+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Erigeron canadensis (horseweed)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        122608140 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        122594656 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        122596669 DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        122599669 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        122583794 DNA-directed RNA polymerases II, IV and V subunit 11-like	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        122596290 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        122602667 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        122582092 DNA-directed RNA polymerases IV and V subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        122584255 DNA-directed RNA polymerases IV and V subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        122582041 DNA-directed RNA polymerase II subunit RPB7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        122607695 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        122579327 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        122605068 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122582060 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122597273 DNA-directed RNA polymerase V subunit 5C-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122597724 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122598660 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122607033 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        122582481 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122608246 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122586463 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122600295 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        122593520 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        122578648 DNA-directed RNA polymerase IV subunit 1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        122590537 DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        122587019 DNA-directed RNA polymerases IV and V subunit 2-like	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        122600373 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        122601176 DNA-directed RNA polymerase IV subunit 7-like isoform X1	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        122607829 uncharacterized protein LOC122607829	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        122582262 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        122579412 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        122600467 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        122592344 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        122581602 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        122587495 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        122591350 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122605390 TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122580234 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122599993 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122609690 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        122611074 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        122588603 transcription initiation factor TFIID subunit 4b-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        122600974 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        122594223 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        122597799 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        122581735 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        122585330 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        122602848 transcription initiation factor TFIID subunit 3-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        122579486 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        122580522 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        122584715 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        122588870 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        122587463 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        122588844 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        122605066 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        122597832 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        122600308 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        122606983 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        122608640 transcription initiation factor TFIID subunit 12b isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        122581175 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        122596510 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        122592454 general transcription factor IIE subunit 2	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        122584998 uncharacterized protein LOC122584998	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        122585549 general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        122604323 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        122607121 transcription initiation factor IIF subunit beta-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        122585542 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        122579807 general transcription and DNA repair factor IIH subunit TFB1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        122581068 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        122579021 general transcription and DNA repair factor IIH subunit TFB4 isoform X1	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        122597947 general transcription and DNA repair factor IIH subunit TFB2 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        122578181 general transcription and DNA repair factor IIH helicase subunit XPB1-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        122611002 general transcription and DNA repair factor IIH helicase subunit XPB1-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        122608053 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        122598092 general transcription and DNA repair factor IIH subunit TFB5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        122607982 cyclin-dependent kinase D-3-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        122600671 uncharacterized protein LOC122600671	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        122593264 cyclin-H1-1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        122581951 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        122603860 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        122593631 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        122607873 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        122584681 mediator of RNA polymerase II transcription subunit 20a-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        122605327 mediator of RNA polymerase II transcription subunit 22a-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        122593431 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        122581911 mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        122600197 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        122578669 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        122581025 mediator of RNA polymerase II transcription subunit 21 isoform X1	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        122580441 mediator of RNA polymerase II transcription subunit 31 isoform X1	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        122599364 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        122584906 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        122594382 cyclin-C1-2-like	K15161 CCNC; cyclin-C 
E        122581829 cyclin-C1-2-like	K15161 CCNC; cyclin-C 
E        122600108 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        122611126 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        122579707 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        122598038 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        122595989 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        122593898 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        122606952 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        122595638 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        122606721 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        122603235 transcription-associated protein 1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        122595445 transcriptional adapter ADA2-like isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        122611074 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        122588603 transcription initiation factor TFIID subunit 4b-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        122600974 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        122594223 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        122597799 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        122581735 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        122585330 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        122587463 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        122588844 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        122605066 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        122606983 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        122608640 transcription initiation factor TFIID subunit 12b isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        122582121 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        122588576 SAGA-associated factor 29 homolog A	K11364 SGF29; SAGA-associated factor 29 
E        122596668 protein CHROMATIN REMODELING 5 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        122597736 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        122579646 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        122594345 ubiquitin C-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        122603189 splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
E        122598352 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        122598128 ATP-dependent helicase BRM-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        122580627 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        122578422 SWI/SNF complex subunit SWI3C isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        122592419 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        122586783 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        122588992 SWI/SNF complex subunit SWI3A isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        122589542 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        122603884 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        122607852 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        122591155 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        122580627 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        122584793 RNA polymerase II transcriptional coactivator KIWI-like isoform X1	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        122579055 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        122601891 protein SHORT ROOT IN SALT MEDIUM 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        122578673 protein SHORT ROOT IN SALT MEDIUM 1-like isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        122605413 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        122589122 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        122579548 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        122606817 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        122601358 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        122592372 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
E        122606842 transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        122591032 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        122600574 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        122604778 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        122594043 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        122592725 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        122588556 uncharacterized protein LOC122588556	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        122603814 serine/threonine-protein phosphatase PP1 isozyme 3-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122605019 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122592951 serine/threonine-protein phosphatase PP1 isozyme 2-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122581400 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122582627 serine/threonine-protein phosphatase PP1 isozyme 3-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122595708 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122586341 serine/threonine-protein phosphatase PP1 isozyme 3-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122586629 serine/threonine-protein phosphatase PP1 isozyme 3 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122599289 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        122606650 symplekin isoform X1	K06100 SYMPK; symplekin 
E        122606709 uncharacterized protein LOC122606709 isoform X1	K06100 SYMPK; symplekin 
E        122606338 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        122611171 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        122602342 NAD-capped RNA hydrolase DXO1	K14845 RAI1; RAT1-interacting protein 
E        122578720 regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        122603650 regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        122606885 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        122603583 peptidyl-prolyl cis-trans isomerase Pin1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        122580169 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        122607495 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        122578589 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        122586964 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        122579108 protein LEO1 homolog isoform X1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        122581416 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        122600511 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        122610158 uncharacterized protein LOC122610158	K15186 EAF; ELL-associated factor 
E        122578410 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        122578461 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        122599030 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
E        122599786 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        122578410 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        122578461 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        122599030 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
E        122599786 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        122600946 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        122592392 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        122594857 LOW QUALITY PROTEIN: la-related protein 6C	K15191 LARP7; La-related protein 7 
E        122581662 la-related protein 6B	K15191 LARP7; La-related protein 7 
E        122578410 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        122578461 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        122599030 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
E        122599786 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        122599052 TATA-binding protein-associated factor BTAF1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        122607314 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        122589067 protein Dr1 homolog isoform X1	K21751 DR1; down-regulator of transcription 1 
E        122605345 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        122595533 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        122601863 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        122605168 uncharacterized protein LOC122605168 isoform X1	K15193 SPTY2D1; protein SPT2 
E        122591314 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        122606728 RNA polymerase II C-terminal domain phosphatase-like 2	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        122604220 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        122597953 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        122610027 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        122585470 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        122603369 CTD nuclear envelope phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        122604758 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        122585355 CTD nuclear envelope phosphatase 1-like isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        122598381 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        122588260 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        122579261 protein IWS1 homolog 1-like	K17498 SPN1; transcription factor SPN1 
E        122610997 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        122609783 transcriptional elongation regulator MINIYO	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        122608504 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        122585529 RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        122590708 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        122578594 GPN-loop GTPase QQT2	K24104 GPN; GPN-loop GTPase 
E        122607366 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        122586590 GPN-loop GTPase QQT1	K24104 GPN; GPN-loop GTPase 
E        122588156 GPN-loop GTPase QQT1-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        122607667 DNA-directed RNA polymerase III subunit 1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        122584901 DNA-directed RNA polymerase III subunit 1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        122594443 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        122590975 DNA-directed RNA polymerases I and III subunit rpac1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        122582761 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        122604668 DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        122603180 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        122603828 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        122603491 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        122588670 DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        122578955 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        122600716 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        122585375 MATH and LRR domain-containing protein PFE0570w-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        122600283 protein PFC0760c-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        122608312 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        122579812 uncharacterized protein LOC122579812	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        122585104 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        122605068 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122582060 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122597273 DNA-directed RNA polymerase V subunit 5C-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122597724 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122598660 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122607033 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        122582481 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122608246 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122586463 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122600295 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        122593520 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        122595704 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        122599233 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        122591350 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122605390 TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122580234 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122599993 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122603473 transcription factor IIIB 60 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        122603482 transcription factor IIIB 60 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        122607950 plant-specific TFIIB-related protein PTF2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        122596221 uncharacterized protein LOC122596221	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        122607515 uncharacterized protein LOC122607515	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        122581903 uncharacterized protein LOC122581903	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        122582402 uncharacterized protein LOC122582402	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        122586788 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        122579041 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        122600816 uncharacterized protein LOC122600816	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        122579041 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        122586788 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        122602152 uncharacterized protein LOC122602152	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        122604052 snRNA-activating protein complex subunit-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        122584856 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        122606738 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        122593753 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        122590975 DNA-directed RNA polymerases I and III subunit rpac1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        122582761 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        122595664 DNA-directed RNA polymerase I subunit rpa49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        122597673 LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit rpa49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        122605235 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        122605699 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        122605068 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122582060 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122597273 DNA-directed RNA polymerase V subunit 5C-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122597724 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122598660 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        122607033 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        122582481 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122608246 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122586463 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        122600295 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        122593520 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        122591350 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122605390 TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122580234 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        122599993 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        122596371 high mobility group B protein 13-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        122579411 RNA polymerase I-specific transcription initiation factor rrn3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        122596237 upstream activation factor subunit spp27-like	K15223 UAF30; upstream activation factor subunit UAF30 
E        122589944 upstream activation factor subunit spp27-like	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        122579548 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        122606817 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        122601358 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        122599009 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        122584328 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        54108554 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        122584276 DNA-directed RNA polymerase subunit beta-like	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        122584616 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta-like	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        54108650 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        122584275 DNA-directed RNA polymerase subunit beta''	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        122584277 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta'-like	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        54108528 rpoC1; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        54108529 rpoC2; RNA polymerase beta'' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        122603061 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        122603913 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        122587478 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        122605172 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        122584410 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        122592344 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        122581602 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        122587495 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        122596510 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#<hr>
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#Last updated: April 9, 2024