+E Transcription factors KO #

  Transcription Factors - Enterococcus avium

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D EH197_18030 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EH197_23675 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D EH197_07000 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D EH197_22995 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D EH197_11745 helix-turn-helix domain-containing protein K13652 K13652; AraC family transcriptional regulator D EH197_02615 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D EH197_07180 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D EH197_18210 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D EH197_05195 hypothetical protein K13653 K13653; AraC family transcriptional regulator D EH197_17285 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D EH197_17290 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D EH197_23165 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D EH197_02005 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D EH197_07190 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D EH197_05080 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D EH197_23435 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D EH197_02605 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D EH197_02515 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D EH197_02535 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D EH197_04855 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D EH197_16165 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D EH197_09615 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D EH197_09210 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D EH197_20035 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D EH197_19420 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D EH197_13310 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D EH197_11000 CBS domain-containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D EH197_18385 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_00835 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_22870 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_10205 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_10760 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_19985 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_12145 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_04830 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EH197_17155 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D EH197_13590 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D EH197_20075 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D EH197_00010 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D EH197_06405 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D EH197_05940 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D EH197_10765 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D EH197_03610 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D EH197_08290 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D EH197_09415 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D EH197_02540 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D EH197_10590 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D EH197_05740 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D EH197_10215 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D EH197_13480 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_20160 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_14630 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_03995 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_03080 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_20790 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_08790 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_23480 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D EH197_02430 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D EH197_18145 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator C TetR/AcrR family D EH197_01760 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D EH197_20800 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D EH197_23230 TetR/AcrR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity C Lrp/AsnC family D EH197_01940 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D EH197_17390 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D EH197_14610 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D EH197_01105 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA D EH197_20950 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator C MerR family D EH197_12935 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D EH197_06600 MerR family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D EH197_02735 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator C Fur family D EH197_14140 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D EH197_10880 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D EH197_15970 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family D EH197_12610 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D EH197_01045 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D EH197_07980 yeiL; transcriptional regulator YeiL K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D EH197_14690 cyclic nucleotide-binding domain-containing protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D EH197_06115 cyclic nucleotide-binding domain-containing protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D EH197_11110 cyclic nucleotide-binding domain-containing protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D EH197_07215 cyclic nucleotide-binding domain-containing protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator C Rrf2 family C ArsR family D EH197_08655 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D EH197_08670 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D EH197_10845 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D EH197_02885 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family D EH197_06735 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D EH197_19220 PadR family transcriptional regulator K26741 ladR; PadR family transcriptional regulator, multidrug transcriptional repressor LadR D EH197_06395 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D EH197_06615 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D EH197_07020 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D EH197_07290 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D EH197_22605 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D EH197_19035 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D EH197_03085 MurR/RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D EH197_12775 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D EH197_13400 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D EH197_00030 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D EH197_24065 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D EH197_15815 Rgg/GadR/MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator D EH197_09345 Rgg/GadR/MutR family transcriptional regulator K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator D EH197_07655 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D EH197_13525 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_02160 sigma-54-dependent transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_03215 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_00075 AAA family ATPase K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_08805 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_08840 AAA family ATPase K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_14665 sigma-54-dependent transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_03170 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_13615 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EH197_12840 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D EH197_10355 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D EH197_14350 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor D EH197_08345 transcriptional regulator K07727 K07727; putative transcriptional regulator D EH197_17250 transcriptional regulator K07729 K07729; putative transcriptional regulator D EH197_11020 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator D EH197_13050 transcriptional regulator K07729 K07729; putative transcriptional regulator D EH197_21505 transcriptional regulator K07729 K07729; putative transcriptional regulator D EH197_05995 transcriptional regulator K07729 K07729; putative transcriptional regulator D EH197_17320 transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D EH197_04635 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_08915 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_05725 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_21445 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_21720 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_05845 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_19215 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_02420 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EH197_23095 PRD domain-containing protein K03480 glcT; transcriptional antiterminator D EH197_19850 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator D EH197_00935 BglG family transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator D EH197_06675 transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator D EH197_02685 BglG family transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator D EH197_17525 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator D EH197_09095 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator D EH197_12640 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator D EH197_12765 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator D EH197_05215 HTH domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator D EH197_08550 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator C Others D EH197_04505 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D EH197_24205 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EH197_14925 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D EH197_04140 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D EH197_03430 PRD domain-containing protein K02531 lacT; transcriptional antiterminator D EH197_18340 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D EH197_19140 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D EH197_14080 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D EH197_13895 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D EH197_24090 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D EH197_06360 PspC domain-containing protein K03973 pspC; phage shock protein C D EH197_06370 PspC domain-containing protein K03973 pspC; phage shock protein C D EH197_10705 PspC domain-containing protein K03973 pspC; phage shock protein C D EH197_04965 PspC domain-containing protein K03973 pspC; phage shock protein C D EH197_13685 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator D EH197_05000 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D EH197_00965 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D EH197_15250 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D EH197_16030 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D EH197_19120 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0