+E Replication protein KO
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DNA Replication Proteins - Escherichia coli B REL606
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D ECB_00207 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D ECB_03877 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D ECB_00392 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D ECB_01681 himA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D ECB_00916 himD; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D ECB_03585 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D ECB_03924 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ECB_04238 dnaC; DNA biosynthesis protein K02315 dnaC; DNA replication protein DnaC
D ECB_02936 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ECB_03931 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ECB_03522 Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E ECB_00182 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E ECB_03584 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E ECB_04125 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E ECB_00609 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E ECB_01095 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E ECB_00208 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E ECB_00421 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
E ECB_04247 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
E ECB_01813 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D RNase H
E ECB_00207 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E ECB_00181 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E ECB_03749 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E ECB_02311 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E ECB_03504 yicF; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E ECB_00207 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E ECB_00181 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
D ECB_01579 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
C DNA methylation enzymes
D ECB_00824 retron EC67 DNA adenine methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D ECB_03239 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D ECB_00644 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D ECB_02388 hda; DNA replication initiation factor K10763 hda; DnaA-homolog protein
B DNA Topoisomerases
C ECB_02157 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C ECB_03582 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C ECB_02891 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C ECB_02902 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C ECB_01250 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C ECB_01732 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022