+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Erwinia amylovora ATCC 49946

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ACRISPR-Cas system B Universal Cas proteins C EAM_0768 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 C EAM_0769 CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D EAM_0762 cas3; CRISPR-associated helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors D EAM_0763 CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA D EAM_0764 CRISPR-associated protein K19046 casB; CRISPR system Cascade subunit CasB D EAM_0765 CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC D EAM_0766 CRISPR-associated protein K19125 casD; CRISPR system Cascade subunit CasD D EAM_0767 CRISPR-associated protein K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases D EAM_3237 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D EAM_3406 modification methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D EAM_0280 putative DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D EAM_P224 DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D EAM_0060 putative modification methylase (cytosine-specific DNA methylase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EAM_2080 ecoRIIM; modification methylase EcoRII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C EAM_0862 putative type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C EAM_0863 putative DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C EAM_0061 putative restriction enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] C EAM_0062 mcrbc 5-methylcytosine restriction system component-like K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC C EAM_0864 putative type II restriction endonuclease K07448 mrr; restriction system protein C EAM_3033 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR D EAM_2756 conserved hypothetical protein (partial) K19048 symE; toxic protein SymE D EAM_2427 conserved hypothetical protein K19048 symE; toxic protein SymE D EAM_2761 conserved hypothetical protein (partial) K19048 symE; toxic protein SymE D EAM_2764 conserved hypothetical protein (partial) K19048 symE; toxic protein SymE D EAM_0801 conserved hypothetical protein K19048 symE; toxic protein SymE C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS D EAM_P237 pemK; putative toxin (plasmid stable inheritance protein) K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D EAM_P236 pemI; antitoxin K18842 chpS; antitoxin ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D EAM_0803 relE; toxin K06218 relE; mRNA interferase RelE/StbE D EAM_0802 relB; antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB C YafQ-dinJ C YoeB-YefM C HipA-HipB D EAM_P115 Putative transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB D EAM_1009 hha; haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein D EAM_1010 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB C PspC-PspB D EAM_1838 pspC; phage shock protein C K03973 pspC; phage shock protein C D EAM_1839 pspB; phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA C ParE-ParD C Doc-Phd D EAM_1738 kil; death on curing protein K07341 doc; death on curing protein D EAM_1737 phd; prevent host death protein K19165 phd; antitoxin Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D EAM_1428 conserved hypothetical protein K12148 bssS; biofilm regulator BssS D EAM_0703 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D EAM_3135 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D EAM_2965 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D EAM_2983 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D EAM_2382 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D EAM_3020 conserved hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D EAM_3021 conserved hypothetical protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins C CptA-CptB D EAM_2783 conserved hypothetical protein K19168 cptA; toxin CptA D EAM_2784 conserved hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C EAM_2492 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C EAM_3028 putative plasmid-related protein K19169 dndB; DNA sulfur modification protein DndB C EAM_3029 conserved hypothetical protein K19170 dndC; DNA sulfur modification protein DndC C EAM_3030 putative DNA-binding protein K19171 dndD; DNA sulfur modification protein DndD C EAM_3031 conserved hypothetical protein K19172 dndE; DNA sulfur modification protein DndE B DNA phosphorothioation-dependent restriction proteins C EAM_3036 conserved hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF C EAM_3035 conserved hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG C EAM_3034 conserved hypothetical protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023