+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Endosymbiont of Acanthamoeba sp. UWC8

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D I862_01210 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C I862_01205 GTP-binding protein Era K03595 era; GTPase C I862_05710 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C I862_03340 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor C I862_00385 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor C I862_00910 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C I862_02880 transcription termination factor K03625 nusB; transcription antitermination protein NusB C I862_03580 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D I862_07080 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D I862_01920 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D I862_04705 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D I862_06825 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D I862_04100 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D I862_02985 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] C 23S rRNA modification factors D I862_02275 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D I862_02200 rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D I862_03700 ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D I862_05350 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D I862_04615 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D I862_01270 RNA-binding S4 domain-containing protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D I862_06425 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D I862_02685 pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C I862_00950 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] C I862_02475 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C I862_01210 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C I862_02560 ribonuclease Rne/Rng family protein K08300 rne; ribonuclease E [EC:3.1.26.12] C I862_01320 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C I862_01125 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C I862_01205 GTP-binding protein Era K03595 era; GTPase C I862_06675 GTP-binding protein Der K03977 engA; GTPase C I862_05710 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C I862_02925 putative yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C I862_03250 guanosine polyphosphate pyrophosphohydrolase/synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C I862_00895 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C I862_00915 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP C I862_04515 iojap family protein K09710 ybeB; ribosome-associated protein C I862_04675 hypothetical protein K07042 ybeY; probable rRNA maturation factor C I862_02575 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024