+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Escherichia coli O145:H28 RM13514 (EHEC)
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ACRISPR-Cas system
B Universal Cas proteins
C ECRM13514_3610 ygbT; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C ECRM13514_3609 ygbF; CRISPR-associated protein, Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D ECRM13514_3616 ygbB; CRISPR-associated helicase Cas3, protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D ECRM13514_3614 cse1; CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D ECRM13514_3613 cse2; CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D ECRM13514_3612 cse4; CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D ECRM13514_3611 cse3; CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C ECRM13514_2427 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C ECRM13514_2430 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C ECRM13514_2431 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D ECRM13514_4331 dam; Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D ECRM13514_4215 yhdJ; Adenine-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECRM13514_2047 DNA methyl transferase, phage-associated K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECRM13514_5730 Adenine-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECRM13514_4994 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ECRM13514_5820 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ECRM13514_2517 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C ECRM13514_2869 putative Dnase K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C ECRM13514_5223 putative DNase K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D ECRM13514_3114 hypothetical protein K18920 hokA; protein HokA
D ECRM13514_1231 hypothetical protein K18920 hokA; protein HokA
D ECRM13514_2466 hypothetical protein K18920 hokA; protein HokA
D ECRM13514_6031 hypothetical protein K18920 hokA; protein HokA
D ECRM13514_4555 small toxic polypeptide K18920 hokA; protein HokA
D ECRM13514_0601 HokE protein K18922 hokE; protein HokE
C SymE-SymR
C Ldr-Rdl
D ECRM13514_1583 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D ECRM13514_4527 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
D ECRM13514_1776 ydaC; Phage protein K19780 ralA; antisense regulator of RalR protein
B Type II TA system
C MazF-MazE
D ECRM13514_3641 chpA; Programmed cell death toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ECRM13514_3642 chpR; Programmed cell death antitoxin K07172 mazE; antitoxin MazE
C ChpB-ChpS
D ECRM13514_5489 chpB; Programmed cell death toxin ChpB K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D ECRM13514_4359 pemK; Programmed cell death toxin PemK K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D ECRM13514_5488 chpS; Programmed cell death antitoxin ChpS K18842 chpS; antitoxin ChpS
D ECRM13514_4358 hypothetical protein K18842 chpS; antitoxin ChpS
C YhaV-PrlF
D ECRM13514_4091 yhaV; Uncharacterized protein yhaV K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D ECRM13514_4090 sohA; SohA suppressor protein K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
D ECRM13514_5500 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
C YafQ-dinJ
C YoeB-YefM
D ECRM13514_2737 YoeB toxin protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D ECRM13514_2738 YefM protein (antitoxin to YoeB) K19159 yefM; antitoxin YefM
C HipA-HipB
D ECRM13514_1885 hipB; HipB protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
D ECRM13514_1961 hypothetical protein K18843 hicB; antitoxin HicB
C YafO-YafN
C Hha-TomB
D ECRM13514_0383 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D ECRM13514_5362 Putative hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D ECRM13514_0382 ybaJ; Putative cytoplasmic protein K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D ECRM13514_1733 pspC; Phage shock protein C K03973 pspC; phage shock protein C
D ECRM13514_1732 pspB; Phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
D ECRM13514_0051 ccdB; CcdB toxin protein K19163 ccdB; toxin CcdB
D ECRM13514_0050 ccdA; CcdA protein (antitoxin to CcdB) K19164 ccdA; antitoxin CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
D ECRM13514_3566 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D ECRM13514_4045 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D ECRM13514_3564 Putative cytoplasmic protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECRM13514_4044 ygjM; Putative cytoplasmic protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECRM13514_2601 hypothetical protein K21498 higA-1; antitoxin HigA-1
D ECRM13514_0360 ybaQ; HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D ECRM13514_1925 yddM; HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
D ECRM13514_3923 ygiU; Toxin mRNA interferase YgiU K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D ECRM13514_3922 ygiT; Antitoxin YgiT K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
C VapC-VapB
D ECRM13514_5788 vagD; plasmid maintenance protein VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D ECRM13514_5789 vagC; plasmid maintenance protein VagC K18829 mvpT; antitoxin VapB
C PezT-PezA
D ECRM13514_5156 putative enolase K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D ECRM13514_5517 yjgK; Protein YjgK, linked to biofilm formation K19334 tabA; biofilm protein TabA
D ECRM13514_0883 hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D ECRM13514_1350 bssS; Putative cytoplasmic protein K12148 bssS; biofilm regulator BssS
D ECRM13514_0913 bssR; Biofilm regulator bssR K19688 bssR; biofilm regulator BssR
D ECRM13514_1405 ycfR; Putative outer membrane protein K12151 bhsA; multiple stress resistance protein BhsA
D ECRM13514_0099 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ECRM13514_4203 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D ECRM13514_3920 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D ECRM13514_3931 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D ECRM13514_3225 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
D ECRM13514_1312 yeeV; YeeV toxin protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D ECRM13514_3968 yeeV_3; YeeV toxin protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D ECRM13514_2647 yeeV_2; YeeV toxin protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D ECRM13514_2646 yeeU_2; YeeU protein (antitoxin to YeeV) K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D ECRM13514_3969 yeeU_3; YeeU protein (antitoxin to YeeV) K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D ECRM13514_1311 yeeU; YeeU protein (antitoxin to YeeV) K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
C CptA-CptB
D ECRM13514_3754 Putative inner membrane protein K19168 cptA; toxin CptA
D ECRM13514_3755 ygfY; YgfY K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
D ECRM13514_5345 hypothetical protein K18839 ghoT; toxin GhoT
D ECRM13514_5344 hypothetical protein K18840 ghoS; antitoxin GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C ECRM13514_3362 yfhO; Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023