420 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D GD604_11695 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GD604_02645 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D GD604_09220 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D GD604_13410 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D GD604_11465 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D GD604_13330 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D GD604_13385 LegC family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dsx00194] D GD604_02925 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D GD604_02930 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D GD604_02920 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D GD604_02915 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D GD604_02910 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D GD604_02905 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D GD604_02895 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D GD604_02900 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D GD604_00475 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D GD604_00470 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D GD604_00460 ATPase F0F1 K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dsx03000] D GD604_15895 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GD604_04910 helix-turn-helix domain-containing protein K13652 K13652; AraC family transcriptional regulator D GD604_08885 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D GD604_08930 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D GD604_11220 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D GD604_17935 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GD604_11170 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D GD604_02520 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D GD604_09660 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D GD604_14355 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GD604_00630 ATP-binding protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D GD604_01235 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D GD604_10995 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D GD604_13285 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GD604_16505 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GD604_18105 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D GD604_13740 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_16510 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_01720 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_08095 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GD604_16345 cyclic nucleotide-binding domain-containing protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D GD604_01120 helix-turn-helix domain-containing protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D GD604_16275 cyclic nucleotide-binding domain-containing protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D GD604_02025 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GD604_10645 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GD604_09645 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D GD604_09265 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D GD604_04800 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D GD604_13020 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D GD604_04655 PAS domain S-box protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D GD604_02005 hypothetical protein K02584 nifA; Nif-specific regulatory protein D GD604_05205 GAF domain-containing protein K02584 nifA; Nif-specific regulatory protein D GD604_07220 GAF domain-containing protein K02584 nifA; Nif-specific regulatory protein D GD604_16555 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D GD604_03610 tyrosine-type recombinase/integrase K02019 modE; molybdate transport system regulatory protein D GD604_04775 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D GD604_04870 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D GD604_09250 tyrosine-type recombinase/integrase K02019 modE; molybdate transport system regulatory protein D GD604_00480 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D GD604_03250 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D GD604_14050 helix-turn-helix domain-containing protein K07727 K07727; putative transcriptional regulator D GD604_12205 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D GD604_14350 aldehyde dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GD604_02535 ribbon-helix-helix domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D GD604_14035 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D GD604_00235 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GD604_10625 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D GD604_06610 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D GD604_14270 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D GD604_14255 PspC domain-containing protein K03973 pspC; phage shock protein C D GD604_15120 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D GD604_02545 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D GD604_07320 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GD604_08360 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D GD604_14160 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dsx03021] D GD604_05520 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D GD604_07610 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D GD604_07615 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D GD604_08695 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D GD604_09470 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D GD604_14935 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D GD604_12765 sigma-70 family RNA polymerase sigma factor K03089 rpoH; RNA polymerase sigma-32 factor D GD604_09035 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D GD604_08120 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D GD604_12330 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D GD604_02835 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D GD604_07585 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D GD604_14060 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_14640 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_15690 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_16700 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_17680 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_17820 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_03225 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_06340 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_08405 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_08690 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GD604_11730 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D GD604_17670 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist D GD604_00245 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D GD604_01715 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist D GD604_08385 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D GD604_11735 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D GD604_17675 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D GD604_08380 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D GD604_02545 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D GD604_07320 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GD604_08360 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D GD604_11885 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D GD604_10630 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dsx03019] D GD604_07805 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D GD604_06795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D GD604_13995 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D GD604_02955 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D GD604_03555 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D GD604_03460 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D GD604_03245 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D GD604_10690 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GD604_12370 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D GD604_10630 transcription termination factor Rho K03628 rho; transcription termination factor Rho D GD604_14670 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_15660 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D GD604_06620 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GD604_01340 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GD604_00380 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D GD604_12245 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D GD604_09050 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:dsx03011] D GD604_02365 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D GD604_14010 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D GD604_05420 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D GD604_05515 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D GD604_05475 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D GD604_08410 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D GD604_05370 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D GD604_05460 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D GD604_14210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D GD604_05385 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D GD604_05510 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D GD604_05365 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D GD604_05505 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D GD604_05455 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D GD604_12365 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D GD604_13655 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D GD604_05435 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D GD604_08415 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D GD604_05410 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D GD604_07990 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D GD604_09490 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D GD604_07595 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D GD604_05405 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D GD604_05390 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D GD604_05395 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D GD604_05450 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D GD604_05465 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D GD604_08420 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D GD604_07600 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D GD604_07590 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D GD604_07605 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D GD604_14205 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D GD604_05440 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D GD604_05485 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D GD604_05425 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D GD604_05525 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D GD604_05470 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D GD604_13635 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D GD604_02285 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D GD604_03500 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D GD604_05415 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D GD604_05400 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D GD604_05445 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D GD604_03495 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D GD604_03365 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D GD604_10575 hypothetical protein K02902 RP-L28; large subunit ribosomal protein L28 D GD604_05430 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D GD604_05480 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D GD604_11915 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D GD604_03375 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D GD604_07570 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D GD604_06070 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D GD604_02280 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D GD604_05500 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D GD604_10615 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D GD604_10255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D GD604_02575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dsx03009] D GD604_06795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D GD604_00350 GTPase Era K03595 era; GTPase D GD604_00315 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D GD604_02545 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D GD604_07320 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GD604_08360 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D GD604_12330 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D GD604_02835 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D GD604_07585 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D GD604_09505 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D GD604_00395 RNA methyltransferase RsmF K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D GD604_09340 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D GD604_09965 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D GD604_12695 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D GD604_14155 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D GD604_11830 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D GD604_08445 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D GD604_07195 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D GD604_09720 methyltransferase domain-containing protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D GD604_12685 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D GD604_14635 hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D GD604_00375 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D GD604_17285 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D GD604_09140 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D GD604_06975 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D GD604_04295 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D GD604_06905 coaE; dephospho-CoA kinase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D GD604_09875 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D GD604_13645 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D GD604_02340 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D GD604_07345 tetratricopeptide repeat protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D GD604_14315 methyltransferase domain-containing protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D GD604_07805 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D GD604_13615 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D GD604_13090 ribosome biogenesis GTPase Der K03977 engA; GTPase D GD604_15835 hflX; GTPase HflX K03665 hflX; GTPase D GD604_10480 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D GD604_03590 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D GD604_12350 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D GD604_12325 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D GD604_08815 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D GD604_07300 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D GD604_09040 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D GD604_03020 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D GD604_03370 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dsx03016] D GD604_09100 CBS domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D GD604_09270 HD domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D GD604_08795 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D GD604_03325 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GD604_13445 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D GD604_10310 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D GD604_02825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GD604_03945 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D GD604_01275 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D GD604_11065 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GD604_15070 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D GD604_00415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GD604_01945 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D GD604_10260 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D GD604_02270 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D GD604_17115 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D GD604_12725 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D GD604_17835 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D GD604_00420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D GD604_02290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D GD604_02295 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D GD604_02975 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GD604_04405 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D GD604_00605 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D GD604_07795 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D GD604_17870 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D GD604_12360 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D GD604_05245 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_10480 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D GD604_09330 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D GD604_14220 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D GD604_04880 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D GD604_05820 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D GD604_16040 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D GD604_06075 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D GD604_10425 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D GD604_12040 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1] D GD604_02110 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D GD604_07235 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D GD604_07980 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D GD604_07985 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D GD604_09015 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D GD604_11700 tRNA-dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D GD604_11385 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D GD604_03900 MiaB/RimO family radical SAM methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D GD604_14690 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D GD604_16535 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D GD604_13640 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D GD604_05660 tRNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D GD604_06490 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D GD604_10055 methyltransferase domain-containing protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D GD604_07010 RsmB/NOP family class I SAM-dependent RNA methyltransferase K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D GD604_01855 DUF814 domain-containing protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D GD604_06660 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D GD604_04385 phosphoadenosine phosphosulfate reductase family protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D GD604_08155 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D GD604_11090 preprotein translocase subunit TatB K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GD604_01010 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GD604_15110 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein D GD604_15115 adhesin K13628 iscA; iron-sulfur cluster assembly protein D GD604_07160 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D GD604_11740 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D GD604_01385 4Fe-4S dicluster domain-containing protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D GD604_07810 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D GD604_11120 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D GD604_09310 adenylate kinase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D GD604_02750 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D GD604_09375 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D GD604_04935 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D GD604_03555 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D GD604_12370 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dsx03012] D GD604_12340 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D GD604_02275 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D GD604_11055 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D GD604_14015 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D GD604_05380 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GD604_07565 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GD604_16435 elongation factor G K02355 fusA; elongation factor G D GD604_05375 fusA; elongation factor G K02355 fusA; elongation factor G D GD604_09350 fusA; elongation factor G K02355 fusA; elongation factor G D GD604_03690 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D GD604_11905 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D GD604_14025 ribosome recycling factor K02838 frr; ribosome recycling factor D GD604_11900 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D GD604_10620 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D GD604_07930 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D GD604_09155 efp; elongation factor P K02356 efp; elongation factor P D GD604_16095 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:dsx03110] D GD604_08230 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D GD604_10990 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D GD604_03275 AAA domain-containing protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D GD604_07785 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D GD604_15140 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D GD604_02200 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GD604_06620 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GD604_01340 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GD604_08700 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D GD604_11000 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D GD604_06615 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D GD604_15480 Hsp20 family protein K13993 HSP20; HSP20 family protein D GD604_17105 Hsp20 family protein K13993 HSP20; HSP20 family protein D GD604_02210 Hsp20 family protein K13993 HSP20; HSP20 family protein D GD604_02215 Hsp20 family protein K13993 HSP20; HSP20 family protein D GD604_01335 co-chaperone GroES K04078 groES; chaperonin GroES D GD604_10595 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D GD604_13180 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D GD604_07540 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D GD604_00470 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D GD604_18085 periplasmic heavy metal sensor K06006 cpxP; periplasmic protein CpxP/Spy D GD604_03315 periplasmic heavy metal sensor K06006 cpxP; periplasmic protein CpxP/Spy D GD604_16935 periplasmic heavy metal sensor K07803 zraP; zinc resistance-associated protein D GD604_07830 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D GD604_07825 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D GD604_00770 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D GD604_10770 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D GD604_15360 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D GD604_07965 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D GD604_04135 thioredoxin fold domain-containing protein K03671 TXN; thioredoxin D GD604_09370 trxA; thioredoxin K03671 TXN; thioredoxin D GD604_16005 thioredoxin fold domain-containing protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8] C 04131 Membrane trafficking [BR:dsx04131] D GD604_06535 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D GD604_15175 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GD604_16335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GD604_09670 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GD604_03050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GD604_02200 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:dsx03051] D GD604_02200 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:dsx03032] D GD604_07105 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D GD604_15895 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GD604_04035 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D GD604_13820 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D GD604_14510 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GD604_09500 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GD604_00600 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D GD604_06455 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D GD604_00005 chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein D GD604_09685 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D GD604_08425 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D GD604_09475 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D GD604_05615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GD604_11745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GD604_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GD604_15250 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GD604_17595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GD604_08600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GD604_11690 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GD604_13630 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D GD604_08780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GD604_00020 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D GD604_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D GD604_00520 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dsx03036] D GD604_15895 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GD604_06795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D GD604_13820 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D GD604_14510 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GD604_09500 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GD604_00600 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D GD604_06455 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D GD604_11000 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D GD604_00005 chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein D GD604_09685 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D GD604_14355 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GD604_14095 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D GD604_16070 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D GD604_14145 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GD604_09150 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D GD604_14100 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D GD604_14120 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D GD604_16075 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D GD604_14090 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D GD604_02945 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D GD604_02940 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB D GD604_12970 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_02320 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_09325 tetratricopeptide repeat protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GD604_01245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_02225 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_08260 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_02865 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GD604_09945 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GD604_02870 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D GD604_02885 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D GD604_11935 AAA family ATPase K03496 parA; chromosome partitioning protein D GD604_17125 AAA family ATPase K03496 parA; chromosome partitioning protein D GD604_00225 AAA family ATPase K03496 parA; chromosome partitioning protein D GD604_00235 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GD604_04880 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D GD604_12695 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D GD604_16535 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D GD604_09105 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D GD604_04640 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D GD604_09410 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D GD604_09165 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:dsx03400] D GD604_02855 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D GD604_03240 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GD604_07535 NUDIX domain-containing protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D GD604_11080 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D GD604_04035 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D GD604_11050 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GD604_12800 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GD604_10460 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GD604_16105 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D GD604_09570 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D GD604_10040 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D GD604_12650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D GD604_03865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GD604_08780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GD604_10750 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D GD604_08765 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D GD604_07910 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D GD604_14580 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_14595 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_14815 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GD604_07610 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D GD604_07615 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D GD604_05520 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D GD604_08695 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D GD604_07955 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D GD604_07895 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D GD604_09480 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D GD604_08740 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D GD604_05085 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D GD604_05090 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D GD604_11745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GD604_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GD604_15250 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GD604_17595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GD604_08600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GD604_11690 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GD604_05615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GD604_15900 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D GD604_11670 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GD604_01940 recA; recombinase RecA K03553 recA; recombination protein RecA D GD604_09705 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D GD604_09700 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D GD604_09710 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D GD604_12925 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D GD604_12735 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D GD604_07975 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D GD604_11680 recR; recombination protein RecR K06187 recR; recombination protein RecR D GD604_06360 AAA family ATPase K03631 recN; DNA repair protein RecN (Recombination protein N) D GD604_14630 hypothetical protein K03554 rdgC; recombination associated protein RdgC D GD604_04290 AAA family ATPase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D GD604_04285 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D GD604_14785 cas1e; type I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D GD604_06030 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D GD604_00020 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D GD604_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D GD604_00520 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D GD604_13820 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D GD604_14510 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GD604_09500 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GD604_00600 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D GD604_06455 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D GD604_02720 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D GD604_01105 DUF4113 domain-containing protein K03502 umuC; DNA polymerase V D GD604_01100 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GD604_10440 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D GD604_16065 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GD604_12355 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:dsx03029] D GD604_12340 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D GD604_02275 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D GD604_14015 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D GD604_05380 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GD604_07565 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GD604_16435 elongation factor G K02355 fusA; elongation factor G D GD604_05375 fusA; elongation factor G K02355 fusA; elongation factor G D GD604_09350 fusA; elongation factor G K02355 fusA; elongation factor G D GD604_00350 GTPase Era K03595 era; GTPase D GD604_02975 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GD604_02825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GD604_00415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GD604_11065 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GD604_06645 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D GD604_13105 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D GD604_06640 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D GD604_05615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GD604_15085 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D GD604_06620 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GD604_06615 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D GD604_01340 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GD604_01335 co-chaperone GroES K04078 groES; chaperonin GroES D GD604_08700 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D GD604_05245 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_04640 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D GD604_09410 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D GD604_06085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GD604_02200 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dsx02000] D GD604_10355 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D GD604_11805 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D GD604_04590 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D GD604_12985 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D GD604_09240 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D GD604_12980 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D GD604_09235 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D GD604_12990 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D GD604_06440 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein D GD604_05060 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D GD604_05540 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D GD604_05545 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D GD604_05550 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D GD604_12005 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D GD604_12010 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D GD604_12015 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D GD604_11495 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GD604_09200 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GD604_11500 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D GD604_09210 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D GD604_11505 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GD604_09205 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GD604_04475 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D GD604_08265 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D GD604_04490 ABC transporter permease subunit K11070 potC; spermidine/putrescine transport system permease protein D GD604_08270 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D GD604_04485 ABC transporter permease subunit K11071 potB; spermidine/putrescine transport system permease protein D GD604_08275 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D GD604_04480 ATP-binding cassette domain-containing protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D GD604_08280 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D GD604_14055 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D GD604_00175 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GD604_00180 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GD604_08915 extracellular solute-binding protein K17321 glpV; glycerol transport system substrate-binding protein D GD604_08900 ABC transporter permease subunit K17322 glpP; glycerol transport system permease protein D GD604_08905 ABC transporter permease subunit K17323 glpQ; glycerol transport system permease protein D GD604_08890 ATP-binding cassette domain-containing protein K17324 glpS; glycerol transport system ATP-binding protein D GD604_08895 ATP-binding cassette domain-containing protein K17325 glpT; glycerol transport system ATP-binding protein D GD604_16765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D GD604_16625 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D GD604_16500 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D GD604_16635 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D GD604_16640 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D GD604_16630 ATP-binding cassette domain-containing protein K23537 nupA; general nucleoside transport system ATP-binding protein D GD604_11245 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_00260 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_10365 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_12590 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GD604_11240 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_12580 STAS domain-containing protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_00250 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_10375 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GD604_12585 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_13975 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_00255 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_10370 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GD604_12595 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D GD604_00265 ABC transporter K18480 linN; cholesterol transport system auxiliary component D GD604_11250 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D GD604_00160 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D GD604_00165 ABC transporter permease subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D GD604_00170 ABC transporter permease subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein D GD604_17020 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D GD604_17025 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D GD604_17030 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D GD604_17890 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D GD604_02395 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D GD604_02385 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D GD604_02390 ABC transporter permease subunit K10003 gltJ; glutamate/aspartate transport system permease protein D GD604_02380 ATP-binding cassette domain-containing protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D GD604_07670 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_13135 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_15785 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_15790 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_16170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_17415 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_00805 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_02170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_02175 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_03560 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_04170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_05300 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_06870 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_06980 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GD604_13130 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_16165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_17420 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_02165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_05305 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_06860 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_06990 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GD604_13125 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_16160 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D GD604_17425 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_02160 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_05310 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_06865 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_06985 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GD604_13120 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_16175 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_17430 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_02155 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_05315 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_06845 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GD604_13115 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_16155 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_17435 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_02150 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_05320 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_06875 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GD604_11350 ABC transporter permease K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D GD604_06545 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D GD604_06540 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D GD604_13040 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_13260 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_18180 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_03450 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_04225 ehuB; ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_05695 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_10020 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GD604_13045 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D GD604_18185 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D GD604_18190 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D GD604_03285 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D GD604_05680 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D GD604_05690 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D GD604_13050 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D GD604_18175 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D GD604_05685 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D GD604_03585 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GD604_08545 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GD604_06370 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D GD604_08550 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D GD604_06365 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GD604_08555 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GD604_11875 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GD604_08560 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GD604_11870 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D GD604_08565 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D GD604_17445 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D GD604_06310 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D GD604_17450 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein D GD604_06320 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein D GD604_17455 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D GD604_06315 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D GD604_03665 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D GD604_03675 iron chelate uptake ABC transporter family permease subunit K25027 btuC; cobalamin transport system permease protein D GD604_03670 ATP-binding cassette domain-containing protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D GD604_13300 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D GD604_13290 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D GD604_13295 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D GD604_09440 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D GD604_09450 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D GD604_09435 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D GD604_08355 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D GD604_09455 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D GD604_09445 hypothetical protein K16915 cbiL; nickel transport protein D GD604_05010 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D GD604_06750 hypothetical protein K16783 bioN; biotin transport system permease protein D GD604_05005 ATP-binding cassette domain-containing protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D GD604_03630 hypothetical protein K09688 kpsM; capsular polysaccharide transport system permease protein D GD604_03625 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D GD604_03635 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D GD604_11190 ABC transporter permease subunit K25180 ybhR; drug efflux transport system permease protein D GD604_11185 ABC transporter permease subunit K25181 ybhS; drug efflux transport system permease protein D GD604_11180 ATP-binding cassette domain-containing protein K25182 ybhF; drug efflux transport system ATP-binding protein D GD604_11175 hlyD; secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG D GD604_15075 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D GD604_15080 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D GD604_05285 cytochrome C biogenesis protein CcmC K02195 ccmC; heme exporter protein C D GD604_05270 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B D GD604_05265 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D GD604_16075 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D GD604_16070 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D GD604_02035 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D GD604_11205 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein D GD604_11210 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D GD604_02030 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D GD604_09735 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D GD604_14615 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_15610 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_16560 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_17275 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_17720 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_07415 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_07495 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_07515 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_08665 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_08970 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GD604_15535 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_17270 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_17725 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_07095 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_07410 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_07520 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_08670 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_08975 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GD604_07840 ATP-binding cassette domain-containing protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D GD604_06295 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D GD604_01965 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D GD604_04095 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D GD604_04370 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D GD604_16395 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D GD604_17320 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D GD604_17315 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D GD604_09055 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D GD604_17310 PTS cellobiose transporter subunit IIA K02796 manZ; mannose PTS system EIID component D GD604_09045 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D GD604_08770 potassium channel protein K10716 kch; voltage-gated potassium channel D GD604_13785 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D GD604_16575 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D GD604_04250 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D GD604_14695 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D GD604_04980 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D GD604_10025 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D GD604_08250 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D GD604_12315 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D GD604_04105 yut; urea transporter K08717 utp; urea transporter D GD604_12125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_03485 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_05580 motility protein A K02556 motA; chemotaxis protein MotA D GD604_07450 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GD604_12120 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_02705 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_03490 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_05585 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_07445 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_07275 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D GD604_17765 protein TolR K03560 tolR; biopolymer transport protein TolR D GD604_07280 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D GD604_17230 magnesium transporter CorA family protein K03284 corA; magnesium transporter D GD604_01220 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D GD604_10840 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D GD604_03480 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D GD604_05250 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D GD604_00755 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D GD604_02410 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D GD604_04410 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D GD604_17100 TolC family protein K12340 tolC; outer membrane protein D GD604_07400 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system D GD604_17620 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D GD604_01030 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein D GD604_15085 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D GD604_09360 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D GD604_02625 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D GD604_02620 hypothetical protein K09800 tamB; translocation and assembly module TamB D GD604_05120 autotransporter domain-containing protein K21449 ata; trimeric autotransporter adhesin D GD604_06480 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D GD604_02470 amino acid permease K20265 gadC; glutamate:GABA antiporter D GD604_15725 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D GD604_01240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_02230 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_08925 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D GD604_16145 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family D GD604_04255 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D GD604_09885 EamA-like transporter family protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D GD604_14455 L-lactate permease K03303 lutP; lactate permease D GD604_10385 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D GD604_13725 cation acetate symporter K14393 actP; cation/acetate symporter D GD604_08585 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter D GD604_16590 potassium transporter KefB K26735 KEA4_5_6; K+:H+ antiporter D GD604_00305 potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein D GD604_00310 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D GD604_01930 uraA; uracil permease K02824 uraA; uracil permease D GD604_08940 tryptophan/tyrosine permease K03834 tyrP; tyrosine-specific transport protein D GD604_07025 CBS domain-containing protein K03281 clcA; chloride channel protein, CIC family D GD604_12420 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GD604_10295 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D GD604_00195 arsenic resistance protein K03325 ACR3; arsenite transporter D GD604_10650 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D GD604_16245 sodium:proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D GD604_16250 NADH-quinone oxidoreductase subunit J K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D GD604_16255 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GD604_16260 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GD604_16270 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GD604_01765 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GD604_01775 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GD604_16225 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D GD604_16230 pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D GD604_16235 sodium:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D GD604_10045 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D GD604_03775 trkD; potassium transporter Kup K03549 kup; KUP system potassium uptake protein D GD604_14085 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D GD604_15805 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D GD604_15800 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D GD604_05015 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D GD604_14120 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D GD604_08060 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D GD604_07295 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D GD604_07285 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D GD604_07290 translocation protein TolB K03641 tolB; TolB protein D GD604_04155 cytochrome C biosynthesis protein K06196 ccdA; cytochrome c-type biogenesis protein D GD604_00785 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D GD604_00780 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D GD604_16610 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D GD604_01660 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D GD604_11265 4Fe-4S dicluster domain-containing protein K23301 qrcC; menaquinone reductase, iron-sulfur cluster-binding subunit [EC:1.97.-.-] D GD604_11270 molybdopterin-dependent oxidoreductase K23302 qrcB; menaquinone reductase, molybdopterin-binding-like subunit D GD604_11260 molybdopterin oxidoreductase K23303 qrcD; menaquinone reductase, integral membrane subunit D GD604_04375 biotin/lipoyl-binding protein K03543 emrA; membrane fusion protein, multidrug efflux system D GD604_10350 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D GD604_01245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_02225 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_08260 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_09655 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D GD604_10015 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D GD604_10955 iron transporter FeoA K04758 feoA; ferrous iron transport protein A D GD604_10960 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D GD604_08340 iron transporter FeoA K04758 feoA; ferrous iron transport protein A D GD604_10875 iron transporter FeoA K04758 feoA; ferrous iron transport protein A D GD604_08345 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D GD604_10880 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D GD604_05260 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:dsx02044] D GD604_10355 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D GD604_10350 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D GD604_17100 TolC family protein K12340 tolC; outer membrane protein D GD604_03815 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D GD604_06225 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D GD604_00105 hypothetical protein K02652 pilB; type IV pilus assembly protein PilB D GD604_06210 general secretion pathway protein GspE K02652 pilB; type IV pilus assembly protein PilB D GD604_06220 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D GD604_06200 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D GD604_06175 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT D GD604_06180 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT D GD604_03810 LysM peptidoglycan-binding domain-containing protein K08086 fimV; pilus assembly protein FimV D GD604_16320 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D GD604_13540 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D GD604_00075 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D GD604_13535 BON domain-containing protein K02280 cpaC; pilus assembly protein CpaC D GD604_00080 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D GD604_13525 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D GD604_00085 pilus assembly protein TadA K02282 cpaE; pilus assembly protein CpaE D GD604_13520 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D GD604_13515 type II secretion protein F K12510 tadB; tight adherence protein B D GD604_00090 hypothetical protein K12510 tadB; tight adherence protein B D GD604_13510 type II secretion system F family protein K12511 tadC; tight adherence protein C D GD604_00110 hypothetical protein K12511 tadC; tight adherence protein C D GD604_00055 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01555 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_08015 YggT family protein K02221 yggT; YggT family protein D GD604_03430 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D GD604_03640 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D GD604_08135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D GD604_08140 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D GD604_15865 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D GD604_15875 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D GD604_15880 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D GD604_00335 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GD604_00330 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D GD604_00325 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D GD604_00320 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D GD604_08145 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D GD604_04410 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D GD604_15320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GD604_09460 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D GD604_07580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GD604_17225 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D GD604_09860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GD604_05490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GD604_13660 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D GD604_10270 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GD604_09465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GD604_06085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GD604_07995 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D GD604_05335 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D GD604_17220 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D GD604_03780 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dsx02042] D GD604_03480 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D GD604_05250 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:dsx02022] D GD604_17895 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GD604_04450 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GD604_17900 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D GD604_15105 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D GD604_14410 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D GD604_14405 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D GD604_16285 response regulator K02483 K02483; two-component system, OmpR family, response regulator D GD604_03565 response regulator K02483 K02483; two-component system, OmpR family, response regulator D GD604_07745 response regulator K02483 K02483; two-component system, OmpR family, response regulator D GD604_09600 response regulator K02483 K02483; two-component system, OmpR family, response regulator D GD604_14375 PAS domain-containing protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D GD604_07530 HAMP domain-containing protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D GD604_13060 GAF domain-containing protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D GD604_10890 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D GD604_15775 AAA domain-containing protein K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_15935 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_01015 PAS domain S-box protein K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_10885 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D GD604_11010 response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_13545 response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_09615 PAS domain-containing protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_09630 AAA family ATPase K07714 atoC; two-component system, NtrC family, response regulator AtoC D GD604_14605 PAS domain S-box protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_15930 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_16280 GHKL domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_16290 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_16680 PAS domain S-box protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_01605 PAS domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_05875 PAS domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_09585 response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_09605 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GD604_12465 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_13005 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_14400 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_17385 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_00140 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_00300 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_00550 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_00790 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_05870 response regulator K02481 flgR; two-component system, NtrC family, response regulator D GD604_11920 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_12385 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_16410 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17660 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17665 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05180 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_08200 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17635 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_11925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_12380 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_16405 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01985 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_05715 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_08195 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_10275 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_11950 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_08215 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_11710 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_13255 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_08980 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_15700 response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D GD604_15695 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D GD604_00145 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D GD604_03000 PAS domain S-box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D GD604_13940 AAA domain-containing protein K10943 flrC; two-component system, response regulator FlrC D GD604_01600 response regulator K15012 regA; two-component system, response regulator RegA D GD604_11630 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_11635 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_12415 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_16975 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_17550 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_18010 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_00580 PAS domain S-box protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_04345 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_08575 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D GD604_11825 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D GD604_11640 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D GD604_12130 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D GD604_12900 PAS domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:dsx02035] D GD604_11920 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_12385 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_16410 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17660 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_17665 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05180 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_08200 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GD604_05185 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_11930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_16420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_17470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_07950 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_08205 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GD604_01495 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D GD604_17540 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D GD604_08165 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D GD604_11940 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_05075 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_08210 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GD604_11950 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_08215 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GD604_17635 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_11925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_12380 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_16405 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_01985 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_05715 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_08195 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_10275 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GD604_10340 hypothetical protein K03414 cheZ; chemotaxis protein CheZ D GD604_11710 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_13255 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_08980 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D GD604_11315 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_12410 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_12885 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_13810 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14500 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14525 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_14620 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_15720 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_16425 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_02615 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_03930 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_03940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04185 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04220 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_04315 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_05190 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_09195 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_09225 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10075 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10150 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_10830 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GD604_15875 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D GD604_15880 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D GD604_18155 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D GD604_00330 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D GD604_00325 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D GD604_00320 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D GD604_08145 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D GD604_08135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D GD604_08140 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D GD604_15870 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D GD604_13150 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D GD604_00335 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GD604_15865 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D GD604_12270 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D GD604_12280 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D GD604_12275 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D GD604_00340 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D GD604_08115 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D GD604_15860 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D GD604_06775 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D GD604_15850 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D GD604_15855 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D GD604_06780 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D GD604_12290 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D GD604_12285 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D GD604_12265 peptidoglycan DD-metalloendopeptidase family protein K02395 flgJ; peptidoglycan hydrolase FlgJ D GD604_06785 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D GD604_09275 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D GD604_12255 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D GD604_12250 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D GD604_02755 flagellin K02406 fliC; flagellin D GD604_05535 flagellin K02406 fliC; flagellin D GD604_06790 flagellin K02406 fliC; flagellin D GD604_07070 hypothetical protein K02406 fliC; flagellin D GD604_02760 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D GD604_02765 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D GD604_08120 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D GD604_12125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_03485 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GD604_05580 motility protein A K02556 motA; chemotaxis protein MotA D GD604_07450 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GD604_12120 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_02705 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_03490 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_05585 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_07445 OmpA family protein K02557 motB; chemotaxis protein MotB D GD604_13020 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D GD604_13940 AAA domain-containing protein K10943 flrC; two-component system, response regulator FlrC D GD604_12240 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D GD604_12235 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D GD604_16150 hypothetical protein K06603 flaG; flagellar protein FlaG D GD604_08130 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D GD604_06460 P-loop NTPase K04562 flhG; flagellar biosynthesis protein FlhG D GD604_08125 P-loop NTPase K04562 flhG; flagellar biosynthesis protein FlhG D GD604_06175 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT D GD604_06180 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT D GD604_06225 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D GD604_00105 hypothetical protein K02652 pilB; type IV pilus assembly protein PilB D GD604_06210 general secretion pathway protein GspE K02652 pilB; type IV pilus assembly protein PilB D GD604_06220 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D GD604_03815 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D GD604_06200 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D GD604_00055 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01555 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_01565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D GD604_16320 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D GD604_13540 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D GD604_00075 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D GD604_13535 BON domain-containing protein K02280 cpaC; pilus assembly protein CpaC D GD604_00080 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D GD604_13525 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D GD604_00085 pilus assembly protein TadA K02282 cpaE; pilus assembly protein CpaE D GD604_13520 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dsx04812] D GD604_12405 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D GD604_02865 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GD604_09945 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GD604_14090 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D GD604_14095 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D GD604_11935 AAA family ATPase K03496 parA; chromosome partitioning protein D GD604_17125 AAA family ATPase K03496 parA; chromosome partitioning protein D GD604_00225 AAA family ATPase K03496 parA; chromosome partitioning protein D GD604_00235 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dsx04147] D GD604_02200 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GD604_10690 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GD604_15175 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GD604_16335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GD604_09870 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D GD604_03050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GD604_13760 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D GD604_03110 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D GD604_01340 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GD604_06620 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GD604_06740 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GD604_05325 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D GD604_05380 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GD604_07565 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GD604_00605 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D GD604_05105 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_06850 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GD604_17850 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D GD604_04900 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D GD604_07215 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D GD604_07210 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D GD604_13015 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D GD604_09380 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D GD604_01835 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D GD604_10450 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D GD604_08860 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D GD604_16570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_00150 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_01185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GD604_02805 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D GD604_18065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D GD604_03535 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_04355 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GD604_15840 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GD604_17580 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GD604_11145 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GD604_17995 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D GD604_09865 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GD604_09670 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:dsx02048] D GD604_14785 cas1e; type I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D GD604_06030 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D GD604_14790 type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D GD604_06035 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D GD604_06040 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D GD604_14755 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D GD604_02525 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D GD604_14760 casA; type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA D GD604_14765 casB; type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB D GD604_14770 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC D GD604_14775 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD D GD604_14780 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE D GD604_05990 cas10; type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1 D GD604_05995 csm2; type III-A CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2 D GD604_06000 csm3; type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3 D GD604_06005 hypothetical protein K19139 csm4; CRISPR-associated protein Csm4 D GD604_06010 hypothetical protein K19140 csm5; CRISPR-associated protein Csm5 D GD604_14825 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D GD604_15025 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D GD604_14830 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D GD604_15010 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D GD604_14835 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D GD604_14845 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D GD604_15005 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D GD604_15895 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GD604_14905 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D GD604_12295 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D GD604_18000 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D GD604_18005 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE D GD604_12550 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D GD604_13925 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D GD604_15980 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D GD604_02530 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D GD604_04430 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D GD604_10525 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D GD604_02535 ribbon-helix-helix domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D GD604_10505 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D GD604_03355 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D GD604_03360 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D GD604_04425 hypothetical protein K19159 yefM; antitoxin YefM D GD604_13215 addiction module toxin, HicA family K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D GD604_14070 addiction module toxin, HicA family K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D GD604_08085 addiction module toxin, HicA family K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D GD604_13220 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D GD604_14075 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D GD604_16115 toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D GD604_16490 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D GD604_14255 PspC domain-containing protein K03973 pspC; phage shock protein C D GD604_14260 hypothetical protein K03970 pspB; phage shock protein B D GD604_14915 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4 D GD604_01795 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D GD604_15520 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein D GD604_03045 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D GD604_03040 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D GD604_14090 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D GD604_02865 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GD604_09945 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GD604_03325 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GD604_05245 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GD604_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:dsx01504] D GD604_03005 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D GD604_01245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_02225 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_08260 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GD604_01240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_02230 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GD604_17100 TolC family protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dsx00537] D GD604_18065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dsx03100] D GD604_09730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_02570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_10245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_06375 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GD604_09520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_06725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_10590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_06765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_13425 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GD604_15065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GD604_07395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GD604_07330 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D GD604_10605 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GD604_00615 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GD604_00620 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GD604_06410 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GD604_12320 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GD604_07335 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GD604_07555 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GD604_08515 tRNA-His K14226 tRNA-His; tRNA His D GD604_02565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GD604_10250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GD604_14585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_11655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_08330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_01885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_09855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GD604_03955 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GD604_06415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GD604_06060 tRNA-Met K14230 tRNA-Met; tRNA Met D GD604_09180 tRNA-Met K14230 tRNA-Met; tRNA Met D GD604_10410 tRNA-Ile K14230 tRNA-Met; tRNA Met D GD604_16705 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D GD604_08245 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GD604_11955 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GD604_09760 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GD604_02450 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_08240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_09085 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_09010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GD604_07545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GD604_07040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GD604_07560 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GD604_07575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D GD604_07550 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D GD604_02265 tRNA-Val K14237 tRNA-Val; tRNA Val D GD604_07390 tRNA-Val K14237 tRNA-Val; tRNA Val D GD604_06505 tRNA-Val K14237 tRNA-Val; tRNA Val D GD604_12560 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D GD604_10255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D GD604_02575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D GD604_10425 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D GD604_18130 alcohol dehydrogenase catalytic domain-containing protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D GD604_05845 2Fe-2S iron-sulfur cluster binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D GD604_05215 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D GD604_05210 indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D GD604_04725 molybdopterin-dependent oxidoreductase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7] D GD604_17985 4Fe-4S ferredoxin K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D GD604_03295 ferredoxin:thioredoxin reductase K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2] D GD604_03010 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D GD604_07125 redoxin domain-containing protein K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D GD604_09190 osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D GD604_03825 hydrogenase 2 large subunit K00437 hydB; [NiFe] hydrogenase large subunit [EC:1.12.2.1] D GD604_03830 hydrogenase small subunit K18008 hydA; [NiFe] hydrogenase small subunit [EC:1.12.2.1] D GD604_04690 4Fe-4S dicluster domain-containing protein K00533 E1.12.7.2L; ferredoxin hydrogenase large subunit [EC:1.12.7.2] D GD604_04685 twin-arginine translocation signal domain-containing protein K00534 E1.12.7.2S; ferredoxin hydrogenase small subunit [EC:1.12.7.2] D GD604_12830 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D GD604_12825 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D GD604_17010 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D GD604_10920 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D GD604_10935 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D GD604_10655 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D GD604_04750 radical SAM protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D GD604_10175 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D GD604_16565 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D GD604_11275 cytochrome C K23300 qrcA; menaquinone reductase, multiheme cytochrome c subunit [EC:1.97.-.-] D GD604_16185 hypothetical protein K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D GD604_16195 hydrogenase-4 component E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D GD604_16200 NADH dehydrogenase FAD-containing subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D GD604_09415 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D GD604_15885 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D GD604_17465 hypothetical protein K05303 K05303; O-methyltransferase [EC:2.1.1.-] D GD604_16465 hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D GD604_06475 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D GD604_02235 GNAT family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D GD604_05635 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D GD604_08235 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D GD604_05110 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D GD604_10555 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D GD604_05645 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D GD604_12300 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D GD604_17235 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D GD604_13170 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D GD604_15150 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D GD604_00650 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D GD604_04835 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D GD604_10085 YbgC/FadM family acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D GD604_13580 hypothetical protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D GD604_13885 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D GD604_15495 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D GD604_07305 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D GD604_16340 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D GD604_17775 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D GD604_04280 DUF3391 domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D GD604_15965 MBL fold metallo-hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D GD604_06580 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D GD604_10195 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D GD604_00410 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D GD604_06290 polysaccharide deacetylase family protein K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-] D GD604_12185 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D GD604_06925 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D GD604_00485 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D GD604_11100 sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D GD604_04945 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D GD604_10560 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D GD604_10550 DUF111 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D GD604_02540 3-hydroxyacyl-ACP dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D GD604_02010 HAD-IC family P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D GD604_13865 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D GD604_18115 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D GD604_13480 HAD-IC family P-type ATPase K12953 ctpF; cation-transporting P-type ATPase F [EC:7.2.2.-] C 99981 Carbohydrate metabolism D GD604_00565 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D GD604_17440 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D GD604_18135 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D GD604_06840 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D GD604_04990 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D GD604_04995 4Fe-4S dicluster domain-containing protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D GD604_14460 lactate utilization protein K00782 lldG; L-lactate dehydrogenase complex protein LldG D GD604_05000 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D GD604_08470 fatty-acid--CoA ligase K02379 fdhD; FdhD protein D GD604_15675 ferredoxin K05337 fer; ferredoxin D GD604_01525 ferredoxin K05337 fer; ferredoxin D GD604_06835 ferredoxin K05337 fer; ferredoxin D GD604_13700 iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins D GD604_09580 iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins D GD604_06555 nifU; Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein D GD604_13250 radical SAM protein K02585 nifB; nitrogen fixation protein NifB D GD604_13245 nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN D GD604_13240 nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D GD604_03195 FAD-dependent oxidoreductase K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA D GD604_03200 hydrogenase iron-sulfur subunit K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB D GD604_03205 heterodisulfide reductase subunit E K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC D GD604_00955 flavodoxin K03839 fldA; flavodoxin I D GD604_01330 NADH-quinone oxidoreductase subunit L K14086 echA; ech hydrogenase subunit A D GD604_01325 NADH-quinone oxidoreductase subunit H K14087 echB; ech hydrogenase subunit B D GD604_01320 NADH-quinone oxidoreductase subunit B K14088 echC; ech hydrogenase subunit C D GD604_01315 hypothetical protein K14089 echD; ech hydrogenase subunit D D GD604_01310 NADH-quinone oxidoreductase subunit D K14090 echE; ech hydrogenase subunit E D GD604_01305 4Fe-4S ferredoxin K14091 echF; ech hydrogenase subunit F D GD604_16240 DUF4040 domain-containing protein K14113 ehbD; energy-converting hydrogenase B subunit D D GD604_17990 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D GD604_07350 tusE; TusE/DsrC/DsvC family sulfur relay protein K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D GD604_11760 VOC family protein K08234 yaeR; glyoxylase I family protein D GD604_11770 VOC family protein K08234 yaeR; glyoxylase I family protein D GD604_00345 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D GD604_07890 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A D GD604_11665 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D GD604_05555 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D GD604_01980 hypothetical protein K15977 K15977; putative oxidoreductase D GD604_07695 DoxX family membrane protein K15977 K15977; putative oxidoreductase D GD604_16400 GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D GD604_10980 cold-shock protein K03704 cspA; cold shock protein D GD604_17475 cold-shock protein K03704 cspA; cold shock protein D GD604_06525 cold-shock protein K03704 cspA; cold shock protein D GD604_13190 P-II family nitrogen regulator K02589 nifHD1; nitrogen regulatory protein PII 1 D GD604_13195 P-II family nitrogen regulator K02590 nifHD2; nitrogen regulatory protein PII 2 D GD604_16580 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D GD604_03885 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D GD604_07925 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D GD604_08225 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D GD604_07775 tig; trigger factor K03545 tig; trigger factor D GD604_04780 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D GD604_04855 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D GD604_08465 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D GD604_17325 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D GD604_12115 hypC; HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D GD604_12505 hypC; HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D GD604_12110 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D GD604_12510 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D GD604_12105 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D GD604_06955 hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D GD604_03290 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH D GD604_15395 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D GD604_04760 XdhC/CoxI family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D GD604_15255 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D GD604_06055 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D GD604_11330 endonuclease III domain-containing protein K07457 K07457; endonuclease III related protein D GD604_14065 YraN family protein K07460 yraN; putative endonuclease D GD604_01910 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D GD604_16950 terminase small subunit K07474 xtmA; phage terminase small subunit D GD604_09970 AAA family ATPase K07478 ycaJ; putative ATPase D GD604_14920 DNA primase K06919 K06919; putative DNA primase/helicase D GD604_16720 DUF3987 domain-containing protein K06919 K06919; putative DNA primase/helicase D GD604_05975 DUF3987 domain-containing protein K06919 K06919; putative DNA primase/helicase D GD604_11525 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_11620 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_11755 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_13845 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_13855 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_15280 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_04340 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_05925 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_06400 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_07460 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_07505 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_10700 IS5 family transposase K07481 K07481; transposase, IS5 family D GD604_02245 ISL3 family transposase K07485 K07485; transposase D GD604_03785 ISL3 family transposase K07485 K07485; transposase D GD604_05940 ISL3 family transposase K07485 K07485; transposase D GD604_02510 transposase K07488 K07488; transposase D GD604_04875 hypothetical protein K07488 K07488; transposase D GD604_07645 DDE transposase K07488 K07488; transposase D GD604_11625 IS5 family transposase K07492 K07492; putative transposase D GD604_14735 IS5 family transposase K07492 K07492; putative transposase D GD604_14925 IS5 family transposase K07492 K07492; putative transposase D GD604_05135 IS5 family transposase K07492 K07492; putative transposase D GD604_10530 IS5 family transposase K07492 K07492; putative transposase D GD604_09770 IS3 family transposase K07497 K07497; putative transposase D GD604_09785 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D GD604_14265 phage shock protein A K03969 pspA; phage shock protein A D GD604_11685 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D GD604_09650 acriflavine resistance protein B K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D GD604_10010 acriflavine resistance protein B K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D GD604_05865 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D GD604_04440 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D GD604_12720 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D GD604_10820 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D GD604_12390 transporter K07085 K07085; putative transport protein C 99978 Cell growth D GD604_09000 carbon monoxide dehydrogenase K07321 cooC; CO dehydrogenase maturation factor D GD604_11725 glycosyltransferase K06320 cgeB; spore maturation protein CgeB D GD604_18045 glycosyltransferase K06320 cgeB; spore maturation protein CgeB D GD604_09280 glycosyltransferase K06320 cgeB; spore maturation protein CgeB D GD604_06090 KH domain-containing protein K06346 jag; spoIIIJ-associated protein D GD604_14960 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D GD604_13340 hypothetical protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D GD604_11335 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D GD604_11820 carbon starvation protein A K06200 cstA; carbon starvation protein D GD604_05755 typA; translational GTPase TypA K06207 typA; GTP-binding protein D GD604_17825 CBS domain-containing protein K07168 K07168; CBS domain-containing membrane protein D GD604_09420 CBS domain-containing protein K07168 K07168; CBS domain-containing membrane protein D GD604_07310 AAA family ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D GD604_17035 AAA family ATPase K07175 phoH2; PhoH-like ATPase D GD604_13720 CBS domain-containing protein K07182 K07182; CBS domain-containing protein D GD604_08580 CBS domain-containing protein K07182 K07182; CBS domain-containing protein D GD604_08595 CBS domain-containing protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D GD604_09145 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D GD604_11255 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D GD604_15090 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D GD604_05170 hypothetical protein K06142 hlpA; outer membrane protein D GD604_16800 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D GD604_16785 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D GD604_03015 hypothetical protein K07286 yajG; uncharacterized lipoprotein D GD604_12180 AsmA family protein K07289 asmA; AsmA protein D GD604_15500 NfeD family protein K07340 ybbJ; inner membrane protein D GD604_04585 HlyD family type I secretion periplasmic adaptor subunit K02022 ABC.MR.TX; HlyD family secretion protein D GD604_04815 NHLP bacteriocin system secretion protein K02022 ABC.MR.TX; HlyD family secretion protein D GD604_11215 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D GD604_15530 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D GD604_17265 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D GD604_07405 biotin/lipoyl-binding protein K02005 ABC.CD.TX; HlyD family secretion protein D GD604_05255 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D GD604_07970 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D GD604_13590 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D GD604_17885 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D GD604_03035 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D GD604_11325 divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D GD604_11480 bacteriohemerythrin K07216 hr; hemerythrin D GD604_14495 bacteriohemerythrin K07216 hr; hemerythrin D GD604_15685 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] B B 09194 Poorly characterized C 99996 General function prediction only D GD604_03270 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D GD604_00535 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D GD604_11375 tRNA-binding protein K06878 K06878; tRNA-binding protein D GD604_06680 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D GD604_07845 SufD family Fe-S cluster assembly protein K09014 sufB; Fe-S cluster assembly protein SufB D GD604_07240 hypothetical protein K07038 K07038; inner membrane protein D GD604_10125 hypothetical protein K07038 K07038; inner membrane protein D GD604_13860 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D GD604_10745 YihY family inner membrane protein K07058 K07058; membrane protein D GD604_11400 LemA family protein K03744 lemA; LemA protein D GD604_02135 hypothetical protein K03975 dedA; membrane-associated protein D GD604_07005 DedA family protein K03975 dedA; membrane-associated protein D GD604_11840 DUF202 domain-containing protein K00389 yidH; putative membrane protein C 99997 Function unknown D GD604_11405 methanol dehydrogenase K06872 K06872; uncharacterized protein D GD604_14450 AAA family ATPase K06873 K06873; uncharacterized protein D GD604_06800 AAA family ATPase K06873 K06873; uncharacterized protein D GD604_15815 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D GD604_01515 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein D GD604_07865 CoA-binding protein K06929 K06929; uncharacterized protein D GD604_10640 DUF296 domain-containing protein K06934 K06934; uncharacterized protein D GD604_07860 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D GD604_08375 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D GD604_16595 HDIG domain-containing protein K06951 K06951; uncharacterized protein D GD604_13650 KH domain-containing protein K06960 K06960; uncharacterized protein D GD604_09430 VOC family protein K06996 K06996; uncharacterized protein D GD604_05920 MMPL family transporter K07003 K07003; uncharacterized protein D GD604_17290 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D GD604_12165 4-vinyl reductase K07013 K07013; uncharacterized protein D GD604_10080 amidohydrolase family protein K07045 K07045; uncharacterized protein D GD604_12675 TIGR01777 family protein K07071 K07071; uncharacterized protein D GD604_18095 permease K07089 K07089; uncharacterized protein D GD604_04140 permease K07089 K07089; uncharacterized protein D GD604_15760 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_15905 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_01620 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_03615 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_05705 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_07770 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_09625 TSUP family transporter K07090 K07090; uncharacterized protein D GD604_00975 multidrug transporter K07092 K07092; uncharacterized protein D GD604_15355 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein D GD604_12660 serine/threonine protein phosphatase K07096 K07096; uncharacterized protein D GD604_11085 YedE-related selenium metabolism membrane protein K07112 K07112; uncharacterized protein D GD604_12190 sel1 repeat family protein K07126 K07126; uncharacterized protein D GD604_16325 hypothetical protein K07126 K07126; uncharacterized protein D GD604_08050 hypothetical protein K07126 K07126; uncharacterized protein D GD604_03740 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D GD604_14700 DUF362 domain-containing protein K07138 K07138; uncharacterized protein D GD604_02860 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D GD604_07835 DUF554 family protein K07150 K07150; uncharacterized protein D GD604_10420 hypothetical protein K07164 K07164; uncharacterized protein D GD604_06080 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D GD604_11390 bifunctional nuclease family protein K08999 K08999; uncharacterized protein D GD604_09485 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D GD604_08025 DUF167 domain-containing protein K09131 K09131; uncharacterized protein D GD604_03845 DUF401 family protein K09133 K09133; uncharacterized protein D GD604_00840 hypothetical protein K09138 K09138; uncharacterized protein D GD604_06300 Fis family transcriptional regulator K09138 K09138; uncharacterized protein D GD604_10070 amrA; AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein D GD604_00400 DUF116 domain-containing protein K09729 K09729; uncharacterized protein D GD604_07370 UPF0280 family protein K09740 K09740; uncharacterized protein D GD604_17975 DUF342 domain-containing protein K09749 K09749; uncharacterized protein D GD604_12345 DUF503 family protein K09764 K09764; uncharacterized protein D GD604_09075 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D GD604_15485 Trm112 family protein K09791 K09791; uncharacterized protein D GD604_08435 DUF456 family protein K09793 K09793; uncharacterized protein D GD604_08030 DUF465 domain-containing protein K09794 K09794; uncharacterized protein D GD604_14300 DUF459 domain-containing protein K09795 K09795; uncharacterized protein D GD604_10805 DUF459 domain-containing protein K09795 K09795; uncharacterized protein D GD604_10810 DUF459 domain-containing protein K09795 K09795; uncharacterized protein D GD604_10815 DUF459 domain-containing protein K09795 K09795; uncharacterized protein D GD604_11345 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D GD604_14200 BrnT family toxin K09803 K09803; uncharacterized protein D GD604_00525 BrnT family toxin K09803 K09803; uncharacterized protein D GD604_10360 hypothetical protein K09857 K09857; uncharacterized protein D GD604_15740 hypothetical protein K09902 K09902; uncharacterized protein D GD604_01705 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D GD604_14560 DUF2065 family protein K09937 K09937; uncharacterized protein D GD604_03410 DUF2239 family protein K09965 K09965; uncharacterized protein D GD604_01970 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein D GD604_14290 exonuclease K07502 yprB; uncharacterized protein D GD604_04445 DUF47 family protein K07220 K07220; uncharacterized protein D GD604_12335 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 25, 2024