+F	Repair protein	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; DNA Repair and Recombination Proteins - Drosophila yakuba</h2>
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A<b>Eukaryotic type</b>
B  SSBR (single strand breaks repair)
C    Direct repair
D      Dyak_GE24317 uncharacterized protein	K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4] 
D      Dyak_GE19152 uncharacterized protein	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] 
C    BER (base exicision repair)
D      DNA glycosylases
E        Dyak_GE14511 uncharacterized protein, isoform C	K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] 
E        Dyak_GE10117 uncharacterized protein	K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] 
E        Dyak_GE15798 uncharacterized protein	K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] 
E        Dyak_GE13013 uncharacterized protein	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] 
D      AP endonucleases
E        Dyak_GE29051 uncharacterized protein, isoform B	K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] 
D      Long Patch-BER factors
E        DNA polymerase delta complex
F          Dyak_GE23127 uncharacterized protein	K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] 
F          Dyak_GE28381 uncharacterized protein	K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] 
F          Dyak_GE21185 uncharacterized protein	K02328 POLD2; DNA polymerase delta subunit 2 
F          Dyak_GE19412 uncharacterized protein	K03504 POLD3; DNA polymerase delta subunit 3 
E        DNA polymerase epsilon complex
F          Dyak_GE10366 uncharacterized protein	K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] 
F          Dyak_GE20528 uncharacterized protein	K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] 
F          Dyak_GE18772 Dyak_Chrac-14; Chrac-14	K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] 
F          Dyak_GE14182 uncharacterized protein	K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] 
E        Dyak_GE12637 uncharacterized protein	K04802 PCNA; proliferating cell nuclear antigen 
E        Dyak_GE13815 Dyak_mus209; mus209	K04802 PCNA; proliferating cell nuclear antigen 
E        Dyak_GE14031 uncharacterized protein	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
D      Short Patch-BER factors
E        Dyak_GE16396 uncharacterized protein	K10803 XRCC1; DNA-repair protein XRCC1 
E        Dyak_GE24522 uncharacterized protein	K10776 LIG3; DNA ligase 3 [EC:6.5.1.1] 
D      Other BER factors
E        Dyak_GE18215 uncharacterized protein	K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] 
E        Dyak_GE25605 uncharacterized protein, isoform C	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE29197 uncharacterized protein	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE28076 uncharacterized protein	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE27392 uncharacterized protein, isoform B	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE26382 uncharacterized protein, isoform A	K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-] 
E        Dyak_GE24852 uncharacterized protein	K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] 
E        Dyak_GE17263 uncharacterized protein, isoform A	K10802 HMGB1; high mobility group protein B1 
E        Dyak_GE20224 uncharacterized protein, isoform A	K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30] 
C    NER (nucleotide excision repair)
D      GGR (global genome repair) factors
E        XPC-HR23B-CETN2 complex
F          Dyak_GE13643 uncharacterized protein, isoform C	K10838 XPC; xeroderma pigmentosum group C-complementing protein 
F          Dyak_GE14546 uncharacterized protein, isoform A	K10839 RAD23; UV excision repair protein RAD23 
F          Dyak_GE23445 uncharacterized protein	K10839 RAD23; UV excision repair protein RAD23 
E        Cul4-DDB2 complex
F          Dyak_GE16630 uncharacterized protein	K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] 
F          Dyak_GE21084 uncharacterized protein	K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] 
F          Dyak_GE17622 uncharacterized protein	K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] 
F          Dyak_GE23323 uncharacterized protein	K10609 CUL4; cullin 4 
F          Dyak_GE26244 uncharacterized protein	K10610 DDB1; DNA damage-binding protein 1 
E        NER4 complex
D      TCR (transcription coupled repair) factors
E        DNA-directed RNA polymerase II complex
F          Dyak_GE17292 Dyak_RpII215; RNA polymerase II 215kD subunit	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
F          Dyak_GE24221 uncharacterized protein	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
F          Dyak_GE18688 uncharacterized protein	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
F          Dyak_GE25222 uncharacterized protein, isoform B	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
F          Dyak_GE13062 uncharacterized protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
F          Dyak_GE25464 uncharacterized protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
F          Dyak_GE28893 uncharacterized protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
F          Dyak_GE26402 uncharacterized protein	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
F          Dyak_GE23031 uncharacterized protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
F          Dyak_GE19787 uncharacterized protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
F          Dyak_GE24228 uncharacterized protein	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
F          Dyak_GE23508 uncharacterized protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
F          Dyak_GE13140 uncharacterized protein	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
F          Dyak_GE12262 uncharacterized protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        Cul4-CSA complex
F          Dyak_GE16630 uncharacterized protein	K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] 
F          Dyak_GE21084 uncharacterized protein	K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] 
F          Dyak_GE17622 uncharacterized protein	K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] 
F          Dyak_GE23323 uncharacterized protein	K10609 CUL4; cullin 4 
F          Dyak_GE26244 uncharacterized protein	K10610 DDB1; DNA damage-binding protein 1 
E        Other TCR factor
F          Dyak_GE19761 uncharacterized protein	K25829 ELOF1; transcription elongation factor 1 
D      TFIIH complex
E        Dyak_GE21750 uncharacterized protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        Dyak_GE12176 uncharacterized protein	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        Dyak_GE13578 uncharacterized protein, isoform A	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        Dyak_GE22646 uncharacterized protein	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        Dyak_GE15755 uncharacterized protein	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        Dyak_GE22863 uncharacterized protein	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        Dyak_GE22864 uncharacterized protein	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        Dyak_GE18705 uncharacterized protein	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        Dyak_GE16821 uncharacterized protein	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        Dyak_GE23026 uncharacterized protein	K06634 CCNH; cyclin H 
E        Dyak_GE19794 uncharacterized protein	K06634 CCNH; cyclin H 
E        Dyak_GE13079 uncharacterized protein	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
D      RPA (replication factor A)
E        Dyak_GE24866 uncharacterized protein	K07466 RFA1; replication factor A1 
E        Dyak_GE13014 uncharacterized protein	K10739 RFA2; replication factor A2 
E        Dyak_GE17609 uncharacterized protein	K10740 RPA3; replication factor A3 
D      Other NER factors
E        Dyak_GE16873 uncharacterized protein	K10847 XPA; DNA-repair protein complementing XP-A cells 
E        Dyak_GE13614 uncharacterized protein, isoform A	K10849 ERCC1; DNA excision repair protein ERCC-1 
E        Dyak_GE16862 uncharacterized protein, isoform A	K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
E        Dyak_GE18773 uncharacterized protein	K10846 ERCC5; DNA excision repair protein ERCC-5 
E        Dyak_GE25455 uncharacterized protein, isoform A	K15075 MET18; DNA repair/transcription protein MET18/MMS19 
E        Dyak_GE19410 uncharacterized protein, isoform C	K03869 CUL3; cullin 3 
E        Dyak_GE10480 uncharacterized protein	K10612 CUL5; cullin 5 
E        Dyak_GE13845 Dyak_Elongin-C; Elongin-C, isoform A	K03872 ELOC; elongin-C 
E        Dyak_GE25062 uncharacterized protein	K03873 ELOB; elongin-B 
E        Dyak_GE10362 uncharacterized protein	K15076 ELOA; elongin-A 
E        Dyak_GE19171 uncharacterized protein	K26545 UBAP2; ubiquitin-associated protein 2 
C    MMR (mismatch excision repair)
D      Mismatch and loop recognition factors
E        Dyak_GE19033 uncharacterized protein	K08735 MSH2; DNA mismatch repair protein MSH2 
E        Dyak_GE19856 uncharacterized protein	K08737 MSH6; DNA mismatch repair protein MSH6 
D      MutL homologs
E        Dyak_GE19183 uncharacterized protein	K08734 MLH1; DNA mismatch repair protein MLH1 
E        Dyak_GE14157 uncharacterized protein	K10858 PMS2; DNA mismatch repair protein PMS2 
D      DNA polymerase delta complex
E        Dyak_GE23127 uncharacterized protein	K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] 
E        Dyak_GE28381 uncharacterized protein	K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] 
E        Dyak_GE21185 uncharacterized protein	K02328 POLD2; DNA polymerase delta subunit 2 
E        Dyak_GE19412 uncharacterized protein	K03504 POLD3; DNA polymerase delta subunit 3 
D      RPA (replication factor A)
E        Dyak_GE24866 uncharacterized protein	K07466 RFA1; replication factor A1 
E        Dyak_GE13014 uncharacterized protein	K10739 RFA2; replication factor A2 
E        Dyak_GE17609 uncharacterized protein	K10740 RPA3; replication factor A3 
D      RFC (replication factor C)
E        Dyak_GE25440 uncharacterized protein	K10754 RFC1; replication factor C subunit 1 
E        Dyak_GE20646 uncharacterized protein	K10755 RFC2_4; replication factor C subunit 2/4 
E        Dyak_GE15569 uncharacterized protein	K10755 RFC2_4; replication factor C subunit 2/4 
E        Dyak_GE12972 uncharacterized protein	K10756 RFC3_5; replication factor C subunit 3/5 
E        Dyak_GE18941 uncharacterized protein	K10756 RFC3_5; replication factor C subunit 3/5 
D      Other MMR factors
E        Dyak_GE12637 uncharacterized protein	K04802 PCNA; proliferating cell nuclear antigen 
E        Dyak_GE13815 Dyak_mus209; mus209	K04802 PCNA; proliferating cell nuclear antigen 
E        Dyak_GE12717 uncharacterized protein	K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
E        Dyak_GE17263 uncharacterized protein, isoform A	K10802 HMGB1; high mobility group protein B1 
B  DSBR (double strand breaks repair)
C    HR (homologous recombination)
D      MRN(MRX) complex
E        Dyak_GE18523 uncharacterized protein, isoform A	K10865 MRE11; double-strand break repair protein MRE11 
E        Dyak_GE14184 uncharacterized protein	K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] 
E        Dyak_GE21214 uncharacterized protein	K10867 NBN; nibrin 
D      BRCA1-core complex
D      BRCA1-A complex
D      BRCA1-B complex
E        Dyak_GE17103 uncharacterized protein	K10728 TOPBP1; topoisomerase (DNA) II binding protein 1 
D      BRCA1-C complex
E        Dyak_GE18523 uncharacterized protein, isoform A	K10865 MRE11; double-strand break repair protein MRE11 
E        Dyak_GE14184 uncharacterized protein	K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] 
E        Dyak_GE21214 uncharacterized protein	K10867 NBN; nibrin 
D      BRCA complex
E        Dyak_GE23416 uncharacterized protein	K04482 RAD51; DNA repair protein RAD51 
D      RecA family proteins
E        Dyak_GE23416 uncharacterized protein	K04482 RAD51; DNA repair protein RAD51 
E        Dyak_GE23723 uncharacterized protein	K10870 RAD51L2; RAD51-like protein 2 
E        Dyak_GE19263 uncharacterized protein	K10871 RAD51L3; RAD51-like protein 3 
E        Dyak_GE24233 uncharacterized protein	K10880 XRCC3; DNA-repair protein XRCC3 
D      Rad52 family proteins
D      Rad54 family proteins
E        Dyak_GE14966 uncharacterized protein	K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] 
E        Dyak_GE11484 uncharacterized protein, isoform B	K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-] 
D      RecQ family DNA helicases
E        Dyak_GE10090 uncharacterized protein	K10901 BLM; bloom syndrome protein [EC:5.6.2.4] 
E        Dyak_GE27708 uncharacterized protein	K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4] 
E        Dyak_GE20014 uncharacterized protein	K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4] 
D      Bloom's syndrome complex (BTR)
E        Dyak_GE10090 uncharacterized protein	K10901 BLM; bloom syndrome protein [EC:5.6.2.4] 
E        Dyak_GE13263 uncharacterized protein	K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] 
E        Dyak_GE16470 uncharacterized protein	K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] 
D      RPA (replication factor A)
E        Dyak_GE24866 uncharacterized protein	K07466 RFA1; replication factor A1 
E        Dyak_GE13014 uncharacterized protein	K10739 RFA2; replication factor A2 
E        Dyak_GE17609 uncharacterized protein	K10740 RPA3; replication factor A3 
D      Protein phosphatase 4
E        Dyak_GE15348 uncharacterized protein	K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] 
E        Dyak_GE17847 uncharacterized protein	K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2 
E        Dyak_GE26288 uncharacterized protein, isoform B	K17491 SMEK; protein phosphatase 4 regulatory subunit 3 
D      AP-5 complex
D      SMC5-SMC6 complex
E        Dyak_GE19773 uncharacterized protein	K22803 SMC5; structural maintenance of chromosomes protein 5 
E        Dyak_GE23268 uncharacterized protein	K22803 SMC5; structural maintenance of chromosomes protein 5 
E        Dyak_GE10818 uncharacterized protein	K22804 SMC6; structural maintenance of chromosomes protein 6 
E        Dyak_GE18416 uncharacterized protein	K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] 
E        Dyak_GE26335 uncharacterized protein	K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] 
E        Dyak_GE16038 Dyak_cerv; cervantes	K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] 
E        Dyak_GE25809 uncharacterized protein	K22823 NSMCE3; non-structural maintenance of chromosomes element 3 
E        Dyak_GE25812 Dyak_MAGE; MAGE	K22823 NSMCE3; non-structural maintenance of chromosomes element 3 
E        Dyak_GE18462 uncharacterized protein	K22825 NSMCE4; non-structural maintenance of chromosomes element 4 
D      Other HR factors
E        Dyak_GE12838 uncharacterized protein	K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] 
E        Dyak_GE24622 uncharacterized protein	K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1] 
E        Dyak_GE16651 uncharacterized protein	K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] 
E        Dyak_GE14384 uncharacterized protein	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        Dyak_GE22464 uncharacterized protein	K10991 SWI5; DNA repair protein Swi5/Sae3 
E        Dyak_GE14944 uncharacterized protein	K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] 
E        Dyak_GE25427 uncharacterized protein	K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] 
E        Dyak_GE20569 uncharacterized protein	K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] 
E        Dyak_GE11629 uncharacterized protein	K19026 SPG11; spatacsin 
E        Dyak_GE26094 uncharacterized protein	K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26 
E        Dyak_GE26393 uncharacterized protein	K11339 MORF4L1; mortality factor 4-like protein 1 
E        Dyak_GE27671 uncharacterized protein	K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] 
E        Dyak_GE23074 uncharacterized protein	K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] 
E        Dyak_GE14905 uncharacterized protein	K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] 
E        Dyak_GE25018 uncharacterized protein	K23112 BRAT1; BRCA1-associated ATM activator 1 
E        Dyak_GE15894 uncharacterized protein	K23456 CFAP410; cilla- and flagella-associated protein 
E        Dyak_GE20650 uncharacterized protein, isoform D	K23456 CFAP410; cilla- and flagella-associated protein 
E        Dyak_GE15283 uncharacterized protein	K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY 
E        Dyak_GE16713 uncharacterized protein	K26125 MMS22L; protein MMS22-like 
E        Dyak_GE20393 uncharacterized protein	K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2 
E        Dyak_GE25207 uncharacterized protein	K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-] 
C    NHEJ (non-homologous end-joining)
D      DNA-PK complex
E        Dyak_GE26092 uncharacterized protein, isoform A	K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 
E        Dyak_GE19388 uncharacterized protein	K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 
D      MRX complex
E        Dyak_GE18523 uncharacterized protein, isoform A	K10865 MRE11; double-strand break repair protein MRE11 
E        Dyak_GE14184 uncharacterized protein	K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] 
D      DNA Ligase 4 complex
E        Dyak_GE16147 uncharacterized protein	K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] 
D      X-family DNA polymerases
D      Other NHEJ factors
E        Dyak_GE25605 uncharacterized protein, isoform C	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE29197 uncharacterized protein	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE28076 uncharacterized protein	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE27392 uncharacterized protein, isoform B	K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
E        Dyak_GE26382 uncharacterized protein, isoform A	K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-] 
C    FA (Fanconi anemia) pathway
D      FA core complex
E        Dyak_GE24708 uncharacterized protein, isoform A	K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27] 
E        Dyak_GE11154 uncharacterized protein	K10896 FANCM; fanconi anemia group M protein 
E        Dyak_GE25739 uncharacterized protein	K10896 FANCM; fanconi anemia group M protein 
D      FA core complex binding factors
D      Bloom's syndrome complex (BTR)
E        Dyak_GE10090 uncharacterized protein	K10901 BLM; bloom syndrome protein [EC:5.6.2.4] 
E        Dyak_GE13263 uncharacterized protein	K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] 
E        Dyak_GE16470 uncharacterized protein	K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] 
D      FANCD2-I complex
E        Dyak_GE25040 uncharacterized protein, isoform A	K10891 FANCD2; fanconi anemia group D2 protein 
E        Dyak_GE22696 uncharacterized protein	K10895 FANCI; fanconi anemia group I protein 
D      Downstream FA components
D      Other FA pathway factors
E        Dyak_GE23416 uncharacterized protein	K04482 RAD51; DNA repair protein RAD51 
E        Dyak_GE23723 uncharacterized protein	K10870 RAD51L2; RAD51-like protein 2 
E        Dyak_GE23847 uncharacterized protein	K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12] 
E        Dyak_GE13034 uncharacterized protein	K15361 WDR48; WD repeat-containing protein 48 
C    Other DSBR factors
D      Protein phosphatase 6
E        Dyak_GE16465 uncharacterized protein	K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] 
E        Dyak_GE20499 uncharacterized protein	K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3 
D      Ubiquitin ligases
E        Dyak_GE17877 uncharacterized protein	K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26] 
D      Others
E        Dyak_GE18459 uncharacterized protein	K23314 WRAP53; telomerase Cajal body protein 1 
E        Dyak_GE14326 uncharacterized protein	K24752 WDR70; WD repeat-containing protein 70 
B  TLS (translesion DNA synthesis) factors
C    Y-family DNA polymerases
D      Dyak_GE19515 uncharacterized protein	K03509 POLH; DNA polymerase eta [EC:2.7.7.7] 
D      Dyak_GE29095 uncharacterized protein	K03509 POLH; DNA polymerase eta [EC:2.7.7.7] 
D      Dyak_GE25854 uncharacterized protein, isoform A	K03510 POLI; DNA polymerase iota [EC:2.7.7.7] 
D      Dyak_GE21096 uncharacterized protein	K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] 
C    B-family DNA polymerases
D      Dyak_GE19149 uncharacterized protein, isoform B	K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] 
C    A-family DNA polymerase
C    Rad6 epistasis group
D      Dyak_GE25319 uncharacterized protein	K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] 
D      Dyak_GE20564 Dyak_Uev1A; Uev1A	K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant 
D      Dyak_GE17114 uncharacterized protein	K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] 
D      Dyak_GE24917 uncharacterized protein	K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] 
C    Other TLS factors
D      Dyak_GE12637 uncharacterized protein	K04802 PCNA; proliferating cell nuclear antigen 
D      Dyak_GE13815 Dyak_mus209; mus209	K04802 PCNA; proliferating cell nuclear antigen 
D      Dyak_GE16043 uncharacterized protein	K24051 SPRTN; SprT-like domain-contaning protein Spartan 
D      Dyak_GE16507 uncharacterized protein	K26957 GCNA; germ cell nuclear acidic protein 
B  Check point factors
C    Rad9-Hus1-Rad1 complex
D      Dyak_GE22551 uncharacterized protein	K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] 
D      Dyak_GE25328 uncharacterized protein, isoform B	K10903 HUS1; HUS1 checkpoint protein 
D      Dyak_GE15082 uncharacterized protein	K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] 
C    HRAD17(Rad24)-RFC complex
D      Dyak_GE26434 uncharacterized protein	K06662 HRAD17; cell cycle checkpoint protein 
D      Dyak_GE20646 uncharacterized protein	K10755 RFC2_4; replication factor C subunit 2/4 
D      Dyak_GE15569 uncharacterized protein	K10755 RFC2_4; replication factor C subunit 2/4 
D      Dyak_GE12972 uncharacterized protein	K10756 RFC3_5; replication factor C subunit 3/5 
D      Dyak_GE18941 uncharacterized protein	K10756 RFC3_5; replication factor C subunit 3/5 
C    Rad17-Mec3-Ddc1 complex
D      Dyak_GE15082 uncharacterized protein	K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] 
C    FPC (fork protection complex)
D      Dyak_GE26249 uncharacterized protein	K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 
D      Dyak_GE13199 uncharacterized protein	K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 
D      Dyak_GE21439 uncharacterized protein	K25773 CLSPN; claspin 
C    Triple T complex
D      Dyak_GE24736 uncharacterized protein	K20403 TTI1; TELO2-interacting protein 1 
C    BAG6-UBL4A-GET4 complex
D      Dyak_GE21626 uncharacterized protein, isoform B	K23390 BAG6; large proline-rich protein BAG6 
D      Dyak_GE25235 uncharacterized protein	K23388 UBL4; ubiquitin-like protein 4 
D      Dyak_GE14745 uncharacterized protein	K23388 UBL4; ubiquitin-like protein 4 
D      Dyak_GE25354 uncharacterized protein	K23387 GET4; golgi to ER traffic protein 4 
C    Other check point factors
D      Dyak_GE17270 uncharacterized protein	K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] 
D      Dyak_GE26399 uncharacterized protein	K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] 
D      Dyak_GE12755 uncharacterized protein, isoform A	K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] 
D      Dyak_GE13292 uncharacterized protein, isoform B	K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] 
D      Dyak_GE10458 uncharacterized protein	K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48] 
D      Dyak_GE19338 Dyak_14-3-3zeta; 14-3-3zeta, isoform C	K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta 
D      Dyak_GE25525 uncharacterized protein, isoform B	K06630 YWHAE; 14-3-3 protein epsilon 
D      Dyak_GE13286 uncharacterized protein, isoform C	K19483 NAV2; neuron navigator 2 [EC:5.6.2.4] 
D      Dyak_GE18396 uncharacterized protein	K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] 
D      Dyak_GE15602 uncharacterized protein, isoform B	K17336 PLS3; plastin-3 
D      Dyak_GE25290 uncharacterized protein	K22422 DONSON; protein downstream neighbor of Son 
D      Dyak_GE12273 uncharacterized protein, isoform B	K22808 KANK; KN motif and ankyrin repeat domain-containing protein 
D      Dyak_GE17698 uncharacterized protein	K12196 VPS4; vacuolar protein-sorting-associated protein 4 
D      Dyak_GE17225 uncharacterized protein	K24778 ZFYVE19; abscission/NoCut checkpoint regulator 
D      Dyak_GE23440 uncharacterized protein	K25059 SDE2; replication stress response regulator SDE2 
B  Other factors with a suspected DNA repair function
C    DNA polymerases
D      Dyak_GE24491 uncharacterized protein	K02349 POLQ; DNA polymerase theta [EC:2.7.7.7] 
D      Dyak_GE16627 uncharacterized protein	K02331 POL5; DNA polymerase phi [EC:2.7.7.7] 
C    Nucleases
D      Dyak_GE18196 uncharacterized protein, isoform A	K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2] 
D      Dyak_GE10135 uncharacterized protein	K15340 DCLRE1A; DNA cross-link repair 1A protein 
D      Dyak_GE28461 uncharacterized protein	K21411 ANKLE1; ankyrin repeat and LEM domain-containing protein 1 
C    Helicases
D      Dyak_GE21661 uncharacterized protein	K19178 HELQ; POLQ-like helicase [EC:5.6.2.4] 
C    PSO4 complex
D      Dyak_GE13910 uncharacterized protein	K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] 
D      Dyak_GE21025 uncharacterized protein	K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 
D      Dyak_GE10530 uncharacterized protein	K12861 BCAS2; pre-mRNA-splicing factor SPF27 
D      Dyak_GE16491 uncharacterized protein	K12862 PLRG1; pleiotropic regulator 1 
C    Modulation of nucleotide pools
D      Dyak_GE24179 uncharacterized protein, isoform A	K17817 NUDT18; 8-oxo-dGDP phosphatase [EC:3.6.1.58] 
D      Dyak_GE18505 Dyak_UTPase; UTPase, isoform A	K01520 dut; dUTP diphosphatase [EC:3.6.1.23] 
D      Dyak_GE26085 uncharacterized protein	K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] 
D      Dyak_GE13485 uncharacterized protein	K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] 
#
A<b>Prokaryotic type</b>
B  SSBR (single strand breaks repair)
C    Direct repair
D      Dyak_GE19152 uncharacterized protein	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] 
C    BER (base exicision repair)
D      DNA glycosylases
E        Dyak_GE10117 uncharacterized protein	K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] 
E        Dyak_GE13013 uncharacterized protein	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] 
D      AP endonucleases
D      RecJ
D      DNA ligase
D      DNA polymerase I
C    NER (nucleotide excision repair)
D      GGR (global genome repair) factors
D      TCR (transcription coupled repair) factors
E        DNA-directed RNA polymerase complex (RNAP)
E        TRCF (transcription-repair coupling factor)
C    MMR (mismatch excision repair)
D      Mismatch and loop recognition factors
D      Molecular matchmaker
D      Strand discrimination factor
D      DNA exonucleases
D      DNA polymerase III holoenzyme
D      DNA ligase
D      Other MMR factors
E        Dyak_GE26330 uncharacterized protein	K03111 ssb; single-strand DNA-binding protein 
B  DSBR (double strand breaks repair)
C    HR (homologous recombination)
D      RecBC pathway proteins
D      RecFOR pathway proteins
D      AddAB pathway proteins
D      Other HR factor
D      Archaeal homologous recombinant proteins
C    NHEJ (non-homologous end-joining)
D      Two-component NHEJ DNA repair complex
D      SHIIR (short-homology-independent illegitimate recombination)
E        Facilitator
E        Supressor
D      SHDIR (short-homology-dependent illegitimate recombination)
E        RecET pathway
E        Facilitator
E        Supressor
B  TLS (translesion DNA synthesis) factors
C    Y-family DNA polymerases
C    Other SOS response factors
D      Dyak_GE26330 uncharacterized protein	K03111 ssb; single-strand DNA-binding protein 
B  Other factors with a suspected DNA repair function
C    DNA polymerase
C    DNA helicases
C    Modulation of nucleotide pools
D      Dyak_GE18505 Dyak_UTPase; UTPase, isoform A	K01520 dut; dUTP diphosphatase [EC:3.6.1.23] 
C    Others
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#Last updated: March 29, 2024