+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Enterobacteriaceae bacterium bta3-1

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E F652_1646 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] E F652_2921 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] E F652_206 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E F652_3873 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1] E F652_3858 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E F652_3549 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] E F652_1823 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E F652_3931 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E F652_3583 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E F652_232 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E F652_3929 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E F652_3551 Transcription termination factor Rho K03628 rho; transcription termination factor Rho E F652_3497 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E F652_2668 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E F652_3816 croEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E F652_3866 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Others E F652_2114 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E F652_2532 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E F652_4229 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] E F652_4247 Carbon storage regulator K03563 csrA; carbon storage regulator E F652_2926 Putative lipoprotein K18765 csrD; RNase E specificity factor CsrD E F652_3509 Ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A E F652_2882 rrAb; Ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B E F652_2761 putative ATP-binding protein K06958 rapZ; RNase adapter protein RapZ E F652_1249 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] E F652_2526 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024