+E Transcription factors KO
#
Transcription Factors - Escherichia coli APEC O78 (APEC)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D APECO78_02525 methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D APECO78_13590 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D APECO78_03770 arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D APECO78_02885 regulator of the 4HPA-hydroxylase operon K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D APECO78_00290 transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D APECO78_00285 transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D APECO78_12505 DNA-binding transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D APECO78_01505 DNA-binding transcriptional activator AdiY K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D APECO78_15915 transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D APECO78_06365 DNA-binding transcriptional activator EnvY K11920 envY; AraC family transcriptional regulator
D APECO78_01225 DNA-binding transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D APECO78_11405 Multiple antibiotic resistance protein marA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D APECO78_03430 right oriC-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D APECO78_10655 putative DNA-binding transcriptional dual regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D APECO78_05055 DNA-binding transcriptional regulator, ARAC-type K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D APECO78_21365 DNA-binding transcriptional activator GadW K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D APECO78_21370 DNA-binding transcriptional regulator GadX K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D APECO78_01515 DNA-binding transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D APECO78_12745 DNA-binding transcriptional regulator, ARAC-type K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D APECO78_14900 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D APECO78_17660 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D APECO78_22710 DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D APECO78_22970 DNA-binding transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D APECO78_03545 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D APECO78_00605 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D APECO78_18290 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D APECO78_03835 leuO; leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D APECO78_16415 DNA-binding transcriptional regulator HcaR K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D APECO78_19425 DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D APECO78_06015 DNA-binding transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D APECO78_05210 DNA-binding transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D APECO78_10230 transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D APECO78_13735 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D APECO78_10575 DNA-binding transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D APECO78_12795 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D APECO78_13740 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D APECO78_02780 cell density-dependent motility repressor K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D APECO78_20030 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D APECO78_19110 transcriptional activator TtdR K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D APECO78_22670 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D APECO78_10520 LysR family transcriptional regulator K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D APECO78_07870 deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D APECO78_20900 DNA-binding transcriptional repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D APECO78_14160 galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D APECO78_19490 DNA-binding transcriptional regulator AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D APECO78_17645 DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D APECO78_17100 DNA-binding transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D APECO78_01885 transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D APECO78_00160 transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D APECO78_05245 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D APECO78_14470 DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D APECO78_17795 DNA-binding transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D APECO78_21655 putative xyl operon regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D APECO78_22655 transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D APECO78_00425 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D APECO78_03850 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D APECO78_02175 trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D APECO78_17135 DNA-binding transcriptional repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D APECO78_12115 DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D APECO78_20980 gluconate operon transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D APECO78_02290 L-idonate regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D APECO78_19180 DNA-binding transcriptional repressor EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D APECO78_11910 DNA-binding transcriptional repressor MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D APECO78_11440 transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D APECO78_22280 DNA-binding transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D APECO78_01435 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D APECO78_20665 DNA-binding transcriptional regulator FrlR K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D APECO78_07175 DNA-binding transcriptional repressor MngR K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D APECO78_18935 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D APECO78_09800 Fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D APECO78_04005 transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D APECO78_18660 DNA-binding transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D APECO78_02765 DNA-binding transcriptional repressor UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D APECO78_19310 DNA-binding transcriptional repressor ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D APECO78_21865 putative L-lactate dehydrogenase operon regulatory protein K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D APECO78_22335 DNA-binding transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D APECO78_19945 transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D APECO78_10965 colanic acid/biofilm transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D APECO78_16910 GntR family transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D APECO78_11485 hypothetical protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D APECO78_02940 GntR family transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D APECO78_05090 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D APECO78_05840 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D APECO78_22035 division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D APECO78_09055 RutR transcriptional dual regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D APECO78_12065 transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D APECO78_11900 repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D APECO78_20140 DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D APECO78_02220 TetR family transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D APECO78_09515 hypothetical protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D APECO78_00615 putative transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D APECO78_01990 putative transcriptional regulator K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
D APECO78_07650 DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D APECO78_07900 putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D APECO78_22605 hypothetical protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D APECO78_08215 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D APECO78_05760 LRP-like transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D APECO78_13365 DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D APECO78_05000 transcriptional regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D APECO78_13545 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D APECO78_09170 DNA-binding transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D APECO78_21315 hypothetical protein K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D APECO78_02985 LuxR family transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D APECO78_20880 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D APECO78_21340 DNA-binding transcriptional activator K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D APECO78_11400 DNA-binding transcriptional repressor MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D APECO78_12030 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D APECO78_17005 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
C MerR family
D APECO78_05955 DNA-binding transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D APECO78_20250 zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D APECO78_01230 redox-sensitivie transcriptional activator Soxr K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D APECO78_14345 transcriptional regulator MirA K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D APECO78_09655 MerR family transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D APECO78_06955 ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D APECO78_01050 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D APECO78_00835 Acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D APECO78_05250 DNA-binding transcriptional activator MhpR K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D APECO78_06025 DNA-binding transcriptional repressor AllR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D APECO78_12940 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D APECO78_02605 putative transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D APECO78_21685 DNA-binding transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D APECO78_20580 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D APECO78_10550 fumarate/nitrate reduction transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D APECO78_14535 DNA-binding transcriptional activator YeiL K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D APECO78_16385 DNA-binding transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D APECO78_01820 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D APECO78_21290 DNA-binding transcriptional repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D APECO78_10885 DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D APECO78_07755 manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D APECO78_01370 DNA-binding transcriptional repressor RpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D APECO78_15865 transcriptional regulator MurR K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D APECO78_13080 DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D APECO78_00645 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D APECO78_20125 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D APECO78_03415 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D APECO78_05175 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D APECO78_13675 transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D APECO78_19780 DNA-binding transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D APECO78_03795 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D APECO78_03400 bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D APECO78_18885 HTH-type transcriptional regulator ygiT K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D APECO78_10370 DNA-binding transcriptional repressor PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D APECO78_11290 antitoxin HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D APECO78_17150 HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D APECO78_19215 DNA-binding transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D APECO78_16180 DNA-binding transcriptional activator, formate sensing K12146 hyfR; hydrogenase-4 transcriptional activator
D APECO78_17110 anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D APECO78_17240 formate hydrogenlyase transcriptional activator FhlA K15836 fhlA; formate hydrogenlyase transcriptional activator
D APECO78_04250 carbohydrate diacid transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator
D APECO78_07300 DNA-binding transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D APECO78_21585 transcriptional regulator K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D APECO78_21195 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D APECO78_00470 Transcriptional repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D APECO78_09060 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
D APECO78_22485 transcriptional antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D APECO78_00240 frv operon regulatory protein K18531 frvR; putative frv operon regulatory protein
C Others
D APECO78_05305 regulator protein FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D APECO78_14240 transcriptional repressor RcnR to maintain nickel and cobalt homeostasis K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D APECO78_05685 regulator of murein genes K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D APECO78_16830 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APECO78_23030 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D APECO78_20000 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D APECO78_06920 N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D APECO78_11770 DNA-binding transcriptional repressor DgsA K15545 mlc; transcriptional regulator of PTS gene
D APECO78_21835 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor
D APECO78_10490 DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D APECO78_01600 DNA-binding transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D APECO78_17890 transcriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D APECO78_17875 transcriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D APECO78_16110 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D APECO78_10730 DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D APECO78_10390 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D APECO78_10405 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D APECO78_11305 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor
D APECO78_09870 DNA-binding transcriptional regulator DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D APECO78_06630 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D APECO78_18475 hypothetical protein K07735 algH; putative transcriptional regulator
D APECO78_03630 DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF
D APECO78_04165 DnaK transcriptional regulator DksA K06204 dksA; RNA polymerase-binding transcription factor
D APECO78_05575 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D APECO78_04630 DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D APECO78_20895 transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D APECO78_03855 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
D APECO78_18895 transcriptional regulator K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0