+E Transcription factors KO #

  Transcription Factors - Peptoclostridium acidaminophilum

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D EAL2_c04870 scrFIBM; modification methylase ScrFIB K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EAL2_c04920 hphIAM; modification methylase HphIA K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EAL2_c04940 bspRIM; modification methylase BspRI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family D EAL2_808p00820 rbcR; RuBisCO transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D EAL2_c14220 ccpN; transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D EAL2_c14070 regA; HTH-type transcriptional regulator RegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EAL2_c09550 ccpA; glucose-resistance amylase regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family D EAL2_c03420 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator C TetR/AcrR family C Lrp/AsnC family D EAL2_808p01190 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D EAL2_808p07680 putative HTH-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D EAL2_808p02530 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility C MerR family C Fur family D EAL2_c12570 fur; ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D EAL2_808p03610 fur; Fur protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D EAL2_c02730 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family D EAL2_808p04940 yagI; putative HTH-type transcriptional regulator YagI K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family C Rrf2 family D EAL2_808p06390 cymR; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D EAL2_c12480 cymR; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D EAL2_808p05220 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D EAL2_808p05350 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D EAL2_c07130 ziaR; transcriptional repressor smtB K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D EAL2_c02470 sdpR; transcriptional repressor SdpR K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons C XRE family D EAL2_808p06720 ydcN; putative HTH-type transcriptional regulator YdcN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D EAL2_c17930 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D EAL2_c05860 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D EAL2_c02090 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D EAL2_c19250 stc; signal-transduction and transcriptional-control protein Stc K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D EAL2_808p04820 acoR; acetoin dehydrogenase operon transcriptional activator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D EAL2_c15960 ygeV; putative sigma-54-dependent transcriptional regulator YgeV K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D EAL2_808p06990 stc2; signal-transduction and transcriptional-control protein Stc K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D EAL2_c17620 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D EAL2_c12450 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D EAL2_c13880 hypothetical protein K07727 K07727; putative transcriptional regulator D EAL2_c05600 hypothetical protein K07727 K07727; putative transcriptional regulator D EAL2_c06190 hypothetical protein K07727 K07727; putative transcriptional regulator D EAL2_c10820 hypothetical protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D EAL2_c03980 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family C Others D EAL2_c09820 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D EAL2_c17100 sugar diacid utilization regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D EAL2_808p07150 pucR; purine catabolism regulatory protein PucR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D EAL2_c01990 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D EAL2_c06580 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EAL2_c21760 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EAL2_c22200 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EAL2_808p00080 integrating conjugative element K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EAL2_808p00140 glpP; glycerol uptake operon antiterminator regulatory protein GlpP K02443 glpP; glycerol uptake operon antiterminator D EAL2_c12060 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D EAL2_c14440 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D EAL2_c00370 tenI; regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D EAL2_c01190 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D EAL2_c14830 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D EAL2_c10540 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D EAL2_808p06060 hutP; Hut operon positive regulatory protein HutP K09683 hutP; hut operon positive regulatory protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024 #
Classification taken and modified from TRANSFAC 7.0