+D GENES KO #

  KEGG Orthology (KO) - Deefgea tanakiae

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dtk00010] D K4H28_11185 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D K4H28_07655 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D K4H28_03705 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D K4H28_04225 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D K4H28_11155 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D K4H28_03880 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D K4H28_10755 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D K4H28_06270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D K4H28_03835 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_01320 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_08030 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D K4H28_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D K4H28_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D K4H28_03105 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_15465 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D K4H28_14885 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:dtk00020] D K4H28_05655 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D K4H28_06580 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D K4H28_11485 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D K4H28_05660 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D K4H28_05665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_05680 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D K4H28_05675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D K4H28_05640 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D K4H28_05645 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D K4H28_05630 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D K4H28_05635 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D K4H28_06225 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D K4H28_01840 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D K4H28_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D K4H28_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:dtk00030] D K4H28_11185 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D K4H28_11170 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D K4H28_11175 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D K4H28_13640 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D K4H28_06785 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D K4H28_09610 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D K4H28_11790 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D K4H28_12560 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D K4H28_15400 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D K4H28_02015 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_15870 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D K4H28_11165 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D K4H28_11160 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D K4H28_00855 gntK; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D K4H28_03705 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D K4H28_07655 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:dtk00040] D K4H28_02095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D K4H28_07405 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D K4H28_06785 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:dtk00051] D K4H28_14015 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D K4H28_02100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D K4H28_02105 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D K4H28_05970 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D K4H28_07655 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D K4H28_03705 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D K4H28_04225 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D K4H28_13885 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:dtk00052] D K4H28_11660 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D K4H28_07405 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_07655 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D K4H28_10210 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism D K4H28_02095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:dtk00500] D K4H28_10210 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D K4H28_07405 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D K4H28_07400 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D K4H28_10190 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D K4H28_10185 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D K4H28_10205 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D K4H28_10180 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D K4H28_10200 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D K4H28_15280 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D K4H28_06020 glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_11185 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D K4H28_14015 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dtk00520] D K4H28_00935 chitinase C-terminal domain-containing protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D K4H28_01565 chitinase C-terminal domain-containing protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D K4H28_13305 chitinase C-terminal domain-containing protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D K4H28_05140 glycoside hydrolase family 18 protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D K4H28_01555 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D K4H28_01510 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D K4H28_06450 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D K4H28_08170 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D K4H28_10155 ATPase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D K4H28_14015 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D K4H28_04930 isomerizing glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D K4H28_09775 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D K4H28_04195 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D K4H28_15540 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D K4H28_06470 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D K4H28_04635 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D K4H28_09625 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D K4H28_09620 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D K4H28_12920 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D K4H28_09740 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D K4H28_02545 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D K4H28_14885 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D K4H28_15465 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_07405 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D K4H28_02095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D K4H28_11660 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D K4H28_13885 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D K4H28_11185 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D K4H28_02105 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D K4H28_05970 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D K4H28_02100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D K4H28_07400 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D K4H28_07395 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D K4H28_10035 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D K4H28_10190 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:dtk00620] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D K4H28_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D K4H28_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_08845 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D K4H28_03105 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D K4H28_14370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D K4H28_14365 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_15310 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_03835 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_01320 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_07790 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D K4H28_10070 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D K4H28_10075 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D K4H28_07260 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D K4H28_00440 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D K4H28_15385 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D K4H28_00880 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D K4H28_03785 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D K4H28_01840 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D K4H28_06225 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D K4H28_09750 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D K4H28_08030 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D K4H28_11885 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_11065 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dtk00630] D K4H28_11880 aceA; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D K4H28_11885 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D K4H28_05655 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D K4H28_06580 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_06250 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D K4H28_09330 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D K4H28_08745 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D K4H28_06795 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D K4H28_02215 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D K4H28_14220 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D K4H28_15075 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D K4H28_02860 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_00090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_06730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D K4H28_05785 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D K4H28_05775 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_05780 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D K4H28_11160 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D K4H28_07965 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:dtk00640] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D K4H28_14370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D K4H28_14365 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_15310 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_08845 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D K4H28_07790 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D K4H28_10070 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D K4H28_10075 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_05675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D K4H28_05680 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D K4H28_06580 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D K4H28_02930 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D K4H28_04075 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:dtk00650] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_05485 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D K4H28_09330 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D K4H28_07470 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D K4H28_09615 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D K4H28_06250 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D K4H28_05640 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D K4H28_05645 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D K4H28_05630 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D K4H28_05635 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_03710 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D K4H28_08845 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D K4H28_15805 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D K4H28_11035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D K4H28_11040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:dtk00660] D K4H28_11035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D K4H28_11040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D K4H28_05675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D K4H28_05680 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D K4H28_08185 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D K4H28_08175 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D K4H28_08165 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dtk00562] D K4H28_15405 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D K4H28_08120 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D K4H28_04225 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dtk00190] D K4H28_04235 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D K4H28_04240 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D K4H28_04245 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D K4H28_04250 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D K4H28_04255 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D K4H28_04260 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D K4H28_04265 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D K4H28_04270 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D K4H28_04275 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D K4H28_04280 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D K4H28_04285 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D K4H28_04290 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D K4H28_04295 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D K4H28_04300 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D K4H28_03895 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D K4H28_05640 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D K4H28_05645 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D K4H28_05630 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D K4H28_05635 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D K4H28_02640 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D K4H28_02635 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D K4H28_02630 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D K4H28_13755 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D K4H28_13780 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D K4H28_13795 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D K4H28_13800 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D K4H28_13760 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D K4H28_06965 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D K4H28_06970 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D K4H28_06975 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D K4H28_06980 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D K4H28_04750 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D K4H28_04745 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D K4H28_06925 c-type cytochrome K08738 CYC; cytochrome c D K4H28_14705 c-type cytochrome K08738 CYC; cytochrome c D K4H28_15515 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D K4H28_15525 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D K4H28_15520 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D K4H28_15510 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D K4H28_15530 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D K4H28_15495 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D K4H28_15505 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D K4H28_15500 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D K4H28_09875 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D K4H28_15560 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:dtk00710] D K4H28_03880 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D K4H28_11155 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D K4H28_03705 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D K4H28_09610 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D K4H28_12560 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D K4H28_04225 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D K4H28_06785 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D K4H28_11790 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D K4H28_09750 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D K4H28_03785 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:dtk00720] D K4H28_08030 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D K4H28_09750 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D K4H28_01840 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D K4H28_06225 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D K4H28_05640 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D K4H28_05645 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D K4H28_05630 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D K4H28_05635 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D K4H28_05680 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D K4H28_05675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_11485 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D K4H28_06580 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D K4H28_07790 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D K4H28_10070 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D K4H28_10075 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D K4H28_12115 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D K4H28_10880 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D K4H28_14365 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_15310 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_14370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:dtk00680] D K4H28_06730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D K4H28_15075 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D K4H28_08745 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D K4H28_06270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D K4H28_09750 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D K4H28_03705 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D K4H28_07655 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D K4H28_14370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D K4H28_14365 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_15310 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D K4H28_08030 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D K4H28_10755 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D K4H28_09160 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D K4H28_07020 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:dtk00910] D K4H28_13335 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D K4H28_13340 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D K4H28_04480 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D K4H28_04470 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D K4H28_03045 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D K4H28_06355 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D K4H28_02860 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_00090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_12585 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D K4H28_12600 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D K4H28_12580 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D K4H28_12595 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D K4H28_07915 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D K4H28_07100 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dtk00920] D K4H28_08495 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D K4H28_08490 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D K4H28_08500 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D K4H28_08505 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D K4H28_08510 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D K4H28_00190 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D K4H28_00180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D K4H28_10160 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D K4H28_10590 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D K4H28_00205 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D K4H28_05920 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D K4H28_10220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D K4H28_10905 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D K4H28_07720 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D K4H28_16450 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D K4H28_05130 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dtk00061] D K4H28_07790 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D K4H28_10070 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D K4H28_10075 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D K4H28_00995 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D K4H28_00985 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D K4H28_00980 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D K4H28_01000 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D K4H28_03235 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_00990 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_07145 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D K4H28_15220 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_00665 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_04990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dtk00071] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_05490 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D K4H28_05485 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D K4H28_05475 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D K4H28_04990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D K4H28_08660 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D K4H28_03105 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis D K4H28_00995 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D K4H28_00985 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dtk00561] D K4H28_00975 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D K4H28_03300 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D K4H28_00480 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D K4H28_14380 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D K4H28_04115 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:dtk00564] D K4H28_01135 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D K4H28_03300 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D K4H28_00480 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D K4H28_14380 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D K4H28_07175 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D K4H28_07730 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D K4H28_11060 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D K4H28_11055 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D K4H28_06675 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D K4H28_06685 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D K4H28_06195 clsB; cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D K4H28_14300 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:dtk00600] D K4H28_01510 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:dtk00592] D K4H28_05490 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:dtk01040] D K4H28_11530 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D K4H28_01875 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dtk00230] D K4H28_10175 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_15870 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D K4H28_05125 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D K4H28_12670 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D K4H28_02600 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D K4H28_07985 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D K4H28_10540 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D K4H28_02595 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D K4H28_16525 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D K4H28_16535 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D K4H28_16510 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D K4H28_09580 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D K4H28_12680 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D K4H28_06745 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D K4H28_14420 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D K4H28_06570 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D K4H28_02945 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D K4H28_03205 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D K4H28_11235 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D K4H28_06740 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D K4H28_08695 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D K4H28_08650 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D K4H28_08985 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D K4H28_03430 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D K4H28_10445 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D K4H28_04670 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D K4H28_04690 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D K4H28_10935 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D K4H28_00505 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D K4H28_10435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D K4H28_12550 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D K4H28_10685 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D K4H28_14680 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D K4H28_08575 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D K4H28_13560 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D K4H28_04675 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D K4H28_07665 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D K4H28_12285 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D K4H28_00190 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D K4H28_00180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:dtk00240] D K4H28_04160 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D K4H28_04155 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D K4H28_03765 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D K4H28_03770 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D K4H28_13615 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D K4H28_05370 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D K4H28_12110 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D K4H28_15455 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D K4H28_06625 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D K4H28_07190 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D K4H28_08650 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D K4H28_16105 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D K4H28_07055 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D K4H28_06260 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D K4H28_06650 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D K4H28_14420 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D K4H28_06570 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D K4H28_02945 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D K4H28_03205 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D K4H28_09430 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D K4H28_10935 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D K4H28_08135 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D K4H28_04670 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D K4H28_04690 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D K4H28_12010 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D K4H28_05435 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D K4H28_07825 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D K4H28_03610 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-] D K4H28_00645 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dtk00250] D K4H28_05265 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D K4H28_02180 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D K4H28_15075 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D K4H28_00100 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D K4H28_03215 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D K4H28_15780 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D K4H28_08575 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D K4H28_09580 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D K4H28_03765 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_03710 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D K4H28_12585 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D K4H28_12600 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D K4H28_12580 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D K4H28_12595 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D K4H28_06355 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D K4H28_07995 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D K4H28_02860 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_00090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_04160 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D K4H28_04155 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D K4H28_04930 isomerizing glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D K4H28_09775 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D K4H28_05125 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dtk00260] D K4H28_02285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D K4H28_02750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D K4H28_02175 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D K4H28_16170 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D K4H28_02165 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D K4H28_09055 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D K4H28_06730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D K4H28_15075 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D K4H28_08745 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D K4H28_10755 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D K4H28_09160 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D K4H28_07020 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D K4H28_05785 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D K4H28_05775 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_05780 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D K4H28_07730 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D K4H28_11060 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D K4H28_06765 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D K4H28_10915 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D K4H28_09830 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D K4H28_05100 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D K4H28_05095 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dtk00270] D K4H28_05920 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D K4H28_10220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D K4H28_10905 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D K4H28_07720 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D K4H28_08515 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D K4H28_08520 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D K4H28_15205 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D K4H28_03605 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D K4H28_10340 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D K4H28_16270 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D K4H28_06185 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D K4H28_06140 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_07560 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_00305 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_14790 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D K4H28_11235 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D K4H28_11860 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D K4H28_16280 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D K4H28_02285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D K4H28_02750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D K4H28_02175 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D K4H28_16450 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D K4H28_10025 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D K4H28_05130 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D K4H28_02350 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D K4H28_13905 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D K4H28_13895 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D K4H28_00205 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D K4H28_09830 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D K4H28_05620 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D K4H28_06765 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D K4H28_05705 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D K4H28_09160 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:dtk00280] D K4H28_02350 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_05490 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_09345 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dtk00290] D K4H28_10915 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D K4H28_08185 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D K4H28_08175 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D K4H28_08165 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D K4H28_11035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D K4H28_11040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D K4H28_11045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D K4H28_12525 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D K4H28_02350 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D K4H28_02180 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D K4H28_11065 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dtk00300] D K4H28_02175 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D K4H28_02285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D K4H28_02750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D K4H28_03040 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D K4H28_06445 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D K4H28_07895 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D K4H28_06550 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D K4H28_06545 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D K4H28_09025 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D K4H28_08760 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D K4H28_05380 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D K4H28_16355 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D K4H28_16360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:dtk00310] D K4H28_05665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_09830 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_03710 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D K4H28_09110 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:dtk00220] D K4H28_03225 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D K4H28_03215 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D K4H28_15780 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D K4H28_13095 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D K4H28_02860 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_00090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_04160 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D K4H28_04155 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D K4H28_06355 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D K4H28_02180 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D K4H28_12790 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D K4H28_06850 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D K4H28_00345 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D K4H28_00620 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] C 00330 Arginine and proline metabolism [PATH:dtk00330] D K4H28_08820 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D K4H28_06140 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_07560 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_00305 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_06185 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D K4H28_08260 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D K4H28_08250 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D K4H28_08025 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D K4H28_08255 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D K4H28_08245 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D K4H28_00080 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D K4H28_00105 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D K4H28_10715 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D K4H28_07995 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D K4H28_14185 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D K4H28_00155 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D K4H28_09110 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:dtk00340] D K4H28_12930 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D K4H28_08580 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D K4H28_13040 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D K4H28_13025 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D K4H28_13010 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D K4H28_13005 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D K4H28_13020 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D K4H28_13000 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D K4H28_01395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09135 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09290 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D K4H28_12945 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:dtk00350] D K4H28_01395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09135 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_11860 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D K4H28_03105 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D K4H28_03710 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:dtk00360] D K4H28_01395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09135 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_11860 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D K4H28_09460 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D K4H28_07830 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D K4H28_09110 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D K4H28_12700 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:dtk00380] D K4H28_05665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_12700 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dtk00400] D K4H28_15105 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D K4H28_14690 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D K4H28_06665 N-acetylneuraminate synthase family protein K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D K4H28_11085 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D K4H28_10065 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D K4H28_02870 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D K4H28_11090 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D K4H28_02335 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D K4H28_01345 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D K4H28_06800 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D K4H28_06805 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D K4H28_06810 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D K4H28_05090 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D K4H28_06820 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D K4H28_05100 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D K4H28_05095 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D K4H28_00160 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D K4H28_09150 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D K4H28_06660 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D K4H28_01395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09135 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_11860 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dtk00410] D K4H28_12635 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_09915 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:dtk00430] D K4H28_00100 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D K4H28_06355 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D K4H28_14365 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_15310 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D K4H28_14370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D K4H28_11990 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:dtk00450] D K4H28_08515 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D K4H28_08520 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D K4H28_15205 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D K4H28_03605 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D K4H28_10340 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D K4H28_06125 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D K4H28_07225 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D K4H28_00190 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D K4H28_00180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D K4H28_07255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D K4H28_06730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dtk00470] D K4H28_02280 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D K4H28_09110 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D K4H28_16390 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D K4H28_09830 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D K4H28_07550 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D K4H28_16370 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D K4H28_09025 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D K4H28_08760 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D K4H28_07830 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:dtk00480] D K4H28_07595 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D K4H28_07605 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D K4H28_07600 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D K4H28_13905 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D K4H28_13895 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D K4H28_11675 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D K4H28_10595 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D K4H28_11925 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D K4H28_11890 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D K4H28_12695 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D K4H28_11485 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D K4H28_13640 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D K4H28_11170 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D K4H28_04150 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D K4H28_07910 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D K4H28_06140 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_07560 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D K4H28_00305 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:dtk00511] D K4H28_01510 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:dtk00540] D K4H28_07140 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D K4H28_16410 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D K4H28_07150 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D K4H28_00565 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D K4H28_07135 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D K4H28_07685 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D K4H28_02665 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D K4H28_06265 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D K4H28_02670 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D K4H28_07675 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D K4H28_15980 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D K4H28_16260 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D K4H28_16265 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D K4H28_13270 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D K4H28_12675 pagP; lipid IV(A) palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D K4H28_01865 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D K4H28_06620 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D K4H28_00475 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D K4H28_11540 adenylyltransferase/cytidyltransferase family protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D K4H28_07075 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D K4H28_15975 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D K4H28_00500 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D K4H28_02340 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dtk00541] D K4H28_07405 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D K4H28_11660 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D K4H28_02095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D K4H28_02505 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D K4H28_02495 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D K4H28_07390 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D K4H28_02510 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D K4H28_02500 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D K4H28_07400 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D K4H28_07395 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D K4H28_10035 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D K4H28_02100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D K4H28_02105 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D K4H28_15540 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D K4H28_02545 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D K4H28_02550 NAD-dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D K4H28_02555 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D K4H28_02580 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00550 Peptidoglycan biosynthesis [PATH:dtk00550] D K4H28_12920 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D K4H28_09740 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D K4H28_16385 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D K4H28_16370 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D K4H28_16355 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D K4H28_16390 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D K4H28_16360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D K4H28_07180 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D K4H28_16230 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D K4H28_16365 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D K4H28_16380 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D K4H28_02875 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D K4H28_11120 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D K4H28_00125 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D K4H28_12770 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D K4H28_16350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D K4H28_09945 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D K4H28_02830 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D K4H28_14635 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:dtk00552] D K4H28_16230 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D K4H28_02580 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dtk00543] D K4H28_05920 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D K4H28_10220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D K4H28_02075 glycosyltransferase family 4 protein K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dtk00730] D K4H28_02430 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D K4H28_05395 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D K4H28_14655 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D K4H28_10230 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D K4H28_04950 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D K4H28_10420 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D K4H28_05385 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D K4H28_05390 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D K4H28_06690 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D K4H28_10660 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D K4H28_07665 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dtk00740] D K4H28_06705 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D K4H28_06720 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D K4H28_06700 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D K4H28_06710 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D K4H28_06595 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D K4H28_05385 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D K4H28_10175 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D K4H28_02725 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:dtk00750] D K4H28_09160 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D K4H28_09640 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D K4H28_08755 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D K4H28_02165 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:dtk00760] D K4H28_05265 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D K4H28_01680 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D K4H28_14900 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D K4H28_14420 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D K4H28_06570 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D K4H28_02945 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D K4H28_00165 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D K4H28_14145 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D K4H28_11825 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D K4H28_10640 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D K4H28_05760 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D K4H28_03985 proton-translocating transhydrogenase family protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D K4H28_03990 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D K4H28_03980 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D K4H28_03710 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:dtk00770] D K4H28_11035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D K4H28_11040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D K4H28_11045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D K4H28_12525 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D K4H28_09920 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D K4H28_09915 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D K4H28_05430 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D K4H28_00705 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D K4H28_12270 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D K4H28_02350 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D K4H28_12635 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:dtk00780] D K4H28_06395 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D K4H28_01000 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D K4H28_03235 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_00990 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_07145 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D K4H28_15220 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_00665 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_03070 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D K4H28_03050 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D K4H28_09045 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D K4H28_06390 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D K4H28_05515 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] C 00785 Lipoic acid metabolism [PATH:dtk00785] D K4H28_09100 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D K4H28_09095 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D K4H28_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D K4H28_05660 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D K4H28_05665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D K4H28_05785 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D K4H28_05775 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D K4H28_05780 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dtk00790] D K4H28_11245 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D K4H28_07545 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D K4H28_06130 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D K4H28_03305 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D K4H28_09925 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D K4H28_04190 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D K4H28_09880 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D K4H28_05110 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D K4H28_06705 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D K4H28_01015 aminodeoxychorismate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D K4H28_01020 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D K4H28_00925 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D K4H28_10655 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D K4H28_14775 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D K4H28_14785 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D K4H28_06535 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D K4H28_13205 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D K4H28_13175 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D K4H28_13180 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D K4H28_05340 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D K4H28_13190 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:dtk00670] D K4H28_09880 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D K4H28_12115 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D K4H28_06730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D K4H28_02600 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D K4H28_12680 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D K4H28_09685 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D K4H28_05775 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D K4H28_15205 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D K4H28_07825 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D K4H28_07965 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D K4H28_10880 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dtk00860] D K4H28_01040 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K4H28_12655 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D K4H28_14345 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D K4H28_16025 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D K4H28_15585 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D K4H28_09400 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D K4H28_12625 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D K4H28_05255 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D K4H28_14670 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D K4H28_08290 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D K4H28_06930 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D K4H28_13755 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D K4H28_13760 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D K4H28_04785 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D K4H28_04780 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D K4H28_04815 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D K4H28_04765 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D K4H28_01750 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D K4H28_04770 cobD; threonine-phosphate decarboxylase CobD K02225 cobC1; cobalamin biosynthesis protein CobC D K4H28_01385 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D K4H28_15965 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D K4H28_09295 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D K4H28_09300 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dtk00130] D K4H28_03420 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D K4H28_03415 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D K4H28_09320 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D K4H28_02725 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D K4H28_03080 UbiH/UbiF family hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D K4H28_04640 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D K4H28_10330 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D K4H28_11770 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D K4H28_00580 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D K4H28_04840 dhbC; isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] D K4H28_11075 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dtk00900] D K4H28_04950 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D K4H28_07170 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D K4H28_00920 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D K4H28_15860 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D K4H28_00545 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D K4H28_08630 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D K4H28_06610 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_02725 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D K4H28_04945 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D K4H28_11625 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D K4H28_07180 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D K4H28_10650 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:dtk00906] D K4H28_01355 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:dtk00907] D K4H28_05490 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D K4H28_09610 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:dtk00523] D K4H28_02505 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D K4H28_02495 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D K4H28_07390 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D K4H28_02510 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D K4H28_02500 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:dtk01053] D K4H28_04840 dhbC; isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] D K4H28_04850 isochorismatase family protein K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D K4H28_04890 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D K4H28_04845 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] C 01055 Biosynthesis of vancomycin group antibiotics D K4H28_02495 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D K4H28_08930 acetylxylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] C 00332 Carbapenem biosynthesis [PATH:dtk00332] D K4H28_14185 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D K4H28_00155 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dtk00261] D K4H28_00190 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D K4H28_00180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D K4H28_02285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D K4H28_02750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D K4H28_03040 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D K4H28_06445 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D K4H28_07895 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dtk00521] D K4H28_14895 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_10195 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D K4H28_15405 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D K4H28_08120 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D K4H28_02505 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D K4H28_02495 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D K4H28_07390 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D K4H28_02510 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D K4H28_02500 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:dtk00525] D K4H28_02505 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D K4H28_02495 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:dtk00401] D K4H28_06660 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D K4H28_01395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09135 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_11860 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D K4H28_06800 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D K4H28_06805 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D K4H28_00985 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D K4H28_03235 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_00990 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_15220 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_00665 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D K4H28_00995 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:dtk00999] D K4H28_16270 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D K4H28_02870 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:dtk00362] D K4H28_05490 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D K4H28_08720 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D K4H28_10255 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D K4H28_05485 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:dtk00627] D K4H28_07260 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D K4H28_02725 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:dtk00364] D K4H28_16505 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:dtk00625] D K4H28_03105 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:dtk00361] D K4H28_16505 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:dtk00623] D K4H28_16505 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation D K4H28_08720 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:dtk00633] D K4H28_06830 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D K4H28_07575 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D K4H28_05490 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D K4H28_08720 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:dtk00626] D K4H28_03105 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D K4H28_06510 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dtk03020] D K4H28_12460 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D K4H28_12455 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D K4H28_12300 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D K4H28_10440 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dtk03010] D K4H28_06645 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D K4H28_07200 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D K4H28_12395 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D K4H28_12305 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D K4H28_12340 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D K4H28_05060 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D K4H28_12445 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D K4H28_12355 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D K4H28_00615 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D K4H28_12430 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D K4H28_12310 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D K4H28_12450 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D K4H28_12315 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D K4H28_12360 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D K4H28_05020 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D K4H28_12240 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D K4H28_12380 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D K4H28_05050 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D K4H28_12405 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D K4H28_11845 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D K4H28_01765 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D K4H28_12475 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D K4H28_12410 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D K4H28_12425 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D K4H28_12420 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D K4H28_12365 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D K4H28_12350 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D K4H28_12465 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D K4H28_05045 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D K4H28_12470 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D K4H28_12480 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D K4H28_00610 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D K4H28_12375 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D K4H28_12330 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D K4H28_12390 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D K4H28_12295 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D K4H28_12345 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D K4H28_12225 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D K4H28_04330 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D K4H28_11620 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D K4H28_12400 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D K4H28_12415 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D K4H28_12370 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D K4H28_15875 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D K4H28_11615 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D K4H28_11350 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D K4H28_12385 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D K4H28_12335 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D K4H28_03180 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D K4H28_00970 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D K4H28_11355 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D K4H28_16625 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D K4H28_04325 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D K4H28_12320 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D K4H28_01175 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dtk00970] D K4H28_02295 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D K4H28_15015 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D K4H28_15865 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D K4H28_01160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D K4H28_15380 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D K4H28_01785 tRNA-Ile K14230 tRNA-Met; tRNA Met D K4H28_06220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D K4H28_01040 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K4H28_12745 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D K4H28_12735 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D K4H28_12750 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D K4H28_09415 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D K4H28_08425 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D K4H28_08705 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D K4H28_00455 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D K4H28_00465 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D K4H28_04315 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D K4H28_09195 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D K4H28_06200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D K4H28_07255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D K4H28_09685 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D K4H28_11695 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D K4H28_02460 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K4H28_06600 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D K4H28_06310 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D K4H28_01115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D K4H28_05575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D K4H28_08625 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D K4H28_04335 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D K4H28_04340 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D K4H28_06495 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D K4H28_03795 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D K4H28_15815 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dtk03060] D K4H28_12325 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D K4H28_12490 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D K4H28_04230 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D K4H28_06410 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D K4H28_06405 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D K4H28_06415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D K4H28_16610 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D K4H28_16250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D K4H28_01145 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D K4H28_12245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D K4H28_16300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D K4H28_03590 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D K4H28_13050 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D K4H28_13055 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D K4H28_13060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D K4H28_05305 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D K4H28_06605 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D K4H28_01610 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dtk04122] D K4H28_10230 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D K4H28_00205 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D K4H28_13610 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D K4H28_01130 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D K4H28_13180 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D K4H28_13205 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D K4H28_13185 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D K4H28_00865 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D K4H28_13175 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D K4H28_05340 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D K4H28_10425 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:dtk03018] D K4H28_00310 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D K4H28_02205 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D K4H28_06270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D K4H28_05025 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D K4H28_10280 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D K4H28_13735 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D K4H28_06325 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D K4H28_06050 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D K4H28_01895 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D K4H28_03175 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D K4H28_11870 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D K4H28_09080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D K4H28_08605 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D K4H28_15560 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D K4H28_09930 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dtk03030] D K4H28_04135 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00720 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_08840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D K4H28_02840 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D K4H28_12005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D K4H28_02450 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D K4H28_11680 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D K4H28_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D K4H28_05545 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D K4H28_01775 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D K4H28_01340 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D K4H28_00895 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D K4H28_07130 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D K4H28_16180 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D K4H28_07410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dtk03410] D K4H28_12050 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D K4H28_07090 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D K4H28_04020 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D K4H28_15845 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D K4H28_05360 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D K4H28_15450 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D K4H28_05590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D K4H28_16180 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D K4H28_07045 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D K4H28_07410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dtk03420] D K4H28_06995 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D K4H28_01325 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D K4H28_11430 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D K4H28_06680 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D K4H28_00375 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D K4H28_16180 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D K4H28_07410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:dtk03430] D K4H28_07800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D K4H28_07640 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D K4H28_00375 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D K4H28_12205 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D K4H28_07705 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D K4H28_04940 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D K4H28_07045 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D K4H28_01340 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D K4H28_08840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D K4H28_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D K4H28_02840 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D K4H28_02450 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D K4H28_12005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D K4H28_04135 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00720 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11680 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D K4H28_07410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:dtk03440] D K4H28_07045 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D K4H28_01340 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D K4H28_05325 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D K4H28_02850 recR; recombination mediator RecR K06187 recR; recombination protein RecR D K4H28_07840 recA; recombinase RecA K03553 recA; recombination protein RecA D K4H28_16180 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D K4H28_14735 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D K4H28_14740 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D K4H28_14715 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D K4H28_06905 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D K4H28_05190 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D K4H28_08840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D K4H28_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D K4H28_02840 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D K4H28_02450 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D K4H28_12005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D K4H28_04135 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00720 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11680 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D K4H28_09395 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:dtk03250] D K4H28_00575 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dtk02010] D K4H28_08495 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D K4H28_08490 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D K4H28_08500 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D K4H28_08505 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D K4H28_08510 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D K4H28_11630 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D K4H28_11640 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D K4H28_11645 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D K4H28_07530 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D K4H28_07525 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D K4H28_07520 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D K4H28_00535 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D K4H28_00530 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D K4H28_00525 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D K4H28_00520 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D K4H28_02960 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D K4H28_10125 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D K4H28_11895 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D K4H28_02975 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D K4H28_02970 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D K4H28_02965 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D K4H28_10140 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D K4H28_14020 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D K4H28_10135 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D K4H28_10130 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D K4H28_12885 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D K4H28_12880 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D K4H28_07210 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D K4H28_11320 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D K4H28_11310 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D K4H28_12875 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D K4H28_07220 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D K4H28_12890 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D K4H28_11315 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D K4H28_12870 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D K4H28_07215 hypothetical protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D K4H28_11910 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D K4H28_11905 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D K4H28_11900 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D K4H28_01995 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D K4H28_01540 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D K4H28_01550 ABC transporter permease K10440 rbsC; ribose transport system permease protein D K4H28_02000 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D K4H28_01545 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D K4H28_02005 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D K4H28_02010 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D K4H28_04220 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D K4H28_04215 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D K4H28_04210 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D K4H28_04205 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D K4H28_08725 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D K4H28_04015 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D K4H28_04005 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D K4H28_04010 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D K4H28_04000 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D K4H28_05420 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D K4H28_14410 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D K4H28_08020 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D K4H28_08015 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D K4H28_08010 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D K4H28_08005 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D K4H28_10305 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D K4H28_10300 ABC transporter permease K02072 metI; D-methionine transport system permease protein D K4H28_10295 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D K4H28_13810 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D K4H28_13815 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D K4H28_13820 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D K4H28_13825 ATP-binding cassette domain-containing protein K12371 dppD; dipeptide transport system ATP-binding protein D K4H28_13830 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D K4H28_08320 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D K4H28_08310 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D K4H28_08305 ABC transporter permease K13895 yejE; microcin C transport system permease protein D K4H28_05605 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D K4H28_04875 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D K4H28_04885 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D K4H28_06505 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D K4H28_06500 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D K4H28_13220 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D K4H28_13215 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D K4H28_13210 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D K4H28_11670 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D K4H28_11665 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D K4H28_02685 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D K4H28_16315 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D K4H28_16310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D K4H28_16420 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D K4H28_06775 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D K4H28_05170 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D K4H28_16150 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D K4H28_11750 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D K4H28_13960 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D K4H28_09405 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:dtk02060] D K4H28_13875 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D K4H28_13880 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D K4H28_14870 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D K4H28_14885 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D K4H28_06450 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D K4H28_13885 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D K4H28_14875 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D K4H28_02700 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:dtk03070] D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein D K4H28_09475 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D K4H28_01730 type II secretion system F family protein K02455 gspF; general secretion pathway protein F D K4H28_09465 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D K4H28_01690 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G D K4H28_01695 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G D K4H28_01735 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D K4H28_09455 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D K4H28_01725 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D K4H28_09480 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D K4H28_12850 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D K4H28_06410 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D K4H28_06405 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D K4H28_12490 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D K4H28_04230 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D K4H28_12325 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D K4H28_06415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D K4H28_16610 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D K4H28_16250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D K4H28_16300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D K4H28_01145 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D K4H28_12245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D K4H28_13050 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D K4H28_13055 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D K4H28_13060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:dtk02020] D K4H28_11785 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D K4H28_11780 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D K4H28_07545 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D K4H28_04220 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D K4H28_11405 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D K4H28_11410 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D K4H28_00140 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D K4H28_00135 rstA; two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D K4H28_05290 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D K4H28_13390 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D K4H28_13385 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D K4H28_13575 hypothetical protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D K4H28_13580 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D K4H28_07350 flagellin K02406 fliC; flagellin D K4H28_09895 flagellin FliC K02406 fliC; flagellin D K4H28_11330 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D K4H28_07125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D K4H28_11335 flagellar motor protein K02556 motA; chemotaxis protein MotA D K4H28_08535 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D K4H28_08530 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D K4H28_08550 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D K4H28_08545 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D K4H28_08540 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D K4H28_13760 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D K4H28_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D K4H28_14635 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D K4H28_14605 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D K4H28_13315 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D K4H28_16595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16575 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16555 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16590 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16565 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16540 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_08060 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D K4H28_09390 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D K4H28_02815 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D K4H28_02810 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D K4H28_02860 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_00090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_09705 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D K4H28_09710 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_00315 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D K4H28_00320 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D K4H28_02690 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D K4H28_10945 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D K4H28_10950 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D K4H28_01265 methyltransferase domain-containing protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D K4H28_09315 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D K4H28_03730 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_01260 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_08225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_00035 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_04515 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_09760 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_15185 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_10870 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_04445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01525 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01250 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_01205 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_03890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01215 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01245 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_12605 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_01220 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_01225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_15940 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D K4H28_13285 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D K4H28_15935 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D K4H28_15925 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D K4H28_15930 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_13280 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_00430 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D K4H28_01280 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D K4H28_04000 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D K4H28_04005 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D K4H28_04010 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D K4H28_04015 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D K4H28_01405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_03320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_03325 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_05585 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_02640 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D K4H28_02635 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D K4H28_02630 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D K4H28_06925 c-type cytochrome K08738 CYC; cytochrome c D K4H28_14705 c-type cytochrome K08738 CYC; cytochrome c D K4H28_06965 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D K4H28_06970 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D K4H28_06975 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D K4H28_06980 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D K4H28_04750 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D K4H28_04745 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein D K4H28_05945 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D K4H28_02045 epsE; polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein D K4H28_06760 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D K4H28_01240 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D K4H28_01235 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D K4H28_02805 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D K4H28_07780 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D K4H28_02640 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dtk02024] D K4H28_08605 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D K4H28_06800 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D K4H28_06805 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D K4H28_15105 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D K4H28_14690 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D K4H28_13575 hypothetical protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D K4H28_13580 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D K4H28_08530 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D K4H28_00560 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D K4H28_14105 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D K4H28_14090 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D K4H28_14095 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D K4H28_14085 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D K4H28_05420 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D K4H28_14410 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D K4H28_08020 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D K4H28_08015 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D K4H28_08010 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D K4H28_08005 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D K4H28_04990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D K4H28_01405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_03320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_03325 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_05585 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_06720 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D K4H28_02405 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D K4H28_06235 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D K4H28_16610 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D K4H28_12490 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D K4H28_04230 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D K4H28_12325 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D K4H28_06415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D K4H28_16250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D K4H28_16300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D K4H28_01145 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D K4H28_12245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:dtk02030] D K4H28_03730 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_01260 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_08225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_00035 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_04515 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_09760 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_15185 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_10870 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_01995 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D K4H28_01540 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D K4H28_13810 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D K4H28_01250 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_01205 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_04445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01525 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_03890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01215 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01245 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01210 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D K4H28_01275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_12605 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_01220 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_01225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_01270 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D K4H28_01265 methyltransferase domain-containing protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D K4H28_09315 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D K4H28_01295 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D K4H28_11275 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D K4H28_11270 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D K4H28_07125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D K4H28_11335 flagellar motor protein K02556 motA; chemotaxis protein MotA D K4H28_07120 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D K4H28_02230 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:dtk02040] D K4H28_01285 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D K4H28_01290 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D K4H28_01295 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D K4H28_01305 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D K4H28_01310 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D K4H28_11280 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D K4H28_11275 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D K4H28_11270 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D K4H28_11265 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D K4H28_11260 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D K4H28_11255 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D K4H28_11250 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D K4H28_11295 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D K4H28_11290 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D K4H28_03110 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D K4H28_03115 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D K4H28_03120 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D K4H28_03125 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D K4H28_03130 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D K4H28_03135 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D K4H28_03140 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D K4H28_03145 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D K4H28_03155 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D K4H28_07350 flagellin K02406 fliC; flagellin D K4H28_09895 flagellin FliC K02406 fliC; flagellin D K4H28_07335 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D K4H28_07125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D K4H28_11335 flagellar motor protein K02556 motA; chemotaxis protein MotA D K4H28_07120 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D K4H28_02230 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D K4H28_07780 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D K4H28_01780 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D K4H28_02690 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D K4H28_01280 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D K4H28_11330 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D K4H28_06270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D K4H28_15205 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:dtk01501] D K4H28_15445 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D K4H28_01555 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D K4H28_06245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D K4H28_06240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D K4H28_06235 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein D K4H28_11120 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D K4H28_12770 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D K4H28_16350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D K4H28_15090 blaOXA; class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:dtk01502] D K4H28_16390 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D K4H28_02280 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D K4H28_16360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D K4H28_16365 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D K4H28_16380 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D K4H28_14635 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dtk01503] D K4H28_11405 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D K4H28_11410 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D K4H28_12675 pagP; lipid IV(A) palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D K4H28_13270 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D K4H28_07630 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D K4H28_05290 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D K4H28_00575 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D K4H28_06245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D K4H28_06240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein D K4H28_07140 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dtk01000] C 01001 Protein kinases [BR:dtk01001] D K4H28_08365 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D K4H28_02055 epsG; chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D K4H28_11785 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D K4H28_11405 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D K4H28_00140 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D K4H28_13390 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D K4H28_13575 hypothetical protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D K4H28_08535 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D K4H28_12180 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D K4H28_02815 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D K4H28_09705 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D K4H28_00315 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D K4H28_01250 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_01205 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:dtk01009] D K4H28_16280 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D K4H28_02150 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D K4H28_10460 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D K4H28_07020 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:dtk01002] D K4H28_06605 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D K4H28_01610 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D K4H28_12265 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D K4H28_03430 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D K4H28_00095 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D K4H28_05125 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D K4H28_12585 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D K4H28_12600 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D K4H28_04930 isomerizing glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D K4H28_09775 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D K4H28_10595 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D K4H28_10005 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D K4H28_14635 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D K4H28_11675 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D K4H28_11925 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D K4H28_08055 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D K4H28_10325 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D K4H28_09960 hypothetical protein K19689 ampS; aminopeptidase [EC:3.4.11.-] D K4H28_03525 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D K4H28_04185 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D K4H28_10650 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D K4H28_01100 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D K4H28_09690 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D K4H28_03345 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D K4H28_07165 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D K4H28_09940 ImpA family metalloprotease K21429 impA; immunomodulating metalloprotease D K4H28_04090 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D K4H28_05290 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D K4H28_02655 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-] D K4H28_06460 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D K4H28_09945 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D K4H28_07475 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D K4H28_02830 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D K4H28_09375 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D K4H28_09365 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D K4H28_06530 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D K4H28_01825 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D K4H28_05305 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D K4H28_10765 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D K4H28_02225 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D K4H28_10370 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D K4H28_10635 MFS transporter K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D K4H28_04965 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D K4H28_02420 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D K4H28_13650 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D K4H28_13645 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D K4H28_05355 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D K4H28_05225 tldD; metalloprotease TldD K03568 tldD; TldD protein D K4H28_10465 eco; serine protease inhibitor ecotin K08276 eco; ecotin D K4H28_00050 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D K4H28_08590 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D K4H28_08595 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:dtk01003] D K4H28_04115 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D K4H28_10185 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D K4H28_06020 glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D K4H28_02875 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D K4H28_00125 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D K4H28_11120 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D K4H28_02075 glycosyltransferase family 4 protein K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dtk01005] D K4H28_07140 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D K4H28_07135 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D K4H28_16410 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D K4H28_07150 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D K4H28_00565 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D K4H28_07685 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D K4H28_16260 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D K4H28_16265 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D K4H28_15980 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D K4H28_12675 pagP; lipid IV(A) palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D K4H28_13270 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D K4H28_06265 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D K4H28_07675 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D K4H28_02670 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D K4H28_02665 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D K4H28_06620 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D K4H28_11540 adenylyltransferase/cytidyltransferase family protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D K4H28_15975 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D K4H28_00500 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D K4H28_02340 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D K4H28_01865 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D K4H28_00475 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D K4H28_07075 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D K4H28_10840 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dtk01011] D K4H28_12920 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D K4H28_09740 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D K4H28_16385 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D K4H28_16370 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D K4H28_16355 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D K4H28_16390 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D K4H28_02280 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D K4H28_07550 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D K4H28_16365 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D K4H28_16380 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D K4H28_16230 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D K4H28_11850 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D K4H28_11120 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D K4H28_00125 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D K4H28_12770 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D K4H28_16350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D K4H28_09945 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D K4H28_02830 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D K4H28_07475 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D K4H28_02875 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D K4H28_14635 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D K4H28_03775 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D K4H28_05750 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D K4H28_01035 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D K4H28_01375 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D K4H28_12780 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D K4H28_07630 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D K4H28_00325 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:dtk01004] D K4H28_00985 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D K4H28_00980 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D K4H28_01000 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D K4H28_03235 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_00990 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D K4H28_07145 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D K4H28_15220 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_00665 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D K4H28_01875 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D K4H28_04030 acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D K4H28_11530 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D K4H28_11390 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D K4H28_04990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D K4H28_00975 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D K4H28_03300 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D K4H28_00480 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:dtk01008] D K4H28_04850 isochorismatase family protein K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D K4H28_04845 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] C 01006 Prenyltransferases [BR:dtk01006] D K4H28_04945 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D K4H28_11625 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D K4H28_07180 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D K4H28_01355 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D K4H28_07645 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D K4H28_03415 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D K4H28_13755 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:dtk01007] D K4H28_01040 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K4H28_09415 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D K4H28_05070 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D K4H28_06495 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D K4H28_03795 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D K4H28_15815 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D K4H28_06200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D K4H28_01115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D K4H28_07255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D K4H28_06600 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D K4H28_11695 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D K4H28_02460 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K4H28_06310 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D K4H28_08705 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D K4H28_08625 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D K4H28_00455 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D K4H28_00465 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D K4H28_09195 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D K4H28_05575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D K4H28_04315 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D K4H28_08425 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D K4H28_04335 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D K4H28_04340 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D K4H28_02180 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D K4H28_09815 alaC; alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D K4H28_11860 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D K4H28_06545 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D K4H28_01395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_09135 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D K4H28_03050 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D K4H28_08520 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D K4H28_08025 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D K4H28_03715 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D K4H28_09045 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D K4H28_14345 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D K4H28_09110 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D K4H28_02350 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D K4H28_15075 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D K4H28_09160 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dtk00194] D K4H28_15530 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D K4H28_15525 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D K4H28_15520 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D K4H28_15515 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D K4H28_15510 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D K4H28_15505 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D K4H28_15500 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D K4H28_15495 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D K4H28_15490 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dtk03000] D K4H28_15830 GyrI-like domain-containing protein K13652 K13652; AraC family transcriptional regulator D K4H28_05415 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D K4H28_16085 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D K4H28_10345 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D K4H28_01085 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D K4H28_08675 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D K4H28_12220 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D K4H28_10170 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D K4H28_01990 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D K4H28_00860 substrate-binding domain-containing protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D K4H28_10150 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D K4H28_05625 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D K4H28_16195 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D K4H28_04080 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D K4H28_13460 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D K4H28_07885 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D K4H28_14695 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D K4H28_01405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_03320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_03325 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_05585 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D K4H28_05250 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D K4H28_10225 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D K4H28_04465 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D K4H28_10485 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D K4H28_09800 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D K4H28_03570 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D K4H28_11180 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D K4H28_12685 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D K4H28_04415 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D K4H28_14040 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D K4H28_07995 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D K4H28_05520 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D K4H28_03270 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D K4H28_15485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D K4H28_05755 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D K4H28_03440 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D K4H28_16205 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D K4H28_03755 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D K4H28_14700 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D K4H28_06725 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D K4H28_16335 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dtk03021] D K4H28_12300 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D K4H28_12460 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D K4H28_12455 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D K4H28_10440 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D K4H28_01780 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D K4H28_06555 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D K4H28_16165 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D K4H28_05270 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D K4H28_11030 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D K4H28_16325 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D K4H28_02690 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D K4H28_11330 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D K4H28_05000 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D K4H28_06695 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D K4H28_12485 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D K4H28_02625 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D K4H28_02620 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D K4H28_13500 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ D K4H28_14700 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D K4H28_04165 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D K4H28_07815 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D K4H28_03175 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dtk03019] D K4H28_02205 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D K4H28_02445 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D K4H28_05315 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D K4H28_06050 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D K4H28_10645 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D K4H28_10280 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D K4H28_13735 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D K4H28_06325 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D K4H28_01895 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D K4H28_06270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D K4H28_05025 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D K4H28_03175 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D K4H28_11870 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D K4H28_09080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D K4H28_08605 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D K4H28_15560 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D K4H28_09930 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D K4H28_00310 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D K4H28_02710 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D K4H28_09270 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:dtk03011] D K4H28_06645 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D K4H28_07200 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D K4H28_12395 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D K4H28_12305 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D K4H28_12340 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D K4H28_05060 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D K4H28_12445 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D K4H28_12355 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D K4H28_00615 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D K4H28_12430 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D K4H28_12310 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D K4H28_12450 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D K4H28_12315 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D K4H28_12360 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D K4H28_05020 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D K4H28_12240 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D K4H28_12380 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D K4H28_05050 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D K4H28_12405 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D K4H28_11845 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D K4H28_01765 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D K4H28_12475 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D K4H28_12410 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D K4H28_12425 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D K4H28_12420 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D K4H28_12365 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D K4H28_12350 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D K4H28_05045 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D K4H28_12470 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D K4H28_12480 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D K4H28_12465 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D K4H28_00610 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D K4H28_12375 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D K4H28_12330 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D K4H28_12390 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D K4H28_12295 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D K4H28_12345 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D K4H28_12225 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D K4H28_04330 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D K4H28_11620 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D K4H28_12400 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D K4H28_12415 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D K4H28_12370 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D K4H28_11615 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D K4H28_11350 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D K4H28_12385 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D K4H28_12335 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D K4H28_03180 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D K4H28_00970 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D K4H28_11355 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D K4H28_16625 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D K4H28_04325 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D K4H28_12320 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D K4H28_15875 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D K4H28_01175 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:dtk03009] D K4H28_05315 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D K4H28_08365 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D K4H28_10645 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D K4H28_05320 era; GTPase Era K03595 era; GTPase D K4H28_11610 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D K4H28_14700 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D K4H28_05000 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D K4H28_06695 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D K4H28_12485 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D K4H28_13550 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D K4H28_09645 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D K4H28_02615 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D K4H28_09695 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D K4H28_16295 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D K4H28_16415 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D K4H28_15475 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D K4H28_16340 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D K4H28_00955 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D K4H28_01850 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D K4H28_04085 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D K4H28_13155 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D K4H28_05240 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D K4H28_04180 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D K4H28_15645 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D K4H28_16110 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D K4H28_13350 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D K4H28_15410 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D K4H28_00715 class I SAM-dependent methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D K4H28_11570 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D K4H28_07295 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D K4H28_08645 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D K4H28_02385 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D K4H28_11475 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D K4H28_02400 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D K4H28_11950 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D K4H28_07810 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D K4H28_02210 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D K4H28_11230 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D K4H28_11480 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D K4H28_03840 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D K4H28_13160 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D K4H28_12235 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D K4H28_00030 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D K4H28_10080 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D K4H28_10285 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D K4H28_04655 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D K4H28_02205 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D K4H28_02445 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D K4H28_03760 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D K4H28_06840 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D K4H28_10660 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D K4H28_08610 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D K4H28_14845 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D K4H28_08600 hflX; GTPase HflX K03665 hflX; GTPase D K4H28_08770 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D K4H28_10435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D K4H28_05010 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D K4H28_04995 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D K4H28_16100 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D K4H28_00170 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D K4H28_11000 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D K4H28_04175 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D K4H28_05350 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D K4H28_02695 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D K4H28_15550 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D K4H28_00965 YceD family protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dtk03016] D K4H28_10900 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D K4H28_01040 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K4H28_05575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D K4H28_06600 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D K4H28_02460 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K4H28_07255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D K4H28_09415 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D K4H28_01115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D K4H28_06310 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D K4H28_08705 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D K4H28_08425 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D K4H28_04315 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D K4H28_09195 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D K4H28_06200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D K4H28_11695 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D K4H28_08625 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D K4H28_04335 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D K4H28_04340 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D K4H28_06495 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D K4H28_03795 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D K4H28_15815 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D K4H28_02740 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D K4H28_13045 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D K4H28_10410 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D K4H28_06885 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D K4H28_05085 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D K4H28_05015 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D K4H28_10230 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D K4H28_08770 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D K4H28_07645 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D K4H28_16605 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D K4H28_15470 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D K4H28_16620 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D K4H28_03365 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D K4H28_12645 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1] D K4H28_07850 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D K4H28_00455 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D K4H28_00465 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D K4H28_05070 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D K4H28_08975 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D K4H28_12690 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D K4H28_06525 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D K4H28_10990 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D K4H28_12230 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D K4H28_08125 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D K4H28_07975 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D K4H28_07105 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D K4H28_05200 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D K4H28_11475 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D K4H28_02400 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D K4H28_01130 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D K4H28_00300 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D K4H28_13610 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D K4H28_10240 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D K4H28_00670 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D K4H28_10060 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D K4H28_14785 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D K4H28_00925 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D K4H28_14775 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D K4H28_06535 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D K4H28_07620 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D K4H28_10055 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D K4H28_01760 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D K4H28_07625 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D K4H28_05040 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D K4H28_06050 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D K4H28_05025 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dtk03012] D K4H28_15620 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D K4H28_05005 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D K4H28_04320 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D K4H28_06365 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D K4H28_07195 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D K4H28_12435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D K4H28_12500 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D K4H28_12440 fusA; elongation factor G K02355 fusA; elongation factor G D K4H28_12650 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D K4H28_07185 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D K4H28_14310 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D K4H28_15885 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D K4H28_01985 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D K4H28_09595 elongation factor P K02356 efp; elongation factor P D K4H28_06315 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D K4H28_03815 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D K4H28_03655 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:dtk03110] D K4H28_11500 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D K4H28_08830 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D K4H28_09370 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D K4H28_10925 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D K4H28_02150 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D K4H28_11870 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D K4H28_10250 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D K4H28_13730 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D K4H28_09080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D K4H28_11865 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D K4H28_10245 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D K4H28_10630 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D K4H28_11875 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D K4H28_06105 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D K4H28_09075 co-chaperone GroES K04078 groES; chaperonin GroES D K4H28_05290 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D K4H28_04185 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D K4H28_15495 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D K4H28_01145 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D K4H28_03630 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D K4H28_01510 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D K4H28_00575 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D K4H28_00570 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D K4H28_03350 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D K4H28_04665 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D K4H28_03265 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D K4H28_15035 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D K4H28_16060 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D K4H28_09635 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D K4H28_03170 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D K4H28_07485 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D K4H28_01150 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D K4H28_14320 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D K4H28_03075 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D K4H28_13240 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:dtk04131] D K4H28_08650 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D K4H28_06755 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D K4H28_03590 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D K4H28_11155 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D K4H28_03835 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_01320 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_02150 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:dtk03051] D K4H28_02150 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:dtk03032] D K4H28_00895 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D K4H28_04430 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_06305 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_09360 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_04345 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D K4H28_06640 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D K4H28_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D K4H28_05545 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D K4H28_01775 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D K4H28_01340 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D K4H28_08840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D K4H28_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D K4H28_11680 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D K4H28_02450 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D K4H28_12005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D K4H28_04135 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00720 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_02840 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D K4H28_07130 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D K4H28_16180 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D K4H28_07410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D K4H28_02590 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D K4H28_09175 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D K4H28_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D K4H28_14630 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D K4H28_14450 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D K4H28_09660 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dtk03036] D K4H28_05315 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D K4H28_00370 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D K4H28_04430 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_06305 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_09360 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_04345 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D K4H28_06640 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D K4H28_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D K4H28_12685 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D K4H28_08605 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D K4H28_12220 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D K4H28_07865 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D K4H28_07420 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D K4H28_11575 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D K4H28_05735 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D K4H28_05740 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D K4H28_16400 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D K4H28_06275 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D K4H28_16310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D K4H28_16350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D K4H28_05555 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D K4H28_11345 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D K4H28_16345 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D K4H28_16395 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D K4H28_16375 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D K4H28_16315 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D K4H28_16405 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D K4H28_14855 cell division protein ZapA K09888 zapA; cell division protein ZapA D K4H28_12275 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D K4H28_03945 AFG1 family ATPase K06916 zapE; cell division protein ZapE D K4H28_07630 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D K4H28_06245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D K4H28_08040 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D K4H28_08045 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D K4H28_08050 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D K4H28_12755 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D K4H28_12760 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D K4H28_12765 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D K4H28_12775 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D K4H28_15480 AAA family ATPase K03496 parA; chromosome partitioning protein D K4H28_00940 ParA family protein K03496 parA; chromosome partitioning protein D K4H28_02155 ParA family protein K03496 parA; chromosome partitioning protein D K4H28_07450 ParA family protein K03496 parA; chromosome partitioning protein D K4H28_15485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D K4H28_14630 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D K4H28_14450 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D K4H28_15470 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D K4H28_15475 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D K4H28_09035 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D K4H28_11510 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D K4H28_07425 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D K4H28_15920 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:dtk03400] D K4H28_11515 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D K4H28_03735 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D K4H28_07090 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D K4H28_04020 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D K4H28_12050 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D K4H28_06865 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D K4H28_05435 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D K4H28_12985 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D K4H28_05360 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D K4H28_15845 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D K4H28_15450 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D K4H28_05590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D K4H28_07045 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D K4H28_07410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D K4H28_16180 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D K4H28_01325 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D K4H28_11430 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D K4H28_06680 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D K4H28_00375 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D K4H28_12460 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D K4H28_12455 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D K4H28_12300 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D K4H28_10440 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D K4H28_06995 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D K4H28_07800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D K4H28_07640 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D K4H28_12205 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D K4H28_07705 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D K4H28_04940 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D K4H28_08840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D K4H28_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D K4H28_11680 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D K4H28_02450 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D K4H28_12005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D K4H28_04135 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_11380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00720 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_00910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D K4H28_02840 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D K4H28_01340 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D K4H28_05190 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D K4H28_07840 recA; recombinase RecA K03553 recA; recombination protein RecA D K4H28_14735 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D K4H28_14740 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D K4H28_14715 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D K4H28_09395 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D K4H28_01450 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11 D K4H28_03165 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D K4H28_06905 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D K4H28_05325 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D K4H28_02850 recR; recombination mediator RecR K06187 recR; recombination protein RecR D K4H28_05765 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D K4H28_07535 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D K4H28_09175 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D K4H28_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D K4H28_09660 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D K4H28_04430 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_06305 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_09360 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D K4H28_12685 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D K4H28_04345 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D K4H28_06640 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D K4H28_01895 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D K4H28_00370 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D K4H28_15595 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D K4H28_01830 Y-family DNA polymerase K03502 umuC; DNA polymerase V D K4H28_01825 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D K4H28_06530 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D K4H28_12040 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D K4H28_01370 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D K4H28_04670 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D K4H28_04690 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:dtk03029] D K4H28_02635 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D K4H28_05005 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D K4H28_04320 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D K4H28_07195 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D K4H28_12435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D K4H28_12500 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D K4H28_12440 fusA; elongation factor G K02355 fusA; elongation factor G D K4H28_05320 era; GTPase Era K03595 era; GTPase D K4H28_06495 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D K4H28_02460 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K4H28_08705 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D K4H28_01115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D K4H28_12745 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D K4H28_12735 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D K4H28_12750 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D K4H28_01340 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D K4H28_07160 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D K4H28_11870 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D K4H28_11875 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D K4H28_09080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D K4H28_09075 co-chaperone GroES K04078 groES; chaperonin GroES D K4H28_11865 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D K4H28_10230 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D K4H28_10245 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D K4H28_14320 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D K4H28_07425 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D K4H28_13755 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D K4H28_13760 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D K4H28_16610 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D K4H28_06385 SCO family protein K07152 SCO1; protein SCO1 D K4H28_02150 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dtk02000] D K4H28_16420 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D K4H28_06775 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D K4H28_05170 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D K4H28_16150 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D K4H28_11750 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D K4H28_13960 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D K4H28_09405 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D K4H28_03825 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D K4H28_08495 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D K4H28_08490 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D K4H28_08500 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D K4H28_08505 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D K4H28_08510 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D K4H28_11630 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D K4H28_11640 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D K4H28_11645 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D K4H28_07530 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D K4H28_07525 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D K4H28_07520 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D K4H28_00535 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D K4H28_00530 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D K4H28_00525 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D K4H28_00520 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D K4H28_00560 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D K4H28_14105 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D K4H28_14090 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D K4H28_14095 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D K4H28_14085 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D K4H28_02960 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D K4H28_10125 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D K4H28_11895 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D K4H28_02975 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D K4H28_02970 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D K4H28_02965 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D K4H28_11910 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D K4H28_11905 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D K4H28_11900 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D K4H28_10140 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D K4H28_14020 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D K4H28_10135 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D K4H28_10130 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D K4H28_01995 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D K4H28_01540 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D K4H28_01550 ABC transporter permease K10440 rbsC; ribose transport system permease protein D K4H28_02000 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D K4H28_01545 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D K4H28_02005 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D K4H28_12880 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D K4H28_07210 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D K4H28_11320 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D K4H28_11310 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D K4H28_12875 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D K4H28_07220 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D K4H28_11315 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D K4H28_12870 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D K4H28_07215 hypothetical protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D K4H28_11325 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D K4H28_12885 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D K4H28_12890 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D K4H28_04220 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D K4H28_04215 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D K4H28_04210 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D K4H28_04205 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D K4H28_08725 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D K4H28_04015 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D K4H28_04005 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D K4H28_04010 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D K4H28_04000 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D K4H28_05420 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D K4H28_14410 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D K4H28_08020 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D K4H28_08015 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D K4H28_08010 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D K4H28_08005 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D K4H28_10305 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D K4H28_10300 ABC transporter permease K02072 metI; D-methionine transport system permease protein D K4H28_10295 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D K4H28_03665 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_03720 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_06115 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_02195 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_13705 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_14430 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_15170 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_00710 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D K4H28_02190 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D K4H28_09650 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D K4H28_13810 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D K4H28_13815 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D K4H28_13820 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D K4H28_13825 ATP-binding cassette domain-containing protein K12371 dppD; dipeptide transport system ATP-binding protein D K4H28_13830 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D K4H28_08320 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D K4H28_08310 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D K4H28_08305 ABC transporter permease K13895 yejE; microcin C transport system permease protein D K4H28_05605 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D K4H28_00765 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D K4H28_00760 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D K4H28_00755 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D K4H28_04875 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D K4H28_04885 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D K4H28_04775 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D K4H28_04790 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D K4H28_04795 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D K4H28_04800 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D K4H28_00400 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D K4H28_00390 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D K4H28_00385 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D K4H28_11670 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D K4H28_11665 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D K4H28_02685 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D K4H28_06505 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D K4H28_06500 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D K4H28_13220 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D K4H28_13215 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D K4H28_13210 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D K4H28_16315 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D K4H28_16310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D K4H28_00815 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein D K4H28_12905 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D K4H28_12900 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D K4H28_13985 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D K4H28_03745 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D K4H28_15725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D K4H28_01885 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D K4H28_07760 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D K4H28_15720 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D K4H28_01880 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D K4H28_07765 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D K4H28_02730 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D K4H28_00585 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D K4H28_06670 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D K4H28_03550 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D K4H28_02270 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D K4H28_15445 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D K4H28_06300 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D K4H28_08940 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D K4H28_13875 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D K4H28_13880 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D K4H28_14870 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D K4H28_14875 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D K4H28_14885 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D K4H28_06450 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D K4H28_13885 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D K4H28_02700 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D K4H28_08740 NAD-binding protein K10716 kch; voltage-gated potassium channel D K4H28_10105 ammonium transporter K03320 amt; ammonium transporter, Amt family D K4H28_13665 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D K4H28_11890 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D K4H28_12695 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D K4H28_02625 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D K4H28_03015 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D K4H28_12725 formate/nitrite transporter family protein K02598 nirC; nitrite transporter D K4H28_07300 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D K4H28_11505 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D K4H28_14305 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D K4H28_07125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D K4H28_11335 flagellar motor protein K02556 motA; chemotaxis protein MotA D K4H28_07120 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D K4H28_02230 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D K4H28_07700 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D K4H28_09565 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D K4H28_07695 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D K4H28_09560 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D K4H28_14745 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D K4H28_14750 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D K4H28_04435 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D K4H28_12545 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D K4H28_13930 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D K4H28_11945 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D K4H28_09535 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D K4H28_13750 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D K4H28_09180 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D K4H28_04830 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein D K4H28_16115 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D K4H28_06235 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D K4H28_05945 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D K4H28_02045 epsE; polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein D K4H28_07160 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D K4H28_06440 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D K4H28_11225 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D K4H28_07890 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D K4H28_02680 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D K4H28_02675 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D K4H28_11005 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D K4H28_00250 amino acid permease K11733 lysP; lysine-specific permease D K4H28_13090 basic amino acid/polyamine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D K4H28_13570 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D K4H28_00360 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D K4H28_06240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D K4H28_13900 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D K4H28_04055 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D K4H28_03915 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D K4H28_02405 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D K4H28_00850 gntU; gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D K4H28_00245 sodium:proton antiporter K07084 yuiF; putative amino acid transporter D K4H28_15095 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D K4H28_13365 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D K4H28_05790 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D K4H28_11370 cation acetate symporter K14393 actP; cation/acetate symporter D K4H28_15190 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D K4H28_08765 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D K4H28_02660 monovalent cation:proton antiporter-2 (CPA2) family protein K03455 KEA1_2_3; K+:H+ antiporter D K4H28_03625 monovalent cation:proton antiporter-2 (CPA2) family protein K26735 KEA4_5_6; K+:H+ antiporter D K4H28_09720 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D K4H28_09715 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D K4H28_09425 uracil-xanthine permease family protein K02824 uraA; uracil permease D K4H28_06750 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D K4H28_06770 amino acid permease K03837 sdaC; serine transporter D K4H28_14150 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D K4H28_14780 chloride channel protein K03281 clcA; chloride channel protein, CIC family D K4H28_06940 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family D K4H28_10495 chrA; chromate efflux transporter K07240 chrA; chromate transporter D K4H28_13415 chrA; chromate efflux transporter K07240 chrA; chromate transporter D K4H28_09985 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D K4H28_07510 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D K4H28_07555 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family D K4H28_03590 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D K4H28_03595 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D K4H28_13130 NADH-quinone oxidoreductase subunit K K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D K4H28_13110 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D K4H28_13115 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D K4H28_13120 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D K4H28_11850 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D K4H28_00330 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D K4H28_12215 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D K4H28_08730 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D K4H28_09725 LysE family translocator K06895 lysE; L-lysine exporter family protein LysE/ArgO D K4H28_00215 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D K4H28_14570 LysE family translocator K05835 rhtC; threonine efflux protein D K4H28_03220 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein D K4H28_03025 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D K4H28_03030 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D K4H28_14195 MarC family protein K05595 marC; multiple antibiotic resistance protein D K4H28_16375 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D K4H28_06755 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D K4H28_13430 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D K4H28_05710 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein D K4H28_14710 TonB family protein K03832 tonB; periplasmic protein TonB D K4H28_14765 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D K4H28_14760 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D K4H28_16145 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D K4H28_11745 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D K4H28_00355 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D K4H28_06245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D K4H28_13955 macA; macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D K4H28_02055 epsG; chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D K4H28_02050 epsF; chain length determinant protein EpsF K25590 epsF; protein tyrosine kinase modulator D K4H28_12660 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D K4H28_01835 tryptophan-rich sensory protein K05770 TSPO; translocator protein D K4H28_08180 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D K4H28_13235 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:dtk02044] D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein D K4H28_16150 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D K4H28_11750 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D K4H28_16145 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D K4H28_11745 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D K4H28_16115 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D K4H28_09475 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D K4H28_01725 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D K4H28_09480 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D K4H28_12850 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D K4H28_01730 type II secretion system F family protein K02455 gspF; general secretion pathway protein F D K4H28_09465 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D K4H28_01690 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G D K4H28_01695 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G D K4H28_01735 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D K4H28_09455 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D K4H28_12265 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D K4H28_10945 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D K4H28_10950 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D K4H28_12255 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D K4H28_12260 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D K4H28_12845 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D K4H28_08775 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D K4H28_15925 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D K4H28_15930 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_13280 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_13285 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D K4H28_15935 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D K4H28_15940 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D K4H28_11115 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D K4H28_11110 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D K4H28_11105 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D K4H28_11100 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D K4H28_11095 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D K4H28_10705 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D K4H28_04985 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D K4H28_10700 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D K4H28_13745 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D K4H28_12000 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D K4H28_10720 YggT family protein K02221 yggT; YggT family protein D K4H28_03260 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D K4H28_03085 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D K4H28_11295 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D K4H28_11290 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D K4H28_07315 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D K4H28_01290 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D K4H28_01305 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D K4H28_11270 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D K4H28_11265 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D K4H28_11260 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D K4H28_11255 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D K4H28_11250 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D K4H28_03075 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D K4H28_05820 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D K4H28_05830 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D K4H28_05835 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D K4H28_16595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16575 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16555 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16590 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16565 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16540 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D K4H28_01145 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D K4H28_06410 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D K4H28_12490 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D K4H28_06405 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D K4H28_04230 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D K4H28_12325 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D K4H28_12245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D K4H28_16300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D K4H28_06415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D K4H28_16610 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D K4H28_13050 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D K4H28_13055 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D K4H28_13060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dtk02042] D K4H28_03460 hypothetical protein K10954 zot; zona occludens toxin D K4H28_11945 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D K4H28_09535 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D K4H28_13750 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:dtk02022] D K4H28_11785 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D K4H28_11780 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D K4H28_11405 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D K4H28_11410 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D K4H28_00140 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D K4H28_00135 rstA; two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D K4H28_13390 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D K4H28_13385 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D K4H28_13575 hypothetical protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D K4H28_13580 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D K4H28_08535 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D K4H28_08530 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D K4H28_02985 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D K4H28_08295 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D K4H28_13315 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D K4H28_14605 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D K4H28_12180 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D K4H28_12175 btsR; two-component system response regulator BtsR K02477 K02477; two-component system, LytTR family, response regulator D K4H28_02815 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D K4H28_02810 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D K4H28_09705 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D K4H28_09710 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D K4H28_00315 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D K4H28_00320 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D K4H28_01250 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_01205 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_03890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01215 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01245 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_12605 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_01220 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_01225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_15925 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D K4H28_15930 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_13280 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_00430 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D K4H28_01280 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D K4H28_01240 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator C 02035 Bacterial motility proteins [BR:dtk02035] D K4H28_01250 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_01205 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D K4H28_04445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01525 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D K4H28_01270 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D K4H28_01265 methyltransferase domain-containing protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D K4H28_09315 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D K4H28_01275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_12605 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D K4H28_03890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01215 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01245 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D K4H28_01210 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D K4H28_01220 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_01225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D K4H28_03730 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_01260 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_08225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_00035 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_04515 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_09760 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_15185 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_10870 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D K4H28_01305 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D K4H28_01310 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D K4H28_11265 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D K4H28_11260 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D K4H28_11255 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D K4H28_11250 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D K4H28_11295 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D K4H28_11290 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D K4H28_01295 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D K4H28_11275 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D K4H28_11270 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D K4H28_01290 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D K4H28_03145 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D K4H28_03140 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D K4H28_11280 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D K4H28_01285 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D K4H28_03110 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D K4H28_03115 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D K4H28_03120 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D K4H28_03130 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D K4H28_03135 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D K4H28_03125 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D K4H28_03155 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D K4H28_07350 flagellin K02406 fliC; flagellin D K4H28_09895 flagellin FliC K02406 fliC; flagellin D K4H28_07335 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D K4H28_11330 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D K4H28_07125 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D K4H28_11335 flagellar motor protein K02556 motA; chemotaxis protein MotA D K4H28_07120 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D K4H28_02230 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D K4H28_01280 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D K4H28_07785 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D K4H28_07780 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D K4H28_11300 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D K4H28_11305 AAA family ATPase K04562 flhG; flagellar biosynthesis protein FlhG D K4H28_15925 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D K4H28_15930 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_13280 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D K4H28_13285 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D K4H28_15935 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D K4H28_15940 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D K4H28_00320 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D K4H28_00315 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D K4H28_10705 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D K4H28_04985 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D K4H28_10700 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D K4H28_13745 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D K4H28_10945 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D K4H28_10950 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D K4H28_12255 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D K4H28_12260 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D K4H28_12845 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D K4H28_12265 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D K4H28_11095 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D K4H28_11100 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D K4H28_11105 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D K4H28_11110 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D K4H28_11115 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D K4H28_12000 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D K4H28_08775 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D K4H28_05820 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D K4H28_05830 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D K4H28_05835 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D K4H28_16595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16575 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16555 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16590 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16565 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D K4H28_16540 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dtk04812] D K4H28_12755 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D K4H28_16405 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D K4H28_16400 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D K4H28_08040 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D K4H28_08045 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D K4H28_08050 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D K4H28_15480 AAA family ATPase K03496 parA; chromosome partitioning protein D K4H28_00940 ParA family protein K03496 parA; chromosome partitioning protein D K4H28_02155 ParA family protein K03496 parA; chromosome partitioning protein D K4H28_07450 ParA family protein K03496 parA; chromosome partitioning protein D K4H28_15485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dtk04147] D K4H28_02150 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D K4H28_06270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D K4H28_11155 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D K4H28_03880 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D K4H28_03835 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_01320 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D K4H28_00575 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D K4H28_03940 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D K4H28_09080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D K4H28_11870 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D K4H28_11185 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D K4H28_08695 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D K4H28_12435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D K4H28_12500 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D K4H28_13045 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D K4H28_04990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D K4H28_07465 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D K4H28_16280 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D K4H28_07665 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D K4H28_06745 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D K4H28_15780 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D K4H28_03215 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D K4H28_10205 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D K4H28_02860 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_00090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D K4H28_16025 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D K4H28_10655 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D K4H28_12680 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D K4H28_10650 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D K4H28_05670 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D K4H28_02795 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D K4H28_11170 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D K4H28_04225 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D K4H28_01010 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:dtk02048] D K4H28_04585 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D K4H28_16405 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D K4H28_12755 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D K4H28_14630 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D K4H28_14450 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D K4H28_01040 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K4H28_05650 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D K4H28_10230 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:dtk01504] D K4H28_06300 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D K4H28_14650 AAA family ATPase K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-] D K4H28_14635 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D K4H28_11405 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D K4H28_11410 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D K4H28_06245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D K4H28_06240 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D K4H28_06235 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D K4H28_00355 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D K4H28_00360 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D K4H28_13460 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D K4H28_00365 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dtk03100] D K4H28_02295 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D K4H28_15015 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D K4H28_15865 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D K4H28_01160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D K4H28_15380 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D K4H28_01785 tRNA-Ile K14230 tRNA-Met; tRNA Met D K4H28_06220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D K4H28_01175 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D K4H28_06655 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D K4H28_15165 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D K4H28_03565 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D K4H28_07305 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D K4H28_04070 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D K4H28_02785 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D K4H28_12990 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D K4H28_15315 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D K4H28_15290 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D K4H28_05440 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D K4H28_06540 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D K4H28_02325 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D K4H28_06920 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D K4H28_04660 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D K4H28_08140 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D K4H28_10090 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D K4H28_10095 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D K4H28_05445 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D K4H28_04065 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D K4H28_15325 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D K4H28_07950 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D K4H28_09550 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D K4H28_09810 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D K4H28_01360 hpnE; hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D K4H28_02800 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D K4H28_06790 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D K4H28_13400 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D K4H28_10940 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D K4H28_08855 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D K4H28_06565 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D K4H28_02435 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D K4H28_08390 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D K4H28_14170 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D K4H28_11010 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D K4H28_07880 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D K4H28_07875 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D K4H28_12520 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D K4H28_13890 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D K4H28_08035 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D K4H28_00640 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D K4H28_05210 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D K4H28_03505 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D K4H28_14930 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D K4H28_02705 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D K4H28_05715 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D K4H28_15565 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D K4H28_10470 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D K4H28_11995 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D K4H28_00800 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D K4H28_15625 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D K4H28_09680 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D K4H28_05220 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D K4H28_00960 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D K4H28_08275 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D K4H28_00210 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D K4H28_09735 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D K4H28_12070 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D K4H28_12075 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D K4H28_12080 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D K4H28_06955 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D K4H28_01595 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D K4H28_05065 ferredoxin family protein K05524 fdxA; ferredoxin D K4H28_12065 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D K4H28_12060 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D K4H28_12085 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D K4H28_10235 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D K4H28_13325 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D K4H28_13345 NapC/NirT family cytochrome c K02569 napC; cytochrome c-type protein NapC D K4H28_02790 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D K4H28_10710 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D K4H28_06630 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D K4H28_05960 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D K4H28_15570 heme biosynthesis protein HemY K02498 hemY; HemY protein D K4H28_11760 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D K4H28_08235 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D K4H28_13675 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D K4H28_13655 SCP2 sterol-binding domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D K4H28_13195 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D K4H28_03885 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D K4H28_09600 DoxX family protein K15977 K15977; putative oxidoreductase D K4H28_14325 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase D K4H28_09870 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D K4H28_03865 cold-shock protein K03704 cspA; cold shock protein D K4H28_11490 cold-shock protein K03704 cspA; cold shock protein D K4H28_13670 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D K4H28_07445 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D K4H28_11495 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D K4H28_09380 tig; trigger factor K03545 tig; trigger factor D K4H28_06915 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D K4H28_03295 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D K4H28_14595 ATP-binding protein K07391 comM; magnesium chelatase family protein D K4H28_10865 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D K4H28_15695 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D K4H28_00605 OsmC family protein K07397 yhfA; putative redox protein D K4H28_15910 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D K4H28_02825 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein C 99976 Replication and repair D K4H28_05425 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D K4H28_06585 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D K4H28_01860 YraN family protein K07460 yraN; putative endonuclease D K4H28_09670 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D K4H28_09190 replication-associated recombination protein A K07478 ycaJ; putative ATPase D K4H28_01185 IS30 family transposase K07482 K07482; transposase, IS30 family D K4H28_04400 IS3 family transposase K07497 K07497; putative transposase D K4H28_15820 IS3 family transposase K07497 K07497; putative transposase D K4H28_16560 IS3 family transposase K07497 K07497; putative transposase D K4H28_05890 IS3 family transposase K07497 K07497; putative transposase D K4H28_01065 IS3 family transposase K07497 K07497; putative transposase D K4H28_01620 IS3 family transposase K07497 K07497; putative transposase D K4H28_08100 IS3 family transposase K07497 K07497; putative transposase D K4H28_08955 IS3 family transposase K07497 K07497; putative transposase D K4H28_01195 IS3 family transposase K07497 K07497; putative transposase D K4H28_04910 IS3 family transposase K07497 K07497; putative transposase D K4H28_05805 IS3 family transposase K07497 K07497; putative transposase D K4H28_08105 IS3 family transposase K07497 K07497; putative transposase D K4H28_08475 IS3 family transposase K07497 K07497; putative transposase D K4H28_09855 IS3 family transposase K07497 K07497; putative transposase D K4H28_13845 IS3 family transposase K07497 K07497; putative transposase D K4H28_14050 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D K4H28_12620 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D K4H28_02845 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC D K4H28_12995 DASH family cryptochrome K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D K4H28_08400 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D K4H28_02260 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D K4H28_07590 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D K4H28_03620 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D K4H28_06880 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D K4H28_08370 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D K4H28_04715 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D K4H28_03280 septation protein A K06190 ispZ; intracellular septation protein D K4H28_14230 sporulation protein K06377 spo0M; sporulation-control protein D K4H28_10760 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility D K4H28_12970 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D K4H28_05615 ProQ/FinO family protein K03607 proQ; ProP effector D K4H28_12170 carbon starvation protein A K06200 cstA; carbon starvation protein D K4H28_07235 typA; translational GTPase TypA K06207 typA; GTP-binding protein D K4H28_04500 HPP family protein K07168 K07168; CBS domain-containing membrane protein D K4H28_10995 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D K4H28_08145 PhoH family protein K07175 phoH2; PhoH-like ATPase D K4H28_03200 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D K4H28_09185 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D K4H28_12895 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D K4H28_07155 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D K4H28_09885 peptidoglycan DD-metalloendopeptidase family protein K12943 ygeR; lipoprotein YgeR D K4H28_13395 cell envelope integrity protein CreD K06143 creD; inner membrane protein D K4H28_13230 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D K4H28_13245 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D K4H28_12555 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D K4H28_04960 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D K4H28_10735 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D K4H28_15810 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D K4H28_06780 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D K4H28_03335 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D K4H28_00770 hemin-degrading factor K07225 hmuS; putative hemin transport protein D K4H28_15755 iron-regulated protein K07231 K07231; putative iron-regulated protein B B 09194 Poorly characterized C 99996 General function prediction only D K4H28_05120 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D K4H28_15790 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D K4H28_07980 group II truncated hemoglobin K06886 glbN; hemoglobin D K4H28_15800 patatin-like phospholipase family protein K07001 K07001; NTE family protein D K4H28_06890 patatin-like phospholipase family protein K07001 K07001; NTE family protein D K4H28_08685 patatin-like phospholipase family protein K07001 K07001; NTE family protein D K4H28_13075 patatin-like phospholipase family protein K07001 K07001; NTE family protein D K4H28_00335 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D K4H28_00635 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D K4H28_07770 metal-dependent hydrolase K07038 K07038; inner membrane protein D K4H28_11080 YihY family inner membrane protein K07058 K07058; membrane protein D K4H28_06120 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D K4H28_08070 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D K4H28_11710 LemA family protein K03744 lemA; LemA protein D K4H28_13375 SlyX family protein K03745 slyX; SlyX protein D K4H28_09665 DUF494 domain-containing protein K03747 smg; Smg protein D K4H28_09285 lytic polysaccharide monooxygenase K03933 cpbD; chitin-binding protein D K4H28_06400 DedA family protein K03975 dedA; membrane-associated protein D K4H28_06145 DUF350 domain-containing protein K08989 K08989; putative membrane protein D K4H28_05460 hypothetical protein K09858 K09858; SEC-C motif domain protein D K4H28_13635 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D K4H28_11715 YgcG family protein K06872 K06872; uncharacterized protein D K4H28_09020 CoA-binding protein K06929 K06929; uncharacterized protein D K4H28_04125 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D K4H28_15040 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D K4H28_03360 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D K4H28_03675 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D K4H28_15635 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D K4H28_06080 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D K4H28_10850 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D K4H28_10505 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D K4H28_08380 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D K4H28_04955 cupin domain-containing protein K06995 K06995; uncharacterized protein D K4H28_05550 cupin domain-containing protein K06995 K06995; uncharacterized protein D K4H28_15320 hypothetical protein K07000 K07000; uncharacterized protein D K4H28_07715 lamin tail domain-containing protein K07004 K07004; uncharacterized protein D K4H28_07280 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D K4H28_14890 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein D K4H28_09310 VOC family protein K07032 K07032; uncharacterized protein D K4H28_03910 acetate uptake transporter K07034 K07034; uncharacterized protein D K4H28_07010 UPF0149 family protein K07039 K07039; uncharacterized protein D K4H28_15545 YecA family protein K07039 K07039; uncharacterized protein D K4H28_08065 zinc metallopeptidase K07054 K07054; uncharacterized protein D K4H28_03545 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D K4H28_15300 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D K4H28_16010 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D K4H28_10165 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D K4H28_09520 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D K4H28_03615 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D K4H28_10580 PhoX family phosphatase K07093 K07093; uncharacterized protein D K4H28_07500 YeeE/YedE family protein K07112 K07112; uncharacterized protein D K4H28_07505 YeeE/YedE family protein K07112 K07112; uncharacterized protein D K4H28_04970 SEL1-like repeat protein K07126 K07126; uncharacterized protein D K4H28_15740 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D K4H28_03090 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D K4H28_16615 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D K4H28_01770 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D K4H28_10725 DUF167 family protein K09131 K09131; uncharacterized protein D K4H28_08385 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D K4H28_14000 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein D K4H28_06895 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D K4H28_03275 YciI family protein K09780 K09780; uncharacterized protein D K4H28_08865 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D K4H28_00270 YbaN family protein K09790 K09790; uncharacterized protein D K4H28_07680 Trm112 family protein K09791 K09791; uncharacterized protein D K4H28_05260 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D K4H28_12540 DUF456 family protein K09793 K09793; uncharacterized protein D K4H28_00745 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D K4H28_05535 RnfH family protein K09801 K09801; uncharacterized protein D K4H28_00425 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D K4H28_12280 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D K4H28_03860 YceH family protein K09915 K09915; uncharacterized protein D K4H28_14215 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D K4H28_09030 DUF484 family protein K09921 K09921; uncharacterized protein D K4H28_10680 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D K4H28_07030 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D K4H28_08585 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D K4H28_09890 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D K4H28_04905 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein D K4H28_11985 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein D K4H28_06900 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D K4H28_14645 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D K4H28_13425 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024