+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Enterococcus faecium Aus0004

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D EFAU004_00139 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C EFAU004_01991 era; GTP-binding protein Era K03595 era; GTPase C EFAU004_01019 obg; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C EFAU004_01718 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA C EFAU004_00751 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C EFAU004_02457 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D EFAU004_00207 16S rRNA pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D EFAU004_02566 16S rRNA pseudouridylate synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D EFAU004_02268 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D EFAU004_02620 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D EFAU004_00075 16S rRNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D EFAU004_01080 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D EFAU004_02501 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D EFAU004_02860 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D EFAU004_00763 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D EFAU004_00718 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D EFAU004_00756 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D EFAU004_02472 methyltransferase domain protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D EFAU004_02653 trmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D EFAU004_00282 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D EFAU004_01788 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D EFAU004_02285 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D EFAU004_00756 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D EFAU004_01650 23S rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D EFAU004_01217 16S rRNA pseudouridine synthase A K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D EFAU004_00972 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D EFAU004_02475 ribosomal large subunit pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D EFAU004_02554 23S rRNA pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D EFAU004_01593 ermG; rRNA adenine N-6-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] B ribosomal protein modification factors C EFAU004_01739 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C EFAU004_01740 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C EFAU004_01871 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C EFAU004_02502 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C EFAU004_00139 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C EFAU004_02165 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C EFAU004_02654 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C EFAU004_00218 DEAD-box ATP dependent DNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C EFAU004_00984 DEAD-box ATP dependent DNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C EFAU004_01991 era; GTP-binding protein Era K03595 era; GTPase C EFAU004_02617 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C EFAU004_01206 der; ribosome-associated GTPase EngA K03977 engA; GTPase C EFAU004_01019 obg; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C EFAU004_01183 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A C EFAU004_02188 hflX; GTP-binding protein HflX K03665 hflX; GTPase C EFAU004_01313 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C EFAU004_02301 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C EFAU004_02500 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C EFAU004_01714 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C EFAU004_01719 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP C EFAU004_00003 yaaA; S4 domain protein, YaaA K14761 rlbA; ribosome-associated protein C EFAU004_01309 ribosome-associated protein K09710 ybeB; ribosome-associated protein C EFAU004_01993 Putative metalloprotease K07042 ybeY; probable rRNA maturation factor C EFAU004_01312 yhbY; RNA-binding protein YhbY K07574 yhbY; RNA-binding protein C EFAU004_02041 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C EFAU004_02857 engD; translation-associated GTPase K06942 ychF; ribosome-binding ATPase C EFAU004_01289 nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025