+D GENES KO
#
KEGG Orthology (KO) - Candidatus Johnevansia muelleri
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:eme00010]
D CEM_168 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CEM_033 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CEM_167 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CEM_212 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CEM_311 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CEM_312 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_032 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:eme00020]
D CEM_127 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CEM_128 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_131 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CEM_130 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CEM_125 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CEM_126 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CEM_123 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CEM_124 sdhD; Succinate dehydrogenase membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CEM_194 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CEM_203 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CEM_032 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CEM_311 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CEM_312 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:eme00030]
D CEM_033 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CEM_061 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CEM_284 gndA; Probable 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CEM_285 gndB; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CEM_176 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CEM_227 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CEM_028 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CEM_250 rpiA; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CEM_344 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
C 00040 Pentose and glucuronate interconversions
D CEM_176 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism
C 00052 Galactose metabolism
D CEM_168 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:eme00500]
D CEM_168 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CEM_033 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:eme00520]
D CEM_168 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CEM_033 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:eme00620]
D CEM_311 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CEM_312 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_228 Oxaloacetate decarboxylase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112]
D CEM_203 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CEM_194 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CEM_032 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CEM_034 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:eme00630]
D CEM_365 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:eme00640]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_130 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CEM_131 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:eme00650]
D CEM_125 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CEM_126 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CEM_123 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CEM_124 sdhD; Succinate dehydrogenase membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CEM_217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:eme00660]
D CEM_217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CEM_130 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CEM_131 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CEM_189 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CEM_188 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CEM_187 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:eme00190]
D CEM_260 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CEM_261 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CEM_262 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D CEM_263 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CEM_264 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CEM_265 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CEM_266 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CEM_267 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CEM_268 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CEM_269 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CEM_270 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CEM_271 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CEM_272 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CEM_125 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CEM_126 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CEM_123 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CEM_124 sdhD; Succinate dehydrogenase membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CEM_077 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CEM_076 cyoD; Ubiquinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D CEM_075 cyoC; Ubiquinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D CEM_074 cyoB; Ubiquinol oxidase subunit 1 K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D CEM_073 cyoA; Ubiquinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D CEM_241 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CEM_243 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CEM_242 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CEM_240 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CEM_244 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CEM_237 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CEM_239 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CEM_238 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:eme00710]
D CEM_167 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CEM_227 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CEM_250 rpiA; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CEM_176 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CEM_028 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CEM_032 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Other carbon fixation pathways [PATH:eme00720]
D CEM_194 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CEM_125 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CEM_126 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CEM_123 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CEM_124 sdhD; Succinate dehydrogenase membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CEM_131 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CEM_130 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CEM_331 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CEM_226 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00680 Methane metabolism [PATH:eme00680]
D CEM_365 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CEM_212 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism [PATH:eme00920]
D CEM_027 sqr; sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CEM_182 metZ; O-acetylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:eme00061]
D CEM_140 acpP; apo-[acyl carrier protein] K02078 acpP; acyl carrier protein
D CEM_141 fabF; Beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
C 00564 Glycerophospholipid metabolism
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:eme00230]
D CEM_344 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CEM_036 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
C 00240 Pyrimidine metabolism
D CEM_009 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CEM_008 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:eme00250]
D CEM_045 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CEM_275 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CEM_036 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CEM_175 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CEM_009 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CEM_008 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
C 00260 Glycine, serine and threonine metabolism [PATH:eme00260]
D CEM_207 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CEM_186 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CEM_025 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CEM_065 thrB; Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D CEM_026 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CEM_365 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_044 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CEM_043 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:eme00270]
D CEM_150 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CEM_207 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CEM_186 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CEM_025 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CEM_182 metZ; O-acetylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CEM_058 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00280 Valine, leucine and isoleucine degradation [PATH:eme00280]
D CEM_058 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:eme00290]
D CEM_189 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CEM_188 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CEM_187 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CEM_217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CEM_216 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CEM_031 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CEM_058 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CEM_034 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:eme00300]
D CEM_025 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CEM_207 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CEM_186 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CEM_310 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CEM_003 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CEM_047 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CEM_213 argD; Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CEM_046 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CEM_273 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CEM_274 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00310 Lysine degradation [PATH:eme00310]
D CEM_128 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:eme00220]
D CEM_245 arcB; Ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CEM_045 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CEM_275 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CEM_009 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CEM_008 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CEM_213 argD; Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:eme00330]
D CEM_175 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
C 00340 Histidine metabolism [PATH:eme00340]
D CEM_351 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CEM_054 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CEM_154 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CEM_016 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CEM_015 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CEM_017 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CEM_014 hisB; Histidine biosynthesis bifunctional protein HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CEM_019 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CEM_352 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism
D CEM_019 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism
D CEM_019 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D CEM_128 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:eme00400]
D CEM_144 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CEM_057 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CEM_020 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CEM_164 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CEM_056 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CEM_361 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CEM_190 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CEM_286 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CEM_287 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CEM_288 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CEM_184 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CEM_289 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CEM_044 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CEM_043 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CEM_360 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CEM_019 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:eme00450]
D CEM_150 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CEM_040 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CEM_195 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D CEM_365 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:eme00470]
D CEM_273 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CEM_274 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:eme00480]
D CEM_214 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CEM_284 gndA; Probable 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CEM_285 gndB; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CEM_061 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism
C 00740 Riboflavin metabolism
D CEM_157 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
C 00750 Vitamin B6 metabolism
D CEM_026 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism
C 00770 Pantothenate and CoA biosynthesis [PATH:eme00770]
D CEM_217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CEM_216 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CEM_031 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CEM_358 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CEM_058 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:eme00780]
D CEM_141 fabF; Beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
C 00785 Lipoic acid metabolism [PATH:eme00785]
D CEM_134 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CEM_135 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_311 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CEM_312 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CEM_127 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CEM_128 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:eme00790]
D CEM_183 folC; Bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:eme00670]
D CEM_331 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CEM_365 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CEM_166 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CEM_150 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CEM_226 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:eme00860]
D CEM_122 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CEM_064 cobA; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CEM_077 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CEM_068 cobI; Precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CEM_066 cobG; Precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D CEM_069 cobJ; Precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CEM_072 cobM; Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CEM_070 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CEM_042 cbiD; cobalt-precorrin-5B (C1)-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CEM_071 cobL; Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CEM_067 cobH; Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CEM_295 cobB; Cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CEM_293 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D CEM_062 btuR; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CEM_296 cobO; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CEM_292 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CEM_300 cobD; Cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CEM_299 cobP; Bifunctional adenosylcobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CEM_298 cobS; Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CEM_297 chlI; Magnesium-chelatase subunit ChlI K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CEM_227 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:eme00261]
D CEM_207 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CEM_186 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CEM_310 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CEM_003 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D CEM_168 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CEM_168 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D CEM_019 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CEM_286 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CEM_287 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CEM_140 acpP; apo-[acyl carrier protein] K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CEM_164 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:eme03020]
D CEM_087 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CEM_088 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CEM_119 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CEM_247 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:eme03010]
D CEM_362 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CEM_049 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CEM_100 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CEM_118 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CEM_111 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CEM_317 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CEM_090 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CEM_108 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CEM_355 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CEM_093 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CEM_117 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CEM_089 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CEM_116 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CEM_107 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CEM_257 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CEM_023 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CEM_103 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CEM_318 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CEM_098 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CEM_221 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CEM_322 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CEM_084 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CEM_097 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CEM_094 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CEM_095 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CEM_106 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CEM_109 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CEM_086 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CEM_085 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CEM_083 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CEM_354 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CEM_104 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CEM_113 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CEM_101 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CEM_120 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CEM_110 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CEM_024 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CEM_171 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CEM_224 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CEM_099 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CEM_096 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CEM_105 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CEM_343 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CEM_223 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CEM_304 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CEM_102 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CEM_055 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CEM_139 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CEM_305 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CEM_231 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CEM_172 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CEM_115 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CEM_004 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CEM_005 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CEM_308 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:eme00970]
D CEM_225 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CEM_205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CEM_246 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CEM_329 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CEM_290 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CEM_314 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CEM_198 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CEM_011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CEM_280 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CEM_079 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CEM_281 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CEM_328 tRNA-His K14226 tRNA-His; tRNA His
D CEM_307 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CEM_199 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_291 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_158 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_254 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_309 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CEM_340 tRNA-Met K14230 tRNA-Met; tRNA Met
D CEM_021 tRNA-Met K14230 tRNA-Met; tRNA Met
D CEM_201 tRNA-Met K14230 tRNA-Met; tRNA Met
D CEM_012 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CEM_330 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CEM_339 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CEM_206 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CEM_282 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CEM_080 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CEM_276 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CEM_010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CEM_081 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CEM_078 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CEM_193 tRNA-Val K14237 tRNA-Val; tRNA Val
D CEM_315 tRNA-Val K14237 tRNA-Val; tRNA Val
D CEM_122 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CEM_347 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CEM_346 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CEM_348 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CEM_333 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CEM_208 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CEM_335 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CEM_249 glyQ; Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CEM_248 glyS; Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CEM_174 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CEM_063 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CEM_332 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CEM_195 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CEM_166 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CEM_215 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CEM_132 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CEM_220 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CEM_302 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CEM_149 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CEM_162 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CEM_170 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CEM_169 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CEM_007 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CEM_306 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:eme03060]
D CEM_022 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CEM_303 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CEM_219 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D CEM_277 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:eme03018]
D CEM_212 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CEM_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CEM_363 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:eme03030]
D CEM_155 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CEM_052 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CEM_230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CEM_319 dnaB; DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CEM_323 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CEM_121 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CEM_156 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C 03410 Base excision repair
C 03420 Nucleotide excision repair
D CEM_136 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:eme03430]
D CEM_210 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CEM_035 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CEM_121 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CEM_052 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CEM_230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CEM_155 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03440 Homologous recombination [PATH:eme03440]
D CEM_121 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CEM_209 recA; Protein RecA K03553 recA; recombination protein RecA
D CEM_337 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CEM_181 recB; Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CEM_334 recC; Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D CEM_180 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CEM_052 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CEM_230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CEM_155 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:eme03070]
D CEM_303 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CEM_022 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:eme02024]
D CEM_286 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CEM_287 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CEM_144 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CEM_303 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CEM_022 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CEM_324 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CEM_212 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CEM_150 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:eme01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:eme01009]
D CEM_191 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:eme01002]
D CEM_219 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CEM_214 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CEM_046 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CEM_048 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CEM_253 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CEM_279 htpX; Heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CEM_327 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CEM_350 pmbA; Protein PmbA K03592 pmbA; PmbA protein
D CEM_349 tldD; Protein TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:eme01004]
D CEM_141 fabF; Beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:eme01006]
D CEM_077 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:eme01007]
D CEM_122 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CEM_333 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CEM_007 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CEM_306 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CEM_332 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CEM_195 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CEM_220 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CEM_215 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CEM_132 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CEM_302 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CEM_335 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CEM_162 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CEM_249 glyQ; Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CEM_248 glyS; Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CEM_063 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CEM_149 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CEM_174 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CEM_208 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CEM_170 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CEM_169 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CEM_019 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CEM_213 argD; Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CEM_058 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:eme00194]
D CEM_244 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CEM_243 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CEM_242 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CEM_241 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CEM_240 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CEM_239 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CEM_238 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CEM_237 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CEM_236 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:eme03000]
D CEM_175 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
C 03021 Transcription machinery [BR:eme03021]
D CEM_119 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CEM_087 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CEM_088 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CEM_247 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CEM_324 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
C 03019 Messenger RNA biogenesis [BR:eme03019]
D CEM_146 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CEM_212 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CEM_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CEM_363 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
C 03041 Spliceosome
C 03011 Ribosome [BR:eme03011]
D CEM_362 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CEM_049 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CEM_100 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CEM_118 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CEM_111 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CEM_317 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CEM_090 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CEM_108 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CEM_355 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CEM_093 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CEM_117 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CEM_089 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CEM_116 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CEM_107 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CEM_257 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CEM_023 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CEM_103 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CEM_318 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CEM_098 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CEM_221 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CEM_322 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CEM_084 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CEM_097 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CEM_094 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CEM_095 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CEM_106 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CEM_109 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CEM_085 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CEM_083 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CEM_086 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CEM_354 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CEM_104 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CEM_113 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CEM_101 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CEM_120 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CEM_110 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CEM_024 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CEM_171 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CEM_224 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CEM_099 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CEM_096 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CEM_105 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CEM_223 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CEM_304 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CEM_102 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CEM_055 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CEM_139 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CEM_305 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CEM_231 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CEM_172 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CEM_115 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CEM_343 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CEM_308 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CEM_004 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CEM_005 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:eme03009]
D CEM_146 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CEM_147 era; GTPase Era K03595 era; GTPase
D CEM_222 obg; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CEM_320 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CEM_357 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CEM_316 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CEM_251 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CEM_161 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CEM_137 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CEM_218 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CEM_252 yqgF; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CEM_163 der; GTPase Der K03977 engA; GTPase
D CEM_256 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CEM_133 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein
D CEM_178 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CEM_341 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D CEM_138 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:eme03016]
D CEM_122 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CEM_149 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CEM_220 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CEM_132 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CEM_195 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CEM_333 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CEM_302 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CEM_335 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CEM_208 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CEM_174 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CEM_063 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CEM_332 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CEM_215 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CEM_162 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CEM_170 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CEM_169 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CEM_007 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CEM_306 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CEM_259 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CEM_185 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CEM_233 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CEM_235 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CEM_232 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CEM_356 rnpB; Bacterial RNase P class A, RNA component K01978 rnpB; M1 RNA
D CEM_249 glyQ; Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CEM_248 glyS; Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CEM_202 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CEM_179 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CEM_177 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CEM_277 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CEM_160 iscA; Iron-binding protein iscA K13628 iscA; iron-sulfur cluster assembly protein
D CEM_325 ygfZ; tRNA-modifying protein ygfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D CEM_159 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CEM_053 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CEM_313 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CEM_321 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
C 03012 Translation factors [BR:eme03012]
D CEM_255 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CEM_173 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CEM_050 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CEM_092 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CEM_091 fusA; Elongation factor G K02355 fusA; elongation factor G
D CEM_345 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CEM_051 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D CEM_342 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CEM_278 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CEM_301 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:eme03110]
D CEM_326 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CEM_191 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D CEM_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CEM_363 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CEM_002 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CEM_369 grpE; Protein grpE K03687 GRPE; molecular chaperone GrpE
D CEM_364 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CEM_253 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CEM_237 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CEM_283 trx; Thioredoxin K03671 TXN; thioredoxin
D CEM_197 grxD; Glutaredoxin 4 K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:eme04131]
D CEM_167 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CEM_191 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:eme03051]
D CEM_191 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:eme03032]
D CEM_156 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CEM_319 dnaB; DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CEM_323 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CEM_121 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CEM_052 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CEM_230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CEM_155 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CEM_359 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CEM_229 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:eme03036]
D CEM_146 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CEM_353 yhcM; putative conserved protein with nucleoside triphosphate hydrolase domain K06916 zapE; cell division protein ZapE
D CEM_235 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
C 03400 DNA repair and recombination proteins [BR:eme03400]
D CEM_087 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CEM_088 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CEM_119 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CEM_247 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CEM_136 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CEM_210 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CEM_035 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CEM_052 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CEM_230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CEM_155 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CEM_121 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CEM_181 recB; Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CEM_334 recC; Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D CEM_180 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CEM_209 recA; Protein RecA K03553 recA; recombination protein RecA
D CEM_337 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CEM_018 radA; DNA repair and recombination protein RadA K04485 radA; DNA repair protein RadA/Sms
D CEM_359 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CEM_229 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03029 Mitochondrial biogenesis [BR:eme03029]
D CEM_255 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CEM_173 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CEM_050 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CEM_092 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CEM_091 fusA; Elongation factor G K02355 fusA; elongation factor G
D CEM_147 era; GTPase Era K03595 era; GTPase
D CEM_007 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CEM_132 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CEM_335 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CEM_347 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CEM_346 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CEM_348 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CEM_121 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CEM_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CEM_369 grpE; Protein grpE K03687 GRPE; molecular chaperone GrpE
D CEM_363 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CEM_364 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CEM_002 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CEM_197 grxD; Glutaredoxin 4 K07390 grxD; monothiol glutaredoxin
D CEM_077 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CEM_191 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:eme02000]
D CEM_038 sufC; Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CEM_060 galP; Galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D CEM_152 rhtA; Inner membrane transporter rhtA K11939 rhtA; inner membrane transporter RhtA
C 02044 Secretion system [BR:eme02044]
D CEM_022 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CEM_303 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins
C 04147 Exosome [BR:eme04147]
D CEM_191 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D CEM_212 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CEM_167 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CEM_363 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CEM_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CEM_033 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CEM_092 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CEM_275 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CEM_045 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CEM_129 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CEM_061 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
C 02048 Prokaryotic defense system [BR:eme02048]
D CEM_122 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CEM_200 Sdh5 super family related protein K09159 cptB; antitoxin CptB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:eme03100]
D CEM_225 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CEM_205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CEM_246 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CEM_329 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CEM_290 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CEM_314 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CEM_198 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CEM_011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CEM_280 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CEM_079 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CEM_281 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CEM_328 tRNA-His K14226 tRNA-His; tRNA His
D CEM_307 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CEM_199 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_291 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_158 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_254 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CEM_309 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CEM_340 tRNA-Met K14230 tRNA-Met; tRNA Met
D CEM_021 tRNA-Met K14230 tRNA-Met; tRNA Met
D CEM_201 tRNA-Met K14230 tRNA-Met; tRNA Met
D CEM_012 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CEM_330 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CEM_339 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CEM_206 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CEM_282 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CEM_080 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CEM_276 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CEM_010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CEM_081 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CEM_078 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CEM_193 tRNA-Val K14237 tRNA-Val; tRNA Val
D CEM_315 tRNA-Val K14237 tRNA-Val; tRNA Val
D CEM_004 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CEM_005 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CEM_308 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CEM_356 rnpB; Bacterial RNase P class A, RNA component K01978 rnpB; M1 RNA
D CEM_366 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CEM_029 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D CEM_258 fpr; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CEM_165 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CEM_196 rnfB; Electron transport complex protein rnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CEM_211 fdx; Ferredoxin K05524 fdxA; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CEM_192 cspA; Cold shock-like protein CspA K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D CEM_367 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CEM_151 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CEM_234 erpA; Putative iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D CEM_037 sufB; Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CEM_039 sufD; Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CEM_153 sufE; Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D CEM_204 yceA; rhodanase-domain containing protein YceA K07146 K07146; UPF0176 protein
C 99997 Function unknown
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#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024