+E Transcription factors KO
#
Transcription Factors - Enterococcus casseliflavus
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D ECBG_03021 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ECBG_03020 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D ECBG_01603 hypothetical protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D ECBG_00984 hypothetical protein K13653 K13653; AraC family transcriptional regulator
D ECBG_01338 methylated-DNA-[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D ECBG_00128 hypothetical protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D ECBG_01299 hypothetical protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D ECBG_01716 hypothetical protein K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
C DeoR family
D ECBG_02566 DeoR family transcriptional regulator, lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D ECBG_00843 DeoR family transcriptional regulator, fructose operon transcriptional repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D ECBG_01235 hypothetical protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D ECBG_02619 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_00358 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_02338 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_01363 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_01859 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_01480 LacI family sugar-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_00676 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_03034 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECBG_00329 hypothetical protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D ECBG_02101 hypothetical protein K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor
C GntR family
D ECBG_01549 hypothetical protein K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D ECBG_00379 hypothetical protein K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D ECBG_01190 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D ECBG_00525 hypothetical protein K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D ECBG_00161 hypothetical protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D ECBG_01293 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D ECBG_01297 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D ECBG_02909 hypothetical protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D ECBG_01650 hypothetical protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D ECBG_01686 hypothetical protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D ECBG_02657 hypothetical protein K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D ECBG_02809 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D ECBG_01349 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D ECBG_01595 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D ECBG_01563 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D ECBG_02879 hypothetical protein K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D ECBG_02647 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
C Lrp/AsnC family
D ECBG_00303 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D ECBG_01339 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D ECBG_00566 DNA-binding transcriptional repressor MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D ECBG_00045 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D ECBG_00603 hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D ECBG_03074 hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D ECBG_01810 transcriptional regulator FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ECBG_00709 fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D ECBG_01032 fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D ECBG_02091 IclR transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D ECBG_03144 hypothetical protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D ECBG_00332 hypothetical protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D ECBG_03120 hypothetical protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
C ArsR family
D ECBG_00704 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
D ECBG_01639 hypothetical protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
D ECBG_00188 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D ECBG_01198 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D ECBG_01106 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D ECBG_02854 iron dependent repressor, DNA binding protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D ECBG_03006 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ECBG_01216 hypothetical protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D ECBG_00552 transcriptional activator, Rgg/GadR/MutR family domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D ECBG_00422 transcriptional activator, Rgg/GadR/MutR family domain-containing protein K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D ECBG_00505 transcriptional activator, Rgg/GadR/MutR family domain-containing protein K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D ECBG_02975 pur operon repressor PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D ECBG_00021 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D ECBG_04254 redox-sensing transcriptional repressor rex 1 K01926 rex; redox-sensing transcriptional repressor
D ECBG_01961 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D ECBG_03019 hypothetical protein K07727 K07727; putative transcriptional regulator
D ECBG_00078 hypothetical protein K07729 K07729; putative transcriptional regulator
D ECBG_00094 hypothetical protein K07729 K07729; putative transcriptional regulator
D ECBG_00119 hypothetical protein K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D ECBG_00553 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_00600 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_03118 BglG family transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_00342 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_00448 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_01658 BglG family transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_00695 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECBG_02959 transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D ECBG_00320 hypothetical protein K03483 mtlR; mannitol operon transcriptional activator
D ECBG_02633 hypothetical protein K03491 licR; probable licABCH operon transcriptional regulator
D ECBG_02522 hypothetical protein K03491 licR; probable licABCH operon transcriptional regulator
D ECBG_03135 hypothetical protein K03491 licR; probable licABCH operon transcriptional regulator
C Others
D ECBG_00227 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D ECBG_00220 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D ECBG_01130 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ECBG_03146 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D ECBG_01866 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D ECBG_00655 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D ECBG_00804 heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D ECBG_02994 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D ECBG_00665 hypothetical protein K03973 pspC; phage shock protein C
D ECBG_02772 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator
D ECBG_02478 hypothetical protein K05346 deoR; deoxyribonucleoside regulator
D ECBG_00995 pyrR protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D ECBG_00875 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D ECBG_02827 protein MraZ K03925 mraZ; transcriptional regulator MraZ
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
#
Classification taken and modified from TRANSFAC 7.0