+D GENES KO #

  KEGG Orthology (KO) - Escherichia coli APEC O78 (APEC)

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ecoa00010] D APECO78_15705 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO78_00925 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_12445 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO78_02130 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO78_00380 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_18390 fructose-1,6-bisphosphatase II-like protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_14195 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO78_18340 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO78_00350 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO78_10795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_12690 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_18345 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APECO78_07270 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_03425 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_21905 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APECO78_17510 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO78_12195 Pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_13085 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_12335 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO78_04010 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO78_04015 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_10620 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO78_11115 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO78_21765 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO78_02315 putative zinc-binding dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APECO78_05150 putative oxidoreductase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APECO78_15955 ethanol dehydrogenase EutG K04022 eutG; alcohol dehydrogenase D APECO78_21760 aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO78_00135 aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO78_07275 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO78_09000 glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D APECO78_00165 alpha-D-glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_12695 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D APECO78_20805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO78_12500 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_11415 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_17145 cryptic 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_18220 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_22475 cryptic phospho-beta-glucosidase B K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_15820 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO78_09465 PTS system glucose-specific transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO78_11915 bifunctional PTS system maltose and glucose-specific transporter subunits IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO78_17140 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:ecoa00020] D APECO78_07125 type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D APECO78_05185 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D APECO78_10250 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_04030 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_09640 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APECO78_07155 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APECO78_07160 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_07170 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO78_07165 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO78_07140 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_07145 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_07130 succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO78_07135 succinate dehydrogenase hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO78_01725 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_01720 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_01715 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D APECO78_01710 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D APECO78_01540 fumarate hydratase FumB K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO78_11865 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO78_11860 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APECO78_12190 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D APECO78_18385 DNA-binding transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO78_14885 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D APECO78_20805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO78_04010 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO78_04015 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO78_10620 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:ecoa00030] D APECO78_00925 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO78_13075 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APECO78_07330 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D APECO78_13880 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D APECO78_20720 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APECO78_16020 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO78_18410 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO78_03495 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D APECO78_16015 transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] D APECO78_18280 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D APECO78_01375 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D APECO78_03350 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D APECO78_22650 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D APECO78_03365 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO78_20690 putative mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_01395 ribose 1,5-bisphosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D APECO78_09910 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D APECO78_13070 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D APECO78_13065 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D APECO78_04060 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D APECO78_21575 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO78_02310 thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D APECO78_20975 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D APECO78_21420 ketodeoxygluconokinase KdgK K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D APECO78_14195 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO78_18340 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO78_02130 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO78_00380 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_18390 fructose-1,6-bisphosphatase II-like protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_12445 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ecoa00040] D APECO78_07355 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D APECO78_17825 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D APECO78_17820 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D APECO78_19265 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D APECO78_11350 altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D APECO78_19260 altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D APECO78_02750 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D APECO78_00595 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D APECO78_11705 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D APECO78_02755 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D APECO78_11495 oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D APECO78_11700 oxidoreductase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D APECO78_11895 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D APECO78_13875 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO78_10050 UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13940 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_21690 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D APECO78_21715 L-xylulose/3-keto-L-gulonate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D APECO78_01910 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO78_21720 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO78_01915 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO78_21725 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO78_01920 sgaE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO78_03755 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO78_21730 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO78_20720 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APECO78_03760 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D APECO78_03765 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D APECO78_21630 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D APECO78_21635 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D APECO78_00275 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D APECO78_00265 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D APECO78_02595 dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82] D APECO78_02600 putative dihydrodipicolinate synthetase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D APECO78_17630 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D APECO78_17635 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D APECO78_02570 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D APECO78_17620 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ecoa00051] D APECO78_05480 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO78_15565 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO78_11870 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APECO78_13920 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO78_13970 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO78_13925 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO78_13975 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO78_13995 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APECO78_13990 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APECO78_17630 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D APECO78_17635 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D APECO78_02570 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D APECO78_17620 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D APECO78_15060 2-keto-3-deoxy-L-rhamnonate aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D APECO78_00270 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D APECO78_00275 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D APECO78_00265 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D APECO78_13560 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_12445 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO78_02130 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO78_00380 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_18390 fructose-1,6-bisphosphatase II-like protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_21830 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D APECO78_00885 sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D APECO78_17090 sorbitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D APECO78_00860 putative L-sorbose 1-phosphate dehydrogenase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D APECO78_18395 dehydrogenase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D APECO78_14560 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D APECO78_21635 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D APECO78_14195 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO78_18340 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO78_00350 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO78_01345 D-allose kinase K00881 alsK; allose kinase [EC:2.7.1.55] D APECO78_01375 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D APECO78_01350 allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-] D APECO78_14555 PTS system fructose-specific transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO78_12885 PTS system mannose-specific transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO78_12890 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APECO78_12895 PTS system mannose-specific transporter subunit IID K02796 manZ; mannose PTS system EIID component D APECO78_18405 cmtB; PTS system mannitol-specific transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D APECO78_18400 mannitol-specific PTS system enzyme II component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO78_21825 PTS system mannitol-specific transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO78_15280 phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D APECO78_12465 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] D APECO78_17085 PTS system glucitol/sorbitol-specific transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D APECO78_17080 srlE; PTS system glucitol/sorbitol-specific transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D APECO78_17075 glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D APECO78_00880 sorbose-permease PTS system IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D APECO78_00875 sorbose-specific PTS system EIIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D APECO78_00870 PTS system mannose-specific transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component D APECO78_00865 sorbose permease IID component K02815 sorM; sorbose PTS system EIID component C 00052 Galactose metabolism [PATH:ecoa00052] D APECO78_00135 aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO78_07275 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO78_07280 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APECO78_07285 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D APECO78_07290 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APECO78_10050 UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13940 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_15705 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO78_05240 beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APECO78_19185 ebgA; cryptic beta-D-galactosidase subunit alpha K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D APECO78_19190 cryptic beta-D-galactosidase subunit beta K12112 ebgC; evolved beta-galactosidase subunit beta D APECO78_01525 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D APECO78_03760 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D APECO78_02620 PTS system IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO78_14180 PTS system galactitol-specific transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO78_02635 PTS system IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO78_14175 PTS system galactitol-specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO78_02630 PTS system IIC component K02775 gatC; galactitol PTS system EIIC component D APECO78_14170 PTS system galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component D APECO78_14165 galactitol-1-phosphate dehydrogenase K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251] D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_12445 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO78_14190 gatY; tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D APECO78_19530 tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D APECO78_14185 D-tagatose-1,6-bisphosphate aldolase subunit GatZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D APECO78_19495 tagatose 6-phosphate aldolase 1, kbaZ subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D APECO78_22320 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D APECO78_22330 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D APECO78_22325 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D APECO78_15570 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D APECO78_05520 maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D APECO78_19515 PTS system transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO78_19500 N-acetylgalactosamine-specific PTS system K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19505 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO78_19510 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO78_19520 N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.-] D APECO78_19525 agaS; tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] D APECO78_19535 PTS system N-acetylgalactosamine-specific transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19540 PTS system N-acetylgalactosamine-specific transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D APECO78_19545 N-acetylgalactosamine-specific PTS system K10986 agaD; galactosamine PTS system EIID component C 00053 Ascorbate and aldarate metabolism [PATH:ecoa00053] D APECO78_13875 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO78_11895 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D APECO78_02945 oxidoreductase K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414] D APECO78_01905 PTS system L-ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APECO78_01900 PTS system L-ascorbate-specific transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APECO78_01895 PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D APECO78_01890 L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] D APECO78_01910 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO78_21720 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO78_01915 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO78_21725 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO78_01920 sgaE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO78_03755 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO78_21730 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO78_21690 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D APECO78_21715 L-xylulose/3-keto-L-gulonate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D APECO78_17550 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D APECO78_19465 alpha-dehydro-beta-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D APECO78_19475 galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:ecoa00500] D APECO78_15570 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D APECO78_05520 maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D APECO78_10050 UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13940 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_14375 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D APECO78_21455 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APECO78_11425 PTS system cellobiose-specific transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO78_12510 N,N-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO78_11435 PTS system cellobiose-specific transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO78_12520 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO78_11430 PTS system cellobiose-specific transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APECO78_12515 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APECO78_12500 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_11415 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_17145 cryptic 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_18220 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_22475 cryptic phospho-beta-glucosidase B K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO78_20945 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D APECO78_20940 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D APECO78_20955 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D APECO78_20875 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO78_20935 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO78_20950 glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D APECO78_13425 cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D APECO78_21665 malS; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D APECO78_20870 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D APECO78_10460 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D APECO78_15820 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO78_11915 bifunctional PTS system maltose and glucose-specific transporter subunits IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO78_22275 PTS system alpha-glucoside-specific transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D APECO78_13285 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D APECO78_13290 trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D APECO78_09850 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APECO78_21385 cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APECO78_02170 PTS system trehalose(maltose)-specific transporter subunits IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APECO78_02165 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_15705 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO78_00925 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO78_05480 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO78_15565 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:ecoa00620] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO78_10620 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO78_04010 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO78_04015 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_08495 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO78_19405 Keto-acid formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO78_05275 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D APECO78_15965 aldehyde dehydrogenase EutE K04021 eutE; aldehyde dehydrogenase D APECO78_11115 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO78_21765 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_02315 putative zinc-binding dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APECO78_05150 putative oxidoreductase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APECO78_15955 ethanol dehydrogenase EutG K04022 eutG; alcohol dehydrogenase D APECO78_15300 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO78_15305 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APECO78_15980 phosphotransacetylase K04020 eutD; phosphotransacetylase D APECO78_12195 Pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_13085 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_04355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO78_20095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO78_20100 acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO78_15400 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO78_08830 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D APECO78_21760 aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D APECO78_01970 hypothetical protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO78_21870 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D APECO78_08130 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D APECO78_10635 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D APECO78_14380 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D APECO78_10790 aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D APECO78_12075 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D APECO78_04475 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D APECO78_08615 metal-binding enzyme K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D APECO78_13615 chaperone protein HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D APECO78_09135 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APECO78_21575 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO78_11120 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D APECO78_16010 bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO78_14885 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D APECO78_01540 fumarate hydratase FumB K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO78_11865 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO78_11860 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APECO78_12190 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D APECO78_18385 DNA-binding transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D APECO78_01725 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_01720 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_01715 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D APECO78_01710 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D APECO78_00570 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APECO78_20805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO78_12335 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO78_00815 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D APECO78_18635 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_03825 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ecoa00630] D APECO78_00820 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D APECO78_00815 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D APECO78_18635 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO78_07125 type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D APECO78_05185 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D APECO78_10250 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_04030 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_18295 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO78_18655 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D APECO78_18650 glcE; glycolate oxidase FAD binding subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D APECO78_18645 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D APECO78_12490 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6] D APECO78_09135 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APECO78_21575 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO78_20715 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D APECO78_00090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO78_16485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO78_18230 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO78_18240 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_18235 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APECO78_06030 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D APECO78_06035 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D APECO78_06040 tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APECO78_19460 tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APECO78_06065 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO78_19455 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO78_10790 aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D APECO78_17615 L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D APECO78_19115 tartrate dehydratase subunit alpha K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32] D APECO78_19120 L-tartrate dehydratase beta subunit K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32] D APECO78_12800 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D APECO78_13065 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D APECO78_00220 formate dehydrogenase-O major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO78_00225 formate dehydrogenase-O major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO78_00215 formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D APECO78_00210 formate dehydrogenase-O subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D APECO78_10030 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D APECO78_15620 oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] D APECO78_15625 formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] C 00640 Propanoate metabolism [PATH:ecoa00640] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO78_05195 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D APECO78_01970 hypothetical protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO78_15300 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO78_19410 propionate/acetate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15] D APECO78_15305 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_08495 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO78_19405 Keto-acid formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO78_20080 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_04355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO78_20095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO78_20100 acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO78_15400 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO78_10385 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_18305 methylmalonyl-CoA decarboxylase K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-] D APECO78_18295 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO78_18310 succinate CoA transferase K22214 scpC; propionyl-CoA:succinyl-CoA transferase [EC:2.8.3.27] D APECO78_07165 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO78_07170 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO78_05185 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D APECO78_05190 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D APECO78_10250 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_04030 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_05180 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D APECO78_00820 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D APECO78_08805 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D APECO78_18840 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D APECO78_00520 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APECO78_17615 L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:ecoa00650] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_10710 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_01975 hypothetical protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_14940 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO78_14945 acetyl-CoA:acetoacetyl-CoA transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D APECO78_12290 acetyl-CoA: acetoacetyl-CoA transferase subunit alpha/beta K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO78_05275 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D APECO78_12800 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D APECO78_07140 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_07145 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_07130 succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO78_07135 succinate dehydrogenase hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO78_01725 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_01720 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_01715 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D APECO78_01710 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D APECO78_11190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_21375 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_10385 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_16895 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO78_11375 succinate semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D APECO78_00150 NADH-dependent gamma-hydroxybutyrate dehydrogenase K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373] D APECO78_08495 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO78_19405 Keto-acid formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO78_10620 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO78_03840 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22210 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22685 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_03845 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22205 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22690 acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ecoa00660] D APECO78_03840 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22210 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22685 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_03845 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22205 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22690 acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APECO78_07165 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO78_07170 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO78_03815 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D APECO78_03810 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D APECO78_03820 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ecoa00562] D APECO78_16395 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APECO78_08890 phosphoanhydride phosphorylase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D APECO78_00350 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ecoa00190] D APECO78_15255 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D APECO78_15250 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D APECO78_15245 NADH:ubiquinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D APECO78_15240 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D APECO78_15235 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D APECO78_15230 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D APECO78_15225 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D APECO78_15220 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D APECO78_15215 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D APECO78_15210 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D APECO78_15205 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D APECO78_15200 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D APECO78_15195 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D APECO78_09505 respiratory NADH dehydrogenase 2/cupric reductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D APECO78_07140 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_07145 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_07130 succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO78_07135 succinate dehydrogenase hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO78_01725 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_01720 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_01715 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D APECO78_01710 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D APECO78_05650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D APECO78_05655 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D APECO78_05660 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D APECO78_05665 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D APECO78_05670 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D APECO78_07190 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO78_08875 cytochrome bd-II oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO78_07195 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APECO78_08880 cytochrome bd-II oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APECO78_07200 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D APECO78_08885 hypothetical protein K22501 appX; cytochrome bd-II ubiquinol oxidase subunit AppX [EC:7.1.1.7] D APECO78_22560 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D APECO78_22550 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D APECO78_22555 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D APECO78_22565 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D APECO78_22545 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D APECO78_22580 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APECO78_22570 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D APECO78_22575 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D APECO78_02105 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D APECO78_16230 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ecoa00710] D APECO78_18345 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APECO78_10795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_12690 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_14195 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO78_18340 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO78_02130 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO78_00380 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_18390 fructose-1,6-bisphosphatase II-like protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_16020 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO78_18410 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO78_18280 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D APECO78_01375 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D APECO78_20570 phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19] D APECO78_00350 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO78_20720 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APECO78_03495 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D APECO78_16015 transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] D APECO78_00570 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APECO78_20805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO78_16010 bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:ecoa00720] D APECO78_10620 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO78_12335 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO78_00570 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO78_01540 fumarate hydratase FumB K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO78_11865 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO78_11860 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APECO78_12190 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D APECO78_18385 DNA-binding transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D APECO78_07140 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_07145 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_07130 succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO78_07135 succinate dehydrogenase hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO78_01725 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_01720 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_01715 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D APECO78_01710 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D APECO78_07170 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO78_07165 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_09640 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APECO78_10250 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_04030 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO78_04355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO78_20095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO78_20100 acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO78_15400 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO78_18295 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO78_01310 formate dehydrogenase-H subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5] D APECO78_01315 formate dehydrogenase-H, selenopolypeptide subunit K22015 fdhF; formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5] D APECO78_06145 bifunctional 5,10-methylene-tetrahydrofolatedehydrogenase/5,10-methylene-tetrahydrofolatecyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D APECO78_00495 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D APECO78_15305 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APECO78_15300 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:ecoa00680] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_05295 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D APECO78_14485 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D APECO78_00220 formate dehydrogenase-O major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO78_00225 formate dehydrogenase-O major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO78_00215 formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D APECO78_00210 formate dehydrogenase-O subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D APECO78_01310 formate dehydrogenase-H subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5] D APECO78_01315 formate dehydrogenase-H, selenopolypeptide subunit K22015 fdhF; formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5] D APECO78_16485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO78_17510 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO78_00570 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO78_14195 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO78_18340 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO78_02130 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO78_00380 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_18390 fructose-1,6-bisphosphatase II-like protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_12445 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO78_08975 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO78_08970 trimethylamine N-oxide reductase cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D APECO78_08980 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO78_13180 NapC/NirT cytochrome c domain protein K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D APECO78_13175 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO78_15300 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO78_15305 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO78_12335 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO78_07270 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_03425 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_21905 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APECO78_18275 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO78_08515 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO78_03390 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ecoa00910] D APECO78_10000 nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO78_11065 nitrate/nitrite transport protein NarU K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO78_10005 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11060 nitrate reductase 2 (NRZ), alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10010 narH; nitrate reductase A subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11055 narY; nitrate reductase Z subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10020 Respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11045 cryptic nitrate reductase 2 subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO78_14860 nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D APECO78_14845 citrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D APECO78_20620 nitrite reductase subunit NirD K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D APECO78_20625 nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D APECO78_01265 cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D APECO78_08140 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D APECO78_12640 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APECO78_00090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO78_19905 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APECO78_19910 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D APECO78_05220 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D APECO78_05140 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_06100 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_18085 amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_04070 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D APECO78_05215 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ecoa00920] D APECO78_15855 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APECO78_00340 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APECO78_15850 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D APECO78_15845 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D APECO78_15840 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APECO78_05330 tauA; taurine transporter substrate binding subunit K15551 tauA; taurine transport system substrate-binding protein D APECO78_05340 taurine transporter subunit K15552 tauC; taurine transport system permease protein D APECO78_05335 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APECO78_05345 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D APECO78_08670 alkanesulfonate transporter subunit K15553 ssuA; sulfonate transport system substrate-binding protein D APECO78_08660 alkanesulfonate transporter permease K15554 ssuC; sulfonate transport system permease protein D APECO78_08655 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APECO78_08665 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D APECO78_08675 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D APECO78_17345 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO78_17350 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO78_17340 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D APECO78_02050 adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D APECO78_17420 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D APECO78_17430 cysJ; sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D APECO78_17425 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D APECO78_12165 thiosulfate reductase cytochrome B subunit K08354 phsC; thiosulfate reductase cytochrome b subunit D APECO78_16335 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APECO78_20910 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D APECO78_21880 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D APECO78_15805 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D APECO78_00810 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D APECO78_00480 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APECO78_08240 anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D APECO78_08245 anaerobic dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APECO78_08250 dimethyl sulfoxide reductase, anaerobic subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ecoa00061] D APECO78_04355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO78_20095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO78_20100 acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO78_15400 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO78_09430 hypothetical protein K02078 acpP; acyl carrier protein D APECO78_18675 hypothetical protein K02078 acpP; acyl carrier protein D APECO78_09125 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_09420 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_09415 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D APECO78_15435 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APECO78_09435 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APECO78_01985 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_09425 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_08760 hypothetical protein K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D APECO78_04330 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APECO78_10315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APECO78_12825 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ecoa00071] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_04545 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D APECO78_12825 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D APECO78_17790 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D APECO78_16440 phenylpropionate dioxygenase ferredoxin reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO78_11115 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO78_21765 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:ecoa00074] D APECO78_16550 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D APECO78_06490 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D APECO78_09430 hypothetical protein K02078 acpP; acyl carrier protein D APECO78_18675 hypothetical protein K02078 acpP; acyl carrier protein D APECO78_09125 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_09420 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:ecoa00121] D APECO78_11905 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ecoa00561] D APECO78_06065 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO78_19455 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO78_05150 putative oxidoreductase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APECO78_09865 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D APECO78_09860 dihydroxyacetone kinase subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D APECO78_09855 dihydroxyacetone kinase subunit M K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D APECO78_00520 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APECO78_00385 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APECO78_01025 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APECO78_09410 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D APECO78_19105 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APECO78_18870 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D APECO78_01030 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D APECO78_01525 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:ecoa00564] D APECO78_21885 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D APECO78_15040 sn-glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D APECO78_20915 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D APECO78_15045 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D APECO78_15050 glpC; sn-glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D APECO78_01025 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APECO78_19105 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APECO78_18870 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D APECO78_01030 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D APECO78_22935 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D APECO78_22955 lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5] D APECO78_15030 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D APECO78_21015 ugpQ; cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D APECO78_17790 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D APECO78_15945 eutA; reactivating factor for ethanolamine ammonia lyase K04019 eutA; ethanolamine utilization protein EutA D APECO78_15935 ethanolamine ammonia-lyase, large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D APECO78_15930 ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D APECO78_00345 CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D APECO78_04305 CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D APECO78_10755 putative CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D APECO78_16670 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D APECO78_01745 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D APECO78_13340 phosphatidylglycerophosphate synthetase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D APECO78_05600 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D APECO78_10260 phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D APECO78_16530 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D APECO78_07615 cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D APECO78_10105 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D APECO78_09200 Putative synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:ecoa00565] D APECO78_22935 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:ecoa00600] D APECO78_05240 beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APECO78_01525 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism D APECO78_22935 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D APECO78_22935 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:ecoa00592] D APECO78_22935 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:ecoa01040] D APECO78_05990 esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D APECO78_05785 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D APECO78_10130 acyl-CoA esterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ecoa00230] D APECO78_18990 ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D APECO78_20775 adenosine nucleotide hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D APECO78_03365 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO78_20690 putative mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_09910 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D APECO78_15380 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D APECO78_00790 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D APECO78_16225 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D APECO78_13060 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D APECO78_16515 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D APECO78_16220 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D APECO78_06110 N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D APECO78_06115 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D APECO78_16090 phosphoribosylaminoimidazole-succinocarboxamide K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D APECO78_09615 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D APECO78_00795 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APECO78_05865 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D APECO78_05920 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APECO78_17310 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APECO78_06915 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APECO78_20785 GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D APECO78_05905 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D APECO78_15765 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO78_03370 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO78_05460 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D APECO78_16695 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D APECO78_04065 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D APECO78_16270 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D APECO78_16320 mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APECO78_03420 inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D APECO78_18505 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D APECO78_04620 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D APECO78_18045 xanthine dehydrogenase subunit XdhA K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D APECO78_18050 xanthine dehydrogenase subunit XdhB K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D APECO78_18055 xanthine dehydrogenase iron-sulfur-binding subunit K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit D APECO78_04950 oxidoreductase with molybdenum-binding domain K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D APECO78_04955 oxidoreductase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D APECO78_04960 aldehyde oxidoreductase 2Fe-2S subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D APECO78_16265 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D APECO78_03965 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D APECO78_18130 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D APECO78_22080 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D APECO78_15000 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO78_16965 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO78_15005 putative ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO78_16970 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO78_02160 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D APECO78_04240 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D APECO78_15270 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D APECO78_03040 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_04665 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_06200 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_14760 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_22090 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D APECO78_16235 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D APECO78_22735 guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D APECO78_17535 (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D APECO78_22860 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D APECO78_01815 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D APECO78_11925 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D APECO78_13720 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D APECO78_17595 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D APECO78_22175 cryptic adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D APECO78_02045 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D APECO78_05890 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D APECO78_17520 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO78_18980 cyclic 3',5'-adenosine monophosphate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D APECO78_03705 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D APECO78_17340 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D APECO78_17345 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO78_17350 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO78_13630 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D APECO78_06055 allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D APECO78_06075 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D APECO78_06070 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D APECO78_06020 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D APECO78_06080 ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350] D APECO78_05140 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_06100 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_18085 amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:ecoa00240] D APECO78_03625 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APECO78_03620 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APECO78_02195 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D APECO78_02190 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D APECO78_09275 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D APECO78_08715 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D APECO78_22045 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D APECO78_10275 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D APECO78_04285 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D APECO78_16320 mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APECO78_17520 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO78_20050 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D APECO78_19230 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D APECO78_17515 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D APECO78_08530 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D APECO78_12630 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D APECO78_14060 Uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D APECO78_05920 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APECO78_17310 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APECO78_06915 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APECO78_03015 dUMP phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D APECO78_22985 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D APECO78_05460 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D APECO78_16215 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D APECO78_02045 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D APECO78_14550 pseudouridine kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83] D APECO78_14545 hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D APECO78_14530 rihB; ribonucleoside hydrolase 2 K10213 rihB; ribosylpyrimidine nucleosidase [EC:3.2.2.8] D APECO78_06845 rihA; ribonucleoside hydrolase 1 K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D APECO78_03610 ribonucleoside hydrolase RihC K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-] D APECO78_17595 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D APECO78_14430 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D APECO78_05205 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D APECO78_02160 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D APECO78_14055 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D APECO78_15000 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO78_16965 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO78_15005 putative ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO78_16970 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO78_15270 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D APECO78_03040 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_04665 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_06200 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_14760 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO78_09450 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D APECO78_22030 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D APECO78_03355 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D APECO78_10060 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D APECO78_17740 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APECO78_14445 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D APECO78_14450 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D APECO78_18080 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO78_09050 monooxygenase of the alternative pyrimidine degradation pathway K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D APECO78_09025 putative oxidoreductase, flavin:NADH component K09024 rutF; flavin reductase [EC:1.5.1.-] D APECO78_09045 synthetase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D APECO78_09040 hypothetical protein K09021 rutC; aminoacrylate peracid reductase D APECO78_09035 enzyme of the alternative pyrimidine degradation pathway K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-] D APECO78_11480 3-hydroxy acid dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D APECO78_09030 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ecoa00250] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_16610 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D APECO78_12670 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO78_18520 ansB; L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO78_07810 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APECO78_22610 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D APECO78_06905 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D APECO78_04535 C-N hydrolase family amidase K13566 NIT2; omega-amidase [EC:3.5.1.3] D APECO78_15265 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO78_01635 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D APECO78_19700 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APECO78_00590 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APECO78_01815 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D APECO78_09615 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D APECO78_02195 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D APECO78_02190 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D APECO78_11190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_21375 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_10385 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_16895 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO78_11375 succinate semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D APECO78_19905 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APECO78_19910 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D APECO78_12640 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APECO78_09060 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APECO78_00090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO78_03625 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APECO78_03620 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APECO78_05945 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_11370 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_18945 hypothetical protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO78_22535 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO78_15380 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ecoa00260] D APECO78_00920 aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO78_03465 bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO78_00485 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO78_20960 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO78_03470 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D APECO78_03475 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D APECO78_08125 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D APECO78_16485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO78_09135 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APECO78_21575 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO78_06065 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO78_19455 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO78_07270 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_03425 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_21905 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APECO78_18275 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO78_08515 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO78_03390 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D APECO78_11480 3-hydroxy acid dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D APECO78_21930 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D APECO78_21925 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D APECO78_10665 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APECO78_18230 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO78_18240 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_18235 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APECO78_16670 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D APECO78_05080 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D APECO78_05085 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D APECO78_12870 L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO78_17605 L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO78_19395 L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO78_19420 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO78_22705 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO78_15585 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D APECO78_17810 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO78_10165 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D APECO78_10170 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ecoa00270] D APECO78_21880 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D APECO78_15805 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D APECO78_18825 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO78_11920 bifunctional beta-cystathionase/maltose regulon regulatory protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO78_00840 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APECO78_22975 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APECO78_18445 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO78_04040 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D APECO78_04045 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APECO78_04235 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D APECO78_02560 mtnK; methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D APECO78_16695 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D APECO78_02565 putative translation initiation factor subunit protein K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D APECO78_01180 tyrosine aminotransferase TyrB, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO78_12965 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D APECO78_02525 methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_13590 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_17020 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APECO78_00920 aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO78_03465 bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO78_00485 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO78_20960 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO78_03470 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D APECO78_00810 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D APECO78_00480 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APECO78_22695 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO78_17025 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D APECO78_18470 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_16335 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APECO78_17810 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO78_13380 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D APECO78_19995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO78_12870 L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO78_17605 L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO78_19395 L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO78_15835 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D APECO78_18275 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO78_08515 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ecoa00280] D APECO78_22695 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_18295 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ecoa00290] D APECO78_19420 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO78_22705 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO78_03815 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D APECO78_03810 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D APECO78_03820 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D APECO78_03840 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22210 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22685 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_03845 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22205 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22690 acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APECO78_22715 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D APECO78_22700 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D APECO78_22695 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO78_21670 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D APECO78_15265 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO78_03825 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ecoa00300] D APECO78_00920 aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO78_03465 bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO78_00485 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO78_20960 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO78_16105 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO78_03615 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D APECO78_04260 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D APECO78_20590 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APECO78_16055 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D APECO78_22880 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APECO78_17800 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D APECO78_03875 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APECO78_03880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ecoa00310] D APECO78_07160 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17810 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO78_01590 lysine decarboxylase CadA K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D APECO78_04360 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D APECO78_19170 putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APECO78_10935 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_16895 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO78_16885 carbon starvation induced protein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D APECO78_16890 hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D APECO78_10825 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D APECO78_12255 FAD-linked oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D APECO78_14940 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO78_14945 acetyl-CoA:acetoacetyl-CoA transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00220 Arginine biosynthesis [PATH:ecoa00220] D APECO78_02240 ornithine carbamoyltransferase subunit I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D APECO78_19700 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APECO78_00590 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APECO78_05945 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_11370 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_00090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO78_03625 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APECO78_03620 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APECO78_05140 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_06100 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_18085 amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO78_12640 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_15265 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO78_17695 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D APECO78_00585 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D APECO78_00580 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D APECO78_20590 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APECO78_00575 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ecoa00330] D APECO78_05205 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D APECO78_01510 arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D APECO78_18430 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D APECO78_18420 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D APECO78_06995 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO78_18565 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO78_04045 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APECO78_04040 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D APECO78_19170 putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APECO78_10935 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APECO78_11720 spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D APECO78_12565 arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D APECO78_12555 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D APECO78_12570 bifunctional succinylornithine transaminase/acetylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D APECO78_12560 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D APECO78_12550 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D APECO78_10360 glutamate--putrescine ligase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D APECO78_10380 gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D APECO78_10375 gamma-glutamyl-gamma-aminobutyraldehydedehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D APECO78_10365 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D APECO78_05435 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D APECO78_09060 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APECO78_04640 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D APECO78_04645 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:ecoa00340] D APECO78_13830 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D APECO78_13865 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D APECO78_13855 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino imidazole-4-carboxamide isomerase] K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D APECO78_13850 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D APECO78_13860 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D APECO78_13845 histidine biosynthesis bifunctional protein K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D APECO78_13840 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO78_13835 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:ecoa00350] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_13840 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO78_01180 tyrosine aminotransferase TyrB, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO78_10665 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APECO78_10660 phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO78_11115 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO78_21765 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO78_02880 4-hydroxyphenylacetic hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D APECO78_02875 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D APECO78_02910 Homoprotocatechuate dyoxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D APECO78_02915 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D APECO78_02905 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D APECO78_02920 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D APECO78_02900 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D APECO78_02895 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D APECO78_16895 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO78_07675 dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] C 00360 Phenylalanine metabolism [PATH:ecoa00360] D APECO78_10665 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APECO78_10660 phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D APECO78_10725 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D APECO78_10715 thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D APECO78_10675 paaA; phenylacetate-CoA oxygenase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D APECO78_10680 paaB; phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D APECO78_10685 putative multicomponent oxygenase/reductase subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D APECO78_10690 multicomponent oxygenase/reductase subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D APECO78_10695 subunit of the phenylacetly-CoA oxygenase/reductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D APECO78_10705 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D APECO78_10670 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D APECO78_10720 beta-ketoadipyl CoA thiolase K02615 paaJ; 3-oxo-5,6-didehydrosuberyl-CoA/3-oxoadipyl-CoA thiolase [EC:2.3.1.223 2.3.1.174] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_10710 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_13840 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO78_01180 tyrosine aminotransferase TyrB, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO78_20995 acetyltransferase YhhY K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D APECO78_09810 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D APECO78_07675 dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] D APECO78_00500 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] D APECO78_16420 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha K05708 hcaE; 3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19] D APECO78_16425 3-phenylpropionate dioxygenase subunit beta K05709 hcaF; 3-phenylpropionate/trans-cinnamate dioxygenase subunit beta [EC:1.14.12.19] D APECO78_16430 3-phenylpropionate dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D APECO78_16440 phenylpropionate dioxygenase ferredoxin reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D APECO78_16435 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase K05711 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase [EC:1.3.1.87] D APECO78_05255 3-(3-hydroxyphenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D APECO78_05260 mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D APECO78_05265 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D APECO78_05270 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D APECO78_05280 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D APECO78_05275 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:ecoa00380] D APECO78_07160 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_22410 tryptophanase/L-cysteine desulfhydrase, PLP-dependent K01667 tnaA; tryptophanase [EC:4.1.99.1] D APECO78_12490 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6] D APECO78_00500 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ecoa00400] D APECO78_07265 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO78_12345 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO78_16725 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO78_20735 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D APECO78_12285 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D APECO78_20195 dehydroshikimate reductase, NAD(P)-binding protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D APECO78_12280 putative oxidoreductase K05887 ydiB; quinate/shikimate dehydrogenase [EC:1.1.1.282] D APECO78_05445 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D APECO78_20740 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D APECO78_08520 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D APECO78_15465 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D APECO78_10185 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D APECO78_10180 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] D APECO78_10175 fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl) anthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D APECO78_10165 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D APECO78_10170 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D APECO78_16720 chorismate mutase-T and prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D APECO78_16715 bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_13840 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO78_01180 tyrosine aminotransferase TyrB, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ecoa00410] D APECO78_04095 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D APECO78_11190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_21375 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_10385 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_10665 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APECO78_10935 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APECO78_04105 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D APECO78_14445 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D APECO78_14450 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D APECO78_18080 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:ecoa00430] D APECO78_11190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_21375 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_21005 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO78_05345 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D APECO78_15305 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APECO78_15300 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:ecoa00440] D APECO78_01390 aminoalkylphosphonic acid N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280] D APECO78_01420 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D APECO78_01430 carbon-phosphorus lyase complex subunit PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D APECO78_01425 phnH; carbon-phosphorus lyase complex subunit K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D APECO78_01405 phosphonate transport ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D APECO78_01400 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D APECO78_01415 hypothetical protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D APECO78_01385 phnP; carbon-phosphorus lyase complex accessory protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ecoa00450] D APECO78_00480 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APECO78_18825 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO78_11920 bifunctional beta-cystathionase/maltose regulon regulatory protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO78_00840 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APECO78_22975 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APECO78_12215 bifunctional cysteine desulfurase/selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D APECO78_08210 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D APECO78_11735 putative dimethyl sulfoxide reductase major subunit K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9] D APECO78_11740 oxidoreductase subunit K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9] D APECO78_18105 selenate reductase subunit YgfK K12527 ygfK; putative selenate reductase [EC:1.97.1.9] D APECO78_18120 hypoxanthine oxidase K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D APECO78_18115 oxidoreductase K12529 ygfM; putative selenate reductase FAD-binding subunit D APECO78_17345 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO78_17350 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO78_12655 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D APECO78_21775 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APECO78_14285 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ecoa00460] D APECO78_14375 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D APECO78_21005 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO78_12670 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO78_18520 ansB; L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO78_07810 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APECO78_22610 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D APECO78_16485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ecoa00470] D APECO78_01175 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APECO78_09815 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APECO78_03910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_05405 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_17810 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO78_05945 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_11370 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_00635 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D APECO78_03890 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APECO78_10500 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D APECO78_15585 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D APECO78_13380 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D APECO78_22880 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APECO78_17800 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D APECO78_09810 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ecoa00480] D APECO78_21005 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO78_09975 regulatory protein for cation transport K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D APECO78_07090 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D APECO78_07080 carboxylase K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D APECO78_07085 hydrolase subunit K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D APECO78_06480 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D APECO78_17025 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D APECO78_18470 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D APECO78_02270 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D APECO78_16345 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D APECO78_08650 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D APECO78_04615 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D APECO78_07860 GST-like protein yliJ K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO78_11995 glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO78_15325 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO78_21280 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D APECO78_09640 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APECO78_13880 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D APECO78_13075 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APECO78_12375 btuE; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D APECO78_06995 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO78_18565 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO78_04045 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APECO78_18730 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ecoa00520] D APECO78_12020 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D APECO78_15820 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO78_15875 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D APECO78_15870 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D APECO78_19925 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60] D APECO78_19930 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D APECO78_09555 N-acetyl-D-glucosamine kinase K28207 nagK; N-acetylglucosamine kinase [EC:2.7.1.59] D APECO78_06935 PTS system N-acetyl glucosamine specific transporter subunits IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APECO78_22540 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D APECO78_22775 UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APECO78_19785 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APECO78_00640 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APECO78_20480 periplasmic endochitinase K13381 chiA; bifunctional chitinase/lysozyme [EC:3.2.1.14 3.2.1.17] D APECO78_09495 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D APECO78_06925 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D APECO78_19720 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D APECO78_19515 PTS system transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO78_19535 PTS system N-acetylgalactosamine-specific transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19540 PTS system N-acetylgalactosamine-specific transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D APECO78_19545 N-acetylgalactosamine-specific PTS system K10986 agaD; galactosamine PTS system EIID component D APECO78_19500 N-acetylgalactosamine-specific PTS system K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19505 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO78_19510 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO78_19520 N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.-] D APECO78_06930 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D APECO78_18945 hypothetical protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO78_22535 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO78_05480 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO78_15565 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO78_00925 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO78_11870 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APECO78_09465 PTS system glucose-specific transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO78_11915 bifunctional PTS system maltose and glucose-specific transporter subunits IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO78_15705 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_10050 UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13940 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13875 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO78_07280 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APECO78_07285 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D APECO78_07290 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APECO78_12885 PTS system mannose-specific transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO78_12890 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APECO78_12895 PTS system mannose-specific transporter subunit IID K02796 manZ; mannose PTS system EIID component D APECO78_13920 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO78_13970 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO78_13925 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO78_13975 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO78_20945 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D APECO78_22790 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:ecoa00541] D APECO78_22540 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D APECO78_19825 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO78_09950 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D APECO78_19830 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D APECO78_08570 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APECO78_19925 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60] D APECO78_19940 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D APECO78_22775 UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APECO78_22780 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APECO78_04550 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D APECO78_04445 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D APECO78_19070 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D APECO78_21935 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D APECO78_10050 UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13940 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO78_13875 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO78_15095 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D APECO78_15085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO78_15090 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D APECO78_15100 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D APECO78_22790 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO78_22785 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO78_22800 TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D APECO78_22795 TDP-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D APECO78_13925 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO78_13975 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO78_13995 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APECO78_13990 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ecoa00511] D APECO78_05240 beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APECO78_19185 ebgA; cryptic beta-D-galactosidase subunit alpha K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D APECO78_19190 cryptic beta-D-galactosidase subunit beta K12112 ebgC; evolved beta-galactosidase subunit beta C 00540 Lipopolysaccharide biosynthesis [PATH:ecoa00540] D APECO78_04335 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D APECO78_03930 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D APECO78_04325 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D APECO78_06120 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D APECO78_04340 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D APECO78_08555 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D APECO78_21995 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D APECO78_09235 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D APECO78_13090 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D APECO78_14595 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D APECO78_01495 Putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APECO78_21540 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APECO78_06690 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APECO78_15105 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D APECO78_15645 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D APECO78_21945 ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D APECO78_21940 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D APECO78_21980 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D APECO78_00565 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D APECO78_21990 lipopolysaccharide core heptosyltransferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D APECO78_21920 glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D APECO78_21965 lipopolysaccharide core biosynthesis protein K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-] D APECO78_21985 glucosyltransferase I RfaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO78_21975 UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO78_21955 putative beta1,3-glucosyltransferase K12983 waaV; UDP-glucose:(glucosyl)LPS beta-1,3-glucosyltransferase [EC:2.4.1.-] D APECO78_21970 lipopolysaccharide 1,2-glucosyltransferase K03276 waaR; UDP-glucose/galactose:(glucosyl)LPS alpha-1,2-glucosyl/galactosyltransferase [EC:2.4.1.-] D APECO78_21960 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-] D APECO78_21950 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:ecoa00542] D APECO78_22765 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:ecoa00550] D APECO78_19785 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APECO78_00640 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APECO78_03905 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D APECO78_03890 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APECO78_03875 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APECO78_03910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_05405 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_03880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D APECO78_04300 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D APECO78_19095 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO78_07875 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO78_03885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APECO78_03900 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D APECO78_19880 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_20770 mrcA; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO78_04185 penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APECO78_16325 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APECO78_03895 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_06750 Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_06755 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APECO78_03870 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APECO78_06740 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_07865 D-alanyl-D-alanine carboxypeptidase fraction C K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_13785 dacD; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_19750 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APECO78_15880 periplasmic esterase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:ecoa00552] D APECO78_19095 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO78_07875 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO78_22765 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D APECO78_22765 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:ecoa00543] D APECO78_13965 UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D APECO78_13980 glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D APECO78_14000 acyl transferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D APECO78_14005 colanic acid biosynthesis glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D APECO78_14015 glycosyl transferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D APECO78_14020 putative colanic acid biosynthesis acetyltransferase WcaB K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D APECO78_14025 glycosyl transferase K25875 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA D APECO78_13950 colanic acid biosynthesis glycosyltransferase WcaL K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D APECO78_13955 colanic acid biosynthesis protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D APECO78_22765 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D APECO78_22820 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D APECO78_22810 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D APECO78_09095 N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APECO78_09090 PGA biosynthesis protein K11937 pgaD; biofilm PGA synthesis protein PgaD D APECO78_21880 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ecoa00730] D APECO78_00735 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D APECO78_14230 bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D APECO78_00725 thiamin biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D APECO78_16380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO78_05625 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APECO78_00710 thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D APECO78_05610 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D APECO78_00715 thiazole biosynthesis protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D APECO78_14235 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D APECO78_00730 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D APECO78_05595 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D APECO78_01750 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D APECO78_05420 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO78_09490 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D APECO78_05890 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ecoa00740] D APECO78_10255 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APECO78_05580 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D APECO78_07890 phosphatase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D APECO78_22895 flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D APECO78_19025 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D APECO78_05585 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D APECO78_12135 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D APECO78_03585 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D APECO78_08890 phosphoanhydride phosphorylase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D APECO78_01190 aphA; acid phosphatase/phosphotransferase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2] D APECO78_02875 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D APECO78_23040 FMN reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D APECO78_08675 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D APECO78_14235 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D APECO78_18990 ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D APECO78_09630 putative phosphohydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D APECO78_15375 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:ecoa00750] D APECO78_12010 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D APECO78_12000 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D APECO78_15825 pdxK; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D APECO78_10740 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D APECO78_18350 erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D APECO78_15420 erythronate-4-phosphate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D APECO78_08515 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO78_03720 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D APECO78_16555 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D APECO78_03475 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ecoa00760] D APECO78_16610 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D APECO78_07245 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D APECO78_03985 quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D APECO78_08645 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D APECO78_15765 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO78_03370 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO78_03400 bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APECO78_05920 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APECO78_17310 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APECO78_06915 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APECO78_06775 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D APECO78_17520 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO78_00745 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D APECO78_12530 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D APECO78_17065 competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D APECO78_12675 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D APECO78_09560 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D APECO78_16790 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D APECO78_00610 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D APECO78_11820 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D APECO78_11815 pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D APECO78_16895 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO78_11375 succinate semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:ecoa00770] D APECO78_03840 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22210 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_22685 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO78_03845 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22205 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO78_22690 acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APECO78_22715 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D APECO78_22700 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D APECO78_04110 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D APECO78_05635 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D APECO78_04105 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D APECO78_00650 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D APECO78_22025 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D APECO78_17520 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO78_22000 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D APECO78_03960 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D APECO78_16550 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D APECO78_21165 holo-ACP synthase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D APECO78_05525 acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D APECO78_22695 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO78_14445 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D APECO78_14450 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D APECO78_18080 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO78_04095 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:ecoa00780] D APECO78_07555 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D APECO78_15435 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APECO78_09435 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APECO78_01985 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_09425 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_04330 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APECO78_10315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APECO78_20850 carboxylesterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D APECO78_07550 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO78_18680 hypothetical protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO78_07540 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D APECO78_07560 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D APECO78_11765 putative dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D APECO78_07545 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D APECO78_00645 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APECO78_21565 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:ecoa00785] D APECO78_06730 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D APECO78_06715 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D APECO78_03380 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_04010 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO78_04015 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO78_07155 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APECO78_07160 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO78_18230 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO78_18240 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO78_18235 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ecoa00790] D APECO78_14480 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D APECO78_05420 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO78_13140 nudB; dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D APECO78_19100 folB; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D APECO78_04150 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D APECO78_19725 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D APECO78_03700 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APECO78_15395 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D APECO78_10255 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APECO78_20595 para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D APECO78_12860 aminodeoxychorismate synthase subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D APECO78_09440 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D APECO78_15335 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D APECO78_11835 short chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D APECO78_17435 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D APECO78_17490 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D APECO78_05745 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D APECO78_17590 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D APECO78_07575 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D APECO78_07585 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D APECO78_07595 moaE; molybdopterin guanine dinucleotide biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D APECO78_03500 molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO78_07580 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO78_07805 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D APECO78_18100 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D APECO78_00010 molybdopterin-guanine dinucleotide biosynthesis protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ecoa00670] D APECO78_03700 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APECO78_11835 short chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D APECO78_06145 bifunctional 5,10-methylene-tetrahydrofolatedehydrogenase/5,10-methylene-tetrahydrofolatecyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D APECO78_16485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO78_16225 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D APECO78_00795 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APECO78_18240 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO78_00840 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APECO78_17740 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APECO78_10030 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D APECO78_00495 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D APECO78_18270 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D APECO78_18445 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO78_18230 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_18235 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APECO78_05080 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D APECO78_05085 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ecoa00860] D APECO78_15745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO78_09925 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D APECO78_04210 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D APECO78_05350 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D APECO78_22855 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D APECO78_22850 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D APECO78_00750 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D APECO78_15910 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D APECO78_00065 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D APECO78_23070 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D APECO78_05895 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D APECO78_22845 uroporphyrinogen III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D APECO78_20635 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D APECO78_05650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D APECO78_10205 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D APECO78_13760 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D APECO78_13755 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D APECO78_13750 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D APECO78_06770 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D APECO78_15990 ethanolamine utilization cobalamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154] D APECO78_11895 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D APECO78_20470 bacterioferrin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ecoa00130] D APECO78_01015 ubiC; chorismate pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D APECO78_01020 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D APECO78_23035 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D APECO78_15375 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APECO78_18245 oxidoreductase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D APECO78_19635 peptidase, U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D APECO78_19640 hypothetical protein K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D APECO78_19630 hypothetical protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT D APECO78_14990 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D APECO78_18250 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D APECO78_22995 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D APECO78_06900 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D APECO78_15150 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D APECO78_06545 isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2] D APECO78_15145 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D APECO78_15140 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D APECO78_15130 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D APECO78_15125 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D APECO78_15135 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36] D APECO78_12250 acyl-CoA esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D APECO78_00405 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D APECO78_09010 Trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D APECO78_02035 NAD(P)H:quinone oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ecoa00900] D APECO78_05610 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D APECO78_04295 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D APECO78_17325 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D APECO78_09915 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D APECO78_17320 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D APECO78_16305 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D APECO78_03605 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_15375 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APECO78_18160 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D APECO78_05615 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D APECO78_19775 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D APECO78_04300 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:ecoa00907] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_02315 putative zinc-binding dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D APECO78_16020 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO78_18410 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ecoa00523] D APECO78_22790 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO78_22785 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ecoa01053] D APECO78_15150 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D APECO78_06545 isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2] D APECO78_06555 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D APECO78_06560 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D APECO78_06490 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D APECO78_06550 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D APECO78_06510 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D APECO78_06565 thioesterase K24147 entH; proofreading thioesterase EntH C 01055 Biosynthesis of vancomycin group antibiotics D APECO78_22785 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ecoa00946] D APECO78_14375 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D APECO78_02855 penicillin G acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:ecoa00332] D APECO78_04640 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D APECO78_04645 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ecoa00261] D APECO78_17345 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO78_17350 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO78_00920 aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO78_03465 bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO78_00485 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO78_20960 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO78_16105 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO78_03615 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ecoa00521] D APECO78_15705 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO78_06985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO78_16395 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APECO78_22790 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO78_22785 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D APECO78_15705 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ecoa00525] D APECO78_22790 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO78_22785 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ecoa00401] D APECO78_16720 chorismate mutase-T and prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_13840 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO78_01180 tyrosine aminotransferase TyrB, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D APECO78_10185 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D APECO78_09125 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_09420 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_01985 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_09425 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_10315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D APECO78_09430 hypothetical protein K02078 acpP; acyl carrier protein D APECO78_18675 hypothetical protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ecoa00999] D APECO78_18445 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO78_20195 dehydroshikimate reductase, NAD(P)-binding protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D APECO78_14375 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ecoa00362] D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_05270 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D APECO78_05280 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D APECO78_05275 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D APECO78_11025 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D APECO78_16440 phenylpropionate dioxygenase ferredoxin reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D APECO78_16355 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_10710 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:ecoa00627] D APECO78_08830 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D APECO78_15375 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APECO78_14940 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO78_14945 acetyl-CoA:acetoacetyl-CoA transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D APECO78_12290 acetyl-CoA: acetoacetyl-CoA transferase subunit alpha/beta K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:ecoa00364] D APECO78_18785 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APECO78_22980 putative dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:ecoa00625] D APECO78_11115 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO78_21765 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ecoa00361] D APECO78_18785 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APECO78_22980 putative dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:ecoa00623] D APECO78_18785 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APECO78_22980 putative dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:ecoa00622] D APECO78_11025 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D APECO78_05270 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D APECO78_05280 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D APECO78_05275 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:ecoa00633] D APECO78_08030 nitroreductase A K10678 nfsA; nitroreductase [EC:1.-.-.-] D APECO78_06465 dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D APECO78_12070 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D APECO78_08850 hydrogenase 1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO78_18760 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO78_08845 hydrogenase-1 small chain K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D APECO78_18775 hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:ecoa00643] D APECO78_10660 phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D APECO78_01970 hypothetical protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:ecoa00930] D APECO78_10700 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APECO78_23050 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO78_15520 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:ecoa00621] D APECO78_11025 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D APECO78_05270 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D APECO78_05280 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D APECO78_05275 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:ecoa00626] D APECO78_11115 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO78_21765 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO78_05300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO78_10065 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:ecoa00984] D APECO78_15525 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO78_23045 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ecoa03020] D APECO78_00695 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APECO78_00700 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APECO78_20265 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APECO78_22085 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ecoa03010] D APECO78_r23267 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23271 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23273 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23275 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23277 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23279 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23281 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23283 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23285 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23287 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23289 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23253 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23255 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23257 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23263 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_08535 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D APECO78_04275 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D APECO78_20360 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D APECO78_20270 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D APECO78_20305 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D APECO78_01930 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D APECO78_20495 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D APECO78_20320 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D APECO78_19965 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D APECO78_20395 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D APECO78_20275 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D APECO78_20500 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D APECO78_20280 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D APECO78_20325 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D APECO78_19670 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D APECO78_16765 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D APECO78_20345 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D APECO78_01940 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D APECO78_20370 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D APECO78_03575 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D APECO78_19135 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D APECO78_00680 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D APECO78_20375 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D APECO78_20390 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D APECO78_20385 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D APECO78_20330 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D APECO78_20315 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D APECO78_01945 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D APECO78_00685 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D APECO78_00675 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D APECO78_00690 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D APECO78_19970 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D APECO78_20340 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D APECO78_20295 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D APECO78_20355 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D APECO78_20260 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D APECO78_20310 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D APECO78_16750 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D APECO78_12405 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D APECO78_19770 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D APECO78_20365 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D APECO78_20380 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D APECO78_20335 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D APECO78_14650 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D APECO78_19765 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D APECO78_22015 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D APECO78_20350 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D APECO78_20300 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D APECO78_00435 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D APECO78_05015 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D APECO78_09405 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D APECO78_22010 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D APECO78_22380 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D APECO78_12410 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D APECO78_05010 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D APECO78_20285 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:ecoa00970] D APECO78_t23089 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23109 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23187 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23197 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23229 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23239 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23119 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23183 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23201 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23203 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23207 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23171 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23173 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23175 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23177 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23111 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO78_t23113 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO78_t23241 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO78_t23165 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D APECO78_t23121 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23123 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23127 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23129 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23083 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23093 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23097 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23167 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23217 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23247 tRNA-His K14226 tRNA-His; tRNA His D APECO78_t23077 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23087 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23107 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23199 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23231 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23237 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23099 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23101 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23103 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23131 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23163 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23249 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23139 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23143 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23145 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23147 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23195 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23125 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23133 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23211 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23213 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23215 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23221 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23223 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23091 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO78_t23219 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO78_t23179 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23181 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23233 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23251 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23149 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23151 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23153 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23169 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23209 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23079 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23227 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23243 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D APECO78_t23081 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO78_t23155 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO78_t23157 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO78_t23137 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23141 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23159 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23161 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23189 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23191 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23193 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23235 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D APECO78_15745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO78_06940 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APECO78_17045 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APECO78_13145 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO78_08640 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APECO78_21605 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APECO78_21600 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APECO78_12420 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APECO78_08235 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APECO78_21775 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APECO78_06130 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APECO78_14285 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APECO78_20225 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D APECO78_02260 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APECO78_06790 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO78_03590 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APECO78_01580 lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO78_18165 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO78_13195 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO78_04415 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APECO78_16300 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APECO78_12395 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APECO78_12390 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APECO78_12005 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO78_20710 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:ecoa03008] D APECO78_16570 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO78_01755 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ecoa03060] D APECO78_20290 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APECO78_00665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APECO78_19710 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APECO78_05545 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D APECO78_05550 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D APECO78_05540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APECO78_22395 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO78_03940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO78_21890 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APECO78_03935 SecA regulator SecM K13301 secM; secretion monitor D APECO78_16770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APECO78_21110 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO78_23010 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D APECO78_23015 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D APECO78_23020 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APECO78_06710 tatE; twin arginine translocase protein E K03425 tatE; sec-independent protein translocase protein TatE D APECO78_16575 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D APECO78_03595 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ecoa04122] D APECO78_16380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO78_16335 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APECO78_21140 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D APECO78_20505 sulfur transfer complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D APECO78_20510 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D APECO78_20515 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D APECO78_08835 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D APECO78_09625 trmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D APECO78_07595 moaE; molybdopterin guanine dinucleotide biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D APECO78_07575 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D APECO78_07590 moaD; molybdopterin synthase small subunit K03636 moaD; sulfur-carrier protein D APECO78_12620 thiosulfate sulfur transferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D APECO78_07800 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D APECO78_07585 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D APECO78_03500 molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO78_07580 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO78_05625 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APECO78_00720 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D APECO78_00725 thiamin biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:ecoa03018] D APECO78_17755 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D APECO78_09385 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D APECO78_22740 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D APECO78_17510 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO78_19665 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APECO78_07655 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D APECO78_01825 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APECO78_19655 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APECO78_22940 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APECO78_22755 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_03520 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO78_01655 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO78_01790 RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO78_16230 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APECO78_04155 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ecoa03030] D APECO78_13020 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APECO78_04490 DNA polymerase III, epsilon subunit-related 3-5 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO78_04350 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO78_05870 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO78_09455 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO78_06780 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO78_03005 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APECO78_02265 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO78_22370 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO78_01170 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APECO78_19140 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D APECO78_01210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO78_04485 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D APECO78_04345 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D APECO78_00045 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO78_15790 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_22070 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ecoa03410] D APECO78_11980 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D APECO78_16645 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D APECO78_18545 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D APECO78_22005 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D APECO78_07095 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D APECO78_14070 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D APECO78_21555 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D APECO78_19150 G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D APECO78_12580 exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D APECO78_14515 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D APECO78_00045 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO78_18175 ssDNA exonuclease, 5' -> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO78_15790 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_22070 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ecoa03420] D APECO78_09530 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D APECO78_01205 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D APECO78_07565 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D APECO78_13345 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D APECO78_22900 DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO78_00045 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO78_15790 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_22070 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ecoa03430] D APECO78_17255 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D APECO78_01780 MutL, subunit of MutHLS complex, methyl-directed mismatch repair K03572 mutL; DNA mismatch repair protein MutL D APECO78_17765 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH D APECO78_22900 DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO78_13790 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D APECO78_16275 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D APECO78_05620 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D APECO78_13030 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D APECO78_18175 ssDNA exonuclease, 5' -> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO78_01210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO78_04350 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO78_22370 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO78_05870 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO78_06780 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO78_09455 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO78_04490 DNA polymerase III, epsilon subunit-related 3-5 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO78_13020 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APECO78_02265 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO78_03005 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APECO78_15790 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_22070 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_07950 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_20725 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ecoa03440] D APECO78_18175 ssDNA exonuclease, 5' -> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO78_01210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO78_22365 recombination protein F K03629 recF; DNA replication and repair protein RecF D APECO78_16560 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D APECO78_05880 recombination protein RecR K06187 recR; recombination protein RecR D APECO78_17060 recombinase A K03553 recA; recombination protein RecA D APECO78_00045 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO78_13120 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D APECO78_13115 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D APECO78_13130 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D APECO78_22100 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D APECO78_17705 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D APECO78_17715 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D APECO78_17700 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D APECO78_04350 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO78_22370 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO78_05870 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO78_06780 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO78_09455 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO78_04490 DNA polymerase III, epsilon subunit-related 3-5 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO78_13020 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APECO78_02265 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO78_03005 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APECO78_00430 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D APECO78_01935 primosomal replication protein N K02686 priB; primosomal replication protein N D APECO78_05855 primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D APECO78_02965 Primosomal protein 1 K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ecoa03250] D APECO78_20610 peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda [PATH:ecoa03258] D APECO78_06215 DNA packaging Nu1 K22014 Nu1; Enterobacteria phage terminase small subunit, DNA-packaging protein D APECO78_07495 phage terminase small subunit (DNA packaging protein) K22014 Nu1; Enterobacteria phage terminase small subunit, DNA-packaging protein D APECO78_11515 putative tail fiber chaperone; Qin prophage K26980 tfa; Enterobacteria phage tail fiber assembly protein # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ecoa02010] D APECO78_15855 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APECO78_00340 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APECO78_15850 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D APECO78_15845 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D APECO78_15840 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APECO78_05330 tauA; taurine transporter substrate binding subunit K15551 tauA; taurine transport system substrate-binding protein D APECO78_05340 taurine transporter subunit K15552 tauC; taurine transport system permease protein D APECO78_05335 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APECO78_08670 alkanesulfonate transporter subunit K15553 ssuA; sulfonate transport system substrate-binding protein D APECO78_08660 alkanesulfonate transporter permease K15554 ssuC; sulfonate transport system permease protein D APECO78_08655 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APECO78_07310 modA; molybdate transporter periplasmic protein K02020 modA; molybdate transport system substrate-binding protein D APECO78_07315 modB; molybdate ABC transporter permease protein K02018 modB; molybdate transport system permease protein D APECO78_07320 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D APECO78_07295 molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D APECO78_03790 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D APECO78_03785 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein D APECO78_03780 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D APECO78_09575 spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein D APECO78_09580 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D APECO78_09585 potB; spermidine/putrescine ABC transporter membrane protein K11071 potB; spermidine/putrescine transport system permease protein D APECO78_09590 putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D APECO78_08045 putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein D APECO78_08060 putrescine transporter subunit: membrane component of ABC superfamily K11074 potI; putrescine transport system permease protein D APECO78_08055 putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein D APECO78_08050 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D APECO78_16985 glycine betaine transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein D APECO78_16980 glycine betaine transporter membrane protein K02001 proW; glycine betaine/proline transport system permease protein D APECO78_16975 Glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D APECO78_14370 transporter subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D APECO78_14355 quaternare amine family ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D APECO78_14365 binding-protein-dependent transport system inner membrane protein K05846 opuBD; osmoprotectant transport system permease protein D APECO78_14360 putative ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APECO78_00980 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APECO78_00975 maltose transport system permease protein malF K10109 malF; maltose/maltodextrin transport system permease protein D APECO78_00970 maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein D APECO78_00990 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO78_10465 sugar transporter subunit K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO78_16470 sugar ABC transporter substrate-binding protein K23545 yphF; sugar transport system substrate-binding protein D APECO78_16460 putative sugar transporter subunit, membrane component of ABC superfamily protein K23546 yphD; sugar transport system permease protein D APECO78_16465 putative sugar ABC transporter ATP-binding protein K23547 yphE; sugar transport system ATP-binding protein D APECO78_19800 ABC transporter substrate-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D APECO78_19805 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D APECO78_19810 toluene ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D APECO78_19795 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D APECO78_19815 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D APECO78_22645 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein D APECO78_22640 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D APECO78_22635 D-ribose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APECO78_22630 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D APECO78_13305 L-arabinose ABC transporter substrate binding component K10537 araF; L-arabinose transport system substrate-binding protein D APECO78_13295 araH; L-arabinose transporter permease protein K10538 araH; L-arabinose transport system permease protein D APECO78_13300 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D APECO78_02110 sugar transporter subunit K23508 ytfQ; galactofuranose transport system substrate-binding protein D APECO78_02120 putative sugar transporter subunit K23509 ytfT; galactofuranose transport system permease protein D APECO78_02125 inner membrane ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D APECO78_02115 putative sugar transporter subunit K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D APECO78_14465 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D APECO78_14455 beta-methylgalactoside transporter inner membrane protein K10541 mglC; methyl-galactoside transport system permease protein D APECO78_14460 galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D APECO78_21640 xylF; D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D APECO78_21650 putative membrane component of xylose transport system K10544 xylH; D-xylose transport system permease protein D APECO78_21645 xylose transporter ATP-binding subunit K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D APECO78_01365 D-allose transporter subunit K10549 alsB; D-allose transport system substrate-binding protein D APECO78_01355 D-allose transporter subunit K10550 alsC; D-allose transport system permease protein D APECO78_01360 D-allose transporter ATP-binding protein K10551 alsA; D-allose transport system ATP-binding protein [EC:7.5.2.8] D APECO78_21035 glycerol-3-phosphate transporter periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D APECO78_21030 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D APECO78_21025 glycerol-3-phosphate transporter membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D APECO78_21020 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D APECO78_22510 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D APECO78_22505 phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D APECO78_22500 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D APECO78_22495 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D APECO78_01445 alkylphosphonate ABC transporter periplasmic phosphonates-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D APECO78_01440 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D APECO78_01450 phosphonate ABC transporter ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D APECO78_15370 ABC transporter lysine/arginine/ornithine binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APECO78_15355 histidine/lysine/arginine/ornithine ABC transporter permease HisM K10015 hisM; histidine transport system permease protein D APECO78_15360 histidine/lysine/arginine/ornithine ABC transporter permease HisQ K10016 hisQ; histidine transport system permease protein D APECO78_15350 histidine/lysine/arginine/ornithine transporter subunit K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_15365 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D APECO78_07725 glutamine ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein D APECO78_07720 glutamine ABC transporter permease K10037 glnP; glutamine transport system permease protein D APECO78_07715 glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_08075 arginine 3rd transport system periplasmic binding protein ArtJ K09996 artJ; arginine transport system substrate-binding protein D APECO78_08090 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D APECO78_08080 arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D APECO78_08085 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D APECO78_08095 arginine transport system ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_06865 glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APECO78_06855 glutamate/aspartate transport system permease GltK K10002 gltK; glutamate/aspartate transport system permease protein D APECO78_06860 glutamate/aspartate ABC transporter permease component K10003 gltJ; glutamate/aspartate transport system permease protein D APECO78_06850 glutamate/aspartate transport ATP-binding protein gltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APECO78_20160 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D APECO78_20165 putative amino-acid transporter subunit K09970 aapQ; general L-amino acid transport system permease protein D APECO78_20170 transport system permease K09971 aapM; general L-amino acid transport system permease protein D APECO78_20175 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D APECO78_13385 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APECO78_13375 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D APECO78_13370 amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_21070 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO78_21090 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO78_21065 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APECO78_21060 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D APECO78_21055 leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D APECO78_21050 leucine/isoleucine/valine transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D APECO78_04430 DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein D APECO78_22150 cytoplasmic membrane lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein D APECO78_04435 DL-methionine transporter permease K02072 metI; D-methionine transport system permease protein D APECO78_04440 DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D APECO78_10075 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10530 Putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10080 oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APECO78_10085 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D APECO78_10090 oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D APECO78_10095 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO78_21535 dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein D APECO78_21525 dipeptide transporter permease DppB K12369 dppB; dipeptide transport system permease protein D APECO78_21520 dipeptide transporter K12370 dppC; dipeptide transport system permease protein D APECO78_21515 dipeptide transporter ATP-binding subunit K12371 dppD; dipeptide transport system ATP-binding protein D APECO78_21510 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein D APECO78_10345 antimicrobial peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D APECO78_10340 antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D APECO78_10335 antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D APECO78_10330 antimicrobial peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D APECO78_10325 antimicrobial peptide ABC system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D APECO78_21170 nickel ABC transporter periplasmic-binding protein K15584 nikA; nickel transport system substrate-binding protein D APECO78_21175 nickel transporter permease NikB K15585 nikB; nickel transport system permease protein D APECO78_21180 nickel transporter permease NikC K15586 nikC; nickel transport system permease protein D APECO78_21185 nickel transporter subunit K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO78_21190 nikE; nickel transporter ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO78_07820 glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein D APECO78_07825 glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D APECO78_07830 glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein D APECO78_07815 glutathione transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D APECO78_14610 microcin C ABC transporter periplasmic binding protein YejA K13893 yejA; microcin C transport system substrate-binding protein D APECO78_14615 putative transport system permease K13894 yejB; microcin C transport system permease protein D APECO78_14620 microcin C ABC transporter permease K13895 yejE; microcin C transport system permease protein D APECO78_14625 microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D APECO78_02410 iron-dicitrate transporter subunit K23181 fecB; ferric citrate transport system substrate-binding protein D APECO78_02400 iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein D APECO78_02405 fecC K23183 fecC; ferric citrate transport system permease protein D APECO78_02395 iron-dicitrate transporter ATP-binding subunit K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D APECO78_06540 iron-enterobactin transporter periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D APECO78_06530 iron-enterobactin transporter membrane protein K23186 fepD; iron-siderophore transport system permease protein D APECO78_06525 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D APECO78_06520 Ferric enterobactin transport ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D APECO78_04200 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D APECO78_04205 iron-hydroxamate transporter permease subunit K23228 fhuB; ferric hydroxamate transport system permease protein D APECO78_04195 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D APECO78_04230 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D APECO78_12380 vtamin B12-transporter permease K06073 btuC; vitamin B12 transport system permease protein D APECO78_12370 vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D APECO78_13100 znuA; high-affinity zinc transporter periplasmic component K09815 znuA; zinc transport system substrate-binding protein D APECO78_13110 high-affinity zinc transporter membrane protein K09816 znuB; zinc transport system permease protein D APECO78_13105 znuC; high-affinity zinc transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D APECO78_18365 lipoprotein K16785 ecfT; energy-coupling factor transport system permease protein D APECO78_18370 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO78_18375 putative ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO78_11325 autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein D APECO78_11315 autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein D APECO78_11320 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein D APECO78_11310 autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein D APECO78_09540 outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein D APECO78_09550 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D APECO78_09545 lipoprotein transporter ATP-binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D APECO78_14820 cytochrome c biogenesis protein CcmD K02196 ccmD; heme exporter protein D D APECO78_14825 heme exporter protein C K02195 ccmC; heme exporter protein C D APECO78_14830 Heme exporter protein B K02194 ccmB; heme exporter protein B D APECO78_14835 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D APECO78_02275 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D APECO78_18690 Permease YjgP/YjgQ family protein precursor K07091 lptF; lipopolysaccharide export system permease protein D APECO78_02280 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D APECO78_18685 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D APECO78_19845 lipopolysaccharide ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D APECO78_21100 cell division protein K09811 ftsX; cell division transport system permease protein D APECO78_21105 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APECO78_08550 lipid transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D APECO78_05765 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO78_05770 multidrug transporter membrane\ATP-binding components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO78_08200 cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D APECO78_08205 cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D APECO78_08170 macrolide ABC transporter ATP-binding protein/membrane protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APECO78_14890 ABC transporter ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D APECO78_11205 putative ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ecoa02060] D APECO78_15815 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D APECO78_15810 phosphocarrier protein ptsH K02784 ptsH; phosphocarrier protein HPr D APECO78_15820 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO78_09465 PTS system glucose-specific transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO78_06935 PTS system N-acetyl glucosamine specific transporter subunits IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APECO78_11915 bifunctional PTS system maltose and glucose-specific transporter subunits IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO78_22480 PTS system beta-glucoside-specific transporter subunits IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APECO78_17140 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D APECO78_22275 PTS system alpha-glucoside-specific transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D APECO78_02170 PTS system trehalose(maltose)-specific transporter subunits IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APECO78_15875 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D APECO78_18405 cmtB; PTS system mannitol-specific transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D APECO78_18400 mannitol-specific PTS system enzyme II component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO78_21825 PTS system mannitol-specific transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO78_07180 PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D APECO78_11425 PTS system cellobiose-specific transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO78_12510 N,N-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO78_11435 PTS system cellobiose-specific transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO78_12520 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO78_11430 PTS system cellobiose-specific transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APECO78_12515 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APECO78_12885 PTS system mannose-specific transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO78_12890 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APECO78_12895 PTS system mannose-specific transporter subunit IID K02796 manZ; mannose PTS system EIID component D APECO78_00880 sorbose-permease PTS system IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D APECO78_00875 sorbose-specific PTS system EIIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D APECO78_00870 PTS system mannose-specific transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component D APECO78_00865 sorbose permease IID component K02815 sorM; sorbose PTS system EIID component D APECO78_19515 PTS system transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO78_19500 N-acetylgalactosamine-specific PTS system K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19505 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO78_19510 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO78_19535 PTS system N-acetylgalactosamine-specific transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19540 PTS system N-acetylgalactosamine-specific transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D APECO78_19545 N-acetylgalactosamine-specific PTS system K10986 agaD; galactosamine PTS system EIID component D APECO78_17085 PTS system glucitol/sorbitol-specific transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D APECO78_17080 srlE; PTS system glucitol/sorbitol-specific transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D APECO78_17075 glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D APECO78_02620 PTS system IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO78_14180 PTS system galactitol-specific transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO78_02635 PTS system IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO78_14175 PTS system galactitol-specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO78_02630 PTS system IIC component K02775 gatC; galactitol PTS system EIIC component D APECO78_14170 PTS system galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component D APECO78_01905 PTS system L-ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APECO78_01900 PTS system L-ascorbate-specific transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APECO78_01895 PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D APECO78_14565 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D APECO78_14555 PTS system fructose-specific transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO78_14560 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D APECO78_17750 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D APECO78_19870 PTS system phosphohistidinoprotein-hexose phosphotransferase Npr K08485 ptsO; phosphocarrier protein NPr D APECO78_19860 PTS system sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ecoa03070] D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_17930 type III secretion protein EprI K03221 yscF; type III secretion protein F D APECO78_17980 type III secretion system protein SpaO K03225 yscQ; type III secretion protein Q D APECO78_18625 General secretion pathway protein D K02453 gspD; general secretion pathway protein D D APECO78_20415 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D APECO78_20410 general secretory pathway component, cryptic K02452 gspC; general secretion pathway protein C D APECO78_20425 general secretory pathway component, cryptic K02455 gspF; general secretion pathway protein F D APECO78_18605 type II secretion protein K02456 gspG; general secretion pathway protein G D APECO78_20430 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D APECO78_18600 type II secretion protein GspH K02457 gspH; general secretion pathway protein H D APECO78_20435 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D APECO78_18595 type II secretion protein K02458 gspI; general secretion pathway protein I D APECO78_20440 general secretion pathway protein i precursor K02458 gspI; general secretion pathway protein I D APECO78_18590 type II secretion protein GspJ K02459 gspJ; general secretion pathway protein J D APECO78_20445 putative general secretory pathway component, cryptic K02459 gspJ; general secretion pathway protein J D APECO78_18585 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D APECO78_20450 general secretion pathway protein K K02460 gspK; general secretion pathway protein K D APECO78_18580 GspL-like protein K02461 gspL; general secretion pathway protein L D APECO78_20455 General secretion pathway protein L K02461 gspL; general secretion pathway protein L D APECO78_18575 general secretion pathway protein YghD K02462 gspM; general secretion pathway protein M D APECO78_20460 general secretion pathway protein M K02462 gspM; general secretion pathway protein M D APECO78_18620 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO78_20420 general secretory pathway component, cryptic K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO78_20465 bifunctional transmembrane prepilin leader peptidase/methylase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APECO78_05545 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D APECO78_05550 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D APECO78_00665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APECO78_19710 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APECO78_20290 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APECO78_05540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APECO78_22395 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO78_03940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO78_03935 SecA regulator SecM K13301 secM; secretion monitor D APECO78_21110 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO78_21890 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APECO78_16770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APECO78_23010 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D APECO78_23015 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D APECO78_23020 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APECO78_06710 tatE; twin arginine translocase protein E K03425 tatE; sec-independent protein translocase protein TatE D APECO78_06420 Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO78_10995 ImpA family type VI secretion-associated protein K11904 vgrG; type VI secretion system secreted protein VgrG B B 09132 Signal transduction C 02020 Two-component system [PATH:ecoa02020] D APECO78_05505 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APECO78_05500 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D APECO78_05420 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO78_22510 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D APECO78_09605 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO78_09610 DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO78_20810 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO78_20815 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D APECO78_14910 outer membrane porin protein C K09475 ompC; outer membrane pore protein C D APECO78_08635 outer membrane protein F K09476 ompF; outer membrane pore protein F D APECO78_13605 hypothetical protein K09476 ompF; outer membrane pore protein F D APECO78_00315 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO78_00320 DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APECO78_19320 EnvZ/OmpR regulon moderator K25864 mzrA; modulator protein MzrA D APECO78_11850 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APECO78_11845 two-component response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D APECO78_04245 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APECO78_03445 two-component system sensor kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D APECO78_03440 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D APECO78_14120 signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APECO78_14125 DNA-binding transcriptional regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR D APECO78_14100 multidrug efflux system subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D APECO78_14105 multidrug efflux system subunit MdtB K07788 mdtB; multidrug efflux pump D APECO78_14110 multidrug efflux system, subunit C K07789 mdtC; multidrug efflux pump D APECO78_14115 transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D APECO78_16045 aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump D APECO78_01485 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO78_01490 two-component response regulator K07771 basR; two-component system, OmpR family, response regulator BasR D APECO78_15085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO78_06425 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO78_06430 DNA-binding transcriptional activator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO78_06435 copper/silver efflux system outer membrane protein CusC K07796 cusC; outer membrane protein, copper/silver efflux system D APECO78_06440 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D APECO78_06445 copper/silver efflux system membrane fusionprotein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system D APECO78_06450 copper/silver efflux system, membrane component K07787 cusA; copper/silver efflux system protein D APECO78_18910 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO78_18905 DNA-binding transcriptional regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D APECO78_13275 transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO78_13270 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO78_13405 flagellin K02406 fliC; flagellin D APECO78_13395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APECO78_13265 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO78_07005 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APECO78_07000 DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APECO78_07020 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D APECO78_07015 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D APECO78_07010 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D APECO78_07025 high-affinity potassium-transporting ATPase A chain K01545 kdpF; potassium-transporting ATPase KdpF subunit D APECO78_08955 hybrid sensory histidine kinase TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D APECO78_08965 DNA-binding transcriptional regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D APECO78_08970 trimethylamine N-oxide reductase cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D APECO78_08975 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO78_08980 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO78_19890 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO78_03455 two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APECO78_22375 DNA replication initiation factor K02313 dnaA; chromosomal replication initiator protein D APECO78_11165 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D APECO78_06495 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor D APECO78_06675 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D APECO78_06680 two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB D APECO78_06670 [citrate [pro-3S]-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D APECO78_06665 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D APECO78_06660 citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D APECO78_06655 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D APECO78_06650 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D APECO78_06645 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D APECO78_06640 citrate/succinate antiporter CitT K09477 citT; citrate:succinate antiporter D APECO78_01555 sensory histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APECO78_01550 DNA-binding transcriptional activator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D APECO78_01545 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D APECO78_11120 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D APECO78_14340 sensory kinase in two-component system with YehT K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D APECO78_14335 two-component response-regulatory protein YehT K27883 btsR; two-component system, LytTR family, low-concentration pyruvate response regulator D APECO78_02870 putative carbon starvation protein K23676 btsT; pyruvate/proton symporter D APECO78_15655 hypothetical protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3] D APECO78_15660 putative response regulator in two-component system with YpdA K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator D APECO78_21545 oxalate/formate antiporter protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D APECO78_09995 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APECO78_09990 fused DNA-binding response regulator NarL and sensory histidine kinase NarX in two-component regulatory system K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D APECO78_16040 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APECO78_14795 transcriptional regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D APECO78_10005 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11060 nitrate reductase 2 (NRZ), alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10010 narH; nitrate reductase A subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11055 narY; nitrate reductase Z subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10020 Respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11045 cryptic nitrate reductase 2 subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10015 nitrate reductase molybdenum cofactor assembly chaperone NarJ K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D APECO78_11050 nitrate reductase K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D APECO78_11090 formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APECO78_11095 formate dehydrogenase, nitrate-inducible, major subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APECO78_11100 formate dehydrogenase-N subunit beta K08349 fdnH; formate dehydrogenase-N, beta subunit D APECO78_11105 Formate dehydrogenase-N gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit D APECO78_01725 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO78_01720 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO78_01715 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D APECO78_01710 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D APECO78_22185 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D APECO78_22190 sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D APECO78_22195 DNA-binding transcriptional activator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA D APECO78_22180 sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D APECO78_04425 outer membrane lipoprotein K06080 rcsF; RcsF protein D APECO78_14925 hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO78_14915 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO78_13545 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO78_14920 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APECO78_17545 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO78_13350 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APECO78_13365 DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO78_17040 carbon storage regulator K03563 csrA; carbon storage regulator D APECO78_15605 hybrid sensory histidine kinase in two-component regulatory system with EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D APECO78_15600 DNA-binding transcriptional activator EvgA K07690 evgA; two-component system, NarL family, response regulator EvgA D APECO78_15595 EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component K07797 emrK; multidrug resistance protein K D APECO78_15590 putative multidrug efflux system K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein D APECO78_11235 hypothetical protein K23236 safA; two-component-system connector protein SafA D APECO78_06180 transcriptional regulator FimZ K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D APECO78_01705 ampC; beta-lactamase/D-alanine carboxypeptidase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D APECO78_02720 chaperone FimC, periplasmic K07346 fimC; fimbrial chaperone protein D APECO78_08685 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_11270 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_19560 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_22525 lfpB; fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_02725 outer membrane usher protein, type 1 fimbrial synthesis K07347 fimD; outer membrane usher protein D APECO78_04135 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_08690 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_11265 putative fimbrial usher protein K07347 fimD; outer membrane usher protein D APECO78_14260 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_19565 Fimbrial usher family protein K07347 fimD; outer membrane usher protein D APECO78_22520 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_04265 PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D APECO78_16495 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D APECO78_00080 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APECO78_00075 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D APECO78_00090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO78_00780 sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D APECO78_00785 transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG D APECO78_00775 zraP; zinc resistance protein K07803 zraP; zinc resistance-associated protein D APECO78_14930 sensory histidine kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D APECO78_14935 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC D APECO78_14940 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO78_14945 acetyl-CoA:acetoacetyl-CoA transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D APECO78_14950 short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_21430 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D APECO78_19850 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D APECO78_16510 sensory histidine kinase GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO78_16500 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D APECO78_08845 hydrogenase-1 small chain K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D APECO78_18775 hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D APECO78_08850 hydrogenase 1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO78_18760 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO78_08855 hydrogenase 1 b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D APECO78_13235 chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APECO78_02930 methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APECO78_13245 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APECO78_10815 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APECO78_13240 methyl-accepting protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D APECO78_19165 aerotaxis sensor receptor K03776 aer; aerotaxis receptor D APECO78_13250 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D APECO78_13255 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO78_13225 chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO78_13230 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO78_01950 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D APECO78_21710 TRAP family 2,3-diketo-L-gulonate transporter periplasmic 2,3-diketo-L-gulonate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D APECO78_01960 TRAP dicarboxylate transporter subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein D APECO78_21700 2,3-diketo-L-gulonate TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D APECO78_01955 transporter K11690 dctM; TRAP-type transport system large permease protein D APECO78_21705 L-dehydroascorbate transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D APECO78_06850 glutamate/aspartate transport ATP-binding protein gltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APECO78_06855 glutamate/aspartate transport system permease GltK K10002 gltK; glutamate/aspartate transport system permease protein D APECO78_06860 glutamate/aspartate ABC transporter permease component K10003 gltJ; glutamate/aspartate transport system permease protein D APECO78_06865 glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APECO78_20580 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO78_05945 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_11370 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO78_07190 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO78_08875 cytochrome bd-II oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO78_07195 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APECO78_08880 cytochrome bd-II oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APECO78_07200 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D APECO78_08885 hypothetical protein K22501 appX; cytochrome bd-II ubiquinol oxidase subunit AppX [EC:7.1.1.7] D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_08905 putative polysaccharide export protein gfcE precursor K01991 wza; polysaccharide biosynthesis/export protein D APECO78_14040 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APECO78_08900 phosphotyrosine-protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D APECO78_14035 tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D APECO78_08895 cryptic autophosphorylating protein tyrosine kinase Etk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO78_14030 tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO78_22775 UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APECO78_22780 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APECO78_07355 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D APECO78_02425 RNA polymerase sigma factor FecI K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D APECO78_02420 fec operon regulator FecR K07165 fecR; transmembrane sensor D APECO78_09320 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome D APECO78_11895 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 04146 Peroxisome [PATH:ecoa04146] D APECO78_12825 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D APECO78_00745 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D APECO78_09640 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APECO78_12490 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6] D APECO78_12050 superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D APECO78_00300 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D APECO78_12100 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D APECO78_06995 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO78_18565 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ecoa02024] D APECO78_17020 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APECO78_01790 RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO78_10185 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D APECO78_07265 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO78_12345 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO78_16725 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO78_18910 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO78_18905 DNA-binding transcriptional regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D APECO78_16510 sensory histidine kinase GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO78_16500 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D APECO78_13275 transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO78_13270 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO78_07000 DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APECO78_13365 DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO78_11190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_21375 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO78_11185 glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D APECO78_11325 autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein D APECO78_11315 autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein D APECO78_11320 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein D APECO78_11310 autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein D APECO78_11300 autoinducer-2 (AI-2) kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D APECO78_11305 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D APECO78_11330 autoinducer 2 aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D APECO78_11335 autoinducer-2 (AI-2) modifying protein LsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D APECO78_10915 putative spermidine/putrescine transporter subunit K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D APECO78_10930 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D APECO78_10925 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D APECO78_10920 putative spermidine/putrescine transporter subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D APECO78_21070 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO78_21090 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO78_21065 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APECO78_21060 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D APECO78_21055 leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D APECO78_21050 leucine/isoleucine/valine transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D APECO78_13545 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO78_10300 RNase II stability modulator K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D APECO78_12825 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D APECO78_20580 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO78_01050 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D APECO78_10255 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APECO78_05580 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D APECO78_10950 inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APECO78_14405 multidrug resistance outer membrane protein MdtQ K18139 oprM; outer membrane protein, multidrug efflux system D APECO78_10075 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10530 Putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10080 oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APECO78_10085 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D APECO78_10090 oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D APECO78_10095 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO78_11160 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO78_18880 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO78_11155 binding-protein-dependent transport system inner membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D APECO78_11150 ATP-dependent peptide transporter membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APECO78_11145 D-ala-D-ala transporter subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D APECO78_11140 D-ala-D-ala transporter subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D APECO78_22395 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO78_00665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APECO78_19710 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APECO78_20290 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APECO78_05540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APECO78_03940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO78_21110 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO78_21890 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APECO78_16770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli [PATH:ecoa02026] D APECO78_15820 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO78_22860 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D APECO78_20580 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO78_13275 transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO78_13270 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO78_09320 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APECO78_13395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APECO78_13390 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APECO78_04165 DnaK transcriptional regulator DksA K06204 dksA; RNA polymerase-binding transcription factor D APECO78_17295 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D APECO78_14065 diguanylate cyclase K21084 yegE; diguanylate cyclase [EC:2.7.7.65] D APECO78_13565 diguanylate cyclase YedQ K21085 yedQ; diguanylate cyclase [EC:2.7.7.65] D APECO78_21415 cyclic-di-GMP phosphodiesterase K21086 pdeH; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_09835 YcgR protein K21087 ycgR; flagellar brake protein D APECO78_10585 hypothetical protein K21088 ydaM; diguanylate cyclase [EC:2.7.7.65] D APECO78_10300 RNase II stability modulator K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D APECO78_14345 transcriptional regulator MirA K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D APECO78_09170 DNA-binding transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D APECO78_09175 curlin minor subunit CsgB K04335 csgB; minor curlin subunit D APECO78_09180 major curlin subunit K04334 csgA; major curlin subunit D APECO78_09185 csgC; curli assembly protein CsgC K04336 csgC; curli production protein D APECO78_05430 hypothetical protein K18968 adrA; diguanylate cyclase [EC:2.7.7.65] D APECO78_12875 phosphodiesterase K21090 adrB; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_21455 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APECO78_17020 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APECO78_11305 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D APECO78_08905 putative polysaccharide export protein gfcE precursor K01991 wza; polysaccharide biosynthesis/export protein D APECO78_14040 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APECO78_13365 DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO78_17545 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO78_13350 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APECO78_17040 carbon storage regulator K03563 csrA; carbon storage regulator D APECO78_20945 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D APECO78_20940 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D APECO78_20875 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO78_20935 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO78_09105 outer membrane protein PgaA K11935 pgaA; biofilm PGA synthesis protein PgaA D APECO78_09100 outer membrane N-deacetylase K11931 pgaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-] D APECO78_09095 N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APECO78_09090 PGA biosynthesis protein K11937 pgaD; biofilm PGA synthesis protein PgaD D APECO78_00605 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D APECO78_19890 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO78_03455 two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APECO78_14925 hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO78_14915 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO78_14920 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APECO78_13545 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO78_17660 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APECO78_16110 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D APECO78_20810 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO78_20815 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ecoa02030] D APECO78_02930 methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APECO78_13245 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APECO78_10815 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APECO78_13240 methyl-accepting protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D APECO78_19165 aerotaxis sensor receptor K03776 aer; aerotaxis receptor D APECO78_00980 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APECO78_22645 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein D APECO78_14465 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D APECO78_21535 dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein D APECO78_13255 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO78_13250 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D APECO78_13225 chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO78_13220 chemotaxis regulator CheZ K03414 cheZ; chemotaxis protein CheZ D APECO78_13230 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO78_13235 chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APECO78_13485 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APECO78_13515 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D APECO78_13520 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APECO78_13265 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO78_04585 hypothetical protein K02557 motB; chemotaxis protein MotB D APECO78_13260 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ecoa02040] D APECO78_13475 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D APECO78_13480 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D APECO78_13485 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APECO78_13490 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D APECO78_13495 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APECO78_13500 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D APECO78_13505 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D APECO78_13510 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D APECO78_13515 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D APECO78_13520 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APECO78_13525 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D APECO78_13530 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D APECO78_13535 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APECO78_13540 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APECO78_13205 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D APECO78_04580 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO78_13210 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO78_13215 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D APECO78_09325 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D APECO78_09330 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D APECO78_09335 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D APECO78_09340 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D APECO78_09345 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D APECO78_09350 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D APECO78_09355 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D APECO78_09360 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D APECO78_09365 flagellar basal-body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D APECO78_09370 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D APECO78_09375 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D APECO78_09380 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D APECO78_13405 flagellin K02406 fliC; flagellin D APECO78_13410 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D APECO78_13415 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D APECO78_13420 flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT D APECO78_13265 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO78_04585 hypothetical protein K02557 motB; chemotaxis protein MotB D APECO78_13260 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D APECO78_09320 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APECO78_09315 flagella synthesis chaperone protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D APECO78_13385 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APECO78_13390 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APECO78_19145 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D APECO78_13275 transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO78_13270 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO78_19850 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D APECO78_13395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D APECO78_17510 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:ecoa04981] D APECO78_18270 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D APECO78_03700 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APECO78_16485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO78_17740 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APECO78_00840 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:ecoa04980] D APECO78_18300 membrane ATPase/protein kinase K07588 MMAA; GTPase [EC:3.6.5.-] D APECO78_18295 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO78_00840 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells D APECO78_05030 putative adhesin/invasin K13735 yeeJ; adhesin/invasin D APECO78_13700 hypothetical protein K13735 yeeJ; adhesin/invasin D APECO78_13705 hypothetical protein K13735 yeeJ; adhesin/invasin B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ecoa01501] D APECO78_08635 outer membrane protein F K09476 ompF; outer membrane pore protein F D APECO78_13605 hypothetical protein K09476 ompF; outer membrane pore protein F D APECO78_14910 outer membrane porin protein C K09475 ompC; outer membrane pore protein C D APECO78_05675 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D APECO78_09495 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D APECO78_01705 ampC; beta-lactamase/D-alanine carboxypeptidase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D APECO78_10075 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10530 Putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10080 oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APECO78_10085 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D APECO78_10090 oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D APECO78_10095 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO78_05835 acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D APECO78_05830 multidrug efflux system protein AcrB K18138 acrB; multidrug efflux pump D APECO78_14405 multidrug resistance outer membrane protein MdtQ K18139 oprM; outer membrane protein, multidrug efflux system D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_20770 mrcA; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO78_06755 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APECO78_03870 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ecoa01502] D APECO78_11165 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D APECO78_03910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_05405 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_01175 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APECO78_09815 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APECO78_03880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D APECO78_03885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APECO78_03900 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ecoa01503] D APECO78_09605 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO78_09610 DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO78_21540 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APECO78_06690 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APECO78_15085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO78_15090 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D APECO78_15095 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D APECO78_15100 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D APECO78_15105 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D APECO78_15110 polymyxin resistance protein PmrL K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D APECO78_15115 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D APECO78_15120 polymyxin resistance protein B K19238 pmrD; signal transduction protein PmrD D APECO78_01485 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO78_01490 two-component response regulator K07771 basR; two-component system, OmpR family, response regulator BasR D APECO78_01495 Putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APECO78_10345 antimicrobial peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D APECO78_10340 antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D APECO78_10335 antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D APECO78_10330 antimicrobial peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D APECO78_10325 antimicrobial peptide ABC system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D APECO78_04395 lipoprotein involved with copper homeostasis and adhesion K06079 cutF; copper homeostasis protein (lipoprotein) D APECO78_00315 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO78_00320 DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APECO78_01775 N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_15905 N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_17690 Putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_09525 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D APECO78_04245 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APECO78_00025 protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D APECO78_20610 peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APECO78_11405 Multiple antibiotic resistance protein marA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO78_05835 acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D APECO78_05830 multidrug efflux system protein AcrB K18138 acrB; multidrug efflux pump D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_04335 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ecoa01000] C 01001 Protein kinases [BR:ecoa01001] D APECO78_11285 regulator with hipB K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO78_08895 cryptic autophosphorylating protein tyrosine kinase Etk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO78_14030 tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO78_05505 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APECO78_09605 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO78_20810 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO78_11850 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APECO78_00315 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO78_03445 two-component system sensor kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D APECO78_14120 signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APECO78_01485 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO78_06425 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO78_18910 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO78_07005 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APECO78_08955 hybrid sensory histidine kinase TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D APECO78_19890 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO78_13620 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D APECO78_09995 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APECO78_16040 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APECO78_22190 sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D APECO78_14915 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO78_14925 hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO78_17545 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO78_15605 hybrid sensory histidine kinase in two-component regulatory system with EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D APECO78_06675 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D APECO78_01555 sensory histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APECO78_14340 sensory kinase in two-component system with YehT K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D APECO78_15655 hypothetical protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3] D APECO78_00080 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APECO78_00780 sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D APECO78_14930 sensory histidine kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D APECO78_16510 sensory histidine kinase GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO78_13255 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ecoa01009] D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D APECO78_03390 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ecoa01002] D APECO78_03595 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D APECO78_20465 bifunctional transmembrane prepilin leader peptidase/methylase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APECO78_06360 outer membrane protease K01355 ompT; omptin [EC:3.4.23.49] D APECO78_08860 hydrogenase 1 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D APECO78_18755 hybD; hydrogenase 2 maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D APECO78_17165 hydrogenase 3 maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D APECO78_16265 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D APECO78_10365 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D APECO78_14600 putative outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D APECO78_12095 lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D APECO78_12365 lipoprotein K13695 nlpC; probable lipoprotein NlpC D APECO78_15380 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D APECO78_19905 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APECO78_18945 hypothetical protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO78_22535 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO78_06905 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D APECO78_13615 chaperone protein HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D APECO78_19610 hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124] D APECO78_05630 hypothetical protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D APECO78_13745 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK D APECO78_12205 murein L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG D APECO78_07765 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D APECO78_09525 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D APECO78_08605 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D APECO78_08650 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D APECO78_21270 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D APECO78_11475 dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D APECO78_11165 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D APECO78_17710 protease K01407 ptrA; protease III [EC:3.4.24.55] D APECO78_11195 putative peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D APECO78_02270 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D APECO78_16345 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D APECO78_16055 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D APECO78_09595 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D APECO78_04615 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D APECO78_10570 putative peptidase, aminobenzoyl-glutamate utilization protein AbgA K12940 abgA; aminobenzoyl-glutamate utilization protein A D APECO78_10565 peptidase, aminobenzoyl-glutamate utilization protein AbgB K12941 abgB; aminobenzoyl-glutamate utilization protein B D APECO78_06075 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D APECO78_13095 peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D APECO78_04270 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D APECO78_23055 proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D APECO78_18255 proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D APECO78_15685 aminopeptidase K08326 ypdF; aminopeptidase [EC:3.4.11.-] D APECO78_17355 alkaline phosphatase isozyme conversion aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D APECO78_02785 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D APECO78_19730 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D APECO78_00245 peptidase K18530 frvX; putative aminopeptidase FrvX [EC:3.4.11.-] D APECO78_02640 hypothetical protein K20609 sgcX; putative aminopeptidase [EC:3.4.11.-] D APECO78_12950 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D APECO78_08525 putative heat shock protein K07387 K07387; metalloprotease [EC:3.4.24.-] D APECO78_18415 peptidase K07387 K07387; metalloprotease [EC:3.4.24.-] D APECO78_16195 peptidase, M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D APECO78_04310 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D APECO78_15460 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D APECO78_13655 DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase D APECO78_11795 putative peptidase K04775 ydgD; protease YdgD [EC:3.4.21.-] D APECO78_04245 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APECO78_19985 serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-] D APECO78_19990 serine endoprotease K04691 hhoB; serine protease DegS [EC:3.4.21.-] D APECO78_13035 protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D APECO78_06740 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_07865 D-alanyl-D-alanine carboxypeptidase fraction C K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_13785 dacD; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_14385 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D APECO78_05380 beta-lactam binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D APECO78_15880 periplasmic esterase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D APECO78_19750 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APECO78_05705 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D APECO78_05720 DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D APECO78_08765 peptidase, S16 (Lon protease) family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D APECO78_01035 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_03100 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_04730 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_06300 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_09780 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APECO78_16575 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D APECO78_12955 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D APECO78_02855 penicillin G acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D APECO78_12665 protease 4 K04773 sppA; protease IV [EC:3.4.21.-] D APECO78_10215 inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-] D APECO78_00850 (alpha)-aspartyl dipeptidase K05995 pepE; dipeptidase E [EC:3.4.13.21] D APECO78_20905 intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D APECO78_09825 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D APECO78_03180 putative capsid protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D APECO78_04815 phage pro-head protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D APECO78_00415 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D APECO78_07810 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APECO78_21005 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO78_14145 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D APECO78_10890 putative collagenase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D APECO78_19640 hypothetical protein K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D APECO78_19635 peptidase, U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D APECO78_02145 peptidase PmbA K03592 pmbA; PmbA protein D APECO78_20035 protease TldD K03568 tldD; TldD protein D APECO78_14880 ecotin K08276 eco; ecotin D APECO78_14970 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D APECO78_16330 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D APECO78_01805 FtsH protease regulator HflC K04087 hflC; modulator of FtsH protease HflC D APECO78_01800 FtsH protease regulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ecoa01003] D APECO78_20940 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D APECO78_21455 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APECO78_19880 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_16325 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APECO78_04185 penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APECO78_20770 mrcA; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO78_03895 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_06750 Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_14005 colanic acid biosynthesis glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D APECO78_14015 glycosyl transferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D APECO78_22820 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D APECO78_22810 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D APECO78_22765 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D APECO78_09215 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D APECO78_09095 N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APECO78_13285 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D APECO78_13950 colanic acid biosynthesis glycosyltransferase WcaL K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ecoa01005] D APECO78_04335 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D APECO78_04340 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D APECO78_03930 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D APECO78_04325 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D APECO78_06120 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D APECO78_08555 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D APECO78_09235 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D APECO78_13090 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D APECO78_15645 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D APECO78_14595 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D APECO78_21995 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D APECO78_15105 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D APECO78_06690 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APECO78_01495 Putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APECO78_21540 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APECO78_09950 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D APECO78_08570 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APECO78_19830 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D APECO78_19825 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO78_21945 ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D APECO78_21940 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D APECO78_21985 glucosyltransferase I RfaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO78_21920 glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D APECO78_21950 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D APECO78_21975 UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO78_21980 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D APECO78_21990 lipopolysaccharide core heptosyltransferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D APECO78_21970 lipopolysaccharide 1,2-glucosyltransferase K03276 waaR; UDP-glucose/galactose:(glucosyl)LPS alpha-1,2-glucosyl/galactosyltransferase [EC:2.4.1.-] D APECO78_21955 putative beta1,3-glucosyltransferase K12983 waaV; UDP-glucose:(glucosyl)LPS beta-1,3-glucosyltransferase [EC:2.4.1.-] D APECO78_21960 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-] D APECO78_21965 lipopolysaccharide core biosynthesis protein K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-] D APECO78_00565 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D APECO78_04550 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D APECO78_04445 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D APECO78_19070 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D APECO78_21935 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D APECO78_13935 hypothetical protein K26072 wejN; O78-antigen biosynthesis glycosyltransferase D APECO78_13930 putative glycosyl transferase K26073 wejO; O78-antigen biosynthesis glycosyltransferase D APECO78_13910 putative UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase K26074 wejQ; O78-antigen biosynthesis glycosyltransferase D APECO78_22815 common antigen polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D APECO78_13870 chain length determinant protein WzzB K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D APECO78_22765 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ecoa01011] D APECO78_19785 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APECO78_00640 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APECO78_03905 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D APECO78_03890 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APECO78_03875 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APECO78_03910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_05405 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO78_01175 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APECO78_09815 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APECO78_00635 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D APECO78_09825 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D APECO78_03885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APECO78_03900 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D APECO78_19095 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO78_07875 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO78_09310 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D APECO78_20770 mrcA; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO78_04185 penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APECO78_16325 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APECO78_06755 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APECO78_03870 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APECO78_06740 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_07865 D-alanyl-D-alanine carboxypeptidase fraction C K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_13785 dacD; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO78_19750 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APECO78_05380 beta-lactam binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D APECO78_15880 periplasmic esterase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D APECO78_14385 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D APECO78_19880 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_03895 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_06750 Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_13745 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK D APECO78_12205 murein L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG D APECO78_07765 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D APECO78_09525 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D APECO78_08605 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D APECO78_11165 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D APECO78_15460 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D APECO78_12095 lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D APECO78_14600 putative outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D APECO78_13095 peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D APECO78_03410 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D APECO78_17685 Membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D APECO78_17070 murein hydrolase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D APECO78_18555 mltC; murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D APECO78_04470 membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D APECO78_09830 emtA; lytic murein endotransglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D APECO78_16520 membrane-bound lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D APECO78_09445 putative thymidylate kinase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D APECO78_06745 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D APECO78_01775 N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_15905 N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_17690 Putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_08110 N-acetylmuramoyl-L-alanine amidase AmiD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_03990 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_12200 murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:ecoa01004] D APECO78_09125 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_09420 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO78_09415 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D APECO78_15435 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APECO78_09435 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APECO78_01985 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_09425 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO78_08760 hypothetical protein K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D APECO78_04330 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APECO78_10315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APECO78_05990 esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D APECO78_05785 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D APECO78_10130 acyl-CoA esterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D APECO78_05740 thioesterase superfamily protein K12500 tesC; thioesterase III [EC:3.1.2.-] D APECO78_01260 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO78_05195 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D APECO78_12330 short chain acyl-CoA synthetase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-] D APECO78_12825 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D APECO78_18665 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D APECO78_01025 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APECO78_09410 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D APECO78_19105 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APECO78_18870 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ecoa01008] D APECO78_06555 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D APECO78_06490 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D APECO78_06550 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D APECO78_06510 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D APECO78_06565 thioesterase K24147 entH; proofreading thioesterase EntH C 01006 Prenyltransferases [BR:ecoa01006] D APECO78_05615 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D APECO78_19775 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D APECO78_04300 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D APECO78_01785 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D APECO78_00405 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D APECO78_01020 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D APECO78_05650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ecoa01007] D APECO78_15745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO78_06940 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APECO78_04160 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D APECO78_12005 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO78_20710 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D APECO78_06130 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APECO78_13195 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO78_14285 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APECO78_03590 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APECO78_02260 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APECO78_06790 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO78_01580 lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO78_18165 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO78_13145 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO78_08640 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APECO78_16300 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APECO78_21605 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APECO78_21600 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APECO78_08235 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APECO78_04415 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APECO78_12420 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APECO78_17045 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APECO78_12395 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APECO78_12390 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APECO78_08625 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO78_21670 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D APECO78_15265 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO78_15650 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D APECO78_01180 tyrosine aminotransferase TyrB, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO78_06585 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D APECO78_13840 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO78_21930 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D APECO78_07550 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO78_18680 hypothetical protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO78_11920 bifunctional beta-cystathionase/maltose regulon regulatory protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO78_20590 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APECO78_12570 bifunctional succinylornithine transaminase/acetylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D APECO78_16900 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO78_10385 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D APECO78_19170 putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APECO78_07540 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D APECO78_04210 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D APECO78_22695 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO78_08515 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO78_15085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO78_22800 TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ecoa00194] D APECO78_22545 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D APECO78_22550 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D APECO78_22555 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D APECO78_22560 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D APECO78_22565 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D APECO78_22570 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D APECO78_22575 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D APECO78_22580 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APECO78_22585 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ecoa03000] D APECO78_02525 methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_13590 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_03770 arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D APECO78_02885 regulator of the 4HPA-hydroxylase operon K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D APECO78_00290 transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D APECO78_00285 transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D APECO78_12505 DNA-binding transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon D APECO78_01505 DNA-binding transcriptional activator AdiY K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA D APECO78_15915 transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D APECO78_06365 DNA-binding transcriptional activator EnvY K11920 envY; AraC family transcriptional regulator D APECO78_01225 DNA-binding transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO78_11405 Multiple antibiotic resistance protein marA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO78_03430 right oriC-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO78_10655 putative DNA-binding transcriptional dual regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D APECO78_05055 DNA-binding transcriptional regulator, ARAC-type K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon D APECO78_21365 DNA-binding transcriptional activator GadW K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator D APECO78_21370 DNA-binding transcriptional regulator GadX K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator D APECO78_01515 DNA-binding transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D APECO78_12745 DNA-binding transcriptional regulator, ARAC-type K25495 nimR; AraC family transcriptional regulator, regulator of nimT D APECO78_14900 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D APECO78_17660 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APECO78_22710 DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D APECO78_22970 DNA-binding transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D APECO78_03545 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D APECO78_00605 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D APECO78_18290 Chromosome initiation inhibitor K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D APECO78_03835 leuO; leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D APECO78_16415 DNA-binding transcriptional regulator HcaR K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator D APECO78_19425 DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator D APECO78_06015 DNA-binding transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon D APECO78_05210 DNA-binding transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D APECO78_10230 transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D APECO78_13735 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D APECO78_10575 DNA-binding transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D APECO78_12795 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D APECO78_13740 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D APECO78_02780 cell density-dependent motility repressor K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D APECO78_20030 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D APECO78_19110 transcriptional activator TtdR K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon D APECO78_22670 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D APECO78_10520 LysR family transcriptional regulator K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling D APECO78_07870 deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D APECO78_20900 DNA-binding transcriptional repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D APECO78_14160 galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor D APECO78_19490 DNA-binding transcriptional regulator AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D APECO78_17645 DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D APECO78_17100 DNA-binding transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D APECO78_01885 transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor D APECO78_00160 transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor D APECO78_05245 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D APECO78_14470 DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO78_17795 DNA-binding transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO78_21655 putative xyl operon regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO78_22655 transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO78_00425 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D APECO78_03850 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D APECO78_02175 trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D APECO78_17135 DNA-binding transcriptional repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor D APECO78_12115 DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D APECO78_20980 gluconate operon transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D APECO78_02290 L-idonate regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator D APECO78_19180 DNA-binding transcriptional repressor EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor D APECO78_11910 DNA-binding transcriptional repressor MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D APECO78_11440 transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D APECO78_22280 DNA-binding transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D APECO78_01435 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D APECO78_20665 DNA-binding transcriptional regulator FrlR K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D APECO78_07175 DNA-binding transcriptional repressor MngR K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D APECO78_18935 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D APECO78_09800 Fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D APECO78_04005 transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D APECO78_18660 DNA-binding transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D APECO78_02765 DNA-binding transcriptional repressor UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D APECO78_19310 DNA-binding transcriptional repressor ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D APECO78_21865 putative L-lactate dehydrogenase operon regulatory protein K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D APECO78_22335 DNA-binding transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D APECO78_19945 transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D APECO78_10965 colanic acid/biofilm transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator D APECO78_16910 GntR family transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D APECO78_11485 hypothetical protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D APECO78_02940 GntR family transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism D APECO78_05090 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D APECO78_05840 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D APECO78_22035 division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D APECO78_09055 RutR transcriptional dual regulator K09017 rutR; TetR/AcrR family transcriptional regulator D APECO78_12065 transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D APECO78_11900 repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D APECO78_20140 DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D APECO78_02220 TetR family transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D APECO78_09515 hypothetical protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D APECO78_00615 putative transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D APECO78_01990 putative transcriptional regulator K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator D APECO78_07650 DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D APECO78_07900 putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D APECO78_22605 hypothetical protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D APECO78_08215 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APECO78_05760 LRP-like transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D APECO78_13365 DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO78_05000 transcriptional regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator D APECO78_13545 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO78_09170 DNA-binding transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D APECO78_21315 hypothetical protein K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator D APECO78_02985 LuxR family transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D APECO78_20880 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D APECO78_21340 DNA-binding transcriptional activator K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator D APECO78_11400 DNA-binding transcriptional repressor MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D APECO78_12030 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D APECO78_17005 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D APECO78_05955 DNA-binding transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D APECO78_20250 zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D APECO78_01230 redox-sensitivie transcriptional activator Soxr K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D APECO78_14345 transcriptional regulator MirA K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D APECO78_09655 MerR family transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D APECO78_06955 ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D APECO78_01050 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D APECO78_00835 Acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D APECO78_05250 DNA-binding transcriptional activator MhpR K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator D APECO78_06025 DNA-binding transcriptional repressor AllR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons D APECO78_12940 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D APECO78_21685 DNA-binding transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor D APECO78_20580 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO78_10550 fumarate/nitrate reduction transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D APECO78_14535 DNA-binding transcriptional activator YeiL K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D APECO78_16385 DNA-binding transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D APECO78_01820 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D APECO78_21290 DNA-binding transcriptional repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D APECO78_10885 DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D APECO78_07755 manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D APECO78_01370 DNA-binding transcriptional repressor RpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D APECO78_15865 transcriptional regulator MurR K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor D APECO78_13080 DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D APECO78_00645 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APECO78_20125 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APECO78_03415 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D APECO78_05175 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D APECO78_13675 transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator D APECO78_19780 DNA-binding transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator D APECO78_03795 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D APECO78_03400 bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APECO78_18885 HTH-type transcriptional regulator ygiT K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D APECO78_10370 DNA-binding transcriptional repressor PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D APECO78_11290 antitoxin HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO78_17150 HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APECO78_19215 DNA-binding transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APECO78_16180 DNA-binding transcriptional activator, formate sensing K12146 hyfR; hydrogenase-4 transcriptional activator D APECO78_17110 anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D APECO78_17240 formate hydrogenlyase transcriptional activator FhlA K15836 fhlA; formate hydrogenlyase transcriptional activator D APECO78_04250 carbohydrate diacid transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator D APECO78_07300 DNA-binding transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein D APECO78_21585 transcriptional regulator K07726 K07726; putative transcriptional regulator D APECO78_21195 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D APECO78_00470 Transcriptional repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D APECO78_09060 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APECO78_22485 transcriptional antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator D APECO78_00240 frv operon regulatory protein K18531 frvR; putative frv operon regulatory protein D APECO78_05305 regulator protein FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D APECO78_14240 transcriptional repressor RcnR to maintain nickel and cobalt homeostasis K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D APECO78_05685 regulator of murein genes K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D APECO78_16830 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO78_23030 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH D APECO78_20000 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D APECO78_06920 N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor D APECO78_11770 DNA-binding transcriptional repressor DgsA K15545 mlc; transcriptional regulator of PTS gene D APECO78_21835 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor D APECO78_10490 DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D APECO78_01600 DNA-binding transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon D APECO78_17875 transcriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1 D APECO78_17890 transcriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1 D APECO78_16110 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D APECO78_10730 DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D APECO78_10390 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D APECO78_10405 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C D APECO78_11305 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D APECO78_09870 DNA-binding transcriptional regulator DhaR K05880 dhaR; transcriptional activator for dhaKLM operon D APECO78_06630 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D APECO78_18475 hypothetical protein K07735 algH; putative transcriptional regulator D APECO78_03630 DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF D APECO78_04165 DnaK transcriptional regulator DksA K06204 dksA; RNA polymerase-binding transcription factor D APECO78_05575 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D APECO78_04630 DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl D APECO78_20895 transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR D APECO78_03855 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ D APECO78_18895 transcriptional regulator K07471 ygiV; probable transcriptional regulator C 03021 Transcription machinery [BR:ecoa03021] D APECO78_20265 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APECO78_00695 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APECO78_00700 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APECO78_22085 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D APECO78_19145 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D APECO78_17295 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D APECO78_16600 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D APECO78_02425 RNA polymerase sigma factor FecI K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D APECO78_21095 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D APECO78_19850 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D APECO78_13395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APECO78_03745 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D APECO78_19690 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D APECO78_05590 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D APECO78_00670 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D APECO78_19960 stringent starvation protein A K03599 sspA; stringent starvation protein A D APECO78_19955 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D APECO78_16595 anti-RNA polymerase sigma factor SigE K03597 rseA; sigma-E factor negative regulatory protein RseA D APECO78_16590 anti-sigma E factor K03598 rseB; sigma-E factor negative regulatory protein RseB D APECO78_16585 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D APECO78_04165 DnaK transcriptional regulator DksA K06204 dksA; RNA polymerase-binding transcription factor D APECO78_19745 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D APECO78_20820 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D APECO78_22755 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APECO78_04375 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:ecoa03019] D APECO78_09385 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D APECO78_20045 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D APECO78_16570 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO78_01825 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APECO78_01755 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D APECO78_22740 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D APECO78_07655 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D APECO78_19655 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APECO78_22940 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APECO78_17510 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO78_19665 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APECO78_22755 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APECO78_00335 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO78_03520 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO78_01655 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO78_01790 RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO78_16230 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APECO78_04155 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D APECO78_17755 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D APECO78_17040 carbon storage regulator K03563 csrA; carbon storage regulator D APECO78_20075 regulatory protein CsrD K18765 csrD; RNase E specificity factor CsrD D APECO78_00400 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D APECO78_02245 RNase E inhibitor protein K09893 rraB; regulator of ribonuclease activity B D APECO78_19865 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D APECO78_10780 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D APECO78_04180 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ecoa03011] D APECO78_08535 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D APECO78_04275 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D APECO78_20360 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D APECO78_20270 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D APECO78_20305 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D APECO78_01930 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D APECO78_20495 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D APECO78_20320 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D APECO78_19965 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D APECO78_20395 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D APECO78_20275 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D APECO78_20500 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D APECO78_20280 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D APECO78_20325 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D APECO78_19670 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D APECO78_16765 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D APECO78_20345 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D APECO78_01940 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D APECO78_20370 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D APECO78_03575 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D APECO78_19135 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D APECO78_00680 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D APECO78_20375 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D APECO78_20390 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D APECO78_20385 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D APECO78_20330 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D APECO78_20315 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D APECO78_01945 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D APECO78_00685 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D APECO78_00675 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D APECO78_00690 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D APECO78_19970 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D APECO78_20340 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D APECO78_20295 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D APECO78_20355 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D APECO78_20260 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D APECO78_20310 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D APECO78_16750 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D APECO78_12405 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D APECO78_19770 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D APECO78_20365 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D APECO78_20380 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D APECO78_20335 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D APECO78_19765 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D APECO78_22015 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D APECO78_20350 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D APECO78_20300 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D APECO78_00435 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D APECO78_05015 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D APECO78_09405 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D APECO78_22010 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D APECO78_22380 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D APECO78_12410 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D APECO78_05010 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D APECO78_20285 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D APECO78_14650 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D APECO78_r23267 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23271 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23273 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23275 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23277 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23279 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23281 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23283 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23285 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23287 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23289 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23253 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23255 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23257 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23263 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:ecoa03009] D APECO78_16570 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO78_01755 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D APECO78_16565 GTP-binding protein Era K03595 era; GTPase D APECO78_19755 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D APECO78_04165 DnaK transcriptional regulator DksA K06204 dksA; RNA polymerase-binding transcription factor D APECO78_19690 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D APECO78_05590 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D APECO78_00670 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D APECO78_14640 16S rRNA pseudouridylate synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D APECO78_03715 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D APECO78_20230 16S rRNA methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D APECO78_03000 rsmC; 16S ribosomal RNA m2G1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D APECO78_21115 rsmD; 16S rRNA m(2)G966-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D APECO78_18465 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D APECO78_12980 yebU; rRNA (cytosine-C(5)-)-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D APECO78_22590 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D APECO78_03860 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D APECO78_19575 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D APECO78_21265 methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D APECO78_12910 rrmA; 23S rRNA methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D APECO78_01830 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D APECO78_19735 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D APECO78_07705 23S rRNA mA1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D APECO78_19225 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D APECO78_06760 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D APECO78_08825 23S rRNA m(5)C1962 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D APECO78_21275 DNA processing protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D APECO78_08730 rlmL; 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D APECO78_17650 23S rRNA C2498 ribose 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D APECO78_16315 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D APECO78_17540 rumA; 23S rRNA m(5)U1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D APECO78_08070 rumB; 23S rRNA methyluridine methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D APECO78_03740 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APECO78_10200 23S rRNA pseudouridylate synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D APECO78_09390 23S rRNA pseudouridylate synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D APECO78_16700 23S rRNA pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D APECO78_09635 23S rRNA pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D APECO78_00895 23S rRNA pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D APECO78_16650 rRNA methylase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D APECO78_03010 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D APECO78_09295 ribosomal-protein-S5-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D APECO78_08035 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D APECO78_10845 ribosomal-protein-L7/L12-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D APECO78_16760 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D APECO78_07845 30S ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D APECO78_08505 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D APECO78_20115 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D APECO78_15470 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D APECO78_09600 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D APECO78_09385 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D APECO78_20045 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D APECO78_18480 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D APECO78_10600 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D APECO78_19655 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APECO78_16620 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D APECO78_01750 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D APECO78_16285 GTP-binding protein Der K03977 engA; GTPase D APECO78_01795 GTPase HflX K03665 hflX; GTPase D APECO78_20200 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D APECO78_22090 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D APECO78_19680 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D APECO78_19695 hypothetical protein K09748 rimP; ribosome maturation factor RimP D APECO78_06140 hypothetical protein K14761 rlbA; ribosome-associated protein D APECO78_06765 ribosome-associated protein K09710 ybeB; ribosome-associated protein D APECO78_06885 hypothetical protein K07042 ybeY; probable rRNA maturation factor D APECO78_19740 RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D APECO78_21845 hypothetical protein K14762 yibL; ribosome-associated protein D APECO78_02140 hypothetical protein K09889 yjgA; ribosome-associated protein D APECO78_08755 ribosome modulation factor K03812 rmf; ribosome modulation factor D APECO78_19855 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor D APECO78_16710 translation inhibitor protein RaiA K05809 raiA; ribosome-associated inhibitor A D APECO78_11125 30S ribosomal subunit S22 K02972 sra; stationary-phase-induced ribosome-associated protein D APECO78_09890 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D APECO78_09400 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ecoa03016] D APECO78_15165 ribonuclease BN K00784 rnz; ribonuclease Z [EC:3.1.26.11] D APECO78_19090 multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D APECO78_20890 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D APECO78_15745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO78_04415 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APECO78_03590 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APECO78_06790 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO78_14285 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APECO78_06940 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APECO78_13195 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO78_01580 lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO78_18165 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO78_13145 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO78_17045 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APECO78_08640 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APECO78_12420 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APECO78_08235 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APECO78_06130 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APECO78_02260 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APECO78_16300 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APECO78_12395 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APECO78_12390 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APECO78_12005 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO78_20710 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D APECO78_00175 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D APECO78_09475 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D APECO78_18540 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D APECO78_04420 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D APECO78_15410 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D APECO78_19675 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D APECO78_17315 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D APECO78_16380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO78_20200 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D APECO78_01785 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D APECO78_22400 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D APECO78_22595 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D APECO78_12655 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D APECO78_02050 adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D APECO78_22385 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D APECO78_12080 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D APECO78_22050 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D APECO78_06635 ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21] D APECO78_10305 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D APECO78_12820 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D APECO78_04175 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D APECO78_02800 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D APECO78_03405 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D APECO78_21605 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APECO78_21600 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APECO78_04160 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D APECO78_05925 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D APECO78_12730 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D APECO78_16525 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D APECO78_01155 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D APECO78_20120 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D APECO78_14415 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D APECO78_06895 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D APECO78_13165 tRNA cmo(5)U34 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D APECO78_13170 tRNA mo(5)U34 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D APECO78_08585 putative metallothionein SmtA K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D APECO78_03460 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D APECO78_00625 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D APECO78_16755 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D APECO78_16650 rRNA methylase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D APECO78_22095 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D APECO78_16390 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D APECO78_21875 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D APECO78_16615 putative S-adenosyl-L-methionine-dependent methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D APECO78_17570 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D APECO78_03740 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APECO78_09625 trmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D APECO78_10605 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D APECO78_21140 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D APECO78_20505 sulfur transfer complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D APECO78_20510 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D APECO78_20515 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D APECO78_08835 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D APECO78_16370 iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein D APECO78_18205 global regulator K06980 ygfZ; tRNA-modifying protein YgfZ D APECO78_15440 mnmC; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D APECO78_05530 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D APECO78_05745 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D APECO78_17435 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D APECO78_17490 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D APECO78_17590 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D APECO78_01760 Fe-S electron transport protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D APECO78_06010 tRNA 2-selenouridine synthase SelU K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D APECO78_05535 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D APECO78_05625 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APECO78_04370 tilS; tRNA(Ile)-lysidine ligase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D APECO78_16070 methionine tRNA cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D APECO78_12835 peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D APECO78_19130 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D APECO78_01770 ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D APECO78_17680 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D APECO78_01825 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APECO78_19665 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APECO78_16080 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:ecoa03012] D APECO78_10280 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D APECO78_19685 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D APECO78_12415 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D APECO78_20555 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D APECO78_04280 elongation factor Ts K02357 tsf; elongation factor Ts D APECO78_00660 elongation factor Tu K02358 tuf; elongation factor Tu D APECO78_20485 Elongation factor Tu K02358 tuf; elongation factor Tu D APECO78_20490 elongation factor G K02355 fusA; elongation factor G D APECO78_21770 selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor D APECO78_09930 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D APECO78_04290 ribosome recycling factor K02838 frr; ribosome recycling factor D APECO78_09935 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D APECO78_09895 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D APECO78_08190 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D APECO78_01680 elongation factor P K02356 efp; elongation factor P D APECO78_14580 elongation factor P K02356 efp; elongation factor P D APECO78_01730 EF-P-lysine aminoacylase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D APECO78_01675 KamA family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D APECO78_15450 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D APECO78_18170 peptide chain release factor RF2 K02836 prfB; peptide chain release factor 2 D APECO78_03310 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D APECO78_20245 hypothetical protein K09890 arfA; alternative ribosome-rescue factor D APECO78_04390 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:ecoa03110] D APECO78_08185 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D APECO78_16690 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D APECO78_05715 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D APECO78_00410 ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D APECO78_03520 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO78_16360 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D APECO78_14075 chaperone K04046 yegD; hypothetical chaperone protein D APECO78_01655 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO78_03525 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D APECO78_08990 curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein D APECO78_03735 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein D APECO78_16365 DnaJ-like molecular chaperone specific for IscU K04082 hscB; molecular chaperone HscB D APECO78_20795 Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33 D APECO78_16785 heat shock protein K03687 GRPE; molecular chaperone GrpE D APECO78_22295 small heat shock protein A K04080 ibpA; molecular chaperone IbpA D APECO78_22290 small heat shock protein B K04081 ibpB; molecular chaperone IbpB D APECO78_20790 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D APECO78_01650 co-chaperonin GroES K04078 groES; chaperonin GroES D APECO78_04245 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APECO78_19730 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D APECO78_22580 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APECO78_02720 chaperone FimC, periplasmic K07346 fimC; fimbrial chaperone protein D APECO78_08685 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_11270 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_19560 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_22525 lfpB; fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_21890 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APECO78_00325 cpxP; periplasmic repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy D APECO78_12545 periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy D APECO78_00775 zraP; zinc resistance protein K07803 zraP; zinc resistance-associated protein D APECO78_21330 acid-resistance protein K19777 hdeA; acid stress chaperone HdeA D APECO78_21325 hdeB; acid-resistance protein K19778 hdeB; acid stress chaperone HdeB D APECO78_17215 hypA; hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D APECO78_18745 hydrogenase nickel incorporation protein HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D APECO78_17220 guanine-nucleotide binding protein in formate-hydrogenlyase system K04652 hypB; hydrogenase nickel incorporation protein HypB D APECO78_08980 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO78_11755 Twin-arginine leader-binding protein dmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D APECO78_20610 peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APECO78_06125 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D APECO78_05730 periplasmic folding chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D APECO78_20525 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D APECO78_02000 peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D APECO78_03600 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D APECO78_20535 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D APECO78_22720 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D APECO78_03725 peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D APECO78_22745 trxA; thioredoxin K03671 TXN; thioredoxin D APECO78_16655 thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D APECO78_05980 thioredoxin-like protein K05838 ybbN; putative thioredoxin D APECO78_08020 Glutaredoxin 1 K03674 grxA; glutaredoxin 1 D APECO78_09285 glutaredoxin K03675 grxB; glutaredoxin 2 D APECO78_21895 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D APECO78_12090 glutaredoxin-4 K07390 grxD; monothiol glutaredoxin D APECO78_00025 protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D APECO78_09790 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D APECO78_18180 protein disulfide isomerase II DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APECO78_01620 dipZ; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D APECO78_14805 thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D APECO78_06605 dsbG; disulfide isomerase/thiol-disulfide oxidase K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:ecoa04131] D APECO78_16320 mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APECO78_19065 hypothetical protein K07192 FLOT; flotillin D APECO78_10795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_12690 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_07270 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_12195 Pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_13085 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:ecoa04121] C 03051 Proteasome [BR:ecoa03051] D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ecoa03032] D APECO78_04485 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D APECO78_02525 methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_13590 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_00765 transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha D APECO78_05725 transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta D APECO78_12385 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D APECO78_08540 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D APECO78_22375 DNA replication initiation factor K02313 dnaA; chromosomal replication initiator protein D APECO78_01170 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APECO78_02960 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D APECO78_19140 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D APECO78_01210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO78_04350 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO78_22370 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO78_02265 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO78_06780 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO78_09455 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO78_04490 DNA polymerase III, epsilon subunit-related 3-5 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO78_05870 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO78_03005 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APECO78_13020 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APECO78_04345 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D APECO78_00045 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO78_15790 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_22070 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_11855 inhibitor of replication at Ter, DNA-binding protein K10748 tus; DNA replication terminus site-binding protein D APECO78_07950 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_20725 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_06980 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D APECO78_16205 DNA replication initiation factor K10763 hda; DnaA-homolog protein D APECO78_14985 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D APECO78_22360 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D APECO78_18875 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APECO78_18970 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APECO78_10225 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D APECO78_12650 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ecoa03036] D APECO78_02525 methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_13590 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_16570 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO78_19065 hypothetical protein K07192 FLOT; flotillin D APECO78_10055 global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS D APECO78_16935 DNA binding protein K11685 stpA; DNA-binding protein StpA D APECO78_00765 transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha D APECO78_05725 transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta D APECO78_12385 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D APECO78_08540 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D APECO78_08990 curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein D APECO78_08985 chaperone-modulator protein CbpM K18997 cbpM; chaperone modulatory protein CbpM D APECO78_03430 right oriC-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO78_22375 DNA replication initiation factor K02313 dnaA; chromosomal replication initiator protein D APECO78_19590 DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein D APECO78_08820 heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D APECO78_07730 Global regulator, starvation conditions K04047 dps; starvation-inducible DNA-binding protein D APECO78_20125 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APECO78_01790 RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO78_18290 Chromosome initiation inhibitor K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D APECO78_08215 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APECO78_14655 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein D APECO78_08600 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB D APECO78_08595 condesin subunit E K03804 mukE; chromosome partition protein MukE D APECO78_08590 condesin subunit F K03633 mukF; chromosome partition protein MukF D APECO78_03920 cell division protein FtsA K03590 ftsA; cell division protein FtsA D APECO78_17330 cell division protein FtsB K05589 ftsB; cell division protein FtsB D APECO78_21105 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APECO78_03870 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APECO78_08220 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D APECO78_03865 cell division protein FtsL K03586 ftsL; cell division protein FtsL D APECO78_00420 essential cell division protein FtsN K03591 ftsN; cell division protein FtsN D APECO78_03915 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D APECO78_03895 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_21100 cell division protein K09811 ftsX; cell division transport system permease protein D APECO78_03925 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APECO78_15795 cell division protein ZipA K03528 zipA; cell division protein ZipA D APECO78_18265 Z-ring-associated protein K09888 zapA; cell division protein ZapA D APECO78_00395 hypothetical protein K09892 zapB; cell division protein ZapB D APECO78_08720 hypothetical protein K18657 zapC; cell division protein ZapC D APECO78_03955 hypothetical protein K18778 zapD; cell division protein ZapD D APECO78_19975 hypothetical protein K06916 zapE; cell division protein ZapE D APECO78_01995 cell envelope opacity-associated protein K07269 ytfB; cell division protein YtfB D APECO78_01775 N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_15905 N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_17690 Putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO78_05835 acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D APECO78_09730 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D APECO78_09725 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D APECO78_09720 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D APECO78_08780 SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA D APECO78_22035 division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D APECO78_06980 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D APECO78_20070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APECO78_20065 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D APECO78_20055 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D APECO78_06750 Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_16830 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO78_18875 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APECO78_18970 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APECO78_22595 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D APECO78_22590 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D APECO78_22890 site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D APECO78_18185 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D APECO78_14280 antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D APECO78_20600 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D APECO78_00050 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ecoa03400] D APECO78_10555 O-6-alkylguanine-DNA:cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D APECO78_07065 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D APECO78_16645 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D APECO78_18545 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D APECO78_11980 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D APECO78_03945 Mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D APECO78_22030 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D APECO78_14900 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D APECO78_14895 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D APECO78_19150 G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D APECO78_14070 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D APECO78_21555 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D APECO78_22005 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D APECO78_07095 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D APECO78_12580 exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D APECO78_14515 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D APECO78_00755 endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D APECO78_18175 ssDNA exonuclease, 5' -> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO78_15790 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_22070 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO78_00045 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO78_01205 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D APECO78_07565 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D APECO78_13345 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D APECO78_12535 nucleotide excision repair endonuclease K05984 cho; excinuclease Cho [EC:3.1.25.-] D APECO78_22900 DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO78_00695 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APECO78_00700 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APECO78_20265 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APECO78_22085 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D APECO78_09530 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D APECO78_17255 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D APECO78_01780 MutL, subunit of MutHLS complex, methyl-directed mismatch repair K03572 mutL; DNA mismatch repair protein MutL D APECO78_17765 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH D APECO78_13790 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D APECO78_16275 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D APECO78_05620 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D APECO78_13030 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D APECO78_04350 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO78_22370 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO78_02265 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO78_06780 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO78_09455 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO78_04490 DNA polymerase III, epsilon subunit-related 3-5 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO78_05870 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO78_03005 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APECO78_13020 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APECO78_01210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO78_07950 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_20725 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_13585 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D APECO78_17705 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D APECO78_17715 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D APECO78_17700 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D APECO78_17060 recombinase A K03553 recA; recombination protein RecA D APECO78_13120 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D APECO78_13115 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D APECO78_13130 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D APECO78_03105 holliday junction resolvase K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO78_04735 crossover junction endodeoxyribonuclease (holliday junction resolvase) K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO78_06295 crossover junction endodeoxyribonuclease (holliday junction resolvase) K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO78_00430 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D APECO78_01935 primosomal replication protein N K02686 priB; primosomal replication protein N D APECO78_05855 primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D APECO78_02965 Primosomal protein 1 K02317 dnaT; DNA replication protein DnaT D APECO78_05490 exonuclease subunit SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D APECO78_05495 Nuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D APECO78_03395 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D APECO78_22365 recombination protein F K03629 recF; DNA replication and repair protein RecF D APECO78_22100 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D APECO78_16560 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D APECO78_05880 recombination protein RecR K06187 recR; recombination protein RecR D APECO78_16795 recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D APECO78_05475 nonspecific DNA binding protein K03554 rdgC; recombination associated protein RdgC D APECO78_17375 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D APECO78_14645 putative ATP-dependent helicase K19789 radD; DNA repair protein RadD D APECO78_02285 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D APECO78_14985 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D APECO78_22360 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D APECO78_10225 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D APECO78_00765 transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha D APECO78_05725 transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta D APECO78_20125 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APECO78_12385 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D APECO78_08540 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D APECO78_22940 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APECO78_10055 global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS D APECO78_04590 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D APECO78_09785 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D APECO78_09780 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APECO78_01035 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_03100 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_04730 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_06300 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO78_03750 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D APECO78_22060 DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D D APECO78_01145 DNA-damage-inducible protein K12149 dinI; DNA-damage-inducible protein I D APECO78_03305 DNA-damage-inducible protein K12149 dinI; DNA-damage-inducible protein I D APECO78_09270 DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D APECO78_17055 recX; recombination regulator RecX K03565 recX; regulatory protein D APECO78_20845 transposase K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-] D APECO78_15345 putative transposase K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-] D APECO78_04100 putative transposase K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-] D APECO78_02840 hypothetical protein K24089 rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-] D APECO78_15055 hypothetical protein K24090 rpnE; recombination-promoting nuclease RpnE D APECO78_22730 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D APECO78_08800 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D APECO78_07665 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D APECO78_12840 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D APECO78_12085 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D APECO78_15000 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO78_16965 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO78_15005 putative ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO78_16970 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ecoa03029] D APECO78_19685 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D APECO78_12415 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D APECO78_04280 elongation factor Ts K02357 tsf; elongation factor Ts D APECO78_00660 elongation factor Tu K02358 tuf; elongation factor Tu D APECO78_20485 Elongation factor Tu K02358 tuf; elongation factor Tu D APECO78_20490 elongation factor G K02355 fusA; elongation factor G D APECO78_16565 GTP-binding protein Era K03595 era; GTPase D APECO78_12005 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO78_06790 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO78_13145 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO78_13195 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO78_01210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO78_04315 outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family D APECO78_03520 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO78_16785 heat shock protein K03687 GRPE; molecular chaperone GrpE D APECO78_01655 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO78_01650 co-chaperonin GroES K04078 groES; chaperonin GroES D APECO78_03525 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D APECO78_16380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO78_16365 DnaJ-like molecular chaperone specific for IscU K04082 hscB; molecular chaperone HscB D APECO78_12090 glutaredoxin-4 K07390 grxD; monothiol glutaredoxin D APECO78_14280 antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D APECO78_05650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D APECO78_22395 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ecoa02000] D APECO78_08550 lipid transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D APECO78_05765 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO78_05770 multidrug transporter membrane\ATP-binding components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO78_08200 cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D APECO78_08205 cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D APECO78_08170 macrolide ABC transporter ATP-binding protein/membrane protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APECO78_14890 ABC transporter ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D APECO78_11205 putative ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D APECO78_08735 ABC transporter ATPase component K15738 uup; ABC transport system ATP-binding/permease protein D APECO78_15855 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APECO78_00340 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APECO78_15850 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D APECO78_15845 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D APECO78_15840 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APECO78_07310 modA; molybdate transporter periplasmic protein K02020 modA; molybdate transport system substrate-binding protein D APECO78_07315 modB; molybdate ABC transporter permease protein K02018 modB; molybdate transport system permease protein D APECO78_07320 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D APECO78_07295 molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D APECO78_05330 tauA; taurine transporter substrate binding subunit K15551 tauA; taurine transport system substrate-binding protein D APECO78_05340 taurine transporter subunit K15552 tauC; taurine transport system permease protein D APECO78_05335 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APECO78_08670 alkanesulfonate transporter subunit K15553 ssuA; sulfonate transport system substrate-binding protein D APECO78_08660 alkanesulfonate transporter permease K15554 ssuC; sulfonate transport system permease protein D APECO78_08655 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APECO78_03790 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D APECO78_03785 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein D APECO78_03780 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D APECO78_09575 spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein D APECO78_09580 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D APECO78_09585 potB; spermidine/putrescine ABC transporter membrane protein K11071 potB; spermidine/putrescine transport system permease protein D APECO78_09590 putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D APECO78_08045 putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein D APECO78_08060 putrescine transporter subunit: membrane component of ABC superfamily K11074 potI; putrescine transport system permease protein D APECO78_08055 putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein D APECO78_08050 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D APECO78_10915 putative spermidine/putrescine transporter subunit K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D APECO78_10930 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D APECO78_10925 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D APECO78_10920 putative spermidine/putrescine transporter subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D APECO78_16985 glycine betaine transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein D APECO78_16980 glycine betaine transporter membrane protein K02001 proW; glycine betaine/proline transport system permease protein D APECO78_16975 Glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D APECO78_14370 transporter subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D APECO78_14355 quaternare amine family ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D APECO78_14365 binding-protein-dependent transport system inner membrane protein K05846 opuBD; osmoprotectant transport system permease protein D APECO78_14360 putative ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APECO78_12605 hypothetical protein K05777 ynjB; putative thiamine transport system substrate-binding protein D APECO78_12610 fused transporter subunits of ABC superfamily: membrane component K05778 ynjC; putative thiamine transport system permease protein D APECO78_12615 ABC transporter ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein D APECO78_00980 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APECO78_00975 maltose transport system permease protein malF K10109 malF; maltose/maltodextrin transport system permease protein D APECO78_00970 maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein D APECO78_00990 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO78_10465 sugar transporter subunit K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO78_13305 L-arabinose ABC transporter substrate binding component K10537 araF; L-arabinose transport system substrate-binding protein D APECO78_13295 araH; L-arabinose transporter permease protein K10538 araH; L-arabinose transport system permease protein D APECO78_13300 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D APECO78_14465 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D APECO78_14455 beta-methylgalactoside transporter inner membrane protein K10541 mglC; methyl-galactoside transport system permease protein D APECO78_14460 galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D APECO78_21640 xylF; D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D APECO78_21650 putative membrane component of xylose transport system K10544 xylH; D-xylose transport system permease protein D APECO78_21645 xylose transporter ATP-binding subunit K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D APECO78_16470 sugar ABC transporter substrate-binding protein K23545 yphF; sugar transport system substrate-binding protein D APECO78_16460 putative sugar transporter subunit, membrane component of ABC superfamily protein K23546 yphD; sugar transport system permease protein D APECO78_16465 putative sugar ABC transporter ATP-binding protein K23547 yphE; sugar transport system ATP-binding protein D APECO78_01365 D-allose transporter subunit K10549 alsB; D-allose transport system substrate-binding protein D APECO78_01355 D-allose transporter subunit K10550 alsC; D-allose transport system permease protein D APECO78_01360 D-allose transporter ATP-binding protein K10551 alsA; D-allose transport system ATP-binding protein [EC:7.5.2.8] D APECO78_22645 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein D APECO78_22640 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D APECO78_22635 D-ribose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APECO78_02110 sugar transporter subunit K23508 ytfQ; galactofuranose transport system substrate-binding protein D APECO78_02120 putative sugar transporter subunit K23509 ytfT; galactofuranose transport system permease protein D APECO78_02125 inner membrane ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D APECO78_02115 putative sugar transporter subunit K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D APECO78_21035 glycerol-3-phosphate transporter periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D APECO78_21030 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D APECO78_21025 glycerol-3-phosphate transporter membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D APECO78_21020 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D APECO78_05975 metal resistance protein K02069 STAR2; UDP-glucose/iron transport system permease protein D APECO78_05970 putative ABC transporter ATP-binding protein YbbL K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D APECO78_11325 autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein D APECO78_11315 autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein D APECO78_11320 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein D APECO78_11310 autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein D APECO78_19805 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D APECO78_19810 toluene ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D APECO78_19815 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D APECO78_19800 ABC transporter substrate-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D APECO78_19795 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D APECO78_10425 sugar transporter subunit K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D APECO78_10430 sugar transporter subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D APECO78_10435 sugar transporter subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein D APECO78_22510 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D APECO78_22505 phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D APECO78_22500 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D APECO78_22495 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D APECO78_01445 alkylphosphonate ABC transporter periplasmic phosphonates-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D APECO78_01440 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D APECO78_01450 phosphonate ABC transporter ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D APECO78_15370 ABC transporter lysine/arginine/ornithine binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APECO78_15355 histidine/lysine/arginine/ornithine ABC transporter permease HisM K10015 hisM; histidine transport system permease protein D APECO78_15360 histidine/lysine/arginine/ornithine ABC transporter permease HisQ K10016 hisQ; histidine transport system permease protein D APECO78_15350 histidine/lysine/arginine/ornithine transporter subunit K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_15365 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D APECO78_07725 glutamine ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein D APECO78_07720 glutamine ABC transporter permease K10037 glnP; glutamine transport system permease protein D APECO78_07715 glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_08075 arginine 3rd transport system periplasmic binding protein ArtJ K09996 artJ; arginine transport system substrate-binding protein D APECO78_08090 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D APECO78_08080 arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D APECO78_08085 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D APECO78_08095 arginine transport system ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_06865 glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APECO78_06855 glutamate/aspartate transport system permease GltK K10002 gltK; glutamate/aspartate transport system permease protein D APECO78_06860 glutamate/aspartate ABC transporter permease component K10003 gltJ; glutamate/aspartate transport system permease protein D APECO78_06850 glutamate/aspartate transport ATP-binding protein gltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APECO78_20160 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D APECO78_20165 putative amino-acid transporter subunit K09970 aapQ; general L-amino acid transport system permease protein D APECO78_20170 transport system permease K09971 aapM; general L-amino acid transport system permease protein D APECO78_20175 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D APECO78_13385 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APECO78_13375 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D APECO78_13370 amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D APECO78_21070 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO78_21090 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO78_21065 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APECO78_21060 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D APECO78_21055 leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D APECO78_21050 leucine/isoleucine/valine transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D APECO78_04430 DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein D APECO78_22150 cytoplasmic membrane lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein D APECO78_04435 DL-methionine transporter permease K02072 metI; D-methionine transport system permease protein D APECO78_04440 DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D APECO78_10075 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10530 Putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein D APECO78_10080 oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APECO78_10085 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D APECO78_10090 oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D APECO78_10095 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO78_21535 dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein D APECO78_21525 dipeptide transporter permease DppB K12369 dppB; dipeptide transport system permease protein D APECO78_21520 dipeptide transporter K12370 dppC; dipeptide transport system permease protein D APECO78_21515 dipeptide transporter ATP-binding subunit K12371 dppD; dipeptide transport system ATP-binding protein D APECO78_21510 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein D APECO78_10345 antimicrobial peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D APECO78_10340 antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D APECO78_10335 antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D APECO78_10330 antimicrobial peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D APECO78_10325 antimicrobial peptide ABC system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D APECO78_21170 nickel ABC transporter periplasmic-binding protein K15584 nikA; nickel transport system substrate-binding protein D APECO78_21175 nickel transporter permease NikB K15585 nikB; nickel transport system permease protein D APECO78_21180 nickel transporter permease NikC K15586 nikC; nickel transport system permease protein D APECO78_21185 nickel transporter subunit K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO78_21190 nikE; nickel transporter ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO78_07820 glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein D APECO78_07825 glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D APECO78_07830 glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein D APECO78_07815 glutathione transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D APECO78_11160 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO78_18880 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO78_11155 binding-protein-dependent transport system inner membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D APECO78_11150 ATP-dependent peptide transporter membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APECO78_11145 D-ala-D-ala transporter subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D APECO78_11140 D-ala-D-ala transporter subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D APECO78_14610 microcin C ABC transporter periplasmic binding protein YejA K13893 yejA; microcin C transport system substrate-binding protein D APECO78_14615 putative transport system permease K13894 yejB; microcin C transport system permease protein D APECO78_14620 microcin C ABC transporter permease K13895 yejE; microcin C transport system permease protein D APECO78_14625 microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D APECO78_02410 iron-dicitrate transporter subunit K23181 fecB; ferric citrate transport system substrate-binding protein D APECO78_02400 iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein D APECO78_02405 fecC K23183 fecC; ferric citrate transport system permease protein D APECO78_02395 iron-dicitrate transporter ATP-binding subunit K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D APECO78_04200 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D APECO78_04205 iron-hydroxamate transporter permease subunit K23228 fhuB; ferric hydroxamate transport system permease protein D APECO78_04195 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D APECO78_06540 iron-enterobactin transporter periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D APECO78_06530 iron-enterobactin transporter membrane protein K23186 fepD; iron-siderophore transport system permease protein D APECO78_06525 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D APECO78_06520 Ferric enterobactin transport ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D APECO78_04230 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D APECO78_12380 vtamin B12-transporter permease K06073 btuC; vitamin B12 transport system permease protein D APECO78_12370 vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D APECO78_13100 znuA; high-affinity zinc transporter periplasmic component K09815 znuA; zinc transport system substrate-binding protein D APECO78_13110 high-affinity zinc transporter membrane protein K09816 znuB; zinc transport system permease protein D APECO78_13105 znuC; high-affinity zinc transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D APECO78_18360 transporter K16923 qrtT; energy-coupling factor transport system substrate-specific component D APECO78_18365 lipoprotein K16785 ecfT; energy-coupling factor transport system permease protein D APECO78_18370 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO78_18375 putative ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO78_02275 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D APECO78_18690 Permease YjgP/YjgQ family protein precursor K07091 lptF; lipopolysaccharide export system permease protein D APECO78_02280 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D APECO78_18685 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D APECO78_19845 lipopolysaccharide ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D APECO78_07630 hypothetical protein K25180 ybhR; drug efflux transport system permease protein D APECO78_07635 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein D APECO78_07640 ATP-binding component of a transporter K25182 ybhF; drug efflux transport system ATP-binding protein D APECO78_07645 efflux pump membrane fusion protein K25183 ybhG; membrane fusion protein YbhG D APECO78_09540 outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein D APECO78_09550 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D APECO78_09545 lipoprotein transporter ATP-binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D APECO78_14820 cytochrome c biogenesis protein CcmD K02196 ccmD; heme exporter protein D D APECO78_14825 heme exporter protein C K02195 ccmC; heme exporter protein C D APECO78_14830 Heme exporter protein B K02194 ccmB; heme exporter protein B D APECO78_14835 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D APECO78_21100 cell division protein K09811 ftsX; cell division transport system permease protein D APECO78_21105 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APECO78_04080 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein D APECO78_21205 putative transport protein K01992 ABC-2.P; ABC-2 type transport system permease protein D APECO78_04075 transporter subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D APECO78_06000 putative inner membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D APECO78_05995 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D APECO78_12230 sufC; cysteine desulfurase ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein D APECO78_15780 inner membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D APECO78_12140 multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump D APECO78_01040 DNA-damage-inducible transport protein K26937 dinF; MATE family, multidrug efflux pump D APECO78_13730 MATE family multidrug exporter K26937 dinF; MATE family, multidrug efflux pump D APECO78_18450 D-galactose transporter GalP K08137 galP; MFS transporter, SP family, galactose:H+ symporter D APECO78_17815 sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D APECO78_00965 D-xylose transporter XylE K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D APECO78_05235 LacY lactose MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D APECO78_15555 lacY; galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D APECO78_17625 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D APECO78_03805 broad specificity sugar efflux system SetA K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D APECO78_14570 sugar efflux transporter B K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D APECO78_22140 sugar efflux transporter C K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D APECO78_18560 nucleoside permease K03289 nupG; MFS transporter, NHS family, nucleoside permease D APECO78_15760 xanthosine transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease D APECO78_16680 alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D APECO78_01475 proline/glycine betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D APECO78_13715 shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D APECO78_11500 major facilitator superfamily protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D APECO78_21545 oxalate/formate antiporter protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D APECO78_19935 sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter D APECO78_17560 D-glucarate transporter GudP K03535 gudP; MFS transporter, ACS family, glucarate transporter D APECO78_19270 hexuronate transporter ExuT K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D APECO78_22315 D-galactonate transporter DgoT K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D APECO78_02890 putative 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease D APECO78_19470 putative transport protein K12299 garP; MFS transporter, ACS family, probable galactarate transporter D APECO78_02935 putative transporter K23016 lgoT; MFS transporter, ACS family, L-galactonate transporter D APECO78_05285 3-hydroxyphenylpropionic transporter MhpT K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter D APECO78_12270 putative transporter; MFS superfamily protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D APECO78_12275 transporter, major facilitator family protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D APECO78_12750 putative amino acid/amine transport protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D APECO78_05225 cynX; cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D APECO78_16410 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D APECO78_22180 sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D APECO78_15035 sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D APECO78_22185 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D APECO78_10000 nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO78_11065 nitrate/nitrite transport protein NarU K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO78_17785 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D APECO78_06535 enterobactin exporter EntS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D APECO78_05675 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D APECO78_14635 bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D APECO78_22225 Multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D APECO78_05485 MFS transport protein AraJ K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D APECO78_11390 arabinose transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D APECO78_07880 multidrug efflux system protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D APECO78_09230 multidrug resistance protein mdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D APECO78_09290 putative transport protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D APECO78_22420 multidrug efflux system protein MdtL K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein D APECO78_22160 nepI; ribonucleoside transporter K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump D APECO78_02835 multidrug efflux system protein MdtM K23241 mdtM; MFS transporter, DHA1 family, multidrug resistance protein D APECO78_12125 transporter K28371 punC; MFS transporter, DHA1 family, purine nucleoside transporter D APECO78_12105 transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D APECO78_17015 membrane translocase K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D APECO78_12945 transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D APECO78_14115 transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D APECO78_15590 putative multidrug efflux system K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein D APECO78_05915 fosmidomycin efflux system protein Fsr K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D APECO78_11780 putative transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D APECO78_00110 transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D APECO78_08260 MFS family transporter protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D APECO78_20615 transporter K06141 tsgA; MFS transporter, TsgA protein D APECO78_03685 putative transport protein K08368 yaaU; MFS transporter, putative metabolite transport protein D APECO78_17465 transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D APECO78_15815 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D APECO78_17750 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D APECO78_15810 phosphocarrier protein ptsH K02784 ptsH; phosphocarrier protein HPr D APECO78_19870 PTS system phosphohistidinoprotein-hexose phosphotransferase Npr K08485 ptsO; phosphocarrier protein NPr D APECO78_00530 mulitfunctional phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system fructose-like transporter subunit IIA K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-] D APECO78_14565 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D APECO78_15820 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO78_09465 PTS system glucose-specific transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO78_06935 PTS system N-acetyl glucosamine specific transporter subunits IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APECO78_11915 bifunctional PTS system maltose and glucose-specific transporter subunits IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO78_22480 PTS system beta-glucoside-specific transporter subunits IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APECO78_17140 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D APECO78_02170 PTS system trehalose(maltose)-specific transporter subunits IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APECO78_15875 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D APECO78_22275 PTS system alpha-glucoside-specific transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D APECO78_14555 PTS system fructose-specific transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO78_00255 fructose-like phosphotransferase system subunit EIIA K11201 frvA; fructose-like PTS system EIIA component [EC:2.7.1.-] D APECO78_00540 PTS system fructose-like transporter subunit IIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APECO78_00555 PTS system fructose-like transporter subunit EIIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APECO78_15700 putative PTS system IIB component ypdH K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APECO78_00250 PTS system subunit IIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D APECO78_00535 PTS system, fructose-like-2 IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D APECO78_15695 fructose-like permease IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D APECO78_18405 cmtB; PTS system mannitol-specific transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D APECO78_18400 mannitol-specific PTS system enzyme II component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO78_21825 PTS system mannitol-specific transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO78_07180 PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D APECO78_11425 PTS system cellobiose-specific transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO78_12510 N,N-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO78_11435 PTS system cellobiose-specific transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO78_12520 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO78_11430 PTS system cellobiose-specific transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APECO78_12515 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APECO78_17085 PTS system glucitol/sorbitol-specific transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D APECO78_17080 srlE; PTS system glucitol/sorbitol-specific transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D APECO78_17075 glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D APECO78_02620 PTS system IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO78_14180 PTS system galactitol-specific transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO78_02635 PTS system IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO78_14175 PTS system galactitol-specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO78_02630 PTS system IIC component K02775 gatC; galactitol PTS system EIIC component D APECO78_14170 PTS system galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component D APECO78_12885 PTS system mannose-specific transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO78_12890 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APECO78_12895 PTS system mannose-specific transporter subunit IID K02796 manZ; mannose PTS system EIID component D APECO78_00880 sorbose-permease PTS system IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D APECO78_00875 sorbose-specific PTS system EIIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D APECO78_00870 PTS system mannose-specific transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component D APECO78_00865 sorbose permease IID component K02815 sorM; sorbose PTS system EIID component D APECO78_19515 PTS system transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO78_19500 N-acetylgalactosamine-specific PTS system K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19505 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO78_19510 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO78_19535 PTS system N-acetylgalactosamine-specific transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO78_19540 PTS system N-acetylgalactosamine-specific transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D APECO78_19545 N-acetylgalactosamine-specific PTS system K10986 agaD; galactosamine PTS system EIID component D APECO78_01905 PTS system L-ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APECO78_01900 PTS system L-ascorbate-specific transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APECO78_01895 PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D APECO78_19860 PTS system sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D APECO78_09855 dihydroxyacetone kinase subunit M K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D APECO78_08150 aquaporin Z K06188 aqpZ; aquaporin Z D APECO78_00390 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D APECO78_10115 voltage-gated potassium channel K10716 kch; voltage-gated potassium channel D APECO78_05780 ammonium transporter K03320 amt; ammonium transporter, Amt family D APECO78_07860 GST-like protein yliJ K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO78_11995 glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO78_15325 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO78_19960 stringent starvation protein A K03599 sspA; stringent starvation protein A D APECO78_15180 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D APECO78_08840 HflBKC-binding inner membrane protein K19416 yccA; modulator of FtsH protease D APECO78_08500 formate transporter K06212 focA; formate transporter D APECO78_16185 focB; formate transporter K03459 focB; formate transporter D APECO78_20630 nitrite transporter NirC K02598 nirC; nitrite transporter D APECO78_20240 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D APECO78_05845 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel D APECO78_01740 mechanosensitive channel protein K22051 mscM; miniconductance mechanosensitive channel D APECO78_18330 mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel D APECO78_07710 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D APECO78_10535 hypothetical protein K16052 ynaI; MscS family membrane protein D APECO78_06460 mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel D APECO78_13265 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO78_04585 hypothetical protein K02557 motB; chemotaxis protein MotB D APECO78_13260 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D APECO78_18815 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D APECO78_18810 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D APECO78_07215 colicin uptake protein TolQ K03562 tolQ; biopolymer transport protein TolQ D APECO78_07220 colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR D APECO78_22910 magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter D APECO78_10590 Zn(II) transporter K16074 zntB; zinc transporter D APECO78_06700 chromosome condensation membrane protein K06199 crcB; fluoride exporter D APECO78_11345 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D APECO78_02065 inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO78_16780 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO78_08635 outer membrane protein F K09476 ompF; outer membrane pore protein F D APECO78_13605 hypothetical protein K09476 ompF; outer membrane pore protein F D APECO78_04635 outer membrane phosphoporin protein E K11929 phoE; outer membrane pore protein E D APECO78_14910 outer membrane porin protein C K09475 ompC; outer membrane pore protein C D APECO78_07460 outer membrane porin, DLP12 prophage K16076 nmpC; outer membrane porin protein LC D APECO78_10615 outer membrane pore protein N, non-specific K14062 ompN; outer membrane protein N D APECO78_00995 lamB; maltoporin K02024 lamB; maltoporin D APECO78_11420 putative outer membrane protein K10124 bglH; carbohydrate-specific outer membrane porin D APECO78_22470 carbohydrate-specific outer membrane porin, cryptic K10124 bglH; carbohydrate-specific outer membrane porin D APECO78_08775 outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family D APECO78_07740 outer membrane protein X K11934 ompX; outer membrane protein X D APECO78_15535 long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein D APECO78_05565 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D APECO78_02725 outer membrane usher protein, type 1 fimbrial synthesis K07347 fimD; outer membrane usher protein D APECO78_04135 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_08690 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_11265 putative fimbrial usher protein K07347 fimD; outer membrane usher protein D APECO78_14260 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_19565 Fimbrial usher family protein K07347 fimD; outer membrane usher protein D APECO78_22520 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_09700 putative outer membrane autotransporter barrel pectin lyase fold protein K12678 aidA-I; autotransporter family porin D APECO78_11295 lipoprotein/autotransporter domain-containing protein K12678 aidA-I; autotransporter family porin D APECO78_14995 adhesin K07279 yfaL; autotransporter family porin D APECO78_06495 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor D APECO78_07695 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor D APECO78_02415 ferric citrate outer membrane transporter K16091 fecA; Fe(3+) dicitrate transport protein D APECO78_00630 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter D APECO78_09470 ferric-rhodotorulic acid outer membrane transporter K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D APECO78_14490 catecholate siderophore receptor CirA K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D APECO78_04190 ferrichrome outer membrane transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO78_10970 putative iron outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO78_06435 copper/silver efflux system outer membrane protein CusC K07796 cusC; outer membrane protein, copper/silver efflux system D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_14405 multidrug resistance outer membrane protein MdtQ K18139 oprM; outer membrane protein, multidrug efflux system D APECO78_01320 outer membrane efflux protein MdtP K15550 mdtP; outer membrane protein, multidrug efflux system D APECO78_08905 putative polysaccharide export protein gfcE precursor K01991 wza; polysaccharide biosynthesis/export protein D APECO78_14040 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APECO78_10470 outer membrane porin K14053 ompG; outer membrane protein G D APECO78_11880 outer membrane porin protein K16140 uidC; putative glucuronide porin D APECO78_04315 outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family D APECO78_16290 outer membrane biogenesis protein BamB K17713 bamB; outer membrane protein assembly factor BamB D APECO78_16100 Lipoprotein-34 K07287 bamC; outer membrane protein assembly factor BamC D APECO78_16705 outer membrane biogenesis protein BamD K05807 bamD; outer membrane protein assembly factor BamD D APECO78_16800 outer membrane biogenesis protein BamE K06186 bamE; outer membrane protein assembly factor BamE D APECO78_02080 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D APECO78_02085 hypothetical protein K09800 tamB; translocation and assembly module TamB D APECO78_00115 ompL; outer membrane porin L K22110 kdgM; oligogalacturonate-specific porin family protein D APECO78_02690 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein D APECO78_18960 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein D APECO78_21855 adhesin K21449 ata; trimeric autotransporter adhesin D APECO78_19840 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D APECO78_19835 lipopolysaccharide exporter periplasmic protein K11719 lptC; lipopolysaccharide export system protein LptC D APECO78_03730 LPS assembly outer membrane complex protein LptD K04744 lptD; LPS-assembly protein D APECO78_06785 LPS-assembly lipoprotein RlpB K03643 lptE; LPS-assembly lipoprotein D APECO78_21440 Cellulose synthase operon C domain protein precursor K20543 bcsC; cellulose synthase operon protein C D APECO78_12705 MltA-interacting protein K07274 mipA; MipA family protein D APECO78_21740 outer membrane protein K07274 mipA; MipA family protein D APECO78_06880 magnesium/cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein D APECO78_14420 hypothetical protein K06518 cidA; holin-like protein D APECO78_15975 carboxysome structural protein EutM K04027 eutM; ethanolamine utilization protein EutM D APECO78_01530 melibiose:sodium symporter K11104 melB; melibiose permease D APECO78_11890 glucuronide transporter K16139 uidB; glucuronide carrier protein D APECO78_06455 phenylalanine transporter K11732 pheP; phenylalanine-specific permease D APECO78_14500 lysine transporter K11733 lysP; lysine-specific permease D APECO78_04000 aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP D APECO78_16905 gamma-aminobutyrate transporter K11735 gabP; GABA permease D APECO78_05515 putative proline-specific permease K11736 proY; proline-specific permease ProY D APECO78_02005 D-alanine/D-serine/glycine permease K11737 cycA; D-serine/D-alanine/glycine transporter D APECO78_10980 L-asparagine permease K11738 ansP; L-asparagine permease D APECO78_10355 putrescine importer PuuP K14052 puuP; putrescine importer D APECO78_06990 putrescine transporter K03756 potE; putrescine:ornithine antiporter D APECO78_01595 lysine/cadaverine antiporter K03757 cadB; cadaverine:lysine antiporter D APECO78_11830 putative arginine/ornithine transport protein K03758 arcD; arginine:ornithine antiporter / lysine permease D APECO78_01500 arginine:agmatin antiporter K03759 adiC; arginine:agmatine antiporter D APECO78_11185 glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D APECO78_20645 fructoselysine transporter K19540 frlA; fructoselysine transporter D APECO78_01645 transporter K16263 yjeH; amino acid efflux transporter D APECO78_07255 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D APECO78_00330 fieF; ferrous iron efflux protein F K13283 fieF; ferrous-iron efflux pump FieF D APECO78_19015 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D APECO78_06450 copper/silver efflux system, membrane component K07787 cusA; copper/silver efflux system protein D APECO78_21360 multidrug transporter MdtF, RpoS-dependent K18899 mdtF; multidrug efflux pump D APECO78_05830 multidrug efflux system protein AcrB K18138 acrB; multidrug efflux pump D APECO78_16045 aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump D APECO78_20150 multidrug efflux system protein AcrF K18142 acrF; multidrug efflux pump D APECO78_14105 multidrug efflux system subunit MdtB K07788 mdtB; multidrug efflux pump D APECO78_14110 multidrug efflux system, subunit C K07789 mdtC; multidrug efflux pump D APECO78_01695 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D APECO78_11800 multidrug efflux system protein MdtI K11742 mdtI; spermidine export protein MdtI D APECO78_11805 multidrug efflux system protein MdtJ K11743 mdtJ; spermidine export protein MdtJ D APECO78_11445 O-acetylserine/cysteine export protein K15268 eamA; O-acetylserine/cysteine efflux transporter D APECO78_07735 threonine and homoserine efflux system K11939 rhtA; inner membrane transporter RhtA D APECO78_00295 rhamnose-proton symporter K02856 rhaT; L-rhamnose-H+ transport protein D APECO78_22925 putative chloramphenicol resistance permease K05786 rarD; chloramphenicol-sensitive protein RarD D APECO78_10950 inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APECO78_15110 polymyxin resistance protein PmrL K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D APECO78_11710 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D APECO78_02295 Gnt-II system L-idonate transporter IdnT K06157 idnT; Gnt-II system L-idonate transporter D APECO78_02745 fructuronate transporter K16321 gntP; high-affinity gluconate transporter D APECO78_20865 high-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D APECO78_20970 low affinity gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D APECO78_02590 putative transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D APECO78_17290 putative transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D APECO78_00305 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D APECO78_01630 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D APECO78_01545 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D APECO78_21860 L-lactate permease K00427 lldP; L-lactate permease D APECO78_05095 choline transport protein BetT K02168 betT; choline/glycine/proline betaine transport protein D APECO78_03660 L-carnitine/gamma-butyrobetaine antiporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter D APECO78_10855 potassium-tellurite ethidium and proflavin transporter K03304 tehA; tellurite resistance protein D APECO78_09965 calcium/sodium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D APECO78_19820 calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter D APECO78_18725 phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D APECO78_21245 Low-affinity inorganic phosphate transporter 1 K16322 pit; low-affinity inorganic phosphate transporter D APECO78_20110 sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter D APECO78_09065 proline:sodium symporter PutP K11928 putP; sodium/proline symporter D APECO78_01250 actP; acetate permease K14393 actP; cation/acetate symporter D APECO78_01300 glutamate/aspartate:proton symporter K11102 gltP; proton glutamate symport protein D APECO78_21430 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D APECO78_19250 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D APECO78_22110 sodium/glutamate symport carrier protein GltS K03312 gltS; glutamate:Na+ symporter, ESS family D APECO78_03540 pH-dependent sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D APECO78_09795 sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family D APECO78_01240 cation/proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D APECO78_09820 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D APECO78_03695 glutathione-regulated potassium-efflux system protein K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D APECO78_03690 glutathione-regulated potassium-efflux system ancillary protein KefF K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D APECO78_20545 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D APECO78_20550 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D APECO78_05910 cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter D APECO78_23065 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D APECO78_20235 potassium transporter peripheral membrane protein K03499 trkA; trk/ktr system potassium uptake protein D APECO78_05200 codB; cytosine permease K10974 codB; cytosine permease D APECO78_16210 uracil transporter K02824 uraA; uracil permease D APECO78_09020 putative transport protein K09016 rutG; putative pyrimidine permease RutG D APECO78_18150 purine permease ygfU K24206 uacT; uric acid transporter D APECO78_22115 putative purine permease yicE K16345 xanP; xanthine permease XanP D APECO78_18125 purine permease YgfO K16346 xanQ; xanthine permease XanQ D APECO78_01235 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO78_18135 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO78_22170 putative adenine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO78_22440 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO78_15725 nucleoside (except guanosine) transporter NupC K11535 nupC; nucleoside transport protein D APECO78_14540 putative sodium/proton nucleoside transporter K16324 psuT; putative pseudouridine transporter D APECO78_14525 putative transport system permease K16325 nupX; nucleoside permease D APECO78_13330 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein D APECO78_19650 tryptophan permease K03835 mtr; tryptophan-specific transport protein D APECO78_22415 tryptophan permease TnaB K03836 tnaB; low affinity tryptophan permease D APECO78_17600 serine transporter K03837 sdaC; serine transporter D APECO78_19415 threonine/serine transporter TdcC K03838 tdcC; threonine transporter D APECO78_21505 putative transporter K26603 yhjV; inner membrane transport protein D APECO78_19390 transporter K26604 cyuP; cysteine uptake transport protein D APECO78_10880 putative benzoate transporter K05782 benE; benzoate membrane transport protein D APECO78_06640 citrate/succinate antiporter CitT K09477 citT; citrate:succinate antiporter D APECO78_19125 L-tartrate/succinate antiporter K11106 ttdT; L-tartrate/succinate antiporter D APECO78_04215 chloride channel protein K03281 clcA; chloride channel protein, CIC family D APECO78_11760 Putative chloride channel K03281 clcA; chloride channel protein, CIC family D APECO78_15710 ion channel protein K03281 clcA; chloride channel protein, CIC family D APECO78_09905 transporter K03321 TC.SULP; sulfate permease, SulP family D APECO78_15720 manganese transport protein MntH K03322 mntH; manganese transport protein D APECO78_01950 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D APECO78_21710 TRAP family 2,3-diketo-L-gulonate transporter periplasmic 2,3-diketo-L-gulonate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D APECO78_01960 TRAP dicarboxylate transporter subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein D APECO78_21700 2,3-diketo-L-gulonate TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D APECO78_01955 transporter K11690 dctM; TRAP-type transport system large permease protein D APECO78_21705 L-dehydroascorbate transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D APECO78_00845 transporter K03324 yjbB; phosphate:Na+ symporter D APECO78_21295 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D APECO78_06685 C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D APECO78_19950 cryptic C4-dicarboxylate transporter DcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D APECO78_22805 O-antigen translocase K16693 wzxE; enterobacterial common antigen flippase D APECO78_13960 colanic acid exporter K16695 wzxC; lipopolysaccharide exporter D APECO78_09310 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D APECO78_15615 transporter YfdV K13936 mdcF; malonate transporter and related proteins D APECO78_22625 potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D APECO78_18325 arginine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D APECO78_22950 homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D APECO78_22945 threonine efflux system K05835 rhtC; threonine efflux protein D APECO78_05165 neutral amino-acid efflux system K03329 yahN; amino acid exporter D APECO78_16635 cysteine/O-acetylserine exporter K11249 eamB; cysteine/O-acetylserine efflux protein D APECO78_12790 leucine export protein LeuE K11250 leuE; leucine efflux protein D APECO78_16995 branched chain amino acid exporter (LIV-E) family protein K26605 azlC; branched chain amino acid efflux pump D APECO78_17000 L-valine exporter K26606 azlD; branched chain amino acid efflux pump D APECO78_20015 p-hydroxybenzoic acid efflux subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D APECO78_01325 multidrug efflux system protein MdtO K15547 mdtO; multidrug resistance protein MdtO D APECO78_16190 permease perM K03548 perM; putative permease D APECO78_21145 hypothetical protein K09125 yhhQ; queuosine precursor transporter D APECO78_11395 inner membrane protein K05595 marC; multiple antibiotic resistance protein D APECO78_03505 hypothetical protein K07034 GPR1; acetate uptake transporter family protein D APECO78_03895 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D APECO78_16940 hypothetical protein K28156 alaE; L-alanine exporter D APECO78_12905 hypothetical protein K23242 mntP; manganese efflux pump family protein D APECO78_09070 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter D APECO78_09075 inactive ferrous ion transporter periplasmic protein EfeO K07224 efeO; iron uptake system component EfeO D APECO78_09080 hypothetical protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D APECO78_14245 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D APECO78_06570 carbon starvation protein A K06200 cstA; carbon starvation protein D APECO78_02870 putative carbon starvation protein K23676 btsT; pyruvate/proton symporter D APECO78_08145 transporter K28370 lysO; lysine exporter D APECO78_10125 transport protein TonB K03832 tonB; periplasmic protein TonB D APECO78_07235 peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D APECO78_07225 cell envelope integrity inner membrane protein TolA K03646 tolA; colicin import membrane protein D APECO78_07230 translocation protein TolB K03641 tolB; TolB protein D APECO78_10005 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11060 nitrate reductase 2 (NRZ), alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10010 narH; nitrate reductase A subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11055 narY; nitrate reductase Z subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO78_10020 Respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11045 cryptic nitrate reductase 2 subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO78_11090 formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APECO78_11095 formate dehydrogenase, nitrate-inducible, major subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APECO78_11100 formate dehydrogenase-N subunit beta K08349 fdnH; formate dehydrogenase-N, beta subunit D APECO78_11105 Formate dehydrogenase-N gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit D APECO78_11750 oxidoreductase, membrane subunit K07312 ynfH; Tat-targeted selenate reductase subunit YnfH D APECO78_11745 putative oxidoreductase Fe-S subunit K07311 ynfG; Tat-targeted selenate reductase subunit YnfG D APECO78_11735 putative dimethyl sulfoxide reductase major subunit K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9] D APECO78_11740 oxidoreductase subunit K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9] D APECO78_08240 anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D APECO78_08245 anaerobic dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APECO78_08250 dimethyl sulfoxide reductase, anaerobic subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D APECO78_08975 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO78_08970 trimethylamine N-oxide reductase cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D APECO78_08980 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO78_13180 NapC/NirT cytochrome c domain protein K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D APECO78_13175 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO78_21565 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D APECO78_12165 thiosulfate reductase cytochrome B subunit K08354 phsC; thiosulfate reductase cytochrome b subunit D APECO78_17010 multidrug efflux system protein EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D APECO78_01330 multidrug resistance protein MdtN K15549 mdtN; membrane fusion protein, multidrug efflux system D APECO78_06445 copper/silver efflux system membrane fusionprotein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system D APECO78_21355 multidrug efflux system protein MdtE K18898 mdtE; membrane fusion protein, multidrug efflux system D APECO78_05835 acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D APECO78_20145 hypothetical protein K18141 acrE; membrane fusion protein, multidrug efflux system D APECO78_07305 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump D APECO78_14100 multidrug efflux system subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D APECO78_08165 macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D APECO78_20020 p-hydroxybenzoic acid efflux subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D APECO78_08895 cryptic autophosphorylating protein tyrosine kinase Etk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO78_14030 tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO78_19595 outer membrane lipoprotein K28369 dolP; outer membrane lipoprotein DolP D APECO78_07250 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D APECO78_20830 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D APECO78_20835 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D APECO78_20840 ferrous iron transport protein FeoC K07490 feoC; ferrous iron transport protein C D APECO78_05385 microcin B17 transporter K17938 sbmA; peptide/bleomycin uptake transporter D APECO78_08740 paraquat-inducible membrane protein A K03808 pqiA; intermembrane transport protein PqiA/LetA D APECO78_12970 hypothetical protein K03808 pqiA; intermembrane transport protein PqiA/LetA D APECO78_08745 paraquat-inducible protein B K06192 pqiB; intermembrane transport protein PqiB/LetB D APECO78_12975 hypothetical protein K06192 pqiB; intermembrane transport protein PqiB/LetB D APECO78_08750 lipoprotein K09857 pqiC; intermembrane transport lipoprotein PqiC D APECO78_21250 universal stress protein UspB K06144 uspB; universal stress protein B D APECO78_01685 entericidin A K16347 ecnA; entericidin A D APECO78_01690 entericidin B membrane lipoprotein K16348 ecnB; entericidin B D APECO78_14810 heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D APECO78_21320 putative Mg(2+) transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D APECO78_13630 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D APECO78_22240 inner membrane protein K00389 yidH; inner membrane protein YidH D APECO78_13010 copper resistance protein D K07245 pcoD; copper resistance protein D D APECO78_13015 hypothetical protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:ecoa02044] D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_20405 general secretory pathway component, cryptic K02450 gspA; general secretion pathway protein A D APECO78_20400 hypothetical protein K02451 gspB; general secretion pathway protein B D APECO78_20410 general secretory pathway component, cryptic K02452 gspC; general secretion pathway protein C D APECO78_18625 General secretion pathway protein D K02453 gspD; general secretion pathway protein D D APECO78_20415 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D APECO78_18620 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO78_20420 general secretory pathway component, cryptic K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO78_20425 general secretory pathway component, cryptic K02455 gspF; general secretion pathway protein F D APECO78_18605 type II secretion protein K02456 gspG; general secretion pathway protein G D APECO78_20430 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D APECO78_18600 type II secretion protein GspH K02457 gspH; general secretion pathway protein H D APECO78_20435 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D APECO78_18595 type II secretion protein K02458 gspI; general secretion pathway protein I D APECO78_20440 general secretion pathway protein i precursor K02458 gspI; general secretion pathway protein I D APECO78_18590 type II secretion protein GspJ K02459 gspJ; general secretion pathway protein J D APECO78_20445 putative general secretory pathway component, cryptic K02459 gspJ; general secretion pathway protein J D APECO78_18585 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D APECO78_20450 general secretion pathway protein K K02460 gspK; general secretion pathway protein K D APECO78_18580 GspL-like protein K02461 gspL; general secretion pathway protein L D APECO78_20455 General secretion pathway protein L K02461 gspL; general secretion pathway protein L D APECO78_18575 general secretion pathway protein YghD K02462 gspM; general secretion pathway protein M D APECO78_20460 general secretion pathway protein M K02462 gspM; general secretion pathway protein M D APECO78_20465 bifunctional transmembrane prepilin leader peptidase/methylase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APECO78_18485 transporter K02669 pilT; twitching motility protein PilT D APECO78_17735 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A D APECO78_17730 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B D APECO78_17720 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C D APECO78_03980 major pilin subunit K02682 ppdD; prepilin peptidase dependent protein D D APECO78_03975 hypothetical protein K02504 hofB; protein transport protein HofB D APECO78_03970 type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC D APECO78_20765 putative pilus assembly protein K12288 hofM; pilus assembly protein HofM D APECO78_20760 PilN family protein K12289 hofN; pilus assembly protein HofN D APECO78_20755 hypothetical protein K12290 hofO; pilus assembly protein HofO D APECO78_20750 hypothetical protein K12291 hofP; pilus assembly protein HofP D APECO78_20745 fimbrial transporter K02507 hofQ; protein transport protein HofQ D APECO78_18495 hypothetical protein K02221 yggT; YggT family protein D APECO78_05735 hypothetical protein K02237 comEA; competence protein ComEA D APECO78_08545 ComEC family competence protein K02238 comEC; competence protein ComEC D APECO78_17930 type III secretion protein EprI K03221 yscF; type III secretion protein F D APECO78_17980 type III secretion system protein SpaO K03225 yscQ; type III secretion protein Q D APECO78_17920 type III secretion system lipoprotein EprK K22505 prgK; type III secretion system inner membrane ring protein D APECO78_17975 spaP; type III secretion system protein SpaP K22507 spaP; type III secretion system export apparatus protein D APECO78_17970 type III secretion protein EpaQ K22508 spaQ; type III secretion system export apparatus protein D APECO78_17965 type III secretion protein EpaR K22509 spaR; type III secretion system export apparatus protein D APECO78_17960 type III secretion system protein SpaS K22510 spaS; type III secretion system export apparatus switch protein D APECO78_18000 type III secretion apparatus protein K22513 spaM; type III secretion system protein D APECO78_17985 protein EivJ K22514 spaN; type III secretion system protein D APECO78_17935 type III secretion EprH protein K22488 prgH; type III secretion system protein D APECO78_17925 type III secretion protein EprJ K22487 prgJ; type III secretion system protein D APECO78_04580 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO78_13210 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO78_13215 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D APECO78_13480 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D APECO78_13490 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D APECO78_13495 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APECO78_13520 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APECO78_13525 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D APECO78_13530 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D APECO78_13535 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APECO78_13540 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APECO78_18180 protein disulfide isomerase II DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APECO78_09700 putative outer membrane autotransporter barrel pectin lyase fold protein K12678 aidA-I; autotransporter family porin D APECO78_11295 lipoprotein/autotransporter domain-containing protein K12678 aidA-I; autotransporter family porin D APECO78_14995 adhesin K07279 yfaL; autotransporter family porin D APECO78_06420 Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO78_10995 ImpA family type VI secretion-associated protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO78_02710 type 1 fimbriae major subunit FimA K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_04145 fimbrial-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_08680 fimbrial-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_08700 fimbrial-like adhesin protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_11275 putative type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_19555 putative fimbrial-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_22530 lpfA; fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_02720 chaperone FimC, periplasmic K07346 fimC; fimbrial chaperone protein D APECO78_08685 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_11270 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_19560 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_22525 lfpB; fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_02725 outer membrane usher protein, type 1 fimbrial synthesis K07347 fimD; outer membrane usher protein D APECO78_04135 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_08690 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_11265 putative fimbrial usher protein K07347 fimD; outer membrane usher protein D APECO78_14260 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_19565 Fimbrial usher family protein K07347 fimD; outer membrane usher protein D APECO78_22520 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_02730 minor component of type 1 fimbriae K07348 fimF; minor fimbrial subunit D APECO78_02735 minor component of type 1 fimbriae K07349 fimG; minor fimbrial subunit D APECO78_11255 putative fimbrial-like adhesin exported protein K07349 fimG; minor fimbrial subunit D APECO78_02740 adhesin K07350 fimH; minor fimbrial subunit D APECO78_15505 fimbrial outer membrane usher protein StfC K12518 papC; outer membrane usher protein PapC D APECO78_15500 chaperone K12519 papD; chaperone protein PapD D APECO78_04995 common pilus ECP K21964 ecpA; Mat/Ecp fimbriae major subunit D APECO78_04990 chaperone K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone D APECO78_04985 hypothetical protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein D APECO78_04980 hypothetical protein K21967 ecpD; Mat/Ecp fimbriae adhesin D APECO78_04975 hypothetical protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone D APECO78_09180 major curlin subunit K04334 csgA; major curlin subunit D APECO78_09175 curlin minor subunit CsgB K04335 csgB; minor curlin subunit D APECO78_09185 csgC; curli assembly protein CsgC K04336 csgC; curli production protein D APECO78_09165 curli assembly protein CsgE K04337 csgE; curli production assembly/transport component CsgE D APECO78_09160 curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF D APECO78_09155 curli production assembly/transport protein CsgG K06214 csgG; curli production assembly/transport component CsgG D APECO78_03940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO78_21890 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APECO78_05545 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D APECO78_00665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APECO78_05550 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D APECO78_19710 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APECO78_03935 SecA regulator SecM K13301 secM; secretion monitor D APECO78_20290 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APECO78_16770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APECO78_21110 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO78_05540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APECO78_22395 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO78_23010 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D APECO78_23015 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D APECO78_23020 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APECO78_06710 tatE; twin arginine translocase protein E K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:ecoa02042] D APECO78_02065 inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO78_16780 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO78_18210 hemolysin K11068 hlyIII; hemolysin III D APECO78_09770 hlyE; hemolysin E K11139 hlyE; hemolysin E D APECO78_09775 hemolysin E K11139 hlyE; hemolysin E C 02022 Two-component system [BR:ecoa02022] D APECO78_05505 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APECO78_05500 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D APECO78_09605 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO78_09610 DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO78_20810 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO78_20815 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D APECO78_11850 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APECO78_11845 two-component response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D APECO78_00315 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO78_00320 DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APECO78_03445 two-component system sensor kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D APECO78_03440 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D APECO78_14120 signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APECO78_14125 DNA-binding transcriptional regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR D APECO78_01485 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO78_01490 two-component response regulator K07771 basR; two-component system, OmpR family, response regulator BasR D APECO78_06425 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO78_06430 DNA-binding transcriptional activator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO78_18910 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO78_18905 DNA-binding transcriptional regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D APECO78_07005 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APECO78_07000 DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APECO78_08955 hybrid sensory histidine kinase TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D APECO78_08965 DNA-binding transcriptional regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D APECO78_19890 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO78_03455 two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APECO78_13620 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D APECO78_13625 transcriptional regulatory protein YedW K02483 K02483; two-component system, OmpR family, response regulator D APECO78_09995 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APECO78_09990 fused DNA-binding response regulator NarL and sensory histidine kinase NarX in two-component regulatory system K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D APECO78_16040 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APECO78_14795 transcriptional regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D APECO78_22190 sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D APECO78_22195 DNA-binding transcriptional activator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA D APECO78_14925 hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO78_14915 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO78_14920 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APECO78_17545 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO78_13350 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APECO78_15605 hybrid sensory histidine kinase in two-component regulatory system with EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D APECO78_15600 DNA-binding transcriptional activator EvgA K07690 evgA; two-component system, NarL family, response regulator EvgA D APECO78_06180 transcriptional regulator FimZ K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D APECO78_06675 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D APECO78_06680 two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB D APECO78_01555 sensory histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APECO78_01550 DNA-binding transcriptional activator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D APECO78_14340 sensory kinase in two-component system with YehT K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D APECO78_14335 two-component response-regulatory protein YehT K27883 btsR; two-component system, LytTR family, low-concentration pyruvate response regulator D APECO78_15655 hypothetical protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3] D APECO78_15660 putative response regulator in two-component system with YpdA K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator D APECO78_00080 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APECO78_00075 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D APECO78_00780 sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D APECO78_00785 transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG D APECO78_14930 sensory histidine kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D APECO78_14935 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC D APECO78_16510 sensory histidine kinase GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO78_16500 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D APECO78_13255 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO78_13225 chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO78_13230 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO78_10045 response regulator of RpoS K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:ecoa02035] D APECO78_13255 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO78_13250 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D APECO78_13235 chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APECO78_13230 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO78_13225 chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO78_13220 chemotaxis regulator CheZ K03414 cheZ; chemotaxis protein CheZ D APECO78_02930 methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APECO78_13245 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APECO78_10815 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APECO78_13240 methyl-accepting protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D APECO78_19165 aerotaxis sensor receptor K03776 aer; aerotaxis receptor D APECO78_13490 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D APECO78_13495 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APECO78_13500 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D APECO78_13525 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D APECO78_13530 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D APECO78_13535 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APECO78_13540 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APECO78_04580 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO78_13210 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO78_13215 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D APECO78_13205 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D APECO78_13485 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APECO78_13515 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D APECO78_13520 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APECO78_13480 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D APECO78_09365 flagellar basal-body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D APECO78_09325 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D APECO78_09360 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D APECO78_13510 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D APECO78_13475 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D APECO78_13505 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D APECO78_09330 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D APECO78_09335 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D APECO78_09340 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D APECO78_09350 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D APECO78_09355 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D APECO78_09370 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D APECO78_09345 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D APECO78_09375 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D APECO78_09380 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D APECO78_09315 flagella synthesis chaperone protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D APECO78_13405 flagellin K02406 fliC; flagellin D APECO78_13410 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D APECO78_13415 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D APECO78_13420 flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT D APECO78_13275 transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO78_13270 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO78_13395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APECO78_13265 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO78_04585 hypothetical protein K02557 motB; chemotaxis protein MotB D APECO78_13260 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D APECO78_13385 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APECO78_13390 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APECO78_09320 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APECO78_18485 transporter K02669 pilT; twitching motility protein PilT D APECO78_02710 type 1 fimbriae major subunit FimA K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_04145 fimbrial-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_08680 fimbrial-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_08700 fimbrial-like adhesin protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_11275 putative type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_19555 putative fimbrial-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_22530 lpfA; fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO78_02720 chaperone FimC, periplasmic K07346 fimC; fimbrial chaperone protein D APECO78_08685 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_11270 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_19560 periplasmic pilin chaperone K07346 fimC; fimbrial chaperone protein D APECO78_22525 lfpB; fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein D APECO78_02725 outer membrane usher protein, type 1 fimbrial synthesis K07347 fimD; outer membrane usher protein D APECO78_04135 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_08690 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_11265 putative fimbrial usher protein K07347 fimD; outer membrane usher protein D APECO78_14260 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_19565 Fimbrial usher family protein K07347 fimD; outer membrane usher protein D APECO78_22520 outer membrane usher protein K07347 fimD; outer membrane usher protein D APECO78_02730 minor component of type 1 fimbriae K07348 fimF; minor fimbrial subunit D APECO78_02735 minor component of type 1 fimbriae K07349 fimG; minor fimbrial subunit D APECO78_11255 putative fimbrial-like adhesin exported protein K07349 fimG; minor fimbrial subunit D APECO78_02740 adhesin K07350 fimH; minor fimbrial subunit D APECO78_02715 fimbrial protein involved in type 1 pilus biosynthesis K07351 fimI; fimbrial protein D APECO78_06150 fimbrial-like protein K07352 sfmA; type 1 fimbrial protein D APECO78_06155 fimbrial chaperone protein FimC K07353 sfmC; fimbrial chaperone protein D APECO78_06160 outer membrane export usher protein SfmD K07354 sfmD; outer membrane usher protein D APECO78_06175 fimbrial-like adhesin protein K07355 sfmF; fimbrial-like protein D APECO78_06170 fimH; fimbrial-like adhesin K07356 sfmH; fimbrial protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ecoa04812] D APECO78_20070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APECO78_03925 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APECO78_03920 cell division protein FtsA K03590 ftsA; cell division protein FtsA D APECO78_09730 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D APECO78_09725 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D APECO78_09720 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D APECO78_16830 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ecoa04147] D APECO78_05885 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D APECO78_17510 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO78_10795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_12690 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO78_18345 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APECO78_12195 Pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_13085 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO78_20610 peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APECO78_19065 hypothetical protein K07192 FLOT; flotillin D APECO78_01655 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO78_03520 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO78_00925 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO78_16270 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D APECO78_00660 elongation factor Tu K02358 tuf; elongation factor Tu D APECO78_20485 Elongation factor Tu K02358 tuf; elongation factor Tu D APECO78_09475 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D APECO78_15780 inner membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D APECO78_12825 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D APECO78_14955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_17830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO78_05890 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D APECO78_05865 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D APECO78_00590 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APECO78_19700 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APECO78_18080 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO78_02130 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO78_07280 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APECO78_20955 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D APECO78_00385 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APECO78_00090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO78_05350 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D APECO78_05420 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO78_18275 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO78_00795 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APECO78_04020 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO78_03670 putative electron transfer flavoprotein FixB K03522 fixB; electron transfer flavoprotein alpha subunit D APECO78_13075 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APECO78_00350 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO78_07270 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO78_01700 outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ecoa02048] D APECO78_17375 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D APECO78_17370 ssRNA endonuclease K09951 cas2; CRISPR-associated protein Cas2 D APECO78_17405 helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D APECO78_17400 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA D APECO78_17395 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D APECO78_17390 hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC D APECO78_17385 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD D APECO78_17380 hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE D APECO78_16850 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D APECO78_16845 type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D APECO78_16840 adenine-specific DNA-methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D APECO78_07950 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_20725 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO78_04775 putative methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D APECO78_06265 DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D APECO78_20130 methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D APECO78_02525 methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_13590 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO78_03155 phage protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D APECO78_04790 phage protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D APECO78_02540 putative endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D APECO78_02535 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D APECO78_21595 small toxic polypeptide K18920 hokA; protein HokA D APECO78_10810 small toxic polypeptide K18921 hokB; protein HokB D APECO78_03530 regulatory protein for HokC K18919 hokC_D; protein HokC/D D APECO78_11615 putative prophage maintenance protein K18919 hokC_D; protein HokC/D D APECO78_06485 hypothetical protein K18922 hokE; protein HokE D APECO78_17415 small toxic membrane polypeptide K18922 hokE; protein HokE D APECO78_09955 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO78_09960 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO78_21485 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO78_21490 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO78_21495 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO78_21500 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO78_22220 toxic peptide TisB K19148 tisB; small toxic protein TisB D APECO78_16545 toxic membrane protein K19154 shoB; small toxic protein ShoB D APECO78_17525 toxin ChpA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D APECO78_17530 antitoxin MazE K07172 mazE; antitoxin MazE D APECO78_02100 toxin ChpB K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D APECO78_02095 antitoxin ChpS K18842 chpS; antitoxin ChpS D APECO78_19485 hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D APECO78_19480 regulator PrlF K19156 prlF; antitoxin PrlF D APECO78_13820 Toxin yoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D APECO78_13825 antitoxin YefM K19159 yefM; antitoxin YefM D APECO78_11285 regulator with hipB K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO78_11290 antitoxin HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO78_10900 DNA-binding transcriptional regulator K18843 hicB; antitoxin HicB D APECO78_10405 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C D APECO78_10400 phage shock protein B K03970 pspB; phage shock protein B D APECO78_14140 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D APECO78_14135 transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 D APECO78_17155 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D APECO78_19220 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D APECO78_17150 HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APECO78_19215 DNA-binding transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APECO78_05935 DNA-binding transcriptional regulator K21498 higA-1; antitoxin HigA-1 D APECO78_11110 DNA-binding transcriptional regulator K21498 higA-1; antitoxin HigA-1 D APECO78_18890 hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin D APECO78_18885 HTH-type transcriptional regulator ygiT K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D APECO78_16080 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D APECO78_16085 putative toxin of the MvpT-MvpA toxin-antitoxin system K18829 mvpT; antitoxin VapB D APECO78_00915 putative zeta toxin; poison-antidote element K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176] D APECO78_02225 hypothetical protein K19334 tabA; biofilm protein TabA D APECO78_07700 hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A D APECO78_09265 biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS D APECO78_07850 biofilm regulator BssR K19688 bssR; biofilm regulator BssR D APECO78_09520 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D APECO78_03925 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APECO78_20070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APECO78_18875 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APECO78_18970 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APECO78_15745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO78_18195 hypothetical protein K19168 cptA; toxin CptA D APECO78_18200 hypothetical protein K09159 cptB; antitoxin CptB D APECO78_01575 hypothetical protein K18839 ghoT; toxin GhoT D APECO78_01570 hypothetical protein K18840 ghoS; antitoxin GhoS D APECO78_10940 hypothetical protein K28274 ortT; orphan toxin OrtT D APECO78_18025 hypothetical protein K28274 ortT; orphan toxin OrtT D APECO78_02505 hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein D APECO78_05820 modulator of gene expression, with H-NS K05839 hha; haemolysin expression modulating protein D APECO78_05825 Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB D APECO78_16380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ecoa04090] C 01504 Antimicrobial resistance genes [BR:ecoa01504] D APECO78_07880 multidrug efflux system protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D APECO78_06425 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO78_06430 DNA-binding transcriptional activator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO78_11165 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D APECO78_09605 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO78_09610 DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO78_05835 acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D APECO78_05830 multidrug efflux system protein AcrB K18138 acrB; multidrug efflux pump D APECO78_14405 multidrug resistance outer membrane protein MdtQ K18139 oprM; outer membrane protein, multidrug efflux system D APECO78_05955 DNA-binding transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D APECO78_20140 DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D APECO78_20145 hypothetical protein K18141 acrE; membrane fusion protein, multidrug efflux system D APECO78_20150 multidrug efflux system protein AcrF K18142 acrF; multidrug efflux pump D APECO78_18995 outer membrane channel protein K12340 tolC; outer membrane protein D APECO78_15600 DNA-binding transcriptional activator EvgA K07690 evgA; two-component system, NarL family, response regulator EvgA D APECO78_21355 multidrug efflux system protein MdtE K18898 mdtE; membrane fusion protein, multidrug efflux system D APECO78_21360 multidrug transporter MdtF, RpoS-dependent K18899 mdtF; multidrug efflux pump D APECO78_11405 Multiple antibiotic resistance protein marA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO78_08635 outer membrane protein F K09476 ompF; outer membrane pore protein F D APECO78_13605 hypothetical protein K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ecoa00537] D APECO78_05420 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO78_09850 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APECO78_21385 cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:ecoa03200] D APECO78_07360 Integrase from phage K21039 int; Escherichia phage integrase [EC:2.7.7.- 3.1.-.-] D APECO78_06215 DNA packaging Nu1 K22014 Nu1; Enterobacteria phage terminase small subunit, DNA-packaging protein D APECO78_07495 phage terminase small subunit (DNA packaging protein) K22014 Nu1; Enterobacteria phage terminase small subunit, DNA-packaging protein D APECO78_11515 putative tail fiber chaperone; Qin prophage K26980 tfa; Enterobacteria phage tail fiber assembly protein D APECO78_03145 Putative endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO78_06235 bacteriophage lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO78_07475 Rz endopeptidase from lambdoid prophage DLP12 K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ecoa03100] D APECO78_t23089 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23109 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23187 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23197 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23229 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23239 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO78_t23119 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23183 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23201 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23203 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23207 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO78_t23171 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23173 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23175 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23177 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO78_t23111 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO78_t23113 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO78_t23241 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO78_t23165 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D APECO78_t23121 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23123 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23127 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23129 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO78_t23083 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23093 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23097 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23167 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23217 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO78_t23247 tRNA-His K14226 tRNA-His; tRNA His D APECO78_t23077 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23087 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23107 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23199 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23231 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23237 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO78_t23099 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23101 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23103 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23131 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23163 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23249 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO78_t23135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23139 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23143 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23145 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23147 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23195 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO78_t23125 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23133 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23211 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23213 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23215 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23221 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23223 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO78_t23091 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO78_t23219 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO78_t23179 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23181 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23233 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23251 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO78_t23149 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23151 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23153 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23169 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23209 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO78_t23079 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23227 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO78_t23243 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D APECO78_t23081 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO78_t23155 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO78_t23157 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO78_t23137 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23141 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23159 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23161 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23189 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23191 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23193 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO78_t23235 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D APECO78_r23267 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23271 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23273 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23275 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23277 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APECO78_r23279 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23281 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23283 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23285 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23287 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23289 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APECO78_r23253 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23255 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23257 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23263 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APECO78_r23265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D APECO78_02300 5-keto-D-gluconate-5-reductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D APECO78_02305 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D APECO78_18845 2,5-diketo-D-gluconate reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D APECO78_04450 dkgB; 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D APECO78_17270 dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D APECO78_06580 oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-] D APECO78_18790 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D APECO78_07855 putative dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D APECO78_22830 arylsulfatase regulator K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7] D APECO78_05605 oxidoreductase, NAD(P)-binding protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D APECO78_19210 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D APECO78_10960 putative oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D APECO78_03655 crotonobetainyl-CoA dehydrogenase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13] D APECO78_02390 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D APECO78_09260 solA; N-methyltryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D APECO78_03675 flavoprotein FixC K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D APECO78_12320 oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D APECO78_17440 oxidoreductase with FAD/NAD(P)-binding domain K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D APECO78_01165 quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D APECO78_18915 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D APECO78_10775 azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D APECO78_06615 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D APECO78_02070 Methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D APECO78_12685 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D APECO78_15330 GSH-dependent disulfide bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D APECO78_18735 S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D APECO78_19350 S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D APECO78_13635 TMAO/DMSO reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D APECO78_10800 cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17] D APECO78_21380 cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D APECO78_16115 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D APECO78_10495 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D APECO78_06610 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D APECO78_11135 osmotically inducible, stress-inducible membrane protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D APECO78_15885 dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D APECO78_20985 protein yhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D APECO78_07690 putative hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D APECO78_16490 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D APECO78_12810 dioxygenase subunit alpha yeaW K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239] D APECO78_12815 oxidoreductase K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239] D APECO78_19155 siderophore-interacting protein K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D APECO78_13320 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D APECO78_04055 multicopper oxidase K14588 cueO; cuproxidase [EC:1.16.3.4] D APECO78_00375 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D APECO78_17120 NADH:flavorubredoxin oxidoreductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D APECO78_16200 oxidoreductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D APECO78_21300 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D APECO78_02155 nrdG; anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D APECO78_00550 pyruvate formate lyase II activase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO78_07790 glycyl-radical enzyme activating protein family K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO78_08280 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO78_08135 HCP oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D APECO78_16120 hydrogenase 4 Fe-S subunit K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-] D APECO78_16130 hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D APECO78_16135 hyfC; hydrogenase 4 membrane subunit K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-] D APECO78_16140 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-] D APECO78_16150 hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D APECO78_16155 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D APECO78_16160 hydrogenase 4 subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-] D APECO78_16170 hydrogenase 4, Fe-S subunit K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-] D APECO78_16175 formate hydrogenlyase maturation protein HycH K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-] D APECO78_17305 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D APECO78_12130 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D APECO78_11340 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D APECO78_10860 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D APECO78_09205 opgC; glucans biosynthesis protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D APECO78_05230 lacA; galactoside O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18] D APECO78_05815 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D APECO78_11035 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D APECO78_06875 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D APECO78_02660 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D APECO78_19625 hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D APECO78_21560 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D APECO78_00805 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D APECO78_02250 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D APECO78_04595 acyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D APECO78_10955 N-acetyltransferase GCN5 K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D APECO78_08195 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D APECO78_10455 hydrolase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D APECO78_10420 putative glucosyltransferase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D APECO78_16660 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D APECO78_17745 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D APECO78_14905 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D APECO78_00155 putative sugar kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D APECO78_18950 ribokinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D APECO78_17275 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D APECO78_20660 fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D APECO78_12340 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D APECO78_19075 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D APECO78_22040 putative RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D APECO78_11175 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APECO78_11460 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APECO78_12765 putative diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APECO78_12355 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D APECO78_02950 phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D APECO78_00825 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D APECO78_15610 hypothetical protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D APECO78_03650 crotonobetainyl-CoA:carnitine CoA-transferase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D APECO78_09195 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D APECO78_06500 enterobactin/ferric enterobactin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D APECO78_05900 acetyl esterase K01066 aes; acetyl esterase [EC:3.1.1.-] D APECO78_07210 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D APECO78_12995 serine/threonine protein phosphatase 1 K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D APECO78_17260 serine/threonine-specific protein phosphatase 2 K07314 pphB; serine/threonine protein phosphatase 2 [EC:3.1.3.16] D APECO78_07780 sugar phosphatase SupH K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D APECO78_10190 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D APECO78_15515 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D APECO78_11170 cyclic-di-GMP phosphodiesterase K13243 dos; c-di-GMP-specific phosphodiesterase [EC:3.1.4.52] D APECO78_01220 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_05805 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_07835 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_09685 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_14605 phage resistance protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_15730 diguanylate cyclase/phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_16240 putative inner membrane protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_21435 diguanylate cyclase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO78_01340 hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D APECO78_11225 hypothetical protein K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D APECO78_22250 sulfatase/phosphatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D APECO78_18460 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D APECO78_03330 deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO78_09460 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO78_23025 DNase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO78_06975 putative esterase/lipase K01175 ybfF; esterase [EC:3.1.-.-] D APECO78_04625 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-] D APECO78_21445 endo-1,4-D-glucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D APECO78_06240 Qin prophage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO78_07470 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO78_11580 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO78_22125 alpha-glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D APECO78_00130 alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D APECO78_19205 alpha-glucosidase K03931 ygjK; glucosidase [EC:3.2.1.-] D APECO78_07185 alpha-mannosidase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-] D APECO78_07660 hypothetical protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-] D APECO78_20220 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D APECO78_12495 hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105] D APECO78_06705 hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D APECO78_18215 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D APECO78_02185 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D APECO78_19400 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D APECO78_19550 galactosamine-6-phosphate isomerase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-] D APECO78_20650 SIS family protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-] D APECO78_19080 putative adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D APECO78_13985 GDP-mannose mannosyl hydrolase NudD K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D APECO78_05755 cof family hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D APECO78_15075 nucleoside triphosphatase NudI K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-] D APECO78_16030 GDP-mannose pyrophosphatase NudK K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D APECO78_09395 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D APECO78_22620 regulatory ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D APECO78_17280 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D APECO78_00145 putative aldolase K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] D APECO78_07795 fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-] D APECO78_00525 fructose-6-phosphate aldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-] D APECO78_01765 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D APECO78_03640 carnitinyl-CoA dehydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D APECO78_18070 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D APECO78_17670 cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D APECO78_02685 hypothetical protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24] D APECO78_17640 L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D APECO78_00260 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D APECO78_20655 fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41] D APECO78_02615 putative ribulose-phosphate 3-epimerase K14587 sgcE; protein sgcE [EC:5.1.3.-] D APECO78_17105 gutQ; D-arabinose 5-phosphate isomerase K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D APECO78_00140 putative glucosamine isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D APECO78_17285 hypothetical protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D APECO78_03645 caiC; crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D APECO78_02135 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelat e ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D APECO78_20885 RNA 3'-terminal-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D APECO78_11965 electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D APECO78_11960 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D APECO78_11955 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D APECO78_21135 zntA; zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D APECO78_02180 magnesium-transporting ATPase MgtA K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D APECO78_04170 DNA-binding transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A D APECO78_08960 TMAO reductase system periplasmic protein TorT K11930 torT; periplasmic protein TorT D APECO78_05060 oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D APECO78_05065 electron transport protein with ferredoxin-like domai K18929 lldF; L-lactate dehydrogenase complex protein LldF D APECO78_05070 transporter K00782 lldG; L-lactate dehydrogenase complex protein LldG D APECO78_02680 hypothetical protein K22111 nanS; 9-O-acetyl-N-acetylneuraminic acid deacetylase C 99982 Energy metabolism D APECO78_00230 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D APECO78_06085 acyl-CoA synthetase K02381 fdrA; FdrA protein D APECO78_15010 2Fe-2S ferredoxin K11107 yfaE; ferredoxin D APECO78_11970 electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D APECO78_11975 electron transport complex protein RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D APECO78_11950 electron transport complex protein RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D APECO78_17130 electron transport protein HydN K05796 hydN; electron transport protein HydN D APECO78_22600 flavodoxin K06205 mioC; MioC protein D APECO78_18190 flavodoxin FldB K03840 fldB; flavodoxin II D APECO78_16165 hydrogenase 4 subunit H K12143 hyfH; hydrogenase-4 component H D APECO78_16375 scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins D APECO78_02150 cytochrome b562 K15536 cybC; soluble cytochrome b562 D APECO78_17200 formate hydrogenlyase subunit 2 K15827 hycB; formate hydrogenlyase subunit 2 D APECO78_17195 formate hydrogenlyase subunit K15828 hycC; formate hydrogenlyase subunit 3 D APECO78_17190 formate hydrogenlyase subunit 4 K15829 hycD; formate hydrogenlyase subunit 4 D APECO78_17185 Subunit 5 formate hydrogenlyase K15830 hycE; formate hydrogenlyase subunit 5 D APECO78_17180 formate hydrogenlyase complex iron-sulfur subunit K15831 hycF; formate hydrogenlyase subunit 6 D APECO78_17175 hydrogenase 3 and formate hydrogenase complex, HycG subunit K15832 hycG; formate hydrogenlyase subunit 7 D APECO78_17115 anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D APECO78_14865 assembly protein for periplasmic nitrate reductase K02570 napD; periplasmic nitrate reductase NapD D APECO78_14870 ferredoxin-type protein K02572 napF; ferredoxin-type protein NapF D APECO78_01285 heme lyase subunit NrfE K04016 nrfE; cytochrome c-type biogenesis protein NrfE D APECO78_01290 formate-dependent nitrite reductase complex subunit NrfF K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF D APECO78_01295 formate-dependent nitrite reductase complex subunit NrfG K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG D APECO78_06965 flavodoxin FldA K03839 fldA; flavodoxin I D APECO78_14840 cytochrome c-type protein NapC K02569 napC; NapC/NirT family cytochrome c D APECO78_14855 ferredoxin-type protein K02573 napG; ferredoxin-type protein NapG D APECO78_14850 quinol dehydrogenase membrane component K02574 napH; ferredoxin-type protein NapH D APECO78_03665 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit D APECO78_03680 ferredoxin-like protein FixX K03855 fixX; ferredoxin like protein D APECO78_12325 4Fe-4S ferredoxin K03855 fixX; ferredoxin like protein D APECO78_17445 4Fe-4S binding protein K03855 fixX; ferredoxin like protein D APECO78_01270 cytochrome c nitrite reductase pentaheme subunit K04013 nrfB; cytochrome c-type protein NrfB D APECO78_01275 formate-dependent nitrite reductase K04014 nrfC; protein NrfC D APECO78_12170 4Fe-4S ferredoxin-type protein K04014 nrfC; protein NrfC D APECO78_01280 formate-dependent nitrite reductase complex subunit NrfD K04015 nrfD; protein NrfD D APECO78_05050 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D APECO78_01865 isovaleryl CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D APECO78_16960 ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D APECO78_15800 sulfate transport protein CysZ K06203 cysZ; CysZ protein D APECO78_15950 ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter D APECO78_15960 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D APECO78_15920 carboxysome structural protein EutK K04025 eutK; ethanolamine utilization protein EutK D APECO78_15925 ethanolamine utilization protein EutL K04026 eutL; ethanolamine utilization protein EutL D APECO78_15970 ethanolamine catabolic microcompartment shell protein EutN K04028 eutN; ethanolamine utilization protein EutN D APECO78_16000 ethanolamine utilization protein EutP K04029 eutP; ethanolamine utilization protein EutP D APECO78_15995 ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ D APECO78_16005 carboxysome structural protein EutS K04031 eutS; ethanolamine utilization protein EutS D APECO78_04365 lyase K08234 yaeR; glyoxylase I family protein D APECO78_03830 leu operon leader peptide K05806 leuL; leu operon leader peptide D APECO78_10505 murein peptide amidase A K14054 mpaA; murein peptide amidase A D APECO78_18490 hypothetical protein K06997 yggS; PLP dependent protein D APECO78_19385 hypothetical protein K26607 cyuA; putative L-cysteine desulfidase C 99986 Glycan metabolism D APECO78_14010 putative colanic acid biosynthesis protein K13620 wcaD; putative colanic acid polymerase D APECO78_13945 wcaM; colanic acid biosynthesis protein K16711 wcaM; colanic acid biosynthesis protein WcaM D APECO78_10265 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D APECO78_10270 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D APECO78_07610 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D APECO78_21450 cellulose synthase regulator protein K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D APECO78_18380 nucleoside triphosphate hydrolase domain-containing protein K02173 yggC; putative kinase D APECO78_22840 putative protoheme IX biogenesis protein K02498 hemY; HemY protein D APECO78_23005 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D APECO78_23000 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D APECO78_19030 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D APECO78_00005 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D APECO78_10560 abgT; aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D APECO78_18865 FtsI repressor K04753 sufI; suppressor of ftsI D APECO78_22435 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D APECO78_16445 putative inner membrane protein K15977 K15977; putative oxidoreductase D APECO78_19345 hypothetical protein K15977 K15977; putative oxidoreductase D APECO78_16065 hydrolase K06999 K06999; phospholipase/carboxylesterase D APECO78_16665 protein lysine acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D APECO78_17095 DNA-binding transcriptional activator GutM K02466 gutM; glucitol operon activator protein D APECO78_20010 hypothetical protein K03623 yhcO; ribonuclease inhibitor D APECO78_06695 cold shock protein CspE K03704 cspA; cold shock protein D APECO78_08175 Cold shock-like protein cspD K03704 cspA; cold shock protein D APECO78_08930 cold shock-like protein CspH K03704 cspA; cold shock protein D APECO78_08935 cold shock protein CspG K03704 cspA; cold shock protein D APECO78_11570 cold shock DNA-binding protein K03704 cspA; cold shock protein D APECO78_11595 cold shock-like protein cspB K03704 cspA; cold shock protein D APECO78_11600 cold shock-like protein CspF K03704 cspA; cold shock protein D APECO78_12915 Cold shock-like protein cspC K03704 cspA; cold shock protein D APECO78_21590 RNA chaperone/anti-terminator K03704 cspA; cold shock protein D APECO78_19430 DNA-binding transcriptional activator TdcR K07591 tdcR; threonine dehydratase operon activator protein D APECO78_00740 anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D D APECO78_17210 formate hydrogenlyase regulatory protein HycA K15833 hycA; formate hydrogenlyase regulatory protein HycA D APECO78_17170 formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH D APECO78_05775 nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2 D APECO78_20825 transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D APECO78_21210 putative ABC transporter ATP-binding protein K13926 rbbA; ribosome-dependent ATPase C 99975 Protein processing D APECO78_10630 heat-inducible protein K03668 hslJ; heat shock protein HslJ D APECO78_08180 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D APECO78_05695 trigger factor K03545 tig; trigger factor D APECO78_13640 sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D APECO78_00205 putative formate dehydrogenase formation protein K02380 fdhE; FdhE protein D APECO78_16815 ssrA-binding protein K03664 smpB; SsrA-binding protein D APECO78_17225 hydrogenase assembly chaperone K04653 hypC; hydrogenase expression/formation protein HypC D APECO78_18740 hydrogenase 2 accessory protein HypG K04653 hypC; hydrogenase expression/formation protein HypC D APECO78_17230 hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D APECO78_17235 carbamoyl dehydratase HypE K04655 hypE; hydrogenase expression/formation protein HypE D APECO78_17125 carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases K04656 hypF; hydrogenase maturation protein HypF D APECO78_16955 glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH D APECO78_22680 ATP-dependent protease K07391 comM; magnesium chelatase family protein D APECO78_20575 hypothetical protein K07397 yhfA; putative redox protein D APECO78_20860 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D APECO78_04945 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D APECO78_18090 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D APECO78_10985 enzyme K11208 yncG; GST-like protein C 99976 Replication and repair D APECO78_05795 methylated-DNA-[protein]-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D APECO78_17610 flap endonuclease-like protein K01146 xni; protein Xni D APECO78_22020 hypothetical protein K03630 radC; DNA repair protein RadC D APECO78_22990 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D APECO78_08155 ATP-dependent OLD family endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D APECO78_19585 hypothetical protein K07460 yraN; putative endonuclease D APECO78_19620 endonuclease K07461 K07461; putative endonuclease D APECO78_20215 DNA protecting protein DprA K04096 smf; DNA processing protein D APECO78_02700 tyrosine recombinase K07357 fimB; type 1 fimbriae regulatory protein FimB D APECO78_02705 type 1 fimbriae regulator K07358 fimE; type 1 fimbriae regulatory protein FimE D APECO78_13780 DNA gyrase inhibitor K07470 sbmC; DNA gyrase inhibitor D APECO78_08230 recombination factor protein RarA K07478 ycaJ; putative ATPase D APECO78_20205 DNA topoisomerase K07479 yrdD; putative DNA topoisomerase D APECO78_06335 Site-specific recombinase resolvase family protein PinR K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D APECO78_11510 putative DNA-invertase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D APECO78_00450 iso-IS1 InsB protein, transposase K07480 insB; insertion element IS1 protein InsB D APECO78_00455 transposase K07480 insB; insertion element IS1 protein InsB D APECO78_02435 insertion element protein K07480 insB; insertion element IS1 protein InsB D APECO78_02440 transposase K07480 insB; insertion element IS1 protein InsB D APECO78_16855 IS1 transposase K07480 insB; insertion element IS1 protein InsB D APECO78_01135 IS2 repressor TnpA K07483 K07483; transposase D APECO78_02375 IS911 protein K07483 K07483; transposase D APECO78_02450 IS2 repressor TnpA K07483 K07483; transposase D APECO78_02480 putative transposase, IS3 family protein K07483 K07483; transposase D APECO78_03290 IS2 repressor TnpA K07483 K07483; transposase D APECO78_05360 IS2 repressor TnpA K07483 K07483; transposase D APECO78_07375 IS2 repressor TnpA K07483 K07483; transposase D APECO78_07530 Transposase IS3/IS911 family protein K07483 K07483; transposase D APECO78_09120 IS3 element protein InsE K07483 K07483; transposase D APECO78_09735 IS2 repressor TnpA K07483 K07483; transposase D APECO78_11220 IS2 repressor TnpA K07483 K07483; transposase D APECO78_11635 IS2 repressor TnpA K07483 K07483; transposase D APECO78_14675 IS2 repressor TnpA K07483 K07483; transposase D APECO78_16870 IS2 repressor TnpA K07483 K07483; transposase D APECO78_17885 IS2 repressor TnpA K07483 K07483; transposase D APECO78_19290 IS2 repressor TnpA K07483 K07483; transposase D APECO78_02470 putative transposase K07484 K07484; transposase D APECO78_02475 putative transposase K07484 K07484; transposase D APECO78_04570 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D APECO78_13455 putative IS609 transposase TnpA K07491 rayT; REP-associated tyrosine transposase D APECO78_02345 putative IS4 transposase; KpLE2 phage-like element K07495 K07495; putative transposase D APECO78_10875 putative transposase IS605 family protein K07496 K07496; putative transposase D APECO78_13450 putative transposase K07496 K07496; putative transposase D APECO78_01140 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_02380 transposase K07497 K07497; putative transposase D APECO78_02445 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_03285 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_05355 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_07380 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_07525 hypothetical protein K07497 K07497; putative transposase D APECO78_09115 IS3 element transposase K07497 K07497; putative transposase D APECO78_09740 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_11215 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_11630 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_14680 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_16865 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_17880 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_19285 IS2 transposase TnpB K07497 K07497; putative transposase D APECO78_11695 defective integrase; Qin prophage K14059 int; integrase C 99979 Viral proteins C 99998 Others D APECO78_10395 phage shock protein PspA K03969 pspA; phage shock protein A D APECO78_10410 peripheral inner membrane phage-shock protein K03971 pspD; phage shock protein D D APECO78_10415 thiosulfate:cyanide sulfurtransferase K03972 pspE; phage shock protein E D APECO78_05875 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D APECO78_15550 hypothetical protein K21990 yfdC; formate-nitrite transporter family protein D APECO78_00120 putative transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APECO78_00125 putative transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APECO78_18930 sugar transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APECO78_22130 transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APECO78_22825 transport protein YifK K03293 TC.AAT; amino acid transporter, AAT family D APECO78_12805 transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D APECO78_01585 transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO78_07070 dipeptide/tripeptide permease D K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO78_11990 inner membrane transporter YhiP K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO78_21260 dipeptide/tripeptide permease B K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO78_22255 transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D APECO78_03490 transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D APECO78_05510 branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D APECO78_07345 transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D APECO78_08010 transporter K07085 K07085; putative transport protein D APECO78_22285 transporter K07085 K07085; putative transport protein D APECO78_14250 hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D APECO78_10135 intracellular septation protein A K06190 ispZ; intracellular septation protein D APECO78_21150 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D APECO78_02025 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D APECO78_12485 cell division modulator K15722 cedA; cell division activator D APECO78_11675 regulator of cell division encoded by prophage K22304 dicB; cell division inhibition protein DicB D APECO78_09805 SpoVR family protein K06415 spoVR; stage V sporulation protein R D APECO78_11935 hypothetical protein K22718 blr; divisome-associated membrane protein D APECO78_21910 AmiB activator K22719 envC; murein hydrolase activator C 99993 Cell motility D APECO78_09485 hypothetical protein K07337 K07337; penicillin-binding protein activator D APECO78_08785 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins D APECO78_04140 chaperone protein EcpD K15540 ecpD; chaperone protein EcpD D APECO78_17585 SecY interacting protein Syd K15723 syd; SecY interacting protein Syd D APECO78_19055 glycogen synthesis protein GlgS K22720 glgS; surface composition regulator C 99995 Signaling proteins D APECO78_03995 ampE K03807 ampE; AmpE protein D APECO78_12960 ProP expression regulator K03607 proQ; ProP effector D APECO78_21255 universal stress protein A K06149 uspA; universal stress protein A D APECO78_13280 universal stress protein C K14064 uspC; universal stress protein C D APECO78_00370 universal stress protein UspD K14065 uspD; universal stress protein D D APECO78_10545 universal stress protein UspE K14055 uspE; universal stress protein E D APECO78_10610 universal stress protein F K14061 uspF; universal stress protein F D APECO78_06620 universal stress protein UspG K11932 uspG; universal stress protein G D APECO78_00095 GTP-binding protein K06207 typA; GTP-binding protein D APECO78_06890 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D APECO78_09085 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D APECO78_12710 PrkA family serine protein kinase K07180 prkA; serine protein kinase D APECO78_19085 putative signal transduction protein K07184 ygiM; SH3 domain protein D APECO78_03385 hypothetical protein K07186 smp; membrane protein D APECO78_11410 hypothetical protein K13630 marB; multiple antibiotic resistance protein MarB D APECO78_05640 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein D APECO78_02215 oxidoreductase K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein D APECO78_02775 DNA replication/recombination/repair protein K21637 iraD; anti-adapter protein IraD D APECO78_09645 anti-adapter protein IraM K21638 iraM; anti-adapter protein IraM D APECO78_09660 putative FAD-binding phosphodiesterase K21973 bluF; blue light- and temperature-responsive anti-repressor D APECO78_09665 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D APECO78_09670 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D APECO78_02455 hypothetical protein K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D APECO78_09675 hypothetical protein K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance C 99992 Structural proteins D APECO78_08225 outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D APECO78_09920 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D APECO78_15545 ABC transporter outer membrane lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D APECO78_22770 lipopolysaccharide biosynthesis protein WzzE K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D APECO78_12025 outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB D APECO78_04320 periplasmic chaperone K06142 hlpA; outer membrane protein D APECO78_17300 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD D APECO78_18035 peptidase K12943 ygeR; lipoprotein YgeR D APECO78_19660 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D APECO78_14220 hydrolase K07273 acm; lysozyme D APECO78_10145 outer membrane protein W K07275 ompW; outer membrane protein D APECO78_12440 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D APECO78_12830 lipoprotein K07285 slp; outer membrane lipoprotein D APECO78_21310 outer membrane lipoprotein K07285 slp; outer membrane lipoprotein D APECO78_05680 hypothetical protein K07286 yajG; uncharacterized lipoprotein D APECO78_14050 assembly protein K07289 asmA; AsmA protein D APECO78_21410 outer membrane biogenesis protein K07290 yhjG; AsmA family protein D APECO78_05960 nodulation efficiency family protein K07340 ybbJ; inner membrane protein D APECO78_21215 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein D APECO78_11810 putative transport protein K11744 tqsA; AI-2 transport protein TqsA D APECO78_10285 lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB D APECO78_12525 DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE D APECO78_03450 hypothetical protein K06143 creD; inner membrane protein D APECO78_14815 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D APECO78_14800 heme lyase subunit CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D APECO78_16310 putative regulatory protein K15539 rodZ; cytoskeleton protein RodZ D APECO78_20025 hypothetical protein K21695 aaeX; protein AaeX D APECO78_21335 acid-resistance membrane protein K21908 hdeD; membrane protein HdeD C 99994 Others D APECO78_22490 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D APECO78_13310 ferritin-like protein K02255 ftnB; ferritin-like protein 2 D APECO78_20475 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin D APECO78_09210 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D APECO78_01625 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D APECO78_13185 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D APECO78_01410 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D APECO78_03710 CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein D APECO78_22865 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D APECO78_09980 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D APECO78_15385 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D APECO78_03140 phage endolysin K03791 K03791; putative chitinase D APECO78_14720 phage encoded lysozyme K03791 K03791; putative chitinase D APECO78_21660 hypothetical protein K03796 bax; Bax protein D APECO78_09305 oxidoreductase K03810 mviM; virulence factor D APECO78_15160 acyltransferase K02348 elaA; ElaA protein D APECO78_16675 lipoprotein K05811 yfiM; putative lipoprotein D APECO78_09970 chaB; cation transport regulator K06197 chaB; cation transport regulator D APECO78_10735 putative hexapeptide repeat acetyltransferase K02617 paaY; phenylacetic acid degradation protein D APECO78_03315 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D APECO78_09140 hydrolase K04477 ycdX; putative hydrolase D APECO78_16640 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D APECO78_19175 tRNA-binding protein K06878 K06878; tRNA-binding protein D APECO78_10040 hypothetical protein K07001 K07001; NTE family protein D APECO78_04220 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D APECO78_12240 sufA; iron-sulfur cluster assembly scaffold protein K05997 sufA; Fe-S cluster assembly protein SufA D APECO78_12235 cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB D APECO78_12220 cysteine desulfurase activator complex subunit SufD K09015 sufD; Fe-S cluster assembly protein SufD D APECO78_06135 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D APECO78_12470 hypothetical protein K07038 K07038; inner membrane protein D APECO78_20685 hydrolase K07048 PTER; phosphotriesterase-related protein D APECO78_00170 hypothetical protein K07058 K07058; membrane protein D APECO78_21400 ribonuclease K07058 K07058; membrane protein D APECO78_01640 phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D APECO78_12210 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D APECO78_17675 CsdA-binding activator K02426 sufE; cysteine desulfuration protein SufE D APECO78_09240 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D APECO78_09620 hypothetical protein K07153 hflD; high frequency lysogenization protein D APECO78_03635 carnitine operon protein CaiE K08279 caiE; carnitine operon protein CaiE D APECO78_01455 hypothetical protein K04750 phnB; PhnB protein D APECO78_18640 hypothetical protein K11477 glcG; glc operon protein GlcG D APECO78_06380 bacteriophage N4 receptor, outer membrane subunit K11739 nfrA; bacteriophage N4 adsorption protein A D APECO78_06385 nfrB; bacteriophage N4 adsorption protein B K11740 nfrB; bacteriophage N4 adsorption protein B D APECO78_09225 secY/secA suppressor protein K12147 msyB; acidic protein MsyB D APECO78_02990 ferric iron reductase involved in ferric hydroximate transport K13255 fhuF; ferric iron reductase protein FhuF D APECO78_17555 (D)-glucarate dehydratase 2 GudX K13918 gudX; glucarate dehydratase-related protein D APECO78_20530 phi X174 lysis protein K03745 slyX; SlyX protein D APECO78_20210 hypothetical protein K03747 smg; Smg protein D APECO78_03435 hypothetical protein K05805 creA; CreA protein D APECO78_18455 hypothetical protein K02742 sprT; SprT protein D APECO78_15390 DedD protein K03749 dedD; DedD protein D APECO78_20730 cell division protein DamX K03112 damX; DamX protein D APECO78_14435 vancomycin high temperature exclusion protein K03748 sanA; SanA protein D APECO78_15405 hypothetical protein K03975 dedA; membrane-associated protein D APECO78_15155 hypothetical protein K05594 elaB; ElaB protein D APECO78_01535 hypothetical protein K08984 yjdF; putative membrane protein D APECO78_01850 hypothetical protein K08989 K08989; putative membrane protein D APECO78_10485 hypothetical protein K08990 ycjF; putative membrane protein D APECO78_21120 hypothetical protein K08993 yhhL; putative membrane protein D APECO78_04965 hypothetical protein K08996 yagU; putative membrane protein D APECO78_10035 hypothetical protein K09858 K09858; SEC-C motif domain protein D APECO78_05790 lipoprotein K09914 K09914; putative lipoprotein D APECO78_08870 hydrogenase-1 operon protein HyaF K03618 hyaF; hydrogenase-1 operon protein HyaF D APECO78_08865 hydrogenase-1 operon protein HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE D APECO78_01000 maltose regulon periplasmic protein K05775 malM; maltose operon periplasmic protein D APECO78_00960 phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE D APECO78_05455 hypothetical protein K14591 aroM; protein AroM D APECO78_01460 PhnA protein K06193 phnA; protein PhnA D APECO78_05045 hypothetical protein K21740 rclB; reactive chlorine resistance protein B D APECO78_05040 hypothetical protein K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D APECO78_00830 T3SS effector-like protein EspL K06867 K06867; uncharacterized protein D APECO78_05120 putative transcription factor K06867 K06867; uncharacterized protein D APECO78_12425 Ankyrin repeat protein B K06867 K06867; uncharacterized protein D APECO78_16860 hypothetical protein K06867 K06867; uncharacterized protein D APECO78_11210 putative arylsulfatase-activating protein K06871 K06871; uncharacterized protein D APECO78_22230 transcriptional regulator K06871 K06871; uncharacterized protein D APECO78_17500 hypothetical protein K06872 K06872; uncharacterized protein D APECO78_09015 Stress-induced protein, KGG, repeat protein K06884 K06884; uncharacterized protein D APECO78_10160 hypothetical protein K06884 K06884; uncharacterized protein D APECO78_04510 Hcp-like protein K06887 K06887; uncharacterized protein D APECO78_01880 esterase K06889 K06889; uncharacterized protein D APECO78_10515 hydrolase K06889 K06889; uncharacterized protein D APECO78_16400 hypothetical protein K06889 K06889; uncharacterized protein D APECO78_07600 hypothetical protein K06890 K06890; uncharacterized protein D APECO78_07605 hypothetical protein K06890 K06890; uncharacterized protein D APECO78_08000 Late control protein D protein K06905 D; Bacteriophage probable baseplate hub protein D APECO78_08485 Putative phage late control protein D K06905 D; Bacteriophage probable baseplate hub protein D APECO78_07995 bacteriophage tail protein GpU K06906 gpU; phage tail protein D APECO78_08480 gpU phage protein K06906 gpU; phage tail protein D APECO78_08455 major tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein D APECO78_08460 phage major tail tube protein FII K06908 FII; Bacteriophage tail tube protein D APECO78_10480 hypothetical protein K06918 K06918; uncharacterized protein D APECO78_08815 CoA-binding protein K06929 K06929; uncharacterized protein D APECO78_18355 hypothetical protein K06934 K06934; uncharacterized protein D APECO78_12060 hypothetical protein K06938 K06938; uncharacterized protein D APECO78_04970 ferredoxin K06940 K06940; uncharacterized protein D APECO78_14575 hypothetical protein K06940 K06940; uncharacterized protein D APECO78_13595 hydrolase K06950 K06950; uncharacterized protein D APECO78_12475 cation-acid symporter K06956 K06956; uncharacterized protein D APECO78_02625 nucleoside triphosphatase K06971 K06971; uncharacterized protein D APECO78_01565 acyltransferase K06975 K06975; uncharacterized protein D APECO78_09500 hypothetical protein K07000 K07000; uncharacterized protein D APECO78_18975 esterase YqiA K07000 K07000; uncharacterized protein D APECO78_14665 putative sulfatase K07014 K07014; uncharacterized protein D APECO78_20560 hydrolase K07019 K07019; uncharacterized protein D APECO78_13335 hypothetical protein K07039 K07039; uncharacterized protein D APECO78_16075 hypothetical protein K07054 K07054; uncharacterized protein D APECO78_20540 hypothetical protein K07070 K07070; uncharacterized protein D APECO78_15340 hypothetical protein K07071 K07071; uncharacterized protein D APECO78_00910 hypothetical protein K07074 K07074; uncharacterized protein D APECO78_19600 putative permease K07089 K07089; uncharacterized protein D APECO78_15455 hypothetical protein K07090 K07090; uncharacterized protein D APECO78_15320 putative phosphodiesterase K07095 K07095; uncharacterized protein D APECO78_02055 hypothetical protein K07109 K07109; uncharacterized protein D APECO78_18695 ybl137 K07109 K07109; uncharacterized protein D APECO78_13435 hypothetical protein K07112 K07112; uncharacterized protein D APECO78_13800 putative inner membrane protein K07112 K07112; uncharacterized protein D APECO78_07100 aidB regulatorAbrB K07120 K07120; uncharacterized protein D APECO78_19580 LppC family lipoprotein K07121 K07121; uncharacterized protein D APECO78_01305 hypothetical protein K07126 K07126; uncharacterized protein D APECO78_06800 hypothetical protein K07126 K07126; uncharacterized protein D APECO78_06815 hypothetical protein K07126 K07126; uncharacterized protein D APECO78_13160 hypothetical protein K07136 K07136; uncharacterized protein D APECO78_19895 Fe-S oxidoreductase K07139 K07139; uncharacterized protein D APECO78_08725 2Fe-2S cluster-containing protein K07140 K07140; MOSC domain-containing protein D APECO78_14475 hypothetical protein K07148 K07148; uncharacterized protein D APECO78_18570 hypothetical protein K07150 K07150; uncharacterized protein D APECO78_22390 hypothetical protein K08998 K08998; uncharacterized protein D APECO78_18500 hypothetical protein K09131 K09131; uncharacterized protein D APECO78_06735 hypothetical protein K09158 K09158; uncharacterized protein D APECO78_09765 hypothetical protein K09160 K09160; uncharacterized protein D APECO78_15285 hypothetical protein K09161 K09161; uncharacterized protein D APECO78_12760 hemolysin K09712 K09712; uncharacterized protein D APECO78_05440 hypothetical protein K09768 K09768; uncharacterized protein D APECO78_10120 hypothetical protein K09780 K09780; uncharacterized protein D APECO78_13575 hypothetical protein K09781 K09781; uncharacterized protein D APECO78_12715 hypothetical protein K09786 K09786; uncharacterized protein D APECO78_05860 hypothetical protein K09790 K09790; uncharacterized protein D APECO78_08565 hypothetical protein K09791 K09791; uncharacterized protein D APECO78_10840 hypothetical protein K09794 K09794; uncharacterized protein D APECO78_21915 hypothetical protein K09798 K09798; uncharacterized protein D APECO78_16805 hypothetical protein K09801 K09801; uncharacterized protein D APECO78_13770 hypothetical protein K09802 K09802; uncharacterized protein D APECO78_18320 oxidative stress defense protein K09807 K09807; uncharacterized protein D APECO78_08160 hypothetical protein K09824 virK; uncharacterized protein D APECO78_03485 hypothetical protein K09861 K09861; uncharacterized protein D APECO78_03950 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D APECO78_00760 hypothetical protein K09891 K09891; uncharacterized protein D APECO78_00060 GTPase activator K09894 K09894; uncharacterized protein D APECO78_18260 hypothetical protein K09895 K09895; uncharacterized protein D APECO78_00015 hypothetical protein K09896 K09896; uncharacterized protein D APECO78_22675 hypothetical protein K09897 K09897; uncharacterized protein D APECO78_20565 hypothetical protein K09898 K09898; uncharacterized protein D APECO78_15290 hypothetical protein K09899 K09899; uncharacterized protein D APECO78_10100 dsDNA-mimic protein K09901 K09901; uncharacterized protein D APECO78_09755 hypothetical protein K09902 K09902; uncharacterized protein D APECO78_14660 hypothetical protein K09904 K09904; uncharacterized protein D APECO78_13190 hypothetical protein K09907 K09907; uncharacterized protein D APECO78_19980 hypothetical protein K09908 K09908; uncharacterized protein D APECO78_08810 hypothetical protein K09909 K09909; uncharacterized protein D APECO78_04035 hypothetical protein K09910 K09910; uncharacterized protein D APECO78_08770 Ter macrodomain organizer matS-binding protein K09911 K09911; uncharacterized protein D APECO78_05290 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein D APECO78_09300 hypothetical protein K09915 K09915; uncharacterized protein D APECO78_12680 hypothetical protein K09916 K09916; uncharacterized protein D APECO78_12855 hypothetical protein K09917 K09917; uncharacterized protein D APECO78_13055 DNA damage-inducible protein YebG K09918 K09918; uncharacterized protein D APECO78_18985 dehydrogenase K09920 K09920; uncharacterized protein D APECO78_22885 hypothetical protein K09921 K09921; uncharacterized protein D APECO78_18535 hypothetical protein K09923 K09923; uncharacterized protein D APECO78_22455 hypothetical protein K09925 K09925; uncharacterized protein D APECO78_08560 hypothetical protein K09927 K09927; uncharacterized protein D APECO78_14975 hypothetical protein K09934 K09934; uncharacterized protein D APECO78_01810 inner membrane protein K09937 K09937; uncharacterized protein D APECO78_14130 hypothetical protein K09946 K09946; uncharacterized protein D APECO78_15785 hypothetical protein K09954 K09954; uncharacterized protein D APECO78_05930 hypothetical protein K09973 K09973; uncharacterized protein D APECO78_00510 hypothetical protein K09974 K09974; uncharacterized protein D APECO78_12540 hypothetical protein K09975 K09975; uncharacterized protein D APECO78_10650 hypothetical protein K09978 K09978; uncharacterized protein D APECO78_19615 hypothetical protein K09979 K09979; uncharacterized protein D APECO78_01835 cytoplasmic protein K09980 K09980; uncharacterized protein D APECO78_02665 hypothetical protein K09982 K09982; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 17, 2025