+E Transcription factors KO
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Transcription Factors - Peptoclostridium acidaminophilum
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D EAL2_c04870 scrFIBM; modification methylase ScrFIB K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EAL2_c04920 hphIAM; modification methylase HphIA K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EAL2_c04940 bspRIM; modification methylase BspRI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
D EAL2_808p00820 rbcR; RuBisCO transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D EAL2_c14220 ccpN; transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D EAL2_c14070 regA; HTH-type transcriptional regulator RegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EAL2_c09550 ccpA; glucose-resistance amylase regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D EAL2_c03420 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
C Lrp/AsnC family
D EAL2_808p01190 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D EAL2_808p07680 putative HTH-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D EAL2_808p02530 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
C Fur family
D EAL2_c12570 fur; ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D EAL2_808p03610 fur; Fur protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D EAL2_c02730 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D EAL2_808p04940 yagI; putative HTH-type transcriptional regulator YagI K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
C Rrf2 family
D EAL2_808p06390 cymR; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D EAL2_c12480 cymR; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D EAL2_808p05220 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D EAL2_808p05350 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D EAL2_c07130 ziaR; transcriptional repressor smtB K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D EAL2_c02470 sdpR; transcriptional repressor SdpR K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
D EAL2_808p06720 ydcN; putative HTH-type transcriptional regulator YdcN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D EAL2_c17930 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D EAL2_c05860 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D EAL2_c02090 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D EAL2_c19250 stc; signal-transduction and transcriptional-control protein Stc K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D EAL2_808p04820 acoR; acetoin dehydrogenase operon transcriptional activator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D EAL2_c15960 ygeV; putative sigma-54-dependent transcriptional regulator YgeV K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D EAL2_808p06990 stc2; signal-transduction and transcriptional-control protein Stc K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D EAL2_c17620 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D EAL2_c12450 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D EAL2_c13880 hypothetical protein K07727 K07727; putative transcriptional regulator
D EAL2_c05600 hypothetical protein K07727 K07727; putative transcriptional regulator
D EAL2_c06190 hypothetical protein K07727 K07727; putative transcriptional regulator
D EAL2_c10820 hypothetical protein K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D EAL2_c03980 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
C Others
D EAL2_c09820 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D EAL2_c17100 sugar diacid utilization regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D EAL2_808p07150 pucR; purine catabolism regulatory protein PucR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D EAL2_c01990 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D EAL2_c06580 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D EAL2_c21760 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D EAL2_c22200 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D EAL2_808p00080 integrating conjugative element K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D EAL2_808p00140 glpP; glycerol uptake operon antiterminator regulatory protein GlpP K02443 glpP; glycerol uptake operon antiterminator
D EAL2_c12060 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D EAL2_c14440 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D EAL2_c00370 tenI; regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D EAL2_c01190 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D EAL2_c14830 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D EAL2_c10540 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D EAL2_808p06060 hutP; Hut operon positive regulatory protein HutP K09683 hutP; hut operon positive regulatory protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0