+F Repair protein KO
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DNA Repair and Recombination Proteins - Elaeis guineensis (African oil palm)
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 105060733 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 105055970 DExH-box ATP-dependent RNA helicase DExH14 isoform X1 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 105042716 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 105058927 uracil-DNA glycosylase, mitochondrial-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 105055388 uracil-DNA glycosylase, mitochondrial-like isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 105053127 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 105051527 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 105035777 methyl-CpG-binding domain protein 4-like protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 105037057 uncharacterized protein LOC105037057 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 105051819 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 105039152 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 105051450 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 105055065 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 105051804 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 105053504 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 105040593 uncharacterized protein LOC105040593 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 105042222 uncharacterized protein LOC105042222 K03505 POLD4; DNA polymerase delta subunit 4
F 105059462 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
F 105053523 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 105035197 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 105041903 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 105033758 DNA polymerase epsilon subunit 3 isoform X1 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 105049709 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 105046296 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105050563 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 105054821 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105040125 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 105059737 flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 105057784 LOW QUALITY PROTEIN: DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105060442 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 105047883 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 105052040 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 105057122 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 105047531 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 105039164 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 105053578 LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 1-like K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 105043061 poly [ADP-ribose] polymerase 1-like isoform X1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 105033868 LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 105052529 poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 105053183 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 105034882 UV excision repair protein RAD23 homolog A K10839 RAD23; UV excision repair protein RAD23
F 105034003 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 105041073 ubiquitin receptor RAD23c K10839 RAD23; UV excision repair protein RAD23
F 105050755 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 105048512 ubiquitin receptor RAD23d isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 105058733 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105056281 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105059632 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 105046728 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 105033280 DNA damage-binding protein 1a-like K10610 DDB1; DNA damage-binding protein 1
F 105059787 DNA damage-binding protein 1a K10610 DDB1; DNA damage-binding protein 1
F 105046232 DNA damage-binding protein 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 105041840 uncharacterized protein LOC105041840 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 105058631 uncharacterized protein LOC105058631 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 105051048 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 105059668 DNA-directed RNA polymerase II subunit 1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 105055141 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 105044174 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 105060985 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 105058909 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 105060763 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 105045456 DNA-directed RNA polymerases II and IV subunit 5A isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105045524 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105045542 DNA-directed RNA polymerase V subunit 5A isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105050256 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105051377 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105043406 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 105059413 DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 105059347 DNA-directed RNA polymerase II subunit RPB7 isoform X2 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 105054705 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 105060651 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 105045041 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 105052594 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 105056699 DNA-directed RNA polymerases II, IV and V subunit 9A-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 105054337 DNA-directed RNA polymerases II, IV and V subunit 9A-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 109506288 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 105053143 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 105042794 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 105058733 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105056281 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105059632 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 105046728 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 105033280 DNA damage-binding protein 1a-like K10610 DDB1; DNA damage-binding protein 1
F 105059787 DNA damage-binding protein 1a K10610 DDB1; DNA damage-binding protein 1
F 105035290 DNA excision repair protein ERCC-8 isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 105051054 DNA excision repair protein CSB isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6
F 105040903 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 105048089 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 105041229 transcription elongation factor 1 homolog isoform X1 K25829 ELOF1; transcription elongation factor 1
F 105047470 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 105035215 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 105054955 DNA repair helicase XPB1 isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 105039800 DNA repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 105039254 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 105050366 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 105053666 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 105043197 general transcription factor IIH subunit 2-like isoform X1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 105041337 RNA polymerase II transcription factor B subunit 4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 105059003 RNA polymerase II transcription factor B subunit 2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 105060439 cyclin-dependent kinase D-1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 105042470 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
E 105033574 uncharacterized protein LOC105033574 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 105041348 uncharacterized protein LOC105041348 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 109505580 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 105044402 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 105056091 replication protein A 70 kDa DNA-binding subunit B-like isoform X1 K07466 RFA1; replication factor A1
E 105035014 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 105050800 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 105055410 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 105039914 replication protein A 14 kDa subunit isoform X1 K10740 RPA3; replication factor A3
E 105052578 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Other NER factors
E 105043469 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 105043789 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 105060440 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E 105057784 LOW QUALITY PROTEIN: DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105060442 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105040454 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 105058331 cullin-3A-like isoform X1 K03869 CUL3; cullin 3
E 105056562 cullin-3A-like isoform X2 K03869 CUL3; cullin 3
E 105032609 transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E 105046342 transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E 105032010 uncharacterized protein LOC105032010 isoform X1 K03873 ELOB; elongin-B
E 105049859 uncharacterized protein LOC105049859 isoform X3 K03873 ELOB; elongin-B
E 105058328 uncharacterized protein LOC105058328 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 105041044 DNA mismatch repair protein MSH2 isoform X1 K08735 MSH2; DNA mismatch repair protein MSH2
E 105054823 LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 105040286 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 105053216 LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 105038513 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 105039840 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 105055235 DNA mismatch repair protein MLH3-like K08739 MLH3; DNA mismatch repair protein MLH3
E 105055238 LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3-like K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 105051804 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 105053504 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 105040593 uncharacterized protein LOC105040593 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 105042222 uncharacterized protein LOC105042222 K03505 POLD4; DNA polymerase delta subunit 4
E 105059462 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E 105053523 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 109505580 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 105044402 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 105056091 replication protein A 70 kDa DNA-binding subunit B-like isoform X1 K07466 RFA1; replication factor A1
E 105035014 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 105050800 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 105055410 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 105039914 replication protein A 14 kDa subunit isoform X1 K10740 RPA3; replication factor A3
E 105052578 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 105042420 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 105037415 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E 105051821 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 105037514 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 109504734 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 105053122 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 105036598 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 105046296 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105050563 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 105054821 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105041179 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 105053866 exonuclease 1 isoform X3 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 105057784 LOW QUALITY PROTEIN: DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105060442 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105052942 WD repeat-containing protein 76 isoform X1 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 105033323 double-strand break repair protein MRE11-like isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 105052694 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 105049145 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 105042781 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 105058864 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X3 K10683 BARD1; BRCA1-associated RING domain protein 1
E 105044204 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 105046724 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 105047998 uncharacterized protein LOC105047998 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 105059615 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E 105044524 lys-63-specific deubiquitinase BRCC36 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 105055234 Fanconi anemia group J protein homolog isoform X3 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 105045060 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 105051794 LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-A K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 105033323 double-strand break repair protein MRE11-like isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 105052694 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 105049145 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 105042781 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 105057159 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 105056665 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105058584 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 105056665 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105058584 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105044668 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 105059023 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 105045740 DNA repair protein RAD51 homolog 4 isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 105037939 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 105039627 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 105036234 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 105035408 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 105042242 protein CHROMATIN REMODELING 35-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105057160 SNF2 domain-containing protein CLASSY 2-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105060877 LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105043888 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105053240 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 105060817 mediator of RNA polymerase II transcription subunit 34 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 105032154 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 105051907 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105042050 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105038715 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 105051907 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105042050 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105034089 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105048885 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105051117 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 105053856 uncharacterized protein LOC105053856 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 109505580 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 105044402 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 105056091 replication protein A 70 kDa DNA-binding subunit B-like isoform X1 K07466 RFA1; replication factor A1
E 105035014 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 105050800 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 105055410 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 105039914 replication protein A 14 kDa subunit isoform X1 K10740 RPA3; replication factor A3
E 105052578 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 105039499 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 105050520 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 105042241 serine/threonine-protein phosphatase 4 regulatory subunit 2-B isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 105039929 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 105052597 serine/threonine-protein phosphatase 4 regulatory subunit 3B-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 105055407 LOW QUALITY PROTEIN: uncharacterized protein LOC105055407 K19022 AP5B1; AP-5 complex subunit beta-1
E 105052711 AP-5 complex subunit mu isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
E 105034796 AP-5 complex subunit zeta-1 isoform X2 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 105045561 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 105043644 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 105046134 uncharacterized protein LOC105046134 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 105043398 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 105050203 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 105061232 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 105050480 LOW QUALITY PROTEIN: non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 105052818 crossover junction endonuclease EME1B K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 105045367 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 105057914 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 105057651 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1
E 105045952 structure-specific endonuclease subunit SLX1 homolog 2 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 105045575 structure-specific endonuclease subunit SLX1 homolog K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 105059017 LOW QUALITY PROTEIN: flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 105054587 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 105047910 uncharacterized protein LOC105047910 isoform X1 K19026 SPG11; spatacsin
E 105047733 LOW QUALITY PROTEIN: uncharacterized protein LOC105047733 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 105050172 protein MRG1 K11339 MORF4L1; mortality factor 4-like protein 1
E 105061003 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 105056301 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 105051166 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 105056148 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 105043148 Werner Syndrome-like exonuclease isoform X1 K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 105039603 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 105040360 single-stranded DNA-binding protein WHY1, chloroplastic isoform X1 K26559 WHY1; single-stranded DNA-binding protein WHY1
E 105049764 single-stranded DNA-bindig protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
E 105038531 single-stranded DNA-bindig protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 105046549 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 105054786 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 105033323 double-strand break repair protein MRE11-like isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 105052694 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 105049145 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 105039319 DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 105053440 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 105039164 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 105057122 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 105050978 tyrosyl-DNA phosphodiesterase 2 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 105060094 tyrosyl-DNA phosphodiesterase 2 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 105060143 uncharacterized protein LOC105060143 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 105050993 uncharacterized protein LOC105050993 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 105040910 uncharacterized protein LOC105040910 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 105058180 E3 ubiquitin-protein ligase FANCL isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 105051846 uncharacterized protein LOC105051846 isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 105051092 centromere protein S isoform X1 K11511 APITD1; centromere protein S
E 105061584 centromere protein X K15360 STRA13; centromere protein X
E 105047102 probable ubiquitin-conjugating enzyme E2 37 isoform X1 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 105051907 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105042050 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105034089 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105048885 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105051117 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 105053856 uncharacterized protein LOC105053856 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 105060277 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 105045158 Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 105057159 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 105055234 Fanconi anemia group J protein homolog isoform X3 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 105051220 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 105056665 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105058584 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105059023 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 105038727 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 105032370 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
E 105035370 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 105055470 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 105058981 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 105045744 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 105049096 serine/threonine-protein phosphatase 6 regulatory subunit 3-like K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 105059799 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 105034837 telomerase Cajal body protein 1 isoform X1 K23314 WRAP53; telomerase Cajal body protein 1
E 105043188 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 105053662 WD repeat-containing protein 70-like K24752 WDR70; WD repeat-containing protein 70
E 105052942 WD repeat-containing protein 76 isoform X1 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 105035291 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 105032776 DNA polymerase kappa isoform X1 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 105053298 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 105045240 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 105040310 ubiquitin-conjugating enzyme E2 2 isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105044960 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105053254 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105051334 ubiquitin-conjugating enzyme E2 2 isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105047918 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105055896 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105038192 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 105043103 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 105035256 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 105033958 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105037858 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105038291 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105041098 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105048496 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105054259 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105054664 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105052088 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105043931 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 105047395 ubiquitin-conjugating enzyme E2 36 isoform X1 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 105046296 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 105050563 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 105054821 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 105057491 cell cycle checkpoint control protein RAD9A isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 105042828 uncharacterized protein LOC105042828 isoform X1 K10903 HUS1; HUS1 checkpoint protein
D 105059370 uncharacterized protein LOC105059370 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 105053759 cell cycle checkpoint protein RAD17 isoform X3 K06662 HRAD17; cell cycle checkpoint protein
D 105037415 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 105051821 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 105037514 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 109504734 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 105053122 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 105036598 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 105059370 uncharacterized protein LOC105059370 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 105041822 protein timeless homolog isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 105055374 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 105038727 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 105053825 uncharacterized protein LOC105053825 isoform X2 K20403 TTI1; TELO2-interacting protein 1
D 105039656 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 105057157 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 105059675 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 105056273 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 105048516 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 105035059 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 105035799 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105035815 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105035816 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105037590 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105037838 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105036248 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105040620 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105041071 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 105041440 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105041928 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 105041602 14-3-3 protein 7 isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105056773 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 105053212 14-3-3-like protein isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105043958 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105047394 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 105046648 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 105041596 14-3-3-like protein GF14 omega K06630 YWHAE; 14-3-3 protein epsilon
D 105048134 14-3-3 protein 9 K06630 YWHAE; 14-3-3 protein epsilon
D 105060579 14-3-3-like protein GF14 kappa isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105058447 14-3-3 protein 6 K06630 YWHAE; 14-3-3 protein epsilon
D 105058486 14-3-3-like protein GF14 lambda K06630 YWHAE; 14-3-3 protein epsilon
D 105041595 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 105058695 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 105039817 mediator of DNA damage checkpoint protein 1 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 105046594 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105057452 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105038922 serine/threonine-protein kinase Nek6 isoform X2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105060423 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105034640 protein downstream neighbor of Son isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 105041283 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 105048751 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 105039199 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 105057577 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 105040799 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 105041174 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 105043322 DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 105037645 uncharacterized protein LOC105037645 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 105042070 uncharacterized protein LOC105042070 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 105051004 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 105053712 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 105057061 exonuclease V, chloroplastic isoform X2 K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 105050430 endonuclease V isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 105055998 DNA annealing helicase and endonuclease ZRANB3 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 105041227 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 105041224 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 105045414 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 109505844 LOW QUALITY PROTEIN: uncharacterized protein LOC109505844 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 105041223 endonuclease 4 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 105041226 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 105050614 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 105054436 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 105044183 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 105039969 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 105039972 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 105061343 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 105045188 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 105055060 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 105055866 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 105038036 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 105048410 ribonucleoside-diphosphate reductase large subunit-like isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 105041246 ribonucleoside-diphosphate reductase large subunit isoform X2 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 105032431 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 105042120 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 105042716 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 105058927 uracil-DNA glycosylase, mitochondrial-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 105055388 uracil-DNA glycosylase, mitochondrial-like isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 105048339 DNA-3-methyladenine glycosylase 1-like K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 105047171 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 105053127 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 105051527 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 105034696 uncharacterized protein LOC105034696 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105060180 uncharacterized protein LOC105060180 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105060960 uncharacterized protein LOC105060960 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105050470 uncharacterized protein LOC105050470 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105061078 uncharacterized protein LOC105061078 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105034716 uncharacterized protein LOC105034716 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105050126 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 105039152 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 105051450 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 105031940 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 105033029 DNA polymerase I A, chloroplastic isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 105033029 DNA polymerase I A, chloroplastic isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 12079461 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 12079459 rpoC2; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 12079460 rpoC1; RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 12079509 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 105054914 uncharacterized protein LOC105054914 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 105047680 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
E 105047096 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 105032022 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 105035722 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 105032022 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 105035722 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 105040500 uncharacterized protein LOC105040500 K04485 radA; DNA repair protein RadA/Sms
E 105056344 ATP-dependent DNA helicase homolog RECG, chloroplastic K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 105046114 probable DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 105053232 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 105045099 uncharacterized protein LOC105045099 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 105032022 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D 105035722 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 105047680 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
D 105047096 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 105055060 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 105055866 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024