+D Transcription factors KO #

  Transcription Factors - Enterococcus faecalis D32

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D EFD32_pB0060 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D EFD32_1718 bacterial regulatory helix-turn-helix protein, AraC family protein K13653 K13653; AraC family transcriptional regulator D EFD32_0215 methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D EFD32_0458 bacterial regulatory helix-turn-helix protein, LysR family protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D EFD32_0734 bacterial regulatory helix-turn-helix protein, LysR family protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D EFD32_0420 lacR; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D EFD32_0537 fructose repressor, GntR family protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D EFD32_0470 DeoR-like helix-turn-helix domain protein K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D EFD32_0838 deoR-like helix-turn-helix domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D EFD32_0122 bacterial regulatory protein, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_0765 bacterial regulatory protein, LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_0883 LacI regulatory family protein, galactose operon repressor GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_1041 bacterial regulatory protein, LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_1475 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_1826 EbgR like sugar transcriptional regulator, LacI-family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_2544 bacterial regulatory protein, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EFD32_1343 sucrose operon repressor, ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D EFD32_1443 bacterial regulatory protein, GntR family protein K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D EFD32_2732 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D EFD32_1131 bacterial regulatory protein, GntR family protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D EFD32_1539 bacterial regulatory protein, GntR family protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D EFD32_0964 bacterial regulatory protein, GntR family protein K03710 K03710; GntR family transcriptional regulator D EFD32_2616 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator C TetR/AcrR family C Lrp/AsnC family C LuxR family C MarR family D EFD32_1403 MarR family protein K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor C MerR family D EFD32_1752 HTH-type transcriptional regulator, GlnR family protein K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor C Fur family D EFD32_1271 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D EFD32_2035 Fe2+/Zn2+ uptake regulation protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D EFD32_1328 ferric uptake regulator family protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D EFD32_0100 cyclic nucleotide-binding domain protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator D EFD32_1601 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator C Rrf2 family C ArsR family D EFD32_0103 bacterial regulatory protein, arsR family protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D EFD32_2040 bacterial regulatory protein, ArsR family protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family C PadR family D EFD32_1098 transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator D EFD32_2045 transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator C Other families D EFD32_0819 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D EFD32_2840 helix-turn-helix domain, rpiR family protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D EFD32_2796 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D EFD32_0055 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D EFD32_2561 sigma-54 interaction domain protein K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator D EFD32_1614 sigma-54 interaction domain protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EFD32_2782 sigma-54 interaction domain protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D EFD32_2205 carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D EFD32_2141 bacterial regulatory helix-turn-helix protein, LysR family protein K02019 modE; molybdate transport system regulatory protein D EFD32_2198 redox-sensing transcriptional repressor Rex family protein K01926 rex; redox-sensing transcriptional repressor D EFD32_2535 coA binding domain protein K01926 rex; redox-sensing transcriptional repressor D EFD32_1380 GTP-sensing transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D EFD32_0246 gp05; cro repressor protein K07729 K07729; putative transcriptional regulator D EFD32_0681 helix-turn-helix family protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D EFD32_0014 transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D EFD32_0210 BglG family transcriptional antiterminator/PRD domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator D EFD32_2167 transcription antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator D EFD32_1256 BglG family transcriptional antiterminator K26932 sacT; sacPA operon transcriptional antiterminator D EFD32_0340 mannitol operon transcriptional antiterminator PRD domain protein K03483 mtlR; mannitol operon transcriptional activator D EFD32_2859 PRD domain protein K03491 licR; probable licABCH operon transcriptional regulator C Others D EFD32_0316 purine catabolism regulatory protein-like family protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D EFD32_2574 purine catabolism regulatory protein-like family protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D EFD32_2849 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EFD32_0095 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D EFD32_0096 arginine repressor ArgR family protein K03402 argR; transcriptional regulator of arginine metabolism D EFD32_0495 arginine repressor family protein K03402 argR; transcriptional regulator of arginine metabolism D EFD32_0798 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D EFD32_1109 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D EFD32_2381 thiaminase-2 like Transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D EFD32_2837 transcriptional regulator ctsR K03708 ctsR; transcriptional regulator of stress and heat shock response D EFD32_1621 central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator D EFD32_1455 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D EFD32_0692 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D EFD32_0802 MraZ family protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2025 #
Classification taken and modified from TRANSFAC 7.0