+E Transcription factors KO
#
Transcription Factors - Escherichia coli ABU 83972
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D ECABU_c22210 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D ECABU_c00700 araC; transcriptional regulator for ara operon K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D ECABU_c44120 rhaR; HTH-type transcriptional activator in L-rhamnose operon K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D ECABU_c44110 rhaS; L-rhamnose operon regulatory protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D ECABU_c19910 celD; CelD negative transcriptional regulator of cel operon K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D ECABU_c46690 adiY; AdiY transcriptional regulatory protein K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D ECABU_c27560 yfeG; ethanolamine operon regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D ECABU_c22400 ybtA; yersiniabactin transcriptional regulator YbtA K05372 ybtA; AraC family transcriptional regulator
D ECABU_c46040 soxS; regulation of superoxide response regulon K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECABU_c17570 marA; multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECABU_c50330 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECABU_c03960 ykgD; hypothetical transcriptional regulator YkgD K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D ECABU_c39540 gadW; transcriptional regulator GadW K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D ECABU_c39550 gadX; HTH-type transcriptional regulator GadX K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D ECABU_c46710 melR; MelR regulator of melibiose operon K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D ECABU_c20490 yeaM; hypothetical transcriptional regulator YeaM K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D ECABU_c25480 ada; Ada regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D ECABU_c30780 gcvA; positive regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D ECABU_c42550 ilvY; transcriptional activator protein IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D ECABU_c43100 metR; LysR-family transcriptional regulatory protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D ECABU_c00220 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D ECABU_c44740 oxyR; hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D ECABU_c31980 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D ECABU_c00820 leuO; transcriptional activator for leuABCD operon K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D ECABU_c35350 tdcA; transcriptional activator of tdc operon K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D ECABU_c05840 ybbS; hypothetical transcriptional regulator YbbS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D ECABU_c15560 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D ECABU_c22570 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D ECABU_c26840 dsdC; D-serine deaminase transcriptional activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D ECABU_c22560 nac; nitrogen assimilation control protein Nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D ECABU_c49640 yjiE; putative HTH-type transcriptional regulator YjiE K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D ECABU_c36520 aaeR; transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D ECABU_c34790 ttdR; HTH-type transcriptional activator TtdR K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D ECABU_c42470 hdfR; HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D ECABU_c16120 ycjZ; transcriptional regulator K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D ECABU_c08810 deoR; DeoR transcriptional repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D ECABU_c02910 putative DeoR-family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D ECABU_c38430 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D ECABU_c24200 gatR; galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D ECABU_c35440 agaR; transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D ECABU_c30750 fucR; positive regulator of the fuc operon K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D ECABU_c29770 srlR; regulator for gut (srl) K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D ECABU_c47490 ulaR; DNA-binding transcriptional dual regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D ECABU_c43790 transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D ECABU_c04350 lacI; lactose operon repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D ECABU_c24820 galS; GalS transcriptional repressor and galactose ultrainduction factor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECABU_c31350 galR; transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECABU_c40120 xylR; DNA-binding transcriptional activator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECABU_c42380 rbsR; regulator for rbs operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECABU_c45790 putative regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECABU_c44400 cytR; HTH-type transcriptional repressor K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ECABU_c00850 fruR; transcriptional regulator of the control of carbon and energy metabolism GalR/LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D ECABU_c48070 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D ECABU_c19120 purR; HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D ECABU_c38690 gntR; gluconate utilization system GNT-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D ECABU_c48290 idnR; L-idonate regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D ECABU_c34950 ebgR; HTH-type transcriptional regulator EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D ECABU_c18720 malI; maltose regulon regulatory protein MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D ECABU_c17640 transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D ECABU_c46560 phnF; transcriptional regulator of phosphonate uptake and biodegradation K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D ECABU_c14530 fadR; fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D ECABU_c01240 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D ECABU_c33790 glcC; glc operon transcriptional activator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D ECABU_c49610 uxuR; uxu operon transcriptional regulator UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D ECABU_c34190 transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D ECABU_c35130 exuR; negative regulator of exu regulon K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D ECABU_c40450 lldR; DNA-binding transcriptional repressor K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D ECABU_c41770 dgoR; transcriptional repressor for galactonate utilization GntR family K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D ECABU_c36340 nanR2; transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D ECABU_c33020 nanR1; transcriptional regulator, GntR family K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D ECABU_c29370 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D ECABU_c29270 csiR; gab operon transcriptional repressor CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D ECABU_c17710 ydfH; transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D ECABU_c49900 yjjM; predicted DNA-binding transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D ECABU_c04090 betI; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D ECABU_c05460 acrR; acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D ECABU_c40800 transcriptional regulator domain protein K05501 slmA; TetR/AcrR family transcriptional regulator
D ECABU_c10400 rutR; HTH-type transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D ECABU_c48720 transcriptional regulatory protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D ECABU_c19010 ydhM; hypothetical transcriptional regulator YdhM K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D ECABU_c32740 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D ECABU_c18700 uidR; UirR repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D ECABU_c36810 envR; potential acrEF/envCD operon repressor K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D ECABU_c13250 ycfQ; putative HTH-type transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D ECABU_c44780 fabR; fatty acid biosynthesis regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D ECABU_c08380 ybiH; putative HTH-type transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D ECABU_c08870 ybjK; putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D ECABU_c42280 asnC; regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D ECABU_c09300 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ECABU_c05300 ybaO; hypothetical transcriptional regulator YbaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D ECABU_c21760 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D ECABU_c03800 ykgK; hypothetical protein YkgK K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D ECABU_c22110 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D ECABU_c12550 csgD; csgAB operon transcriptional regulatory protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D ECABU_c39370 yhiF; hypothetical transcriptional regulator YhiF K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D ECABU_c49990 bglJ; transcriptional activator protein BglJ K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D ECABU_c38390 malT; MalT-maltotriose-ATP transcriptional activator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D ECABU_c39510 yhiE; DNA-binding transcriptional activator K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D ECABU_c17560 marR; multiple antibiotic resistance protein MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D ECABU_c18950 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D ECABU_c29500 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D ECABU_c48440 papX; HTH-type transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D ECABU_c12050 sfaX; HTH-type transcriptional regulator SfaX K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D ECABU_c32610 MarR-family transcriptional regulatory protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D ECABU_c03660 transcriptional regulator MarR family K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
C MerR family
D ECABU_c05720 cueR; copper efflux HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D ECABU_c37100 zntR; Zn(II)-responsive regulator of ZntA K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D ECABU_c46050 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D ECABU_c24560 yehV; putative transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D ECABU_c14220 ycgE; putative HTH-type transcriptional regulator with MerR domain K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D ECABU_c07360 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ECABU_c45700 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D ECABU_c45330 iclR; acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D ECABU_c05860 allR; repressor of allantoin and glyoxylate utilization operons K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D ECABU_c20860 kdgR; putative transcriptional repressor IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D ECABU_c40170 yiaJ; hypothetical transcriptional regulator YiaJ K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D ECABU_c37810 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D ECABU_c16170 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D ECABU_c24940 yeiL; putative transcriptional regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D ECABU_c28370 iscR; iscRSUA operon transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D ECABU_c47360 yjeB; putative transcriptional regulator YjeB K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
C XRE family
D ECABU_c16640 ydcN; putative HTH-type transcriptional regulator YdcN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D ECABU_c08590 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D ECABU_c46430 rpiR; transcriptional repressor of ribose catabolism RpiR/YebK family K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D ECABU_c21150 hexR; HTH-type transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D ECABU_c43190 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D ECABU_c44880 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ECABU_c36780 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D ECABU_c50300 trpR; DNA-binding transcriptional repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D ECABU_c04250 prpR; propionate catabolism operon regulatory protein K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D ECABU_c36020 sfsB; sugar fermentation stimulation Ner-like protein B K07724 ner; Ner family transcriptional regulator
D ECABU_c00770 yabN; putative ABC transporter periplasmic solute binding protein YabN K11925 sgrR; SgrR family transcriptional regulator
D ECABU_c50250 nadR; bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D ECABU_c45840 NadR transcriptional repressor / NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D ECABU_c17450 hipB; HTH-type transcriptional regulator HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D ECABU_c11390 hypothetical protein encoded by prophage K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECABU_c29850 putative HTH-type transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECABU_c35020 ygjM; putative HTH-type transcriptional regulator YgjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECABU_c29790 norR; anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D ECABU_c30020 fhlA; formate hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D ECABU_c01760 cdaR; carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D ECABU_c08000 modE; transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D ECABU_c30030 hypothetical protein K02019 modE; molybdate transport system regulatory protein
D ECABU_c38240 putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D ECABU_c39980 yiaG; putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D ECABU_c43930 hypothetical protein K07726 K07726; putative transcriptional regulator
D ECABU_c50270 putative bacterial regulatory protein K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D ECABU_c39110 nikR; nickel responsive transcriptional regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D ECABU_c44450 metJ; met regulon regulatory protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D ECABU_c10410 putA; bifunctional protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
D ECABU_c31120 putative transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECABU_c42050 bglG; transcriptional antiterminator of the bgl operon K03488 licT; beta-glucoside operon transcriptional antiterminator
C Others
D ECABU_c04400 frmR; repressor of frmRAB K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D ECABU_c24350 rcnR; transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D ECABU_c05150 bolA; BolA transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D ECABU_c43440 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D ECABU_c36460 argR; repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D ECABU_c48130 putative transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D ECABU_c07210 nagC; N-acetylglucosamine repressor NagC K02565 nagC; N-acetylglucosamine repressor
D ECABU_c17900 mlc; putative NAGC-like transcriptional regulator Mlc K15545 mlc; transcriptional regulator of PTS gene
D ECABU_c40380 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D ECABU_c16060 tyrR; transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D ECABU_c46870 cadC; transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D ECABU_c27910 gcvR; transcriptional regulation of gcv operon K03567 gcvR; glycine cleavage system transcriptional repressor
D ECABU_c15860 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D ECABU_c15890 pspC; phage shock protein C K03973 pspC; phage shock protein C
D ECABU_c14720 dhaR; PTS-dependent dihydroxyacetone kinase operon regulatory protein DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D ECABU_c06600 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D ECABU_c10580 possible prophage regulatory protein K07733 alpA; prophage regulatory protein
D ECABU_c03460 putative phage transcriptional AlpA-like regulator K07733 alpA; prophage regulatory protein
D ECABU_c40860 prophage regulatory protein AlpA family protein K07733 alpA; prophage regulatory protein
D ECABU_c49170 transcriptional regulator K07733 alpA; prophage regulatory protein
D ECABU_c41330 transcriptional regulator K07733 alpA; prophage regulatory protein
D ECABU_c23110 putative prophage regulatory protein K07733 alpA; prophage regulatory protein
D ECABU_c33180 putative regulatory protein K07733 alpA; prophage regulatory protein
D ECABU_c02700 alpA; prophage regulatory protein AlpA K07733 alpA; prophage regulatory protein
D ECABU_c32350 yqgE; protein YqgE K07735 algH; putative transcriptional regulator
D ECABU_c00390 caiF; transcriptional activatory protein CaiF K08277 caiF; transcriptional activator CaiF
D ECABU_c01600 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D ECABU_c04910 ybaD; putative regulatory protein K07738 nrdR; transcriptional repressor NrdR
D ECABU_c03410 crl; transcriptional regulator of cryptic csgA gene for curli surface fibers K11926 crl; sigma factor-binding protein Crl
D ECABU_c38420 rtcR; sigma-54 dependent transcriptional regulator RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D ECABU_c00860 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
D ECABU_c34300 ygiV; transcription activator effector binding domain/DNA gyrase inhibitor domain protein K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0