+D GENES KO
#
KEGG Orthology (KO) - Entomoplasma freundtii
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:efr00010]
D EFREU_v1c05070 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c05910 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D EFREU_v1c00860 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D EFREU_v1c01610 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D EFREU_v1c04300 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D EFREU_v1c04320 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D EFREU_v1c01630 gpm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D EFREU_v1c01840 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D EFREU_v1c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D EFREU_v1c02070 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D EFREU_v1c02060 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D EFREU_v1c02050 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D EFREU_v1c04100 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D EFREU_v1c05030 gapN; glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D EFREU_v1c02310 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D EFREU_v1c00270 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D EFREU_v1c01910 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D EFREU_v1c06280 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D EFREU_v1c03140 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:efr00020]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D EFREU_v1c02070 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D EFREU_v1c02060 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D EFREU_v1c02050 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:efr00030]
D EFREU_v1c05070 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D EFREU_v1c02360 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D EFREU_v1c03260 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D EFREU_v1c06580 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D EFREU_v1c04750 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D EFREU_v1c00440 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D EFREU_v1c05030 gapN; glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D EFREU_v1c00860 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D EFREU_v1c05910 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
D EFREU_v1c02360 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:efr00051]
D EFREU_v1c02120 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c05910 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D EFREU_v1c01810 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D EFREU_v1c05700 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D EFREU_v1c00860 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D EFREU_v1c01610 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D EFREU_v1c06580 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D EFREU_v1c00320 fruB; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D EFREU_v1c05710 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02520 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02500 fruB; PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02880 PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:efr00052]
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c01940 gatY-kbaY; tagatose 1,6-diphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D EFREU_v1c01520 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D EFREU_v1c00230 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D EFREU_v1c01950 agaS; tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism
D EFREU_v1c02770 sgaT; PTS system, ascorbate-specific IIC component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D EFREU_v1c02780 sgaB; PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
C 00500 Starch and sucrose metabolism [PATH:efr00500]
D EFREU_v1c00240 scrA; PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D EFREU_v1c01820 scrA; PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D EFREU_v1c01520 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D EFREU_v1c00230 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D EFREU_v1c02860 celC; PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D EFREU_v1c02950 celA; PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D EFREU_v1c02900 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D EFREU_v1c02910 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D EFREU_v1c02310 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D EFREU_v1c00270 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D EFREU_v1c01910 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D EFREU_v1c03140 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D EFREU_v1c02300 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D EFREU_v1c05070 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:efr00520]
D EFREU_v1c01910 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D EFREU_v1c01980 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D EFREU_v1c02700 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D EFREU_v1c03070 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D EFREU_v1c01600 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D EFREU_v1c02660 murP; PTS system, N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D EFREU_v1c05890 murP; PTS system, N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D EFREU_v1c02670 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D EFREU_v1c06280 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D EFREU_v1c03140 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D EFREU_v1c05070 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D EFREU_v1c02120 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:efr00620]
D EFREU_v1c02070 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D EFREU_v1c02060 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D EFREU_v1c02050 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D EFREU_v1c04100 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D EFREU_v1c02020 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D EFREU_v1c02030 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D EFREU_v1c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:efr00630]
D EFREU_v1c06570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:efr00640]
D EFREU_v1c02020 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D EFREU_v1c02030 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:efr00562]
D EFREU_v1c01890 oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D EFREU_v1c01610 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:efr00190]
D EFREU_v1c06500 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D EFREU_v1c06480 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D EFREU_v1c06490 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D EFREU_v1c06510 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D EFREU_v1c06470 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D EFREU_v1c06540 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D EFREU_v1c06520 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D EFREU_v1c06530 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D EFREU_v1c05560 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:efr00710]
D EFREU_v1c04320 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D EFREU_v1c04300 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D EFREU_v1c00860 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D EFREU_v1c05910 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D EFREU_v1c03260 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D EFREU_v1c06580 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D EFREU_v1c01610 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D EFREU_v1c02360 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:efr00720]
D EFREU_v1c06000 folD; methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D EFREU_v1c02030 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D EFREU_v1c02020 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:efr00680]
D EFREU_v1c06570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D EFREU_v1c01840 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D EFREU_v1c00860 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D EFREU_v1c05910 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c02020 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D EFREU_v1c02030 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D EFREU_v1c01630 gpm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
D EFREU_v1c00520 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D EFREU_v1c00890 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D EFREU_v1c00100 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D EFREU_v1c05870 acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D EFREU_v1c04100 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D EFREU_v1c04640 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D EFREU_v1c05870 acyl carrier protein K02078 acpP; acyl carrier protein
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:efr00561]
D EFREU_v1c00220 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D EFREU_v1c02260 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D EFREU_v1c03230 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D EFREU_v1c04670 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:efr00564]
D EFREU_v1c05500 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D EFREU_v1c00210 glpO; glycerol-3-phospate oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D EFREU_v1c03230 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D EFREU_v1c04670 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D EFREU_v1c01850 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D EFREU_v1c04720 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D EFREU_v1c00650 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D EFREU_v1c00960 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:efr00230]
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D EFREU_v1c00440 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D EFREU_v1c00570 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D EFREU_v1c03500 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D EFREU_v1c04770 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D EFREU_v1c01780 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D EFREU_v1c04630 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D EFREU_v1c03000 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D EFREU_v1c04400 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D EFREU_v1c02990 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D EFREU_v1c00340 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D EFREU_v1c02420 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D EFREU_v1c04870 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D EFREU_v1c03490 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D EFREU_v1c00560 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D EFREU_v1c04350 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D EFREU_v1c02160 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D EFREU_v1c05580 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D EFREU_v1c00520 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:efr00240]
D EFREU_v1c00980 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D EFREU_v1c00800 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D EFREU_v1c00990 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D EFREU_v1c01010 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D EFREU_v1c01000 pyrDII; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D EFREU_v1c01030 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D EFREU_v1c01020 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D EFREU_v1c05230 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D EFREU_v1c00850 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D EFREU_v1c05520 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D EFREU_v1c02840 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D EFREU_v1c06560 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D EFREU_v1c02160 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D EFREU_v1c05440 deoA; thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D EFREU_v1c04870 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D EFREU_v1c04350 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D EFREU_v1c04790 comEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D EFREU_v1c07000 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D EFREU_v1c00900 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D EFREU_v1c04650 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:efr00250]
D EFREU_v1c00560 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D EFREU_v1c00570 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D EFREU_v1c00980 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
C 00260 Glycine, serine and threonine metabolism [PATH:efr00260]
D EFREU_v1c06570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D EFREU_v1c01630 gpm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00270 Cysteine and methionine metabolism [PATH:efr00270]
D EFREU_v1c03180 patB; cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D EFREU_v1c03990 patB; cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D EFREU_v1c02140 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D EFREU_v1c04360 mtn; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D EFREU_v1c02790 dcm; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C 00280 Valine, leucine and isoleucine degradation [PATH:efr00280]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis
D EFREU_v1c05270 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C 00310 Lysine degradation
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:efr00220]
D EFREU_v1c00540 arcB; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D EFREU_v1c00550 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D EFREU_v1c00520 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:efr00330]
D EFREU_v1c04480 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D EFREU_v1c06890 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D EFREU_v1c04100 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:efr00430]
D EFREU_v1c02030 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D EFREU_v1c02020 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:efr00450]
D EFREU_v1c03180 patB; cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D EFREU_v1c03990 patB; cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D EFREU_v1c05100 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D EFREU_v1c06370 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D EFREU_v1c00810 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D EFREU_v1c00460 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D EFREU_v1c06570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism [PATH:efr00480]
D EFREU_v1c03150 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D EFREU_v1c01110 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D EFREU_v1c02710 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
D EFREU_v1c02120 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:efr00730]
D EFREU_v1c04240 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D EFREU_v1c02370 engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D EFREU_v1c02350 thiN; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D EFREU_v1c05580 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:efr00740]
D EFREU_v1c01180 yitU; phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D EFREU_v1c03200 ribC_ribF; riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D EFREU_v1c04490 ribC; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:efr00760]
D EFREU_v1c04170 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D EFREU_v1c04770 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D EFREU_v1c04370 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D EFREU_v1c03840 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D EFREU_v1c04080 cinA; competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D EFREU_v1c05450 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:efr00770]
D EFREU_v1c02010 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D EFREU_v1c05820 coaB; phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D EFREU_v1c05860 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D EFREU_v1c03320 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D EFREU_v1c04640 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:efr00785]
D EFREU_v1c02080 lplA; lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D EFREU_v1c02070 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D EFREU_v1c02060 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D EFREU_v1c02050 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:efr00790]
D EFREU_v1c04660 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D EFREU_v1c06410 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:efr00670]
D EFREU_v1c04660 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D EFREU_v1c06000 folD; methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D EFREU_v1c06570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D EFREU_v1c03720 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D EFREU_v1c04650 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D EFREU_v1c05080 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:efr00860]
D EFREU_v1c06660 cobA; cobalamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D EFREU_v1c03260 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D EFREU_v1c04780 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D EFREU_v1c05870 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D EFREU_v1c02140 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:efr00625]
D EFREU_v1c04100 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:efr00626]
D EFREU_v1c04100 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:efr03020]
D EFREU_v1c06620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D EFREU_v1c06610 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D EFREU_v1c05640 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D EFREU_v1c00840 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:efr03010]
D EFREU_v1c05260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D EFREU_v1c01380 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D EFREU_v1c04210 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D EFREU_v1c01490 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D EFREU_v1c06880 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D EFREU_v1c01050 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D EFREU_v1c01460 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D EFREU_v1c05760 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D EFREU_v1c01310 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D EFREU_v1c05630 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D EFREU_v1c01040 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D EFREU_v1c05620 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D EFREU_v1c01450 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D EFREU_v1c04470 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D EFREU_v1c03960 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D EFREU_v1c01410 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D EFREU_v1c06860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D EFREU_v1c01360 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D EFREU_v1c03360 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D EFREU_v1c03300 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D EFREU_v1c06720 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D EFREU_v1c01350 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D EFREU_v1c01320 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D EFREU_v1c01330 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D EFREU_v1c01440 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D EFREU_v1c01470 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D EFREU_v1c06640 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D EFREU_v1c06850 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D EFREU_v1c06650 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D EFREU_v1c06730 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D EFREU_v1c05750 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D EFREU_v1c01420 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D EFREU_v1c01500 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D EFREU_v1c01390 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D EFREU_v1c05650 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D EFREU_v1c01480 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D EFREU_v1c03930 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D EFREU_v1c02610 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D EFREU_v1c05310 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D EFREU_v1c01370 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D EFREU_v1c01340 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D EFREU_v1c01430 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D EFREU_v1c05290 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D EFREU_v1c02290 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D EFREU_v1c01400 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D EFREU_v1c00870 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D EFREU_v1c04930 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D EFREU_v1c06770 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D EFREU_v1c04700 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D EFREU_v1c07090 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D EFREU_v1c02600 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D EFREU_v1c05610 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D EFREU_v1r030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D EFREU_v1r060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D EFREU_v1r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D EFREU_v1r050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D EFREU_v1r010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D EFREU_v1r040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:efr00970]
D EFREU_v1t040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D EFREU_v1t020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D EFREU_v1t150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D EFREU_v1t240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D EFREU_v1t320 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D EFREU_v1t090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D EFREU_v1t010 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D EFREU_v1t210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D EFREU_v1t310 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D EFREU_v1t180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D EFREU_v1t260 tRNA-His K14226 tRNA-His; tRNA His
D EFREU_v1t250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D EFREU_v1t130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D EFREU_v1t230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D EFREU_v1t270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D EFREU_v1t140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D EFREU_v1t220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D EFREU_v1t280 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D EFREU_v1t050 tRNA-Met K14230 tRNA-Met; tRNA Met
D EFREU_v1t060 tRNA-Met K14230 tRNA-Met; tRNA Met
D EFREU_v1t080 tRNA-Met K14230 tRNA-Met; tRNA Met
D EFREU_v1t100 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D EFREU_v1t030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D EFREU_v1t110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D EFREU_v1t070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D EFREU_v1t120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D EFREU_v1t190 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D EFREU_v1t290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D EFREU_v1t330 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D EFREU_v1t170 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D EFREU_v1t200 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D EFREU_v1t300 tRNA-Val K14237 tRNA-Val; tRNA Val
D EFREU_v1t160 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D EFREU_v1c00730 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D EFREU_v1c06040 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D EFREU_v1c06030 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D EFREU_v1c06050 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D EFREU_v1c01190 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D EFREU_v1c03470 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D EFREU_v1c06140 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D EFREU_v1c03580 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D EFREU_v1c01880 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D EFREU_v1c00180 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D EFREU_v1c00810 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D EFREU_v1c06800 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D EFREU_v1c00460 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D EFREU_v1c03720 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D EFREU_v1c03390 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D EFREU_v1c05840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D EFREU_v1c04830 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D EFREU_v1c06910 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D EFREU_v1c05210 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D EFREU_v1c01700 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D EFREU_v1c03480 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D EFREU_v1c04960 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D EFREU_v1c04950 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D EFREU_v1c04180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D EFREU_v1c05460 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:efr03060]
D EFREU_v1c01510 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D EFREU_v1c06330 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D EFREU_v1c03510 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D EFREU_v1c07070 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D EFREU_v1c06440 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D EFREU_v1c04020 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D EFREU_v1c02180 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D EFREU_v1c04820 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:efr04122]
D EFREU_v1c03750 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D EFREU_v1c04240 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:efr03018]
D EFREU_v1c01840 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D EFREU_v1c06320 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D EFREU_v1c04040 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D EFREU_v1c02450 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D EFREU_v1c05430 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c03780 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:efr03030]
D EFREU_v1c01640 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D EFREU_v1c04250 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D EFREU_v1c04740 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D EFREU_v1c07020 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D EFREU_v1c06990 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D EFREU_v1c03350 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D EFREU_v1c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D EFREU_v1c06840 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D EFREU_v1c03570 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D EFREU_v1c03900 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c06870 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c03910 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D EFREU_v1c04260 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D EFREU_v1c06060 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:efr03410]
D EFREU_v1c06820 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D EFREU_v1c04270 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D EFREU_v1c03190 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D EFREU_v1c04310 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D EFREU_v1c00170 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D EFREU_v1c04260 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D EFREU_v1c06060 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:efr03420]
D EFREU_v1c06420 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D EFREU_v1c06430 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D EFREU_v1c05350 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D EFREU_v1c06110 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D EFREU_v1c04260 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D EFREU_v1c06060 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:efr03430]
D EFREU_v1c06110 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D EFREU_v1c03110 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D EFREU_v1c03100 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D EFREU_v1c03900 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c06870 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c04250 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D EFREU_v1c04740 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D EFREU_v1c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D EFREU_v1c07020 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D EFREU_v1c03350 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D EFREU_v1c06990 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D EFREU_v1c01640 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D EFREU_v1c06060 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:efr03440]
D EFREU_v1c03900 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c06870 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c03590 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D EFREU_v1c07010 recR; recombination protein RecR K06187 recR; recombination protein RecR
D EFREU_v1c04070 recA; recombinase A K03553 recA; recombination protein RecA
D EFREU_v1c04260 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D EFREU_v1c03060 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D EFREU_v1c04250 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D EFREU_v1c04740 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D EFREU_v1c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D EFREU_v1c07020 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D EFREU_v1c03350 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D EFREU_v1c06990 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D EFREU_v1c01640 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:efr02010]
D EFREU_v1c01580 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D EFREU_v1c01570 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D EFREU_v1c01560 potA; spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D EFREU_v1c06250 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D EFREU_v1c06200 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D EFREU_v1c06220 ribose/galactose ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D EFREU_v1c06210 ribose/galactose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D EFREU_v1c06230 ribose/galactose ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D EFREU_v1c02230 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D EFREU_v1c02220 pstA; phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D EFREU_v1c02210 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D EFREU_v1c05370 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D EFREU_v1c05410 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D EFREU_v1c05400 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D EFREU_v1c05390 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D EFREU_v1c05380 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D EFREU_v1c05680 cbiQ; cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D EFREU_v1c05660 cbiO; cobalt ABC transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D EFREU_v1c05670 cbiO; cobalt ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS) [PATH:efr02060]
D EFREU_v1c01900 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D EFREU_v1c06100 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D EFREU_v1c01910 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D EFREU_v1c06280 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D EFREU_v1c01980 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D EFREU_v1c02700 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D EFREU_v1c03140 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D EFREU_v1c00240 scrA; PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D EFREU_v1c01820 scrA; PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D EFREU_v1c02300 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D EFREU_v1c02660 murP; PTS system, N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D EFREU_v1c05890 murP; PTS system, N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D EFREU_v1c02860 celC; PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D EFREU_v1c02950 celA; PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D EFREU_v1c02900 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D EFREU_v1c02910 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D EFREU_v1c02770 sgaT; PTS system, ascorbate-specific IIC component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D EFREU_v1c02780 sgaB; PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D EFREU_v1c05710 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02520 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02500 fruB; PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02880 PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c00320 fruB; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D EFREU_v1c01810 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D EFREU_v1c05700 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:efr03070]
D EFREU_v1c03510 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D EFREU_v1c06330 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D EFREU_v1c01510 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D EFREU_v1c07070 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D EFREU_v1c06440 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D EFREU_v1c02180 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D EFREU_v1c04020 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:efr02020]
D EFREU_v1c02230 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D EFREU_v1c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:efr02024]
D EFREU_v1c05370 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D EFREU_v1c05410 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D EFREU_v1c05400 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D EFREU_v1c05390 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D EFREU_v1c05380 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D EFREU_v1c07070 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D EFREU_v1c03510 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D EFREU_v1c06330 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D EFREU_v1c01510 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D EFREU_v1c06440 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D EFREU_v1c02180 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D EFREU_v1c04020 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D EFREU_v1c03560 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D EFREU_v1c01840 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D EFREU_v1c05370 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D EFREU_v1c05410 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D EFREU_v1c05400 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D EFREU_v1c05390 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D EFREU_v1c05380 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:efr01000]
C 01001 Protein kinases [BR:efr01001]
D EFREU_v1c02380 prkC; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D EFREU_v1c04120 prkC; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:efr01009]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c02390 prpC; phosphorylated protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:efr01002]
D EFREU_v1c04820 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D EFREU_v1c02990 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D EFREU_v1c03630 thiJ; 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis K03152 thiJ; protein deglycase [EC:3.5.1.124]
D EFREU_v1c06090 CAAX amino terminal membrane bound protease K07052 K07052; CAAX protease family protein
D EFREU_v1c01130 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D EFREU_v1c03150 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D EFREU_v1c01110 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D EFREU_v1c05270 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D EFREU_v1c05590 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D EFREU_v1c04710 pepQ; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D EFREU_v1c06960 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D EFREU_v1c04730 rseP; inner membrane zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D EFREU_v1c03670 lonA; class III heat-shock ATP-dependent LonA protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C 01003 Glycosyltransferases [BR:efr01003]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:efr01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:efr01011]
C 01004 Lipid biosynthesis proteins [BR:efr01004]
D EFREU_v1c02260 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D EFREU_v1c03230 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D EFREU_v1c04670 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases
C 01007 Amino acid related enzymes [BR:efr01007]
D EFREU_v1c00730 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D EFREU_v1c04180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D EFREU_v1c05460 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D EFREU_v1c06800 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D EFREU_v1c05210 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D EFREU_v1c00460 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D EFREU_v1c04830 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D EFREU_v1c03390 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D EFREU_v1c05840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D EFREU_v1c06910 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D EFREU_v1c03470 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D EFREU_v1c06140 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D EFREU_v1c03480 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D EFREU_v1c03580 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D EFREU_v1c00180 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D EFREU_v1c01700 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D EFREU_v1c01880 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D EFREU_v1c01190 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D EFREU_v1c04960 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D EFREU_v1c04950 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D EFREU_v1c03180 patB; cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D EFREU_v1c03990 patB; cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:efr00194]
D EFREU_v1c06470 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D EFREU_v1c06480 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D EFREU_v1c06490 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D EFREU_v1c06500 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D EFREU_v1c06510 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D EFREU_v1c06520 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D EFREU_v1c06530 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D EFREU_v1c06540 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:efr03000]
D EFREU_v1c02790 dcm; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EFREU_v1c01830 fruR; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D EFREU_v1c00250 GntR family transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D EFREU_v1c05880 fur; Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D EFREU_v1c02650 RpiR family transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D EFREU_v1c03800 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D EFREU_v1c04920 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:efr03021]
D EFREU_v1c05640 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D EFREU_v1c06620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D EFREU_v1c06610 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D EFREU_v1c00840 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D EFREU_v1c03560 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D EFREU_v1c04550 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D EFREU_v1c03120 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D EFREU_v1c06750 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D EFREU_v1c05340 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:efr03019]
D EFREU_v1c02250 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D EFREU_v1c02450 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D EFREU_v1c05430 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D EFREU_v1c04040 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D EFREU_v1c06320 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D EFREU_v1c02000 cbf; 3'-5' exoribonuclease K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D EFREU_v1c03530 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D EFREU_v1c01840 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D EFREU_v1c01860 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D EFREU_v1c03780 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
C 03041 Spliceosome
C 03011 Ribosome [BR:efr03011]
D EFREU_v1c05260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D EFREU_v1c01380 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D EFREU_v1c04210 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D EFREU_v1c01490 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D EFREU_v1c06880 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D EFREU_v1c01050 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D EFREU_v1c01460 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D EFREU_v1c05760 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D EFREU_v1c01310 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D EFREU_v1c05630 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D EFREU_v1c01040 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D EFREU_v1c05620 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D EFREU_v1c01450 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D EFREU_v1c04470 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D EFREU_v1c03960 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D EFREU_v1c01410 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D EFREU_v1c06860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D EFREU_v1c01360 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D EFREU_v1c03360 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D EFREU_v1c03300 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D EFREU_v1c06720 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D EFREU_v1c01350 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D EFREU_v1c01320 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D EFREU_v1c01330 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D EFREU_v1c01440 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D EFREU_v1c01470 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D EFREU_v1c06850 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D EFREU_v1c06650 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D EFREU_v1c06730 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D EFREU_v1c06640 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D EFREU_v1c05750 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D EFREU_v1c01420 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D EFREU_v1c01500 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D EFREU_v1c01390 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D EFREU_v1c05650 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D EFREU_v1c01480 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D EFREU_v1c03930 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D EFREU_v1c02610 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D EFREU_v1c05310 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D EFREU_v1c01370 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D EFREU_v1c01340 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D EFREU_v1c01430 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D EFREU_v1c05290 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D EFREU_v1c02290 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D EFREU_v1c01400 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D EFREU_v1c00870 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D EFREU_v1c04930 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D EFREU_v1c06770 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D EFREU_v1c04700 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D EFREU_v1c07090 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D EFREU_v1c02600 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D EFREU_v1c05610 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D EFREU_v1r010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D EFREU_v1r040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D EFREU_v1r030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D EFREU_v1r060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D EFREU_v1r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D EFREU_v1r050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:efr03009]
D EFREU_v1c02250 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D EFREU_v1c03600 era; GTP-binding protein Era K03595 era; GTPase
D EFREU_v1c03850 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D EFREU_v1c04550 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D EFREU_v1c03120 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D EFREU_v1c06750 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D EFREU_v1c00040 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D EFREU_v1c02410 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D EFREU_v1c02430 rsmD; 16S rRNA (guanine966-N2)-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D EFREU_v1c00660 rsmG; 16S rRNA (guanine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D EFREU_v1c04910 rsmH; 16S rRNA (cytosine1402-N4)-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D EFREU_v1c05330 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D EFREU_v1c06790 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D EFREU_v1c04010 rlmH; rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D EFREU_v1c05170 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D EFREU_v1c06080 rluC; 23S rRNA pseudouridine955/2504/2580 synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D EFREU_v1c04810 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D EFREU_v1c03950 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D EFREU_v1c01790 ruvX; Holliday junction DNA helicase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D EFREU_v1c03530 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D EFREU_v1c02370 engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D EFREU_v1c05510 engA; GTP-binding protein EngA K03977 engA; GTPase
D EFREU_v1c03920 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
D EFREU_v1c03270 yqeH; GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
D EFREU_v1c00930 sua5; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D EFREU_v1c03490 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D EFREU_v1c04510 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D EFREU_v1c04560 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D EFREU_v1c03610 ybeY; 16S rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D EFREU_v1c00670 engD; GTP-dependent nucleic acid-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:efr03016]
D EFREU_v1c01700 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D EFREU_v1c04830 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D EFREU_v1c05840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D EFREU_v1c00460 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D EFREU_v1c05210 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D EFREU_v1c06910 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D EFREU_v1c03470 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D EFREU_v1c01190 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D EFREU_v1c06140 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D EFREU_v1c03580 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D EFREU_v1c01880 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D EFREU_v1c00180 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D EFREU_v1c06800 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D EFREU_v1c03390 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D EFREU_v1c03480 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D EFREU_v1c04960 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D EFREU_v1c04950 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D EFREU_v1c04180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D EFREU_v1c05460 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D EFREU_v1c05130 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D EFREU_v1c06260 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D EFREU_v1c05690 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D EFREU_v1c04500 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D EFREU_v1c00930 sua5; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D EFREU_v1c00190 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D EFREU_v1c00490 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D EFREU_v1c07080 rnpA; ribonuclease P (protein C5) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D EFREU_v1c00730 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D EFREU_v1c07030 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D EFREU_v1c06920 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D EFREU_v1c03940 trmD; tRNA (guanosine(37)-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D EFREU_v1c03550 trmK; tRNA (adenine22-N1)-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D EFREU_v1c04390 cspR; RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D EFREU_v1c05040 spoU; RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D EFREU_v1c03750 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D EFREU_v1c04240 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D EFREU_v1c06970 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D EFREU_v1c01670 tsaB; tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D EFREU_v1c06170 tsaD; tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D EFREU_v1c01660 tsaE; tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D EFREU_v1c06320 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:efr03012]
D EFREU_v1c04520 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D EFREU_v1c02590 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D EFREU_v1c05250 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D EFREU_v1c01070 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D EFREU_v1c01060 fusA; elongation factor G K02355 fusA; elongation factor G
D EFREU_v1c00910 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D EFREU_v1c05220 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D EFREU_v1c00920 prmC; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D EFREU_v1c00450 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D EFREU_v1c05600 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D EFREU_v1c03700 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:efr03110]
D EFREU_v1c03810 clpB; ATP-dependent Clp protease, ATPase subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D EFREU_v1c03780 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D EFREU_v1c03770 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D EFREU_v1c06950 hslO; heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D EFREU_v1c03790 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D EFREU_v1c06960 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D EFREU_v1c06540 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D EFREU_v1c01540 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:efr04131]
D EFREU_v1c04300 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D EFREU_v1c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:efr03032]
D EFREU_v1c02790 dcm; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EFREU_v1c05490 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D EFREU_v1c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D EFREU_v1c06840 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D EFREU_v1c03570 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D EFREU_v1c04280 dnaB; chromosome replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D EFREU_v1c04290 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D EFREU_v1c03900 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c06870 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c04250 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D EFREU_v1c04740 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D EFREU_v1c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D EFREU_v1c03350 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D EFREU_v1c06990 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D EFREU_v1c01640 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D EFREU_v1c07020 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D EFREU_v1c03910 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D EFREU_v1c04260 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D EFREU_v1c06060 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D EFREU_v1c00080 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D EFREU_v1c00060 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D EFREU_v1c02970 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D EFREU_v1c02960 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D EFREU_v1c00710 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:efr03036]
D EFREU_v1c02790 dcm; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EFREU_v1c02250 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D EFREU_v1c05490 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D EFREU_v1c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D EFREU_v1c02240 smc; chromosome condensation and segregation SMC ATPase K03529 smc; chromosome segregation protein
D EFREU_v1c05190 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D EFREU_v1c05180 scpB; chromosome condensation and segregation factor B K06024 scpB; segregation and condensation protein B
D EFREU_v1c05360 ftsK; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D EFREU_v1c04890 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D EFREU_v1c04880 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D EFREU_v1c02970 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D EFREU_v1c02960 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D EFREU_v1c00490 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D EFREU_v1c00660 rsmG; 16S rRNA (guanine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D EFREU_v1c03420 engB; GTP-binding protein K03978 engB; GTP-binding protein
D EFREU_v1c06350 DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:efr03400]
D EFREU_v1c06180 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D EFREU_v1c06820 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D EFREU_v1c04270 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D EFREU_v1c03190 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D EFREU_v1c04310 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D EFREU_v1c00170 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D EFREU_v1c06060 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D EFREU_v1c04260 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D EFREU_v1c06420 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D EFREU_v1c06430 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D EFREU_v1c05350 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D EFREU_v1c06110 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D EFREU_v1c06620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D EFREU_v1c06610 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D EFREU_v1c05640 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D EFREU_v1c00840 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D EFREU_v1c03110 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D EFREU_v1c03100 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D EFREU_v1c04250 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D EFREU_v1c04740 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D EFREU_v1c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D EFREU_v1c03350 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D EFREU_v1c06990 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D EFREU_v1c01640 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D EFREU_v1c07020 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D EFREU_v1c03900 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c06870 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c03060 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D EFREU_v1c04070 recA; recombinase A K03553 recA; recombination protein RecA
D EFREU_v1c03590 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D EFREU_v1c07010 recR; recombination protein RecR K06187 recR; recombination protein RecR
D EFREU_v1c05480 recU; Holliday junction-specific endonuclease K03700 recU; recombination protein U
D EFREU_v1c00080 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D EFREU_v1c00060 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D EFREU_v1c00710 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D EFREU_v1c05490 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D EFREU_v1c03090 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D EFREU_v1c04870 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D EFREU_v1c00890 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D EFREU_v1c00100 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:efr03029]
D EFREU_v1c04520 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D EFREU_v1c02590 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D EFREU_v1c05250 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D EFREU_v1c01070 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D EFREU_v1c01060 fusA; elongation factor G K02355 fusA; elongation factor G
D EFREU_v1c03600 era; GTP-binding protein Era K03595 era; GTPase
D EFREU_v1c04180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D EFREU_v1c05840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D EFREU_v1c03470 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D EFREU_v1c03580 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D EFREU_v1c05210 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D EFREU_v1c06040 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D EFREU_v1c06030 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D EFREU_v1c06050 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D EFREU_v1c03900 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c06870 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D EFREU_v1c03780 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D EFREU_v1c03790 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D EFREU_v1c03770 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D EFREU_v1c07070 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:efr02000]
D EFREU_v1c05140 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D EFREU_v1c02480 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D EFREU_v1c03870 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D EFREU_v1c03880 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D EFREU_v1c01150 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D EFREU_v1c01580 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D EFREU_v1c01570 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D EFREU_v1c01560 potA; spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D EFREU_v1c06250 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D EFREU_v1c06200 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D EFREU_v1c06220 ribose/galactose ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D EFREU_v1c06210 ribose/galactose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D EFREU_v1c06230 ribose/galactose ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D EFREU_v1c02230 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D EFREU_v1c02220 pstA; phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D EFREU_v1c02210 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D EFREU_v1c05370 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D EFREU_v1c05410 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D EFREU_v1c05400 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D EFREU_v1c05390 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D EFREU_v1c05380 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D EFREU_v1c04860 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D EFREU_v1c05680 cbiQ; cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D EFREU_v1c05660 cbiO; cobalt ABC transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D EFREU_v1c05670 cbiO; cobalt ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D EFREU_v1c01160 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D EFREU_v1c00110 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D EFREU_v1c00130 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D EFREU_v1c01170 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D EFREU_v1c00120 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D EFREU_v1c04580 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D EFREU_v1c01760 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D EFREU_v1c04970 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D EFREU_v1c05800 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D EFREU_v1c06940 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D EFREU_v1c01900 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D EFREU_v1c06100 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D EFREU_v1c01910 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D EFREU_v1c06280 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D EFREU_v1c01980 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D EFREU_v1c02700 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D EFREU_v1c03140 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D EFREU_v1c00240 scrA; PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D EFREU_v1c01820 scrA; PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D EFREU_v1c02300 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D EFREU_v1c02660 murP; PTS system, N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D EFREU_v1c05890 murP; PTS system, N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D EFREU_v1c00320 fruB; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D EFREU_v1c05710 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02520 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02500 fruB; PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02880 PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D EFREU_v1c02860 celC; PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D EFREU_v1c02950 celA; PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D EFREU_v1c02900 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D EFREU_v1c02910 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D EFREU_v1c02770 sgaT; PTS system, ascorbate-specific IIC component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D EFREU_v1c02780 sgaB; PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D EFREU_v1c00200 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D EFREU_v1c02110 focA; formate/nitrite transporter K06212 focA; formate transporter
D EFREU_v1c06270 mgtE; Mg2+ transport protein K06213 mgtE; magnesium transporter
D EFREU_v1c00690 pyrP; uracil permease K02824 uraA; uracil permease
D EFREU_v1c03760 pbuG; xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D EFREU_v1c03370 malate permease K24180 mleP; malate permease and related proteins
D EFREU_v1c06450 malate permease K24180 mleP; malate permease and related proteins
D EFREU_v1c00590 malate permease K24180 mleP; malate permease and related proteins
D EFREU_v1c05550 hypothetical protein K23675 fmnP; riboflavin transporter
C 02044 Secretion system [BR:efr02044]
D EFREU_v1c04790 comEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D EFREU_v1c03380 comEC; competence protein ComEC K02238 comEC; competence protein ComEC
D EFREU_v1c06440 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D EFREU_v1c03510 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D EFREU_v1c06330 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D EFREU_v1c01510 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D EFREU_v1c04020 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D EFREU_v1c02180 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D EFREU_v1c07070 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:efr04812]
D EFREU_v1c04890 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
C 04147 Exosome [BR:efr04147]
D EFREU_v1c01840 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D EFREU_v1c04300 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D EFREU_v1c04320 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D EFREU_v1c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D EFREU_v1c03780 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D EFREU_v1c05070 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D EFREU_v1c03000 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D EFREU_v1c01070 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D EFREU_v1c05130 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D EFREU_v1c05580 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D EFREU_v1c03500 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D EFREU_v1c02710 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D EFREU_v1c00220 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D EFREU_v1c02040 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D EFREU_v1c01610 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:efr02048]
D EFREU_v1c02790 dcm; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EFREU_v1c04890 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D EFREU_v1c02970 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D EFREU_v1c02960 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:efr03100]
D EFREU_v1t040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D EFREU_v1t020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D EFREU_v1t150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D EFREU_v1t240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D EFREU_v1t320 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D EFREU_v1t090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D EFREU_v1t010 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D EFREU_v1t210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D EFREU_v1t310 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D EFREU_v1t180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D EFREU_v1t260 tRNA-His K14226 tRNA-His; tRNA His
D EFREU_v1t250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D EFREU_v1t130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D EFREU_v1t230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D EFREU_v1t270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D EFREU_v1t140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D EFREU_v1t220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D EFREU_v1t280 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D EFREU_v1t050 tRNA-Met K14230 tRNA-Met; tRNA Met
D EFREU_v1t060 tRNA-Met K14230 tRNA-Met; tRNA Met
D EFREU_v1t080 tRNA-Met K14230 tRNA-Met; tRNA Met
D EFREU_v1t100 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D EFREU_v1t030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D EFREU_v1t110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D EFREU_v1t070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D EFREU_v1t120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D EFREU_v1t190 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D EFREU_v1t290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D EFREU_v1t330 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D EFREU_v1t170 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D EFREU_v1t200 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D EFREU_v1t300 tRNA-Val K14237 tRNA-Val; tRNA Val
D EFREU_v1t160 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D EFREU_v1r030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D EFREU_v1r060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D EFREU_v1r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D EFREU_v1r050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D EFREU_v1r010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D EFREU_v1r040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D EFREU_v1c02460 ldhA; lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D EFREU_v1c00580 ldhA; lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D EFREU_v1c03020 acpD; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D EFREU_v1c05720 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D EFREU_v1c00410 msrA; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D EFREU_v1c05950 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D EFREU_v1c05930 mapA; maltose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D EFREU_v1c06360 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D EFREU_v1c06380 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D EFREU_v1c02270 yloV; dihydroxyacetone/glyceraldehyde kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D EFREU_v1c06390 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D EFREU_v1c00370 tatD; Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D EFREU_v1c00380 tatD; Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D EFREU_v1c00030 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D EFREU_v1c02870 glycosyl hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D EFREU_v1c00310 glycosyl hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D EFREU_v1c02440 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D EFREU_v1c02550 tdcF; TdcF protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D EFREU_v1c04130 sph; oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D EFREU_v1c04330 sph; oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D EFREU_v1c03410 ctp; cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D EFREU_v1c00620 ctp; cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D EFREU_v1c00600 mgtA; Mg(2+) transport ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D EFREU_v1c05090 sufU; FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D EFREU_v1c04150 degV; fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D EFREU_v1c05060 hypothetical protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D EFREU_v1c03680 tig; trigger factor K03545 tig; trigger factor
D EFREU_v1c06310 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D EFREU_v1c01710 rnhA; ribonuclease H K06993 K06993; ribonuclease H-related protein
D EFREU_v1c06600 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D EFREU_v1c03890 smf; DNA processing/uptake protein K04096 smf; DNA processing protein
D EFREU_v1c03660 recombination factor protein RarA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D EFREU_v1c06590 sulfurtransferase K03972 pspE; phage shock protein E
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D EFREU_v1c00640 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D EFREU_v1c01750 typA; GTP-binding protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
D EFREU_v1c02200 phoU; phosphate transport system regulator PhoU K02039 phoU; phosphate transport system protein
D EFREU_v1c02130 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D EFREU_v1c04160 hypothetical protein K06878 K06878; tRNA-binding protein
D EFREU_v1c02570 LemA family protein K03744 lemA; LemA protein
D EFREU_v1c03210 hypothetical protein K01421 yhgE; putative membrane protein
C 99997 Function unknown
D EFREU_v1c00830 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein
D EFREU_v1c06740 hydrolase K06889 K06889; uncharacterized protein
D EFREU_v1c04840 hydrolase K06889 K06889; uncharacterized protein
D EFREU_v1c06150 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D EFREU_v1c00510 proton/glutamate symporter K06956 K06956; uncharacterized protein
D EFREU_v1c02680 hypothetical protein K07090 K07090; uncharacterized protein
D EFREU_v1c05900 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D EFREU_v1c02740 ATP-binding protein K09384 K09384; uncharacterized protein
D EFREU_v1c02170 DNA-binding protein K09787 K09787; uncharacterized protein
D EFREU_v1c03130 hypothetical protein K09963 K09963; uncharacterized protein
D EFREU_v1c03250 hypothetical protein K09976 K09976; uncharacterized protein
D EFREU_v1c05300 hypothetical protein K07584 ysxB; uncharacterized protein
D EFREU_v1c04540 RNA-binding protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024