+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Escherichia coli 55989 (EAEC)

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D EC55989_2182 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E EC55989_2855 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Gypsy chromatin insulator complex C Other centrosome associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D EC55989_1332 hns; global nucleic acid-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS D EC55989_2937 stpA; DNA binding protein, nucleoid-associated K11685 stpA; DNA-binding protein StpA C HU (heat unstable protein) D EC55989_4485 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha D EC55989_0454 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D EC55989_1880 ihfA; integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha D EC55989_0957 ihfB; integration host factor (IHF), DNA-binding protein, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D EC55989_1110 cbpA; curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK K05516 cbpA; curved DNA-binding protein D EC55989_1109 cbpM; modulator of CbpA co-chaperone K18997 cbpM; chaperone modulatory protein CbpM D EC55989_5058 rob; DNA-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D EC55989_4171 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein D EC55989_3569 yraO; DnaA initiator-associating factor for replication initiation K12961 diaA; DnaA initiator-associating protein D EC55989_1015 yccV; DNA-binding protein, hemimethylated K11940 hspQ; heat shock protein HspQ D EC55989_0856 dps; Fe-binding and storage protein K04047 dps; starvation-inducible DNA-binding protein D EC55989_3675 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D EC55989_4727 hfq; HF-I, host factor for RNA phage Q beta replication K03666 hfq; host factor-I protein D EC55989_3203 argP; DNA-binding transcriptional activator, replication initiation inhibitor K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D EC55989_0934 lrp; DNA-binding transcriptional dual regulator, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D EC55989_2440 yejK; nucleotide associated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D EC55989_0970 mukB; fused chromosome partitioning protein: putative nucleotide hydrolase; conserved hypothetical protein; conserved protein K03632 mukB; chromosome partition protein MukB D EC55989_0969 mukE; protein involved in chromosome partitioning K03804 mukE; chromosome partition protein MukE D EC55989_0968 mukF; Involved in chromosome partioning, Ca2+ binding protein K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D EC55989_0090 ftsA; ATP-binding cell division protein involved in recruitment of FtsK to Z ring K03590 ftsA; cell division protein FtsA D EC55989_3020 ftsB; cell division protein K05589 ftsB; cell division protein FtsB D EC55989_3871 ftsE; transporter subunit: ATP-binding component of ABC superfamily K09812 ftsE; cell division transport system ATP-binding protein D EC55989_0080 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D EC55989_0935 ftsK; DNA-binding membrane protein required for chromosome resolution and partitioning K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D EC55989_0079 ftsL; membrane bound cell division protein at septum containing leucine zipper motif K03586 ftsL; cell division protein FtsL D EC55989_4411 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN D EC55989_0089 ftsQ; membrane anchored protein involved in growth of wall at septum K03589 ftsQ; cell division protein FtsQ D EC55989_0085 ftsW; integral membrane protein involved in stabilizing FstZ ring during cell division K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D EC55989_3870 ftsX; transporter subunit: membrane component of ABC superfamily K09811 ftsX; cell division transport system permease protein D EC55989_0091 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ D EC55989_2702 zipA; cell division protein involved in Z ring assembly K03528 zipA; cell division protein ZipA D EC55989_3198 zapA; protein that localizes to the cytokinetic ring K09888 zapA; cell division protein ZapA D EC55989_4406 yiiU; conserved hypothetical protein K09892 zapB; cell division protein ZapB D EC55989_0995 ycbW; conserved hypothetical protein K18657 zapC; cell division protein ZapC D EC55989_0096 yacF; conserved hypothetical protein K18778 zapD; cell division protein ZapD D EC55989_3645 yhcM; conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain K06916 zapE; cell division protein ZapE D EC55989_4766 ytfB; putative cell envelope opacity-associated protein K07269 ytfB; cell division protein YtfB D EC55989_2724 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EC55989_3093 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EC55989_4724 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EC55989_0476 acrA; multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D EC55989_1269 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC D EC55989_1268 minD; membrane ATPase of the MinC-MinD-MinE system K03609 minD; septum site-determining protein MinD D EC55989_1267 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D EC55989_1007 sulA; SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA D EC55989_4106 ttk; division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D EC55989_0674 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication D EC55989_3664 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins D EC55989_3663 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC D EC55989_3661 mreD; cell wall structural complex MreBCD transmembrane component MreD K03571 mreD; rod shape-determining protein MreD D EC55989_0626 mrdB; cell wall shape-determining protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D EC55989_3436 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D EC55989_3446 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D EC55989_4216 gidA; glucose-inhibited cell-division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D EC55989_4215 gidB; methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D EC55989_4285 xerC; site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC D EC55989_3180 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD D EC55989_2368 mrp; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D EC55989_3767 fic; stationary-phase protein, cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D EC55989_4912 Putative Filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D EC55989_4340 yihA; GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2025