+F Chromosome and associated proteins KO
#
Chromosome and Associated Proteins - Escherichia coli B REL606
%
!
AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E ECB_02461 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
#
AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
D ECB_01213 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D ECB_02525 stpA; DNA binding protein, nucleoid-associated K11685 stpA; DNA-binding protein StpA
C HU (heat unstable protein)
D ECB_03877 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D ECB_00392 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
D ECB_01681 himA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D ECB_00916 himD; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D ECB_01003 cbpA; curved DNA-binding protein, DnaJ-like protein K05516 cbpA; curved DNA-binding protein
D ECB_01002 yccD; modulator of CbpA co-chaperone K18997 cbpM; chaperone modulatory protein CbpM
D ECB_04272 rob; DNA-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECB_03585 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D ECB_03016 yraO; DnaA initiator-associating factor for replication initiation K12961 diaA; DnaA initiator-associating protein
D ECB_00970 yccV; DNA-binding protein, hemimethylated K11940 hspQ; heat shock protein HspQ
D ECB_00779 dps; DNA protection protein K04047 dps; starvation-inducible DNA-binding protein
D ECB_03119 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D ECB_04039 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D ECB_02747 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D ECB_00893 lrp; DNA-binding transcriptional dual regulator, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ECB_02116 yejK; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
B Chromosome partitioning proteins
C MukBEF complex
D ECB_00928 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB
D ECB_00927 mukE; condesin subunit E K03804 mukE; chromosome partition protein MukE
D ECB_00926 mukF; condesin subunit F K03633 mukF; chromosome partition protein MukF
C Condensin-like complex
C Divisome proteins
D ECB_00095 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D ECB_02598 ftsB; cell divison protein FtsB K05589 ftsB; cell division protein FtsB
D ECB_03312 ftsE; predicted transporter subunit: ATP-binding component of ABC superfamily K09812 ftsE; cell division transport system ATP-binding protein
D ECB_00085 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D ECB_00894 ftsK; DNA-binding membrane protein required for chromosome resolution and partitioning K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ECB_00084 ftsL; membrane bound cell division protein at septum containing leucine zipper motif K03586 ftsL; cell division protein FtsL
D ECB_03818 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D ECB_00094 ftsQ; membrane anchored protein K03589 ftsQ; cell division protein FtsQ
D ECB_00090 ftsW; integral membrane protein involved in stabilizing FstZ ring during cell division K03588 ftsW; cell division protein FtsW
D ECB_03311 ftsX; predicted transporter subunit: membrane component of ABC superfamily K09811 ftsX; cell division transport system permease protein
D ECB_00096 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ECB_02312 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D ECB_02742 ygfE; cytokinetic ring-localizing protein K09888 zapA; cell division protein ZapA
D ECB_03813 yiiU; hypothetical protein K09892 zapB; cell division protein ZapB
D ECB_00950 ycbW; hypothetical protein K18657 zapC; cell division protein ZapC
D ECB_00102 yacF; hypothetical protein K18778 zapD; cell division protein ZapD
D ECB_03092 yhcM; conserved hypothetical protein with nucleoside triphosphate hydrolase domain K06916 zapE; cell division protein ZapE
D ECB_04078 ytfB; predicted cell envelope opacity-associated protein K07269 ytfB; cell division protein YtfB
D ECB_02335 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ECB_02665 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ECB_04036 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ECB_00414 acrA; multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D ECB_01151 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D ECB_01150 minD; membrane ATPase of the MinC-MinD-MinE system K03609 minD; septum site-determining protein MinD
D ECB_01149 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ECB_00962 sulA; SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA
D ECB_03498 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
C Other chromosome partitioning proteins
D ECB_00644 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D ECB_03110 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D ECB_03109 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC
D ECB_03108 mreD; cell wall structural complex MreBCD transmembrane component MreD K03571 mreD; rod shape-determining protein MreD
D ECB_00603 mrdB; cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D ECB_02511 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ECB_02891 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D ECB_02902 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D ECB_03625 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ECB_03687 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D ECB_02726 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D ECB_02043 mrp; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D ECB_03212 fic; stationary-phase protein, cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ECB_03750 yihA; GTP-binding protein K03978 engB; GTP-binding protein
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024