+F Repair protein KO
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DNA Repair and Recombination Proteins - Eutypa lata
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D UCREL1_5984 putative ring-2 protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UCREL1_1319 putative deoxyribodipyrimidine photo-lyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E UCREL1_3974 putative uracil-dna glycosylase protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E UCREL1_6459 putative g u mismatch-specific uracil dna glycosylase protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E UCREL1_5901 putative a g-specific adenine glycosylase protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E UCREL1_7980 putative n-glycosylase dna lyase protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E UCREL1_9365 putative dna repair protein ntg1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E UCREL1_7989 putative dna-(apurinic or apyrimidinic site) lyase 1 protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F UCREL1_220 putative dna polymerase delta catalytic subunit protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F UCREL1_370 putative dna polymerase delta small subunit protein K02328 POLD2; DNA polymerase delta subunit 2
F UCREL1_4138 putative dna polymerase subunit cdc27 protein K03504 POLD3; DNA polymerase delta subunit 3
F UCREL1_5998 putative dna polymerase delta protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F UCREL1_3210 putative dna polymerase epsilon protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F UCREL1_7576 putative dna polymerase epsilon subunit b protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E UCREL1_1256 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen
E UCREL1_5188 putative dna-repair protein rad2 protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E UCREL1_546 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E UCREL1_10181 putative phospholipase d nuclease protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E UCREL1_3659 putative tyrosyl-dna phosphodiesterase protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E UCREL1_4929 putative aprataxin-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E UCREL1_568 putative poly polymerase 2 adp-ribosyltransferase 2 protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F UCREL1_11433 putative rad4 family protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F UCREL1_10030 putative dna repair protein rhp41 protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F UCREL1_10280 putative uv excision repair protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F UCREL1_3121 putative ring-box protein 1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F UCREL1_10848 putative ubiquitin ligase subunit protein K10609 CUL4; cullin 4
F UCREL1_11438 putative uv-damaged dna-binding protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F UCREL1_4006 putative dna repair protein K15082 RAD7; DNA repair protein RAD7
F UCREL1_4005 putative dna repair protein rad16 protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F UCREL1_1205 putative rna polymerase ii largest subunit protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F UCREL1_7799 putative dna-directed rna polymerase ii subunit rpb2 protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F UCREL1_9891 putative rna polymerase rpb4 protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F UCREL1_8824 putative dna-directed rna polymerases ii 24 kda polypeptide protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F UCREL1_9247 putative dna-directed rna polymerases i protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F UCREL1_7499 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F UCREL1_1430 putative dna-directed rna polymerases i ii iii subunit 10 protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F UCREL1_375 putative dna-directed rna polymerase ii subunit rpb11 protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F UCREL1_4451 putative metallothionein-i gene transcription activator protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F UCREL1_3121 putative ring-box protein 1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F UCREL1_10848 putative ubiquitin ligase subunit protein K10609 CUL4; cullin 4
F UCREL1_11438 putative uv-damaged dna-binding protein K10610 DDB1; DNA damage-binding protein 1
F UCREL1_7544 putative dna excision repair protein ercc-8 protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F UCREL1_11620 putative dna repair and recombination protein rad26 protein K10841 ERCC6; DNA excision repair protein ERCC-6
F UCREL1_11145 putative transcription elongation protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E UCREL1_1799 putative dna repair helicase rad25 protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E UCREL1_11571 putative dna repair helicase rad15 protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E UCREL1_931 putative tfiih p62 subunit domain-containing protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E UCREL1_9807 putative tfiih basal transcription factor complex p47 subunit protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E UCREL1_6123 putative rna polymerase ii transcription factor b subunit 4 protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E UCREL1_10829 putative rna polymerase ii transcription factor b subunit 2 protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E UCREL1_3159 putative serine threonine-protein kinase protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E UCREL1_4698 putative cyclin ccl1 protein K06634 CCNH; cyclin H
E UCREL1_1644 putative cdk-activating kinase assembly factor mat1 protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E UCREL1_8056 putative replication factor-a protein 1 protein K07466 RFA1; replication factor A1
E UCREL1_7028 putative replication protein a 32 kda subunit protein K10739 RFA2; replication factor A2
E UCREL1_5449 putative replication factor a protein 3 protein K10740 RPA3; replication factor A3
D Other NER factors
E UCREL1_1155 putative dna repair protein rad14 protein K10847 XPA; DNA-repair protein complementing XP-A cells
E UCREL1_2699 putative mating-type switching protein swi10 protein K10849 ERCC1; DNA excision repair protein ERCC-1
E UCREL1_8941 putative dna repair protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E UCREL1_3184 putative dna excision repair protein rad2 protein K10846 ERCC5; DNA excision repair protein ERCC-5
E UCREL1_546 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E UCREL1_4847 putative cullulin 3 protein K03869 CUL3; cullin 3
E UCREL1_4809 putative skp1 family protein K03872 ELOC; elongin-C
E UCREL1_3509 putative rna polymerase ii transcription factor siii subunit a protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E UCREL1_10471 putative dna mismatch repair protein msh-2 protein K08735 MSH2; DNA mismatch repair protein MSH2
E UCREL1_8915 putative dna mismatch repair protein msh3 protein K08736 MSH3; DNA mismatch repair protein MSH3
E UCREL1_7088 putative dna mismatch repair protein msh6 protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E UCREL1_1897 putative dna mismatch repair protein K08734 MLH1; DNA mismatch repair protein MLH1
E UCREL1_8204 putative dna mismatch repair protein K10858 PMS2; DNA mismatch repair protein PMS2
E UCREL1_2608 putative dna mismatch repair protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E UCREL1_220 putative dna polymerase delta catalytic subunit protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E UCREL1_370 putative dna polymerase delta small subunit protein K02328 POLD2; DNA polymerase delta subunit 2
E UCREL1_4138 putative dna polymerase subunit cdc27 protein K03504 POLD3; DNA polymerase delta subunit 3
E UCREL1_5998 putative dna polymerase delta protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E UCREL1_8056 putative replication factor-a protein 1 protein K07466 RFA1; replication factor A1
E UCREL1_7028 putative replication protein a 32 kda subunit protein K10739 RFA2; replication factor A2
E UCREL1_5449 putative replication factor a protein 3 protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E UCREL1_5844 putative replication factor rfc1 c terminal domain-containing protein K10754 RFC1; replication factor C subunit 1
E UCREL1_11509 putative activator 1 41 kda subunit protein K10755 RFC2_4; replication factor C subunit 2/4
E UCREL1_11696 putative activator 1 38 kda subunit protein K10756 RFC3_5; replication factor C subunit 3/5
E UCREL1_3443 putative replication factor c subunit 3 protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E UCREL1_1256 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen
E UCREL1_3201 putative exonuclease 1 protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E UCREL1_546 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E UCREL1_3815 putative wd repeat-containing protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E UCREL1_512 putative dna repair protein rad32 protein K10865 MRE11; double-strand break repair protein MRE11
E UCREL1_5409 putative rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E UCREL1_512 putative dna repair protein rad32 protein K10865 MRE11; double-strand break repair protein MRE11
E UCREL1_5409 putative rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E UCREL1_6622 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E UCREL1_6622 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51
E UCREL1_1039 putative dna repair protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E UCREL1_8548 putative rad52 dna repair protein radc protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E UCREL1_7726 putative dna repair and recombination protein rad54 protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
D Bloom's syndrome complex (BTR)
E UCREL1_4621 putative dna topoisomerase iii protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E UCREL1_10362 putative mediated genome instability protein rmi1 protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E UCREL1_8056 putative replication factor-a protein 1 protein K07466 RFA1; replication factor A1
E UCREL1_7028 putative replication protein a 32 kda subunit protein K10739 RFA2; replication factor A2
E UCREL1_5449 putative replication factor a protein 3 protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E UCREL1_2845 putative suppressor of mek1 protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E UCREL1_9044 putative structural maintenance of chromosome complex subunit protein K22803 SMC5; structural maintenance of chromosomes protein 5
E UCREL1_9785 putative dna repair protein K22804 SMC6; structural maintenance of chromosomes protein 6
E UCREL1_9627 putative dna repair protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E UCREL1_8214 putative chromosomal organization and dna repair protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E UCREL1_3307 putative nuclear protein qri2 protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E UCREL1_6112 putative ercc4 domain-containing protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E UCREL1_1712 putative crossover junction endonuclease mus81 protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E UCREL1_4442 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E UCREL1_8608 putative flap structure-specific endonuclease protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E UCREL1_8849 putative flap structure-specific endonuclease protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E UCREL1_10604 putative keratinolytic protein K11339 MORF4L1; mortality factor 4-like protein 1
E UCREL1_9786 putative aaa family atpase protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E UCREL1_9614 putative ku70 protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E UCREL1_4617 putative ku family dna protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E UCREL1_512 putative dna repair protein rad32 protein K10865 MRE11; double-strand break repair protein MRE11
E UCREL1_5409 putative rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E UCREL1_10106 putative dna ligase i protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E UCREL1_9418 putative atp-dependent dna ligase domain-containing protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E UCREL1_1947 putative dna polymerase beta protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
E UCREL1_1708 putative dna polymerase protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E UCREL1_4929 putative aprataxin-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E UCREL1_10739 putative artemis protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E UCREL1_2078 putative endonuclease exonuclease phosphatase family protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E UCREL1_10911 putative endonuclease exonuclease phosphatase family protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E UCREL1_3902 putative endonuclease exonuclease phosphatase family protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E UCREL1_5558 putative endonuclease exonuclease phosphatase family protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E UCREL1_4621 putative dna topoisomerase iii protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E UCREL1_10362 putative mediated genome instability protein rmi1 protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E UCREL1_6622 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51
E UCREL1_9847 putative telomere length regulation protein K11137 TELO2; telomere length regulation protein
E UCREL1_937 putative wd repeat-containing protein 5b protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E UCREL1_303 putative wd repeat domain-containing protein K23314 WRAP53; telomerase Cajal body protein 1
E UCREL1_8918 putative wd repeat-containing protein 70 protein K24752 WDR70; WD repeat-containing protein 70
E UCREL1_3815 putative wd repeat-containing protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D UCREL1_6540 putative dna polymerase iota protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D UCREL1_440 putative impb mucb samb family protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D UCREL1_10853 putative dna polymerase iv protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
C A-family DNA polymerase
C Rad6 epistasis group
D UCREL1_2448 putative ubiquitin-conjugating enzyme e2 2 protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D UCREL1_4137 putative dna repair protein rad18 protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D UCREL1_2359 putative dna repair protein rad5 protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D UCREL1_11605 putative rad5-like protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D UCREL1_7639 putative ubiquitin conjugating enzyme protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D UCREL1_1256 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen
D UCREL1_7715 putative hmg box-containing protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D UCREL1_2153 putative dna repair protein rad9 protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D UCREL1_154 putative checkpoint protein hus1 protein K10903 HUS1; HUS1 checkpoint protein
D UCREL1_8136 putative dna repair exonuclease rad1 protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D UCREL1_11509 putative activator 1 41 kda subunit protein K10755 RFC2_4; replication factor C subunit 2/4
D UCREL1_11696 putative activator 1 38 kda subunit protein K10756 RFC3_5; replication factor C subunit 3/5
D UCREL1_3443 putative replication factor c subunit 3 protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D UCREL1_8136 putative dna repair exonuclease rad1 protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D UCREL1_9407 putative topoisomerase 1-associated factor 1 protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D UCREL1_6038 putative chromosome segregation in meiosis protein 3 protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D UCREL1_6266 putative mrc1-like domain-containing protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D UCREL1_9847 putative telomere length regulation protein K11137 TELO2; telomere length regulation protein
C BAG6-UBL4A-GET4 complex
D UCREL1_11334 putative ubiquitin supergroup protein K23388 UBL4; ubiquitin-like protein 4
D UCREL1_9495 putative duf410 domain-containing protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D UCREL1_2635 putative protein kinase rad3 protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D UCREL1_5676 putative ataxia telangiectasia mutated protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D UCREL1_9719 putative serine threonine-protein kinase chk1 protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D UCREL1_4154 putative checkpoint kinase 2-like protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D UCREL1_3014 putative m-phase inducer phosphatase protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D UCREL1_1245 putative dna damage checkpoint protein rad24 protein K06630 YWHAE; 14-3-3 protein epsilon
D UCREL1_11014 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D UCREL1_2890 putative fork head domain-containing protein K24664 FKH; forkhead protein FKH
D UCREL1_5031 putative vacuolar sorting atpase protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D UCREL1_1756 putative ubiquitin family protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D UCREL1_3018 putative dna polymerase protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D UCREL1_7991 putative dna cross-link repair protein snm1 protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D UCREL1_2123 putative nuclease s1 protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D UCREL1_1128 putative dna excision repair protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D UCREL1_1980 putative cell cycle control protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D UCREL1_10903 putative pre-mrna-splicing factor cef-1 protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D UCREL1_6984 putative bcas2 family protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D UCREL1_3795 putative pre-mrna splicing protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D UCREL1_2728 putative nudix domain containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UCREL1_1254 putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UCREL1_2597 putative ribonucleoside-diphosphate reductase large chain protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D UCREL1_2515 putative ribonucleoside-diphosphate reductase small subunit protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
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AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D UCREL1_5984 putative ring-2 protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UCREL1_1319 putative deoxyribodipyrimidine photo-lyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E UCREL1_3974 putative uracil-dna glycosylase protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E UCREL1_4935 putative -gpd superfamily base excision dna repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E UCREL1_5901 putative a g-specific adenine glycosylase protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E UCREL1_5934 putative formamidopyrimidine-dna glycosylase protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E UCREL1_9365 putative dna repair protein ntg1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D UCREL1_2728 putative nudix domain containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UCREL1_1254 putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024