+F	Repair protein	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; DNA Repair and Recombination Proteins - Escherichia coli APEC O1 (APEC)</h2>
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A<b>Eukaryotic type</b>
B  SSBR (single strand breaks repair)
C    Direct repair
D      APECO1_488 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase	K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] 
D      APECO1_1367 phrB; deoxyribodipyrimidine photolyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] 
C    BER (base exicision repair)
D      DNA glycosylases
E        APECO1_3952 ung; uracil-DNA-glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] 
E        APECO1_3560 mutY; A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] 
E        APECO1_716 nth; endonuclease III; specific for apurinic and/or apyrimidinic sites	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] 
D      AP endonucleases
D      Long Patch-BER factors
E        DNA polymerase delta complex
E        DNA polymerase epsilon complex
D      Short Patch-BER factors
D      Other BER factors
C    NER (nucleotide excision repair)
D      GGR (global genome repair) factors
E        XPC-HR23B-CETN2 complex
E        Cul4-DDB2 complex
E        NER4 complex
D      TCR (transcription coupled repair) factors
E        DNA-directed RNA polymerase II complex
E        Cul4-CSA complex
E        Other TCR factor
D      TFIIH complex
D      RPA (replication factor A)
D      Other NER factors
C    MMR (mismatch excision repair)
D      Mismatch and loop recognition factors
D      MutL homologs
D      DNA polymerase delta complex
D      RPA (replication factor A)
D      RFC (replication factor C)
D      Other MMR factors
B  DSBR (double strand breaks repair)
C    HR (homologous recombination)
D      MRN(MRX) complex
D      BRCA1-core complex
D      BRCA1-A complex
D      BRCA1-B complex
D      BRCA1-C complex
D      BRCA complex
D      RecA family proteins
D      Rad52 family proteins
D      Rad54 family proteins
D      RecQ family DNA helicases
D      Bloom's syndrome complex (BTR)
D      RPA (replication factor A)
D      Protein phosphatase 4
D      AP-5 complex
D      SMC5-SMC6 complex
D      Other HR factors
C    NHEJ (non-homologous end-joining)
D      DNA-PK complex
D      MRX complex
D      DNA Ligase 4 complex
D      X-family DNA polymerases
D      Other NHEJ factors
C    FA (Fanconi anemia) pathway
D      FA core complex
D      FA core complex binding factors
D      Bloom's syndrome complex (BTR)
D      FANCD2-I complex
D      Downstream FA components
D      Other FA pathway factors
C    Other DSBR factors
D      Protein phosphatase 6
D      Ubiquitin ligases
D      Others
B  TLS (translesion DNA synthesis) factors
C    Y-family DNA polymerases
C    B-family DNA polymerases
C    A-family DNA polymerase
C    Rad6 epistasis group
C    Other TLS factors
B  Check point factors
C    Rad9-Hus1-Rad1 complex
C    HRAD17(Rad24)-RFC complex
C    Rad17-Mec3-Ddc1 complex
C    FPC (fork protection complex)
C    Triple T complex
C    BAG6-UBL4A-GET4 complex
C    Other check point factors
B  Other factors with a suspected DNA repair function
C    DNA polymerases
C    Nucleases
C    Helicases
C    PSO4 complex
C    Modulation of nucleotide pools
D      APECO1_1887 mutT; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] 
D      APECO1_2821 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23] 
#
A<b>Prokaryotic type</b>
B  SSBR (single strand breaks repair)
C    Direct repair
D      APECO1_488 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase	K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] 
D      APECO1_4346 ada; Ada transcriptional dual regulator / O-6-methylguanine-DNA methyltransferase	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] 
D      APECO1_1367 phrB; deoxyribodipyrimidine photolyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] 
D      APECO1_4347 alkB; AlkB repair system protein for alkylated DNA and RNA	K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] 
C    BER (base exicision repair)
D      DNA glycosylases
E        APECO1_3952 ung; uracil-DNA-glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] 
E        APECO1_3347 ygjF; G/U mismatch-specific DNA glycosylase	K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] 
E        APECO1_1159 alkA; 3-methyl-adenine DNA glycosylase II	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] 
E        APECO1_3560 mutY; A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] 
E        APECO1_2899 tag; 3-methyl-adenine DNA glycosylase I, constitutive	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] 
E        APECO1_2824 mutM; formamidopyrimidine-DNA glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] 
E        APECO1_1361 nei; endonuclease VIII	K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] 
E        APECO1_716 nth; endonuclease III; specific for apurinic and/or apyrimidinic sites	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] 
D      AP endonucleases
E        APECO1_818 xthA; exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] 
E        APECO1_4393 yeiH; conserved hypothetical protein	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] 
E        APECO1_2477 nfi; endonuclease V	K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] 
D      RecJ
E        APECO1_3635 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
D      DNA ligase
E        APECO1_4135 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
E        APECO1_2814 yicF; NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
D      DNA polymerase I
E        APECO1_2598 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7] 
C    NER (nucleotide excision repair)
D      GGR (global genome repair) factors
E        APECO1_2398 excinuclease ABC subunit A	K03701 uvrA; excinuclease ABC subunit A 
E        APECO1_1310 uvrB; excision nuclease subunit B	K03702 uvrB; excinuclease ABC subunit B 
E        APECO1_955 uvrC; excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C 
E        APECO1_810 thrL; endonuclease of nucleotide excision repair	K05984 cho; excinuclease Cho [EC:3.1.25.-] 
E        APECO1_2663 uvrD; DNA-dependent ATPase I and helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] 
E        APECO1_O1CoBM78 conserved hypothetical protein	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] 
E        APECO1_2598 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7] 
E        APECO1_4135 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
E        APECO1_2814 yicF; NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
D      TCR (transcription coupled repair) factors
E        DNA-directed RNA polymerase complex (RNAP)
F          APECO1_2486 rpoB; DNA-directed RNA polymerase beta chain protein RpoB	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
F          APECO1_2485 rpoC; RNA polymerase, beta prime subunit RpoC	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
F          APECO1_3152 rpoA; RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
F          APECO1_2812 rpoZ; RNA polymerase, omega subunit	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] 
E        TRCF (transcription-repair coupling factor)
F          APECO1_195 mfd; transcription-repair coupling factor; mutation frequency decline	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] 
C    MMR (mismatch excision repair)
D      Mismatch and loop recognition factors
E        APECO1_3791 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS 
D      Molecular matchmaker
E        APECO1_2221 mutL; MutL, enzyme in methyl-directed mismatch repair	K03572 mutL; DNA mismatch repair protein MutL 
D      Strand discrimination factor
E        APECO1_3674 mutH; DNA mismatch repair protein MutH	K03573 mutH; DNA mismatch repair protein MutH 
D      DNA exonucleases
E        APECO1_1109 sbcB; exonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
E        APECO1_4017 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] 
E        APECO1_895 exoX; exodeoxyribonuclease X	K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] 
D      DNA polymerase III holoenzyme
E        APECO1_1803 dnaE; DNA polymerase III alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] 
E        APECO1_2756 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] 
E        APECO1_2135 holC; DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] 
E        APECO1_1415 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] 
E        APECO1_180 holB; DNA polymerase III, delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] 
E        APECO1_1775 dnaQ; DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        APECO1_O1CoBM130 yacC; YacC	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        APECO1_1545 dnaX; DNA polymerase III subunits gamma and tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] 
D      DNA ligase
E        APECO1_4135 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
E        APECO1_2814 yicF; NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
D      Other MMR factors
E        APECO1_2663 uvrD; DNA-dependent ATPase I and helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] 
E        APECO1_O1CoBM78 conserved hypothetical protein	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] 
E        APECO1_2397 ssb; single strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein 
E        APECO1_O1CoBM14 ssb; Ssb	K03111 ssb; single-strand DNA-binding protein 
E        APECO1_3076 dam; DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
E        APECO1_O1R219 dam; DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
E        APECO1_997 vsr; DNA mismatch endonuclease, patch repair protein	K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] 
B  DSBR (double strand breaks repair)
C    HR (homologous recombination)
D      RecBC pathway proteins
E        APECO1_3685 recB; exodeoxyribonuclease V beta chain	K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
E        APECO1_3683 recC; exodeoxyribonuclease V gamma chain	K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
E        APECO1_3686 recD; exodeoxyribonuclease V alpha chain	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
E        APECO1_3827 recA; DNA strand exchange and recombination protein with protease and nuclease activity	K03553 recA; recombination protein RecA 
E        APECO1_911 ruvA; Holliday junction DNA helicase motor protein	K03550 ruvA; holliday junction DNA helicase RuvA 
E        APECO1_910 ruvB; Holliday junction DNA helicase ruvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
E        APECO1_913 ruvC; crossover junction endodeoxyribonuclease	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
E        APECO1_239 rusA; endonuclease RUS	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
E        APECO1_386 rusA; endodeoxyribonuclease RusA	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
E        APECO1_2038 bacteriophage V crossover junction endodeoxyribonuclease	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
E        APECO1_1033 Holliday junction resolvase	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
E        APECO1_4193 Holliday junction resolvase	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
E        APECO1_3880 bacteriophage V crossover junction endodeoxyribonuclease	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
E        APECO1_2535 priA; primosome factor n' (replication factor Y)	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
E        APECO1_2191 priB; primosomal replication protein N	K02686 priB; primosomal replication protein N 
E        APECO1_1548 priC; primosomal replication protein N''	K04067 priC; primosomal replication protein N'' 
E        APECO1_2062 dnaT; primosomal protein I	K02317 dnaT; DNA replication protein DnaT 
E        APECO1_1109 sbcB; exonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
E        APECO1_1613 sbcC; ATP-dependent dsDNA exonuclease	K03546 sbcC; DNA repair protein SbcC/Rad50 
E        APECO1_1612 sbcD; ATP-dependent dsDNA exonuclease	K03547 sbcD; DNA repair protein SbcD/Mre11 
D      RecFOR pathway proteins
E        APECO1_3827 recA; DNA strand exchange and recombination protein with protease and nuclease activity	K03553 recA; recombination protein RecA 
E        APECO1_1992 radA; DNA repair protein RadA	K04485 radA; DNA repair protein RadA/Sms 
E        APECO1_2757 recF; recombination protein F	K03629 recF; DNA replication and repair protein RecF 
E        APECO1_2809 recG; ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
E        APECO1_3635 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
E        APECO1_3966 recO; gap repair protein RecO	K03584 recO; DNA repair protein RecO (recombination protein O) 
E        APECO1_1543 recR; recombination protein RecR	K06187 recR; recombination protein RecR 
E        APECO1_3918 recN; DNA recombination and repair protein RecN	K03631 recN; DNA repair protein RecN (Recombination protein N) 
E        APECO1_1616 rdgC; recombination associated protein	K03554 rdgC; recombination associated protein RdgC 
E        APECO1_911 ruvA; Holliday junction DNA helicase motor protein	K03550 ruvA; holliday junction DNA helicase RuvA 
E        APECO1_910 ruvB; Holliday junction DNA helicase ruvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
E        APECO1_913 ruvC; crossover junction endodeoxyribonuclease	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
D      AddAB pathway proteins
D      Other HR factor
E        APECO1_1211 hypothetical protein	K15342 cas1; CRISP-associated protein Cas1 
E        APECO1_4371 yejH; putative ATP-dependet helicase	K19789 radD; DNA repair protein RadD 
D      Archaeal homologous recombinant proteins
E        APECO1_1613 sbcC; ATP-dependent dsDNA exonuclease	K03546 sbcC; DNA repair protein SbcC/Rad50 
E        APECO1_1612 sbcD; ATP-dependent dsDNA exonuclease	K03547 sbcD; DNA repair protein SbcD/Mre11 
E        APECO1_2131 yjgR; predicted ATPase	K06915 herA; DNA double-strand break repair helicase HerA and related ATPase 
C    NHEJ (non-homologous end-joining)
D      Two-component NHEJ DNA repair complex
D      SHIIR (short-homology-independent illegitimate recombination)
E        Facilitator
F          APECO1_4329 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] 
F          APECO1_2758 gyrB; DNA gyrase subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] 
F          APECO1_434 topA; DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
E        Supressor
F          APECO1_2475 DNA-binding protein HU-alpha	K05787 hupA; DNA-binding protein HU-alpha 
F          APECO1_1571 hupB; DNA-binding protein HU-beta, NS1 (HU-1)	K03530 hupB; DNA-binding protein HU-beta 
D      SHDIR (short-homology-dependent illegitimate recombination)
E        RecET pathway
F          APECO1_500 recE; Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease	K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-] 
F          APECO1_4025 RecT-like protein	K07455 recT; recombination protein RecT 
F          APECO1_499 recT; recombinational DNA repair protein	K07455 recT; recombination protein RecT 
F          APECO1_3635 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
F          APECO1_3966 recO; gap repair protein RecO	K03584 recO; DNA repair protein RecO (recombination protein O) 
F          APECO1_1543 recR; recombination protein RecR	K06187 recR; recombination protein RecR 
F          APECO1_4135 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
F          APECO1_2814 yicF; NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
E        Facilitator
F          APECO1_3177 fis; DNA-binding protein	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein 
E        Supressor
F          APECO1_1109 sbcB; exonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
F          APECO1_2654 recQ; ATP-dependent DNA helicase	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
F          APECO1_2398 excinuclease ABC subunit A	K03701 uvrA; excinuclease ABC subunit A 
F          APECO1_1310 uvrB; excision nuclease subunit B	K03702 uvrB; excinuclease ABC subunit B 
F          APECO1_351 hns; H-ns	K03746 hns; DNA-binding protein H-NS 
B  TLS (translesion DNA synthesis) factors
C    Y-family DNA polymerases
D      APECO1_1738 dinB; DNA polymerase IV	K02346 dinB; DNA polymerase IV [EC:2.7.7.7] 
D      APECO1_296 umuC; mutagenesis and repair protein UmuC	K03502 umuC; DNA polymerase V 
D      APECO1_O1R136 mucB; UV protection and repair protein	K03502 umuC; DNA polymerase V 
D      APECO1_295 umuD; mutagenesis and repair protein UmuD	K03503 umuD; DNA polymerase V [EC:3.4.21.-] 
D      APECO1_O1R135 mucA; UV protection and repair protein	K03503 umuD; DNA polymerase V [EC:3.4.21.-] 
C    Other SOS response factors
D      APECO1_3827 recA; DNA strand exchange and recombination protein with protease and nuclease activity	K03553 recA; recombination protein RecA 
D      APECO1_2426 lexA; LexA repressor	K01356 lexA; repressor LexA [EC:3.4.21.88] 
D      APECO1_2039 conserved hypothetical protein	K01356 lexA; repressor LexA [EC:3.4.21.88] 
D      APECO1_3879 conserved hypothetical protein	K01356 lexA; repressor LexA [EC:3.4.21.88] 
D      APECO1_3918 recN; DNA recombination and repair protein RecN	K03631 recN; DNA repair protein RecN (Recombination protein N) 
D      APECO1_1924 polB; DNA polymerase II	K02336 polB; DNA polymerase II [EC:2.7.7.7] 
D      APECO1_2397 ssb; single strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein 
D      APECO1_O1CoBM14 ssb; Ssb	K03111 ssb; single-strand DNA-binding protein 
D      APECO1_2816 dinD; DNA-damage-inducible protein	K14623 dinD; DNA-damage-inducible protein D 
D      APECO1_143 dinI; DinI	K12149 dinI; DNA-damage-inducible protein I 
D      APECO1_3828 recX; regulatory protein for RecA	K03565 recX; regulatory protein 
D      APECO1_3055 yhgA; conserved hypothetical protein	K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-] 
D      APECO1_4259 yfcI; conserved hypothetical protein	K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-] 
D      APECO1_1853 conserved hypothetical protein	K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-] 
D      APECO1_2081 yjiP; conserved hypothetical protein	K24089 rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-] 
D      APECO1_4317 yfaD; conserved hypothetical protein	K24090 rpnE; recombination-promoting nuclease RpnE 
B  Other factors with a suspected DNA repair function
C    DNA polymerase
C    DNA helicases
D      APECO1_2695 rep; DNA helicase and single-stranded DNA-dependent ATPase	K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] 
D      APECO1_67 helD; HelD	K03658 helD; DNA helicase IV [EC:5.6.2.4] 
D      APECO1_1291 dinG; putative ATP-dependent helicase dinG	K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] 
D      APECO1_866 yoaA; Probable ATP-dependent helicase	K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] 
C    Modulation of nucleotide pools
D      APECO1_1887 mutT; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] 
D      APECO1_2821 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23] 
D      APECO1_4326 nrdA; ribonucleotide-diphosphate reductase alpha subunit	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] 
D      APECO1_3846 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] 
D      APECO1_4325 nrdB; ribonucleotide-diphosphate reductase beta subunit	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] 
D      APECO1_3845 nrdF; ribonucleoside-diphosphate reductase 2 beta chain	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] 
C    Others
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#Last updated: March 29, 2024